AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1360020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360020 MtrunA17_Chr4g0062251 98.842 1209 14 0 1 1209 1 1209 0.0 2498
Msa1360020 MtrunA17_Chr8g0368691 68.197 1198 366 4 1 1184 1 1197 0.0 1737
Msa1360020 MtrunA17_Chr0c05g0492131 67.766 1182 372 5 6 1184 2 1177 0.0 1669
Msa1360020 MtrunA17_Chr3g0091611 67.532 1155 364 5 5 1156 2 1148 0.0 1640
Msa1360020 MtrunA17_Chr6g0450601 64.371 1176 396 8 1 1162 1 1167 0.0 1589
Msa1360020 MtrunA17_Chr2g0329991 56.436 1212 484 9 6 1187 8 1205 0.0 1400
Msa1360020 MtrunA17_Chr8g0342811 56.276 1219 487 11 1 1187 1 1205 0.0 1388
Msa1360020 MtrunA17_Chr5g0415271 45.350 1129 585 14 34 1153 20 1125 0.0 977
Msa1360020 MtrunA17_Chr8g0363911 45.785 1127 574 15 39 1153 44 1145 0.0 967
Msa1360020 MtrunA17_Chr3g0078371 35.982 1120 641 17 38 1142 120 1178 0.0 686
Msa1360020 MtrunA17_Chr7g0244991 36.183 1158 640 23 38 1142 142 1253 0.0 675
Msa1360020 MtrunA17_Chr8g0355251 36.930 1075 618 19 38 1095 69 1100 0.0 665
Msa1360020 MtrunA17_Chr2g0324791 33.333 1110 627 29 39 1134 3 1013 0.0 563
Msa1360020 MtrunA17_Chr8g0346461 25.424 590 310 20 417 980 358 843 2.41e-19 94.7
Msa1360020 MtrunA17_Chr8g0360751 55.000 60 24 1 71 130 5 61 6.81e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360020 AT1G68710.2 69.456 1195 353 6 1 1187 1 1191 0.0 1759
Msa1360020 AT1G68710.1 69.456 1195 353 6 1 1187 1 1191 0.0 1759
Msa1360020 AT1G68710.3 67.977 1221 353 7 1 1187 1 1217 0.0 1744
Msa1360020 AT3G25610.1 68.966 1189 362 6 10 1196 12 1195 0.0 1743
Msa1360020 AT1G13210.1 69.128 1192 358 7 1 1187 1 1187 0.0 1734
Msa1360020 AT1G26130.2 67.234 1175 380 4 4 1176 6 1177 0.0 1678
Msa1360020 AT1G26130.4 67.234 1175 380 4 4 1176 6 1177 0.0 1678
Msa1360020 AT1G26130.3 67.234 1175 380 4 4 1176 6 1177 0.0 1678
Msa1360020 AT1G26130.1 67.234 1175 379 5 4 1176 6 1176 0.0 1673
Msa1360020 AT3G27870.1 65.251 1154 388 7 1 1148 1 1147 0.0 1602
Msa1360020 AT3G13900.1 55.858 1212 483 11 12 1187 13 1208 0.0 1387
Msa1360020 AT1G17500.2 56.281 1210 495 9 1 1192 1 1194 0.0 1386
Msa1360020 AT1G17500.1 56.281 1210 495 9 1 1192 1 1194 0.0 1386
Msa1360020 AT3G27870.2 65.496 997 331 7 1 991 1 990 0.0 1373
Msa1360020 AT1G72700.1 55.029 1223 502 9 1 1192 1 1206 0.0 1372
Msa1360020 AT1G72700.3 55.029 1223 502 9 1 1192 1 1206 0.0 1372
Msa1360020 AT1G72700.2 55.029 1223 502 9 1 1192 1 1206 0.0 1372
Msa1360020 AT3G27870.3 66.528 962 310 6 193 1148 1 956 0.0 1364
Msa1360020 AT1G54280.2 54.959 1210 499 10 12 1187 13 1210 0.0 1360
Msa1360020 AT1G54280.3 54.959 1210 499 10 12 1187 13 1210 0.0 1360
Msa1360020 AT1G54280.1 54.959 1210 499 10 12 1187 13 1210 0.0 1360
Msa1360020 AT3G13900.2 57.608 953 353 10 12 928 13 950 0.0 1103
Msa1360020 AT3G13900.3 57.049 915 344 9 12 892 13 912 0.0 1043
Msa1360020 AT1G59820.1 45.536 1120 582 13 39 1153 36 1132 0.0 976
Msa1360020 AT5G04930.1 35.796 1137 622 24 38 1146 67 1123 0.0 673
Msa1360020 AT5G44240.1 32.920 1130 650 28 35 1155 31 1061 2.53e-179 559
Msa1360020 AT5G44240.2 32.948 1126 647 28 39 1155 3 1029 4.58e-179 557
Msa1360020 AT3G18700.1 60.317 63 23 2 944 1006 5 65 1.02e-12 68.2

Find 230 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTAAAGGGTTTAACTTTA+TGG 0.065768 tig0016871:+62436 Msa1360020:CDS
CATAAAGTTAAACCCTTTAA+TGG 0.137367 tig0016871:-62435 None:intergenic
TGTTGTGGTTGCTGCTACTA+TGG 0.168091 tig0016871:+60895 Msa1360020:CDS
AACAAAACAAAATTCGTATT+TGG 0.171130 tig0016871:-65471 None:intergenic
GTGCACCATCACCATCTTAT+TGG 0.185851 tig0016871:+65166 Msa1360020:CDS
GCATACCTTGAGACATAATT+TGG 0.195606 tig0016871:-64653 None:intergenic
GTTGTTGACTTTCAAGTTCT+TGG 0.205850 tig0016871:+64955 Msa1360020:CDS
CGATTCCAATATCTGCTTCT+TGG 0.229651 tig0016871:-64190 None:intergenic
AACATTGACTTGCAATTCTA+TGG 0.238060 tig0016871:+62265 Msa1360020:CDS
TAAACTCTAATACATTTAAA+AGG 0.238386 tig0016871:-62856 None:intergenic
TTTCTCAATCTTGCTTCTCT+TGG 0.239967 tig0016871:-61847 None:intergenic
TCTGATTCTTCAGGCAATTA+AGG 0.247624 tig0016871:+63890 Msa1360020:intron
CAGCAGCCTTTGCAACATTT+TGG 0.264638 tig0016871:-62400 None:intergenic
TTCACTTCCTGTTATTGCTT+TGG 0.267109 tig0016871:+64606 Msa1360020:CDS
AATCAAAACATTGGAGAAAA+TGG 0.267929 tig0016871:+63723 Msa1360020:CDS
TTAATGTTTGATTGAGTTAC+AGG 0.270132 tig0016871:-60202 None:intergenic
TTCAGCTGGAAAAGGATAAT+TGG 0.274822 tig0016871:+64841 Msa1360020:CDS
ACAAAACTTTCTGAAGGTTT+TGG 0.276116 tig0016871:+62511 Msa1360020:CDS
ATGGAGACAGCAATTAATAT+TGG 0.277027 tig0016871:+63548 Msa1360020:CDS
GAGAAGGATTTGATTCTTCT+TGG 0.277424 tig0016871:+63304 Msa1360020:CDS
TCTATTGGTGGTGTTGCTTA+TGG 0.279344 tig0016871:+62302 Msa1360020:CDS
GAAACAAAATCAACCATTAA+AGG 0.279580 tig0016871:+62422 Msa1360020:CDS
TCACTTCCTGTTATTGCTTT+GGG 0.282039 tig0016871:+64607 Msa1360020:CDS
CTTATTCCTTTCCATTTCAT+TGG 0.285699 tig0016871:+60450 Msa1360020:five_prime_UTR
CAAGATGAACATTCACTTAT+AGG 0.291644 tig0016871:+60635 Msa1360020:CDS
GTGGTTGCAGCCAGAGAATT+TGG 0.293311 tig0016871:+62620 Msa1360020:CDS
GGTATTGACCGGGGATAAAA+TGG 0.293752 tig0016871:+63529 Msa1360020:CDS
ACATACAACATTTATTCATA+TGG 0.294658 tig0016871:+65049 Msa1360020:CDS
CTCAAGCTTTCAAAATTTCA+AGG 0.298515 tig0016871:+61620 Msa1360020:CDS
GCAAATTTGTATGCATTTGT+AGG 0.300694 tig0016871:+61669 Msa1360020:CDS
CCATCCCAGTTTGACCAATA+TGG 0.312431 tig0016871:-60163 None:intergenic
TATATCAACAACTGCATATA+AGG 0.320534 tig0016871:+65128 Msa1360020:CDS
CATTCAAGTGCGGTTCTTCC+CGG 0.326217 tig0016871:+65245 Msa1360020:CDS
GCTAGTTTGTCAATGCATTC+AGG 0.326547 tig0016871:-63485 None:intergenic
CATGATACATGTTCAAATCT+TGG 0.329759 tig0016871:-62154 None:intergenic
TATGGTGTTGTGATCTTTAC+CGG 0.331219 tig0016871:+61783 Msa1360020:CDS
AGCCACCATATTGGTCAAAC+TGG 0.336040 tig0016871:+60158 Msa1360020:five_prime_UTR
CTAATTTCATGTTTGATTGA+AGG 0.339158 tig0016871:-62694 None:intergenic
AACTTTCAAATCCCTCCATT+TGG 0.339919 tig0016871:-61430 None:intergenic
GAATTTATCAAGTGTTCTAT+TGG 0.341007 tig0016871:+62287 Msa1360020:CDS
CCAGTTGCTTCATCAACTTC+AGG 0.344703 tig0016871:-62554 None:intergenic
ACAGCAGAATAAGGAGCAAT+AGG 0.356665 tig0016871:-60851 None:intergenic
AGCTATTTCACTTCATGAAT+TGG 0.363219 tig0016871:+62670 Msa1360020:CDS
CACAGGCTGGGATTAAGTTA+TGG 0.366620 tig0016871:+63507 Msa1360020:CDS
GGAAATATCTTTAGTACCTA+TGG 0.370683 tig0016871:+65422 Msa1360020:CDS
AAGAACCTTCACAACTTCAA+TGG 0.372757 tig0016871:-62114 None:intergenic
AATGCATACAAATTTGCGTT+TGG 0.374103 tig0016871:-61663 None:intergenic
TCAATCTTGCTTCTCTTGGA+TGG 0.377996 tig0016871:-61843 None:intergenic
CTCACCATATCACAAAATTC+AGG 0.378393 tig0016871:-65318 None:intergenic
ATGCTCCAAGAAGCAGATAT+TGG 0.386058 tig0016871:+64185 Msa1360020:CDS
ACATTGCTAACAGCAGAATA+AGG 0.386156 tig0016871:-60860 None:intergenic
CATACAACATTTATTCATAT+GGG 0.387591 tig0016871:+65050 Msa1360020:CDS
TTGGATGTCAAATCCATCAT+AGG 0.391264 tig0016871:+65509 Msa1360020:three_prime_UTR
AAAGGATCATGAATGGAAAC+TGG 0.391753 tig0016871:+62462 Msa1360020:CDS
CATGTTGAAAAGTCTAATAT+TGG 0.394333 tig0016871:+60134 Msa1360020:five_prime_UTR
ATTGAAGCAAACCAATGAAA+TGG 0.399442 tig0016871:-60461 None:intergenic
CTTCTTCTGCATTCGCGCGA+TGG 0.405623 tig0016871:+64903 Msa1360020:CDS
GGTAGTACAACTCTAGCTAT+TGG 0.405934 tig0016871:+64140 Msa1360020:CDS
AAACAAAATCAACCATTAAA+GGG 0.407307 tig0016871:+62423 Msa1360020:CDS
TGTTGATATAGAAGAATCTA+TGG 0.412392 tig0016871:-65115 None:intergenic
TAATACATTTAAAAGGTTGT+AGG 0.414006 tig0016871:-62849 None:intergenic
AAAACTCCCAAAGCAATAAC+AGG 0.417611 tig0016871:-64613 None:intergenic
TGGAGACAGCAATTAATATT+GGG 0.418327 tig0016871:+63549 Msa1360020:CDS
GCATTAGCTCTGATTATTGA+TGG 0.420012 tig0016871:+63978 Msa1360020:CDS
GGTTGGATTCACTGCTCGTT+TGG 0.424627 tig0016871:+65365 Msa1360020:CDS
ATGTCTAGTCTTTATACATA+TGG 0.425754 tig0016871:+60707 Msa1360020:CDS
ACAGGCTGGGATTAAGTTAT+GGG 0.432432 tig0016871:+63508 Msa1360020:CDS
ATGGAAACATACAACGAAAT+CGG 0.436550 tig0016871:-62095 None:intergenic
ACCATACTTTCTGATAAAAC+AGG 0.438851 tig0016871:+62242 Msa1360020:CDS
CTTGTGGTCTCTTACGATTA+CGG 0.439362 tig0016871:-62900 None:intergenic
TTGACAGCATTGATGTTGTA+TGG 0.439880 tig0016871:+62062 Msa1360020:CDS
AGTGTCATGTTTGAACTACT+TGG 0.440058 tig0016871:+63082 Msa1360020:intron
CAGCAGAATAAGGAGCAATA+GGG 0.443978 tig0016871:-60850 None:intergenic
AAAAGAATGTACACCTATGA+TGG 0.445349 tig0016871:-65522 None:intergenic
CTTCAGTATGTTCAGGCATA+AGG 0.450340 tig0016871:-61992 None:intergenic
GGTGGTGTTGCTTATGGAAG+AGG 0.451290 tig0016871:+62308 Msa1360020:CDS
CTTCGGTATTTGGACGAAGA+AGG 0.452576 tig0016871:+61938 Msa1360020:CDS
TTTGGTTATTGATTCTCTGC+AGG 0.456428 tig0016871:-65453 None:intergenic
AAATGGAGGGATTTGAAAGT+TGG 0.457247 tig0016871:+61432 Msa1360020:CDS
TTTGTAGGAAGTTTAGAGCT+TGG 0.460069 tig0016871:+61684 Msa1360020:CDS
TCTTAAACTAAAACAATCAC+TGG 0.461840 tig0016871:+61572 Msa1360020:CDS
AAGCAAGATTGAGAAAAGAA+TGG 0.463326 tig0016871:+61854 Msa1360020:CDS
AATTGTTCAAACAAAGACTT+AGG 0.465887 tig0016871:-60776 None:intergenic
TGTTATTCCTCTTCTTGTTG+TGG 0.467920 tig0016871:+60880 Msa1360020:CDS
GCTGCAAGTACTGCTTCATC+AGG 0.468188 tig0016871:-62026 None:intergenic
AGTTGGAGACATAGTGAAAG+TGG 0.468402 tig0016871:+61449 Msa1360020:CDS
GAAAGTAATATGAGATCAGC+AGG 0.470730 tig0016871:-61489 None:intergenic
CCTGAAGTTGATGAAGCAAC+TGG 0.471632 tig0016871:+62554 Msa1360020:CDS
AAATTCAAATCCAAATTCTC+TGG 0.475456 tig0016871:-62630 None:intergenic
ACTTACTCTTCAGCTGGAAA+AGG 0.476372 tig0016871:+64833 Msa1360020:CDS
GAGATCTATACCGCATTCTC+AGG 0.478742 tig0016871:+64532 Msa1360020:CDS
TACAAAACTTACTCTTCAGC+TGG 0.479758 tig0016871:+64827 Msa1360020:CDS
TCGAATTTGAACGAAGAACT+TGG 0.485219 tig0016871:+62209 Msa1360020:CDS
TCGATTCGTCATACAACGGT+TGG 0.495427 tig0016871:+65348 Msa1360020:CDS
TAGTAAACTTCAGTATGTTC+AGG 0.495605 tig0016871:-61999 None:intergenic
TTTATCAAGTGTTCTATTGG+TGG 0.495883 tig0016871:+62290 Msa1360020:CDS
AAAAGCACTTGTTACTAGAC+TGG 0.497916 tig0016871:+64103 Msa1360020:CDS
CGGGAAGAACCGCACTTGAA+TGG 0.498819 tig0016871:-65244 None:intergenic
ACCACAAAAGCAGCCTCATC+CGG 0.499036 tig0016871:-62602 None:intergenic
CTGGAAAAGGATAATTGGTT+GGG 0.501192 tig0016871:+64846 Msa1360020:CDS
CATTCACTTATAGGAGGACC+TGG 0.501356 tig0016871:+60644 Msa1360020:CDS
ATATGACTGGTGGAAGAAGA+AGG 0.502715 tig0016871:+60558 Msa1360020:exon
CGAAGCTGAATCACCGGATG+AGG 0.503472 tig0016871:+62589 Msa1360020:CDS
TACTTAGCAAAGGCGCTGAC+AGG 0.506533 tig0016871:+62936 Msa1360020:CDS
CTTCCCGGTGTATCATCAAA+TGG 0.507426 tig0016871:+65260 Msa1360020:CDS
TCAACCAAATCTAAAAGTTG+TGG 0.510608 tig0016871:-60514 None:intergenic
AACAACTAAGAAGTAAAAGT+TGG 0.512977 tig0016871:-60810 None:intergenic
ATAATTTGGAGGAGACATCT+TGG 0.514219 tig0016871:-64639 None:intergenic
GCTGGAAAAGGATAATTGGT+TGG 0.514680 tig0016871:+64845 Msa1360020:CDS
TCAAATCCCTCCATTTGGAC+TGG 0.515025 tig0016871:-61425 None:intergenic
ATTAAGTTATGGGTATTGAC+CGG 0.516370 tig0016871:+63518 Msa1360020:CDS
TTGAAGATAAACTACAAGAC+GGG 0.516777 tig0016871:+63338 Msa1360020:CDS
AAGTGATTGATAATGCCATT+TGG 0.517515 tig0016871:-65017 None:intergenic
CAGTGGTGTCGAAGGAATGC+AGG 0.518183 tig0016871:+64217 Msa1360020:CDS
ATGGTAGAATATGCGAAATA+CGG 0.519281 tig0016871:-65225 None:intergenic
AATATTGGTAGCCACCATAT+TGG 0.519662 tig0016871:+60149 Msa1360020:five_prime_UTR
CAAGAAGCAGATATTGGAAT+CGG 0.522135 tig0016871:+64191 Msa1360020:CDS
AAAGTAACAATCCAATAAGA+TGG 0.522691 tig0016871:-65177 None:intergenic
ATTAATGAATATGCTGACTC+TGG 0.524118 tig0016871:+63145 Msa1360020:CDS
TTCGATGTACGAGCATGTGC+TGG 0.525021 tig0016871:-62191 None:intergenic
GGTTTAACTTTATGGATGAA+AGG 0.525284 tig0016871:+62444 Msa1360020:CDS
CTTTGTTTGAACAATTCAGA+AGG 0.525612 tig0016871:+60783 Msa1360020:CDS
AATATGCTGACTCTGGTTTG+AGG 0.527796 tig0016871:+63152 Msa1360020:CDS
GCCAAGCTGCATACAATGAC+TGG 0.532341 tig0016871:+64554 Msa1360020:CDS
TACTTCTTGTGCATGGACAT+TGG 0.532635 tig0016871:+64291 Msa1360020:CDS
AATGGTACAATGGATAAGAA+AGG 0.534880 tig0016871:+65278 Msa1360020:CDS
GAAAAGATTCATATTTCAGT+CGG 0.534998 tig0016871:+62363 Msa1360020:CDS
AATCAAACATGAAATTAGAA+AGG 0.535413 tig0016871:+62699 Msa1360020:CDS
TTCATACGAAGCTGAATCAC+CGG 0.535577 tig0016871:+62583 Msa1360020:CDS
CATTAGCTCTGATTATTGAT+GGG 0.536630 tig0016871:+63979 Msa1360020:CDS
GTGAAAGTACATAGTGGAGA+TGG 0.537020 tig0016871:+61393 Msa1360020:CDS
TGTAATACAAAACTTTCTGA+AGG 0.537136 tig0016871:+62505 Msa1360020:CDS
ATATCTTTAGTACCTATGGA+TGG 0.539695 tig0016871:+65426 Msa1360020:CDS
ATGGATGAAAGGATCATGAA+TGG 0.541807 tig0016871:+62455 Msa1360020:CDS
TACTCCTGAAATCAAAACAT+TGG 0.541918 tig0016871:+63714 Msa1360020:CDS
CAGTGTACACATGCGTTGTG+TGG 0.542339 tig0016871:+64983 Msa1360020:CDS
TCTTTGAAAGAAGCAAATTG+AGG 0.543217 tig0016871:+65594 Msa1360020:three_prime_UTR
ATTGACAAACTAGCACAGGC+TGG 0.548641 tig0016871:+63494 Msa1360020:CDS
AAGTGTTGTTCAACAAATAA+CGG 0.550104 tig0016871:+63914 Msa1360020:CDS
CTCCTCCAAATTATGTCTCA+AGG 0.553675 tig0016871:+64648 Msa1360020:CDS
CTTCTGAACAATACAAGAGA+CGG 0.555075 tig0016871:-65622 None:intergenic
ATCTTGCTTCTCTTGGATGG+AGG 0.555389 tig0016871:-61840 None:intergenic
ACCAGTCATTGTATGCAGCT+TGG 0.558148 tig0016871:-64555 None:intergenic
GAACGCTTACTTCTTGTGCA+TGG 0.562953 tig0016871:+64284 Msa1360020:CDS
GCAGCAACCACAACAAGAAG+AGG 0.563396 tig0016871:-60887 None:intergenic
CTTTACCACATGAAAATGCA+TGG 0.566448 tig0016871:-60601 None:intergenic
GCAGAAGAAGAAGATAATTG+TGG 0.567309 tig0016871:-64890 None:intergenic
GGAGATGGTGCAAATGATGT+TGG 0.567615 tig0016871:+64161 Msa1360020:CDS
TTCTGAACAATACAAGAGAC+GGG 0.569300 tig0016871:-65621 None:intergenic
GTACAATGGATAAGAAAGGA+TGG 0.569467 tig0016871:+65282 Msa1360020:CDS
TTACAGAAGGATCTCATCAA+TGG 0.569495 tig0016871:+64316 Msa1360020:CDS
GTAGTAGTAGTTTCCCCTTG+TGG 0.571685 tig0016871:-62916 None:intergenic
CATAACCTTTGTATCGTGAC+CGG 0.571809 tig0016871:-61802 None:intergenic
AAAATGGAAGAATGAAGAGA+TGG 0.572483 tig0016871:+61967 Msa1360020:CDS
ATCGGTATCAGTGGTGTCGA+AGG 0.574345 tig0016871:+64209 Msa1360020:CDS
GTGTTTCTTGAACTTGCGAT+TGG 0.578892 tig0016871:+64041 Msa1360020:CDS
TTGACAAACTAGCACAGGCT+GGG 0.579621 tig0016871:+63495 Msa1360020:CDS
TGTACCATTTGATGATACAC+CGG 0.580747 tig0016871:-65264 None:intergenic
TCAACAAATAACGGAGGCAA+AGG 0.582308 tig0016871:+63923 Msa1360020:CDS
AGAAAAGTGAAAGTACATAG+TGG 0.582702 tig0016871:+61387 Msa1360020:CDS
GCTTGTAGTTTGCTTAGACA+AGG 0.583824 tig0016871:+63664 Msa1360020:CDS
ATAATTGGTTGGGCATTGAA+CGG 0.584291 tig0016871:+64856 Msa1360020:CDS
TTAAGTTATGGGTATTGACC+GGG 0.584387 tig0016871:+63519 Msa1360020:CDS
CATATTGCAAAACATTGAGA+AGG 0.586625 tig0016871:+63288 Msa1360020:CDS
AGCAAACCAATGAAATGGAA+AGG 0.588732 tig0016871:-60456 None:intergenic
TGTTTCCATTGAAGTTGTGA+AGG 0.589341 tig0016871:+62109 Msa1360020:CDS
TACCTTGAGACATAATTTGG+AGG 0.590241 tig0016871:-64650 None:intergenic
ATGCATTGACAAACTAGCAC+AGG 0.590563 tig0016871:+63490 Msa1360020:CDS
TTTGTTTGAACAATTCAGAA+GGG 0.590814 tig0016871:+60784 Msa1360020:CDS
TATCTTTAGTACCTATGGAT+GGG 0.591485 tig0016871:+65427 Msa1360020:CDS
CATTTGTACATATGTAAGTG+AGG 0.591539 tig0016871:+65566 Msa1360020:three_prime_UTR
AGTAACTGCTGAGGTGCAAG+TGG 0.591573 tig0016871:-61723 None:intergenic
CGTAATCGTAAGAGACCACA+AGG 0.591619 tig0016871:+62901 Msa1360020:CDS
GGACAAGTCTGCTGCTGAAG+CGG 0.592086 tig0016871:+63747 Msa1360020:CDS
GCCACCATATTGGTCAAACT+GGG 0.596025 tig0016871:+60159 Msa1360020:five_prime_UTR
AAATGACCAAAATGTTGCAA+AGG 0.599693 tig0016871:+62394 Msa1360020:CDS
AAACTAAAACAATCACTGGA+AGG 0.601223 tig0016871:+61576 Msa1360020:CDS
CATCAAGCATTTCGCGAAGG+CGG 0.601579 tig0016871:+64928 Msa1360020:CDS
GTACCATTTGATGATACACC+GGG 0.604815 tig0016871:-65263 None:intergenic
TTCCTCATCGAGTTCACGAT+AGG 0.605431 tig0016871:-63188 None:intergenic
CCATATTGGTCAAACTGGGA+TGG 0.606011 tig0016871:+60163 Msa1360020:five_prime_UTR
TGTATCATCAAATGGTACAA+TGG 0.607584 tig0016871:+65268 Msa1360020:CDS
ACAATCCAATAAGATGGTGA+TGG 0.607775 tig0016871:-65171 None:intergenic
ACAACTCTAGCTATTGGAGA+TGG 0.610032 tig0016871:+64146 Msa1360020:CDS
CTTTACCGGTCACGATACAA+AGG 0.611393 tig0016871:+61797 Msa1360020:CDS
CGCCTATCGTGAACTCGATG+AGG 0.615127 tig0016871:+63186 Msa1360020:CDS
ACACCTTCTTGATATAGTAG+TGG 0.617569 tig0016871:-64805 None:intergenic
GTGGGTGGTGAATTGCCAAA+TGG 0.617670 tig0016871:+65002 Msa1360020:CDS
AAAGGTTATGCAGAATTCAA+CGG 0.619307 tig0016871:+61815 Msa1360020:CDS
GAGATATCTAAATTGAGCAA+TGG 0.619414 tig0016871:-64261 None:intergenic
GATGAACATTCACTTATAGG+AGG 0.620288 tig0016871:+60638 Msa1360020:CDS
GTTGAAGATAAACTACAAGA+CGG 0.620454 tig0016871:+63337 Msa1360020:CDS
ATGGACATTGGTGTTACAGA+AGG 0.621470 tig0016871:+64303 Msa1360020:CDS
GAACTTGAAAGTCAACAACT+TGG 0.623849 tig0016871:-64951 None:intergenic
ATACAACATTTATTCATATG+GGG 0.624864 tig0016871:+65051 Msa1360020:CDS
GTACACATGCGTTGTGTGGG+TGG 0.626674 tig0016871:+64987 Msa1360020:CDS
AGATTGAGAAAAGAATGGAT+AGG 0.626770 tig0016871:+61859 Msa1360020:CDS
TTGTAGTTTATCTTCAACTG+CGG 0.627689 tig0016871:-63332 None:intergenic
TTTCCACTACTATATCAAGA+AGG 0.627703 tig0016871:+64802 Msa1360020:CDS
AGTGTACACATGCGTTGTGT+GGG 0.628561 tig0016871:+64984 Msa1360020:CDS
CAAAACATTGGAGAAAATGG+AGG 0.629806 tig0016871:+63726 Msa1360020:CDS
TCTGCAGGCTTCCCATCCAT+AGG 0.630273 tig0016871:-65438 None:intergenic
ATAGCTAGAGTTGTACTACC+AGG 0.635627 tig0016871:-64137 None:intergenic
TGCAGCTTGGCCTGAGAATG+CGG 0.637661 tig0016871:-64542 None:intergenic
AGACTGGTTAAGATGAGACC+TGG 0.640721 tig0016871:+64119 Msa1360020:CDS
TGCTGTCAAGAAATGCAGAA+TGG 0.640895 tig0016871:-62048 None:intergenic
GATATTGGAATCGGTATCAG+TGG 0.644422 tig0016871:+64200 Msa1360020:CDS
GTCGATACGATGAATCTCGA+CGG 0.650654 tig0016871:+61540 Msa1360020:CDS
GAAGAACAAAGTGAAGCCAA+AGG 0.653135 tig0016871:-64506 None:intergenic
TCCCAGTTTGACCAATATGG+TGG 0.653233 tig0016871:-60160 None:intergenic
AGATCAAGAGCAGATTGTAG+AGG 0.657379 tig0016871:+63264 Msa1360020:CDS
CATATTCTACCATTCAAGTG+CGG 0.658186 tig0016871:+65235 Msa1360020:CDS
AAACTACTACTACTTAGCAA+AGG 0.658793 tig0016871:+62926 Msa1360020:CDS
TATGGGGAAGCATTGTAATG+TGG 0.659915 tig0016871:+65067 Msa1360020:CDS
ACGGAAGCAATGCAGCAACA+AGG 0.661354 tig0016871:-65206 None:intergenic
GAGCATCAAGCATTTCGCGA+AGG 0.665155 tig0016871:+64925 Msa1360020:CDS
TAAGTTATGGGTATTGACCG+GGG 0.665514 tig0016871:+63520 Msa1360020:CDS
AAGGATCATGAATGGAAACT+GGG 0.675097 tig0016871:+62463 Msa1360020:CDS
AGATTTGAACATGTATCATG+AGG 0.675416 tig0016871:+62157 Msa1360020:CDS
CTATGGCTCCATATGCCATG+AGG 0.678736 tig0016871:-65098 None:intergenic
ATATGTATAAAGACTAGACA+TGG 0.682920 tig0016871:-60705 None:intergenic
TCTCTAAGAAGTAACTGCTG+AGG 0.683376 tig0016871:-61732 None:intergenic
AAAATCAGATAACAACTCTG+AGG 0.683827 tig0016871:+63956 Msa1360020:CDS
TAATCGTAAGAGACCACAAG+GGG 0.689832 tig0016871:+62903 Msa1360020:CDS
TGAAGATAAACTACAAGACG+GGG 0.696798 tig0016871:+63339 Msa1360020:CDS
TGACTGGTGGAAGAAGAAGG+AGG 0.742421 tig0016871:+60561 Msa1360020:CDS
TGTTGTTCAACAAATAACGG+AGG 0.744763 tig0016871:+63917 Msa1360020:CDS
AAGATCGATTCGTCATACAA+CGG 0.759238 tig0016871:+65344 Msa1360020:CDS
CACAACGCATGTGTACACTG+TGG 0.792593 tig0016871:-64980 None:intergenic
GTAATCGTAAGAGACCACAA+GGG 0.804409 tig0016871:+62902 Msa1360020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTCTTTTTATTAATTT+TGG + tig0016871:61893-61912 Msa1360020:CDS 10.0%
!! ATAAAAATTAGTTGAAATTA+AGG + tig0016871:64677-64696 Msa1360020:intron 10.0%
!! TAAAAATTAGTTGAAATTAA+GGG + tig0016871:64678-64697 Msa1360020:intron 10.0%
!! TAAACTCTAATACATTTAAA+AGG - tig0016871:62859-62878 None:intergenic 15.0%
!! TGAACTAAAATCAATTTAAT+TGG - tig0016871:63865-63884 None:intergenic 15.0%
!!! TGTTTTGTTTTTTTATTTGT+TGG + tig0016871:65490-65509 Msa1360020:three_prime_UTR 15.0%
!! AAAAATGAAACAAGAAACAA+AGG - tig0016871:60242-60261 None:intergenic 20.0%
!!! TTAAATTTTGAAGATATGAC+TGG + tig0016871:60545-60564 Msa1360020:exon 20.0%
!!! AGATTTTCAAAGAAAAAAAC+AGG + tig0016871:60934-60953 Msa1360020:CDS 20.0%
!!! AATTGTTGTATGATTTTATC+AGG + tig0016871:61347-61366 Msa1360020:intron 20.0%
!! AAACAAAATCAACCATTAAA+GGG + tig0016871:62423-62442 Msa1360020:CDS 20.0%
!!! TTTTGTATTACATTTGCATT+AGG - tig0016871:62497-62516 None:intergenic 20.0%
!!! TTGGATTTGAATTTTATGAA+AGG + tig0016871:62639-62658 Msa1360020:CDS 20.0%
!! AATCAAACATGAAATTAGAA+AGG + tig0016871:62699-62718 Msa1360020:CDS 20.0%
!! TAATACATTTAAAAGGTTGT+AGG - tig0016871:62852-62871 None:intergenic 20.0%
!! ACATACAACATTTATTCATA+TGG + tig0016871:65049-65068 Msa1360020:CDS 20.0%
!! CATACAACATTTATTCATAT+GGG + tig0016871:65050-65069 Msa1360020:CDS 20.0%
!! ATACAACATTTATTCATATG+GGG + tig0016871:65051-65070 Msa1360020:CDS 20.0%
!! AACAAAACAAAATTCGTATT+TGG - tig0016871:65474-65493 None:intergenic 20.0%
!! CAATATTAGACTTTTCAACA+TGG - tig0016871:60136-60155 None:intergenic 25.0%
! CATGTTGAAAAGTCTAATAT+TGG + tig0016871:60134-60153 Msa1360020:five_prime_UTR 25.0%
! TTAATGTTTGATTGAGTTAC+AGG - tig0016871:60205-60224 None:intergenic 25.0%
!! TTTTCTCTTGAAAAGATGAA+AGG - tig0016871:60294-60313 None:intergenic 25.0%
!!! AGCAAAAGTTAGTTTTTAGT+TGG + tig0016871:60405-60424 Msa1360020:five_prime_UTR 25.0%
!!! AAAGTTAGTTTTTAGTTGGT+TGG + tig0016871:60409-60428 Msa1360020:five_prime_UTR 25.0%
!! TAAACTTTTCTTGAAAATCC+AGG - tig0016871:60665-60684 None:intergenic 25.0%
! ATATGTATAAAGACTAGACA+TGG - tig0016871:60708-60727 None:intergenic 25.0%
!! ATGTCTAGTCTTTATACATA+TGG + tig0016871:60707-60726 Msa1360020:CDS 25.0%
! AATTGTTCAAACAAAGACTT+AGG - tig0016871:60779-60798 None:intergenic 25.0%
! TTTGTTTGAACAATTCAGAA+GGG + tig0016871:60784-60803 Msa1360020:CDS 25.0%
! AACAACTAAGAAGTAAAAGT+TGG - tig0016871:60813-60832 None:intergenic 25.0%
! ATTAAGCTGTTTATCCAAAA+AGG + tig0016871:61244-61263 Msa1360020:intron 25.0%
! TTAAGCTGTTTATCCAAAAA+GGG + tig0016871:61245-61264 Msa1360020:intron 25.0%
! TCTTAAACTAAAACAATCAC+TGG + tig0016871:61572-61591 Msa1360020:CDS 25.0%
!! AAGAACACAGATTTTATCTA+TGG + tig0016871:61765-61784 Msa1360020:CDS 25.0%
!!! TTAATTTTGGTTTCATTCGT+CGG + tig0016871:61906-61925 Msa1360020:CDS 25.0%
! ACGAAGAAGGATATTAAAAA+TGG + tig0016871:61951-61970 Msa1360020:CDS 25.0%
! GAATTTATCAAGTGTTCTAT+TGG + tig0016871:62287-62306 Msa1360020:CDS 25.0%
! GAAAAGATTCATATTTCAGT+CGG + tig0016871:62363-62382 Msa1360020:CDS 25.0%
! GAAACAAAATCAACCATTAA+AGG + tig0016871:62422-62441 Msa1360020:CDS 25.0%
! CATAAAGTTAAACCCTTTAA+TGG - tig0016871:62438-62457 None:intergenic 25.0%
!! CATTAAAGGGTTTAACTTTA+TGG + tig0016871:62436-62455 Msa1360020:CDS 25.0%
! TGTAATACAAAACTTTCTGA+AGG + tig0016871:62505-62524 Msa1360020:CDS 25.0%
! AAATTCAAATCCAAATTCTC+TGG - tig0016871:62633-62652 None:intergenic 25.0%
! CTAATTTCATGTTTGATTGA+AGG - tig0016871:62697-62716 None:intergenic 25.0%
! AACATGAAATTAGAAAGGTA+TGG + tig0016871:62704-62723 Msa1360020:intron 25.0%
!!! TCATTTGATTTCACATTTTC+AGG + tig0016871:62825-62844 Msa1360020:intron 25.0%
! ACTTTCGAAACAAAATCAAA+CGG - tig0016871:63021-63040 None:intergenic 25.0%
! TTTGAACTACTTGGAAAAAA+TGG + tig0016871:63091-63110 Msa1360020:CDS 25.0%
!!! AATAGTTCTATGTGTTGTTT+AGG + tig0016871:63460-63479 Msa1360020:intron 25.0%
!! ATAATAACATGTCACTGATT+AGG + tig0016871:63617-63636 Msa1360020:intron 25.0%
! AATCAAAACATTGGAGAAAA+TGG + tig0016871:63723-63742 Msa1360020:CDS 25.0%
!! AAGTGTTGTTCAACAAATAA+CGG + tig0016871:63914-63933 Msa1360020:CDS 25.0%
!! TTTTACAAGAATATCACCTT+TGG + tig0016871:64490-64509 Msa1360020:CDS 25.0%
! TGTTGATATAGAAGAATCTA+TGG - tig0016871:65118-65137 None:intergenic 25.0%
! TATATCAACAACTGCATATA+AGG + tig0016871:65128-65147 Msa1360020:CDS 25.0%
! AAAGTAACAATCCAATAAGA+TGG - tig0016871:65180-65199 None:intergenic 25.0%
! CTTTTTCTTTGTTCATGACT+TGG - tig0016871:60095-60114 None:intergenic 30.0%
! TAGACTTTTCAACATGGAAA+TGG - tig0016871:60130-60149 None:intergenic 30.0%
CTTATTCCTTTCCATTTCAT+TGG + tig0016871:60450-60469 Msa1360020:five_prime_UTR 30.0%
ATTGAAGCAAACCAATGAAA+TGG - tig0016871:60464-60483 None:intergenic 30.0%
! TTGTCCACAACTTTTAGATT+TGG + tig0016871:60510-60529 Msa1360020:five_prime_UTR 30.0%
TCAACCAAATCTAAAAGTTG+TGG - tig0016871:60517-60536 None:intergenic 30.0%
!! AATTTTGAAGATATGACTGG+TGG + tig0016871:60548-60567 Msa1360020:exon 30.0%
CAAGATGAACATTCACTTAT+AGG + tig0016871:60635-60654 Msa1360020:CDS 30.0%
! CTTTGTTTGAACAATTCAGA+AGG + tig0016871:60783-60802 Msa1360020:CDS 30.0%
ATTTCAGATTCAGAACTGTT+TGG + tig0016871:60978-60997 Msa1360020:intron 30.0%
! AATAGATCTTTGACCCTTTT+TGG - tig0016871:61261-61280 None:intergenic 30.0%
GTCAAAGATCTATTCAGATT+TGG + tig0016871:61267-61286 Msa1360020:intron 30.0%
! AGAAAAGTGAAAGTACATAG+TGG + tig0016871:61387-61406 Msa1360020:CDS 30.0%
AAACTAAAACAATCACTGGA+AGG + tig0016871:61576-61595 Msa1360020:CDS 30.0%
CTCAAGCTTTCAAAATTTCA+AGG + tig0016871:61620-61639 Msa1360020:CDS 30.0%
AATGCATACAAATTTGCGTT+TGG - tig0016871:61666-61685 None:intergenic 30.0%
GCAAATTTGTATGCATTTGT+AGG + tig0016871:61669-61688 Msa1360020:CDS 30.0%
AAAGGTTATGCAGAATTCAA+CGG + tig0016871:61815-61834 Msa1360020:CDS 30.0%
AAGCAAGATTGAGAAAAGAA+TGG + tig0016871:61854-61873 Msa1360020:CDS 30.0%
AGATTGAGAAAAGAATGGAT+AGG + tig0016871:61859-61878 Msa1360020:CDS 30.0%
! GTTCAATTTTCTTCGGTATT+TGG + tig0016871:61928-61947 Msa1360020:CDS 30.0%
AAAATGGAAGAATGAAGAGA+TGG + tig0016871:61967-61986 Msa1360020:CDS 30.0%
TAGTAAACTTCAGTATGTTC+AGG - tig0016871:62002-62021 None:intergenic 30.0%
ATGGAAACATACAACGAAAT+CGG - tig0016871:62098-62117 None:intergenic 30.0%
CATGATACATGTTCAAATCT+TGG - tig0016871:62157-62176 None:intergenic 30.0%
AGATTTGAACATGTATCATG+AGG + tig0016871:62157-62176 Msa1360020:CDS 30.0%
ACCATACTTTCTGATAAAAC+AGG + tig0016871:62242-62261 Msa1360020:CDS 30.0%
! TCCTGTTTTATCAGAAAGTA+TGG - tig0016871:62246-62265 None:intergenic 30.0%
!! AACATTGACTTGCAATTCTA+TGG + tig0016871:62265-62284 Msa1360020:CDS 30.0%
TTTATCAAGTGTTCTATTGG+TGG + tig0016871:62290-62309 Msa1360020:CDS 30.0%
AAATGACCAAAATGTTGCAA+AGG + tig0016871:62394-62413 Msa1360020:CDS 30.0%
! GGTTTAACTTTATGGATGAA+AGG + tig0016871:62444-62463 Msa1360020:CDS 30.0%
!! ACAAAACTTTCTGAAGGTTT+TGG + tig0016871:62511-62530 Msa1360020:CDS 30.0%
! AGCTATTTCACTTCATGAAT+TGG + tig0016871:62670-62689 Msa1360020:CDS 30.0%
GTACAAGACATCAGAAAATT+AGG - tig0016871:62765-62784 None:intergenic 30.0%
AAACTACTACTACTTAGCAA+AGG + tig0016871:62926-62945 Msa1360020:CDS 30.0%
AACTACTTGGAAAAAATGGA+AGG + tig0016871:63095-63114 Msa1360020:CDS 30.0%
ACTACTTGGAAAAAATGGAA+GGG + tig0016871:63096-63115 Msa1360020:CDS 30.0%
!! ATTAATGAATATGCTGACTC+TGG + tig0016871:63145-63164 Msa1360020:CDS 30.0%
CATATTGCAAAACATTGAGA+AGG + tig0016871:63288-63307 Msa1360020:CDS 30.0%
TTGTAGTTTATCTTCAACTG+CGG - tig0016871:63335-63354 None:intergenic 30.0%
GTTGAAGATAAACTACAAGA+CGG + tig0016871:63337-63356 Msa1360020:CDS 30.0%
TTGAAGATAAACTACAAGAC+GGG + tig0016871:63338-63357 Msa1360020:CDS 30.0%
! CTGCTTGAAAAATTTGAAAC+CGG - tig0016871:63378-63397 None:intergenic 30.0%
!! ATTAAGTTATGGGTATTGAC+CGG + tig0016871:63518-63537 Msa1360020:CDS 30.0%
ATGGAGACAGCAATTAATAT+TGG + tig0016871:63548-63567 Msa1360020:CDS 30.0%
TGGAGACAGCAATTAATATT+GGG + tig0016871:63549-63568 Msa1360020:CDS 30.0%
TACTCCTGAAATCAAAACAT+TGG + tig0016871:63714-63733 Msa1360020:CDS 30.0%
!!! TTCTCCAATGTTTTGATTTC+AGG - tig0016871:63721-63740 None:intergenic 30.0%
TTCAATCTTTCTGATTCTTC+AGG + tig0016871:63881-63900 Msa1360020:intron 30.0%
AAAATCAGATAACAACTCTG+AGG + tig0016871:63956-63975 Msa1360020:CDS 30.0%
!! CATTAGCTCTGATTATTGAT+GGG + tig0016871:63979-63998 Msa1360020:CDS 30.0%
!! GTAACAAGTGCTTTTTGTTT+TGG - tig0016871:64098-64117 None:intergenic 30.0%
GAGATATCTAAATTGAGCAA+TGG - tig0016871:64264-64283 None:intergenic 30.0%
TTTCCACTACTATATCAAGA+AGG + tig0016871:64802-64821 Msa1360020:CDS 30.0%
!! AAGTGATTGATAATGCCATT+TGG - tig0016871:65020-65039 None:intergenic 30.0%
ATGGTAGAATATGCGAAATA+CGG - tig0016871:65228-65247 None:intergenic 30.0%
TGTATCATCAAATGGTACAA+TGG + tig0016871:65268-65287 Msa1360020:CDS 30.0%
AATGGTACAATGGATAAGAA+AGG + tig0016871:65278-65297 Msa1360020:CDS 30.0%
! TGATCCTGAATTTTGTGATA+TGG + tig0016871:65314-65333 Msa1360020:CDS 30.0%
GGAAATATCTTTAGTACCTA+TGG + tig0016871:65422-65441 Msa1360020:CDS 30.0%
ATATCTTTAGTACCTATGGA+TGG + tig0016871:65426-65445 Msa1360020:CDS 30.0%
TATCTTTAGTACCTATGGAT+GGG + tig0016871:65427-65446 Msa1360020:CDS 30.0%
AAAAGAATGTACACCTATGA+TGG - tig0016871:65525-65544 None:intergenic 30.0%
! TAGGTGTACATTCTTTTCAT+AGG + tig0016871:65528-65547 Msa1360020:three_prime_UTR 30.0%
CATTTGTACATATGTAAGTG+AGG + tig0016871:65566-65585 Msa1360020:three_prime_UTR 30.0%
! TCTTTGAAAGAAGCAAATTG+AGG + tig0016871:65594-65613 Msa1360020:three_prime_UTR 30.0%
! AATATTGGTAGCCACCATAT+TGG + tig0016871:60149-60168 Msa1360020:five_prime_UTR 35.0%
AGCAAACCAATGAAATGGAA+AGG - tig0016871:60459-60478 None:intergenic 35.0%
! AAGATCCATGCATTTTCATG+TGG + tig0016871:60596-60615 Msa1360020:CDS 35.0%
CTTTACCACATGAAAATGCA+TGG - tig0016871:60604-60623 None:intergenic 35.0%
GATGAACATTCACTTATAGG+AGG + tig0016871:60638-60657 Msa1360020:CDS 35.0%
ACATTGCTAACAGCAGAATA+AGG - tig0016871:60863-60882 None:intergenic 35.0%
TGTTATTCCTCTTCTTGTTG+TGG + tig0016871:60880-60899 Msa1360020:CDS 35.0%
AGGTTGTTTAGGAGAAGTTA+TGG + tig0016871:61042-61061 Msa1360020:intron 35.0%
!! GTGTTTTTAACCAGTCCAAA+TGG + tig0016871:61415-61434 Msa1360020:CDS 35.0%
! TTTTTAACCAGTCCAAATGG+AGG + tig0016871:61418-61437 Msa1360020:CDS 35.0%
! TTTTAACCAGTCCAAATGGA+GGG + tig0016871:61419-61438 Msa1360020:CDS 35.0%
AACTTTCAAATCCCTCCATT+TGG - tig0016871:61433-61452 None:intergenic 35.0%
AAATGGAGGGATTTGAAAGT+TGG + tig0016871:61432-61451 Msa1360020:CDS 35.0%
GAAAGTAATATGAGATCAGC+AGG - tig0016871:61492-61511 None:intergenic 35.0%
! TTTGTAGGAAGTTTAGAGCT+TGG + tig0016871:61684-61703 Msa1360020:CDS 35.0%
!! TATGGTGTTGTGATCTTTAC+CGG + tig0016871:61783-61802 Msa1360020:CDS 35.0%
TTTCTCAATCTTGCTTCTCT+TGG - tig0016871:61850-61869 None:intergenic 35.0%
!!! TTCGTCGGTTCAATTTTCTT+CGG + tig0016871:61921-61940 Msa1360020:CDS 35.0%
!! TTGACAGCATTGATGTTGTA+TGG + tig0016871:62062-62081 Msa1360020:CDS 35.0%
TGTTTCCATTGAAGTTGTGA+AGG + tig0016871:62109-62128 Msa1360020:CDS 35.0%
AAGAACCTTCACAACTTCAA+TGG - tig0016871:62117-62136 None:intergenic 35.0%
TCGAATTTGAACGAAGAACT+TGG + tig0016871:62209-62228 Msa1360020:CDS 35.0%
ATGGATGAAAGGATCATGAA+TGG + tig0016871:62455-62474 Msa1360020:CDS 35.0%
AAAGGATCATGAATGGAAAC+TGG + tig0016871:62462-62481 Msa1360020:CDS 35.0%
AAGGATCATGAATGGAAACT+GGG + tig0016871:62463-62482 Msa1360020:CDS 35.0%
!! AGAAAACAAAGCGTTGCATT+AGG - tig0016871:62976-62995 None:intergenic 35.0%
AGTGTCATGTTTGAACTACT+TGG + tig0016871:63082-63101 Msa1360020:intron 35.0%
GAGAAGGATTTGATTCTTCT+TGG + tig0016871:63304-63323 Msa1360020:CDS 35.0%
TGAAGATAAACTACAAGACG+GGG + tig0016871:63339-63358 Msa1360020:CDS 35.0%
ACGGGGTATGTTATAAATAC+CGG + tig0016871:63356-63375 Msa1360020:intron 35.0%
!! TTAAGTTATGGGTATTGACC+GGG + tig0016871:63519-63538 Msa1360020:CDS 35.0%
CAAAACATTGGAGAAAATGG+AGG + tig0016871:63726-63745 Msa1360020:CDS 35.0%
TCTGATTCTTCAGGCAATTA+AGG + tig0016871:63890-63909 Msa1360020:intron 35.0%
TGTTGTTCAACAAATAACGG+AGG + tig0016871:63917-63936 Msa1360020:CDS 35.0%
!! GCATTAGCTCTGATTATTGA+TGG + tig0016871:63978-63997 Msa1360020:CDS 35.0%
!! AAAAGCACTTGTTACTAGAC+TGG + tig0016871:64103-64122 Msa1360020:CDS 35.0%
CAAGAAGCAGATATTGGAAT+CGG + tig0016871:64191-64210 Msa1360020:CDS 35.0%
TTACAGAAGGATCTCATCAA+TGG + tig0016871:64316-64335 Msa1360020:CDS 35.0%
TTCACTTCCTGTTATTGCTT+TGG + tig0016871:64606-64625 Msa1360020:CDS 35.0%
TCACTTCCTGTTATTGCTTT+GGG + tig0016871:64607-64626 Msa1360020:CDS 35.0%
AAAACTCCCAAAGCAATAAC+AGG - tig0016871:64616-64635 None:intergenic 35.0%
ATAATTTGGAGGAGACATCT+TGG - tig0016871:64642-64661 None:intergenic 35.0%
TACCTTGAGACATAATTTGG+AGG - tig0016871:64653-64672 None:intergenic 35.0%
GCATACCTTGAGACATAATT+TGG - tig0016871:64656-64675 None:intergenic 35.0%
ACACCTTCTTGATATAGTAG+TGG - tig0016871:64808-64827 None:intergenic 35.0%
TACAAAACTTACTCTTCAGC+TGG + tig0016871:64827-64846 Msa1360020:CDS 35.0%
TTCAGCTGGAAAAGGATAAT+TGG + tig0016871:64841-64860 Msa1360020:CDS 35.0%
CTGGAAAAGGATAATTGGTT+GGG + tig0016871:64846-64865 Msa1360020:CDS 35.0%
!! ATAATTGGTTGGGCATTGAA+CGG + tig0016871:64856-64875 Msa1360020:CDS 35.0%
GCAGAAGAAGAAGATAATTG+TGG - tig0016871:64893-64912 None:intergenic 35.0%
GAACTTGAAAGTCAACAACT+TGG - tig0016871:64954-64973 None:intergenic 35.0%
!! GTTGTTGACTTTCAAGTTCT+TGG + tig0016871:64955-64974 Msa1360020:CDS 35.0%
ACAATCCAATAAGATGGTGA+TGG - tig0016871:65174-65193 None:intergenic 35.0%
CATATTCTACCATTCAAGTG+CGG + tig0016871:65235-65254 Msa1360020:CDS 35.0%
! TGTACCATTTGATGATACAC+CGG - tig0016871:65267-65286 None:intergenic 35.0%
GTACAATGGATAAGAAAGGA+TGG + tig0016871:65282-65301 Msa1360020:CDS 35.0%
CTCACCATATCACAAAATTC+AGG - tig0016871:65321-65340 None:intergenic 35.0%
!! AAGATCGATTCGTCATACAA+CGG + tig0016871:65344-65363 Msa1360020:CDS 35.0%
!! TTTGGTTATTGATTCTCTGC+AGG - tig0016871:65456-65475 None:intergenic 35.0%
TTGGATGTCAAATCCATCAT+AGG + tig0016871:65509-65528 Msa1360020:three_prime_UTR 35.0%
TTCTGAACAATACAAGAGAC+GGG - tig0016871:65624-65643 None:intergenic 35.0%
CTTCTGAACAATACAAGAGA+CGG - tig0016871:65625-65644 None:intergenic 35.0%
ATATGACTGGTGGAAGAAGA+AGG + tig0016871:60558-60577 Msa1360020:exon 40.0%
CAGCAGAATAAGGAGCAATA+GGG - tig0016871:60853-60872 None:intergenic 40.0%
ACAGCAGAATAAGGAGCAAT+AGG - tig0016871:60854-60873 None:intergenic 40.0%
AACTGACATAAGCACTTGTG+AGG + tig0016871:61022-61041 Msa1360020:intron 40.0%
AAGCACTTGTGAGGTTGTTT+AGG + tig0016871:61031-61050 Msa1360020:intron 40.0%
! GCTGCTTTCATAAGCTATCA+TGG - tig0016871:61121-61140 None:intergenic 40.0%
! GTGAAAGTACATAGTGGAGA+TGG + tig0016871:61393-61412 Msa1360020:CDS 40.0%
AGTTGGAGACATAGTGAAAG+TGG + tig0016871:61449-61468 Msa1360020:CDS 40.0%
! TCTCTAAGAAGTAACTGCTG+AGG - tig0016871:61735-61754 None:intergenic 40.0%
CATAACCTTTGTATCGTGAC+CGG - tig0016871:61805-61824 None:intergenic 40.0%
TCAATCTTGCTTCTCTTGGA+TGG - tig0016871:61846-61865 None:intergenic 40.0%
CTTCAGTATGTTCAGGCATA+AGG - tig0016871:61995-62014 None:intergenic 40.0%
TGCTGTCAAGAAATGCAGAA+TGG - tig0016871:62051-62070 None:intergenic 40.0%
!! TCTATTGGTGGTGTTGCTTA+TGG + tig0016871:62302-62321 Msa1360020:CDS 40.0%
TTCATACGAAGCTGAATCAC+CGG + tig0016871:62583-62602 Msa1360020:CDS 40.0%
CTTGTGGTCTCTTACGATTA+CGG - tig0016871:62903-62922 None:intergenic 40.0%
GTAATCGTAAGAGACCACAA+GGG + tig0016871:62902-62921 Msa1360020:CDS 40.0%
TAATCGTAAGAGACCACAAG+GGG + tig0016871:62903-62922 Msa1360020:CDS 40.0%
!! AATATGCTGACTCTGGTTTG+AGG + tig0016871:63152-63171 Msa1360020:CDS 40.0%
AGATCAAGAGCAGATTGTAG+AGG + tig0016871:63264-63283 Msa1360020:CDS 40.0%
! GCTAGTTTGTCAATGCATTC+AGG - tig0016871:63488-63507 None:intergenic 40.0%
! ATGCATTGACAAACTAGCAC+AGG + tig0016871:63490-63509 Msa1360020:CDS 40.0%
ACAGGCTGGGATTAAGTTAT+GGG + tig0016871:63508-63527 Msa1360020:CDS 40.0%
!! TAAGTTATGGGTATTGACCG+GGG + tig0016871:63520-63539 Msa1360020:CDS 40.0%
!! GCTTGTAGTTTGCTTAGACA+AGG + tig0016871:63664-63683 Msa1360020:CDS 40.0%
! TCAACAAATAACGGAGGCAA+AGG + tig0016871:63923-63942 Msa1360020:CDS 40.0%
GTGTTTCTTGAACTTGCGAT+TGG + tig0016871:64041-64060 Msa1360020:CDS 40.0%
ATAGCTAGAGTTGTACTACC+AGG - tig0016871:64140-64159 None:intergenic 40.0%
GGTAGTACAACTCTAGCTAT+TGG + tig0016871:64140-64159 Msa1360020:CDS 40.0%
ACAACTCTAGCTATTGGAGA+TGG + tig0016871:64146-64165 Msa1360020:CDS 40.0%
ATGCTCCAAGAAGCAGATAT+TGG + tig0016871:64185-64204 Msa1360020:CDS 40.0%
CGATTCCAATATCTGCTTCT+TGG - tig0016871:64193-64212 None:intergenic 40.0%
GATATTGGAATCGGTATCAG+TGG + tig0016871:64200-64219 Msa1360020:CDS 40.0%
TACTTCTTGTGCATGGACAT+TGG + tig0016871:64291-64310 Msa1360020:CDS 40.0%
!! ATGGACATTGGTGTTACAGA+AGG + tig0016871:64303-64322 Msa1360020:CDS 40.0%
GAAGAACAAAGTGAAGCCAA+AGG - tig0016871:64509-64528 None:intergenic 40.0%
CTCCTCCAAATTATGTCTCA+AGG + tig0016871:64648-64667 Msa1360020:CDS 40.0%
ATTTCCTGCATTTGCAGACA+AGG + tig0016871:64730-64749 Msa1360020:intron 40.0%
ACTTACTCTTCAGCTGGAAA+AGG + tig0016871:64833-64852 Msa1360020:CDS 40.0%
GCTGGAAAAGGATAATTGGT+TGG + tig0016871:64845-64864 Msa1360020:CDS 40.0%
! AATGTGGTACGTTTTCCTCA+TGG + tig0016871:65083-65102 Msa1360020:CDS 40.0%
! TACGTTTTCCTCATGGCATA+TGG + tig0016871:65090-65109 Msa1360020:CDS 40.0%
! GTACCATTTGATGATACACC+GGG - tig0016871:65266-65285 None:intergenic 40.0%
!!! TTTTGAAGCGTCTAGACGTT+CGG + tig0016871:65401-65420 Msa1360020:CDS 40.0%
AGCCACCATATTGGTCAAAC+TGG + tig0016871:60158-60177 Msa1360020:five_prime_UTR 45.0%
GCCACCATATTGGTCAAACT+GGG + tig0016871:60159-60178 Msa1360020:five_prime_UTR 45.0%
TCCCAGTTTGACCAATATGG+TGG - tig0016871:60163-60182 None:intergenic 45.0%
CCATCCCAGTTTGACCAATA+TGG - tig0016871:60166-60185 None:intergenic 45.0%
CCATATTGGTCAAACTGGGA+TGG + tig0016871:60163-60182 Msa1360020:five_prime_UTR 45.0%
CATTCACTTATAGGAGGACC+TGG + tig0016871:60644-60663 Msa1360020:CDS 45.0%
TGTTGTGGTTGCTGCTACTA+TGG + tig0016871:60895-60914 Msa1360020:CDS 45.0%
TCAAATCCCTCCATTTGGAC+TGG - tig0016871:61428-61447 None:intergenic 45.0%
GTCGATACGATGAATCTCGA+CGG + tig0016871:61540-61559 Msa1360020:CDS 45.0%
CTTTACCGGTCACGATACAA+AGG + tig0016871:61797-61816 Msa1360020:CDS 45.0%
ATCTTGCTTCTCTTGGATGG+AGG - tig0016871:61843-61862 None:intergenic 45.0%
CTTCGGTATTTGGACGAAGA+AGG + tig0016871:61938-61957 Msa1360020:CDS 45.0%
! CAGCAGCCTTTGCAACATTT+TGG - tig0016871:62403-62422 None:intergenic 45.0%
CCAGTTGCTTCATCAACTTC+AGG - tig0016871:62557-62576 None:intergenic 45.0%
!! CCTGAAGTTGATGAAGCAAC+TGG + tig0016871:62554-62573 Msa1360020:CDS 45.0%
CGTAATCGTAAGAGACCACA+AGG + tig0016871:62901-62920 Msa1360020:CDS 45.0%
GTAGTAGTAGTTTCCCCTTG+TGG - tig0016871:62919-62938 None:intergenic 45.0%
TTCCTCATCGAGTTCACGAT+AGG - tig0016871:63191-63210 None:intergenic 45.0%
ATTGACAAACTAGCACAGGC+TGG + tig0016871:63494-63513 Msa1360020:CDS 45.0%
TTGACAAACTAGCACAGGCT+GGG + tig0016871:63495-63514 Msa1360020:CDS 45.0%
CACAGGCTGGGATTAAGTTA+TGG + tig0016871:63507-63526 Msa1360020:CDS 45.0%
!! GGTATTGACCGGGGATAAAA+TGG + tig0016871:63529-63548 Msa1360020:CDS 45.0%
! TGCTGTCTCCATTTTATCCC+CGG - tig0016871:63540-63559 None:intergenic 45.0%
ACAAGCAAATCTGCAGTCAC+AGG - tig0016871:63650-63669 None:intergenic 45.0%
! AGACTGGTTAAGATGAGACC+TGG + tig0016871:64119-64138 Msa1360020:CDS 45.0%
GGAGATGGTGCAAATGATGT+TGG + tig0016871:64161-64180 Msa1360020:CDS 45.0%
GAACGCTTACTTCTTGTGCA+TGG + tig0016871:64284-64303 Msa1360020:CDS 45.0%
ACATAAGTGAAGACGTGACG+AGG - tig0016871:64348-64367 None:intergenic 45.0%
GAGATCTATACCGCATTCTC+AGG + tig0016871:64532-64551 Msa1360020:CDS 45.0%
ACCAGTCATTGTATGCAGCT+TGG - tig0016871:64558-64577 None:intergenic 45.0%
TAGTCCTTGTCTGCAAATGC+AGG - tig0016871:64737-64756 None:intergenic 45.0%
AGTGTACACATGCGTTGTGT+GGG + tig0016871:64984-65003 Msa1360020:CDS 45.0%
GTGCACCATCACCATCTTAT+TGG + tig0016871:65166-65185 Msa1360020:CDS 45.0%
CTTCCCGGTGTATCATCAAA+TGG + tig0016871:65260-65279 Msa1360020:CDS 45.0%
! TCGATTCGTCATACAACGGT+TGG + tig0016871:65348-65367 Msa1360020:CDS 45.0%
TGACTGGTGGAAGAAGAAGG+AGG + tig0016871:60561-60580 Msa1360020:CDS 50.0%
GCAGCAACCACAACAAGAAG+AGG - tig0016871:60890-60909 None:intergenic 50.0%
AGTAACTGCTGAGGTGCAAG+TGG - tig0016871:61726-61745 None:intergenic 50.0%
! GCTGCAAGTACTGCTTCATC+AGG - tig0016871:62029-62048 None:intergenic 50.0%
TTCGATGTACGAGCATGTGC+TGG - tig0016871:62194-62213 None:intergenic 50.0%
!! GGTGGTGTTGCTTATGGAAG+AGG + tig0016871:62308-62327 Msa1360020:CDS 50.0%
ACCACAAAAGCAGCCTCATC+CGG - tig0016871:62605-62624 None:intergenic 50.0%
GTGGTTGCAGCCAGAGAATT+TGG + tig0016871:62620-62639 Msa1360020:CDS 50.0%
!! TACTTAGCAAAGGCGCTGAC+AGG + tig0016871:62936-62955 Msa1360020:CDS 50.0%
! ATCGGTATCAGTGGTGTCGA+AGG + tig0016871:64209-64228 Msa1360020:CDS 50.0%
GCCAAGCTGCATACAATGAC+TGG + tig0016871:64554-64573 Msa1360020:CDS 50.0%
GAGCATCAAGCATTTCGCGA+AGG + tig0016871:64925-64944 Msa1360020:CDS 50.0%
CATCAAGCATTTCGCGAAGG+CGG + tig0016871:64928-64947 Msa1360020:CDS 50.0%
CACAACGCATGTGTACACTG+TGG - tig0016871:64983-65002 None:intergenic 50.0%
CAGTGTACACATGCGTTGTG+TGG + tig0016871:64983-65002 Msa1360020:CDS 50.0%
GTGGGTGGTGAATTGCCAAA+TGG + tig0016871:65002-65021 Msa1360020:CDS 50.0%
CTATGGCTCCATATGCCATG+AGG - tig0016871:65101-65120 None:intergenic 50.0%
ACGGAAGCAATGCAGCAACA+AGG - tig0016871:65209-65228 None:intergenic 50.0%
CATTCAAGTGCGGTTCTTCC+CGG + tig0016871:65245-65264 Msa1360020:CDS 50.0%
GGTTGGATTCACTGCTCGTT+TGG + tig0016871:65365-65384 Msa1360020:CDS 50.0%
CGAAGCTGAATCACCGGATG+AGG + tig0016871:62589-62608 Msa1360020:CDS 55.0%
!!! ACCGGATGAGGCTGCTTTTG+TGG + tig0016871:62601-62620 Msa1360020:CDS 55.0%
CGCCTATCGTGAACTCGATG+AGG + tig0016871:63186-63205 Msa1360020:CDS 55.0%
GGACAAGTCTGCTGCTGAAG+CGG + tig0016871:63747-63766 Msa1360020:CDS 55.0%
! CAGTGGTGTCGAAGGAATGC+AGG + tig0016871:64217-64236 Msa1360020:CDS 55.0%
TGCAGCTTGGCCTGAGAATG+CGG - tig0016871:64545-64564 None:intergenic 55.0%
CTTCTTCTGCATTCGCGCGA+TGG + tig0016871:64903-64922 Msa1360020:CDS 55.0%
GTACACATGCGTTGTGTGGG+TGG + tig0016871:64987-65006 Msa1360020:CDS 55.0%
CGGGAAGAACCGCACTTGAA+TGG - tig0016871:65247-65266 None:intergenic 55.0%
TCTGCAGGCTTCCCATCCAT+AGG - tig0016871:65441-65460 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
tig0016871 gene 60082 65689 60082 ID=Msa1360020;Name=Msa1360020
tig0016871 mRNA 60082 65689 60082 ID=Msa1360020-mRNA-1;Parent=Msa1360020;Name=Msa1360020-mRNA-1;_AED=0.05;_eAED=0.05;_QI=478|1|1|1|1|1|9|219|1209
tig0016871 exon 60082 60955 60082 ID=Msa1360020-mRNA-1:exon:11662;Parent=Msa1360020-mRNA-1
tig0016871 exon 61369 62720 61369 ID=Msa1360020-mRNA-1:exon:11663;Parent=Msa1360020-mRNA-1
tig0016871 exon 62847 62957 62847 ID=Msa1360020-mRNA-1:exon:11664;Parent=Msa1360020-mRNA-1
tig0016871 exon 63084 63360 63084 ID=Msa1360020-mRNA-1:exon:11665;Parent=Msa1360020-mRNA-1
tig0016871 exon 63482 63570 63482 ID=Msa1360020-mRNA-1:exon:11666;Parent=Msa1360020-mRNA-1
tig0016871 exon 63660 63768 63660 ID=Msa1360020-mRNA-1:exon:11667;Parent=Msa1360020-mRNA-1
tig0016871 exon 63903 64337 63903 ID=Msa1360020-mRNA-1:exon:11668;Parent=Msa1360020-mRNA-1
tig0016871 exon 64478 64669 64478 ID=Msa1360020-mRNA-1:exon:11669;Parent=Msa1360020-mRNA-1
tig0016871 exon 64802 65689 64802 ID=Msa1360020-mRNA-1:exon:11670;Parent=Msa1360020-mRNA-1
tig0016871 five_prime_UTR 60082 60559 60082 ID=Msa1360020-mRNA-1:five_prime_utr;Parent=Msa1360020-mRNA-1
tig0016871 CDS 60560 60955 60560 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 61369 62720 61369 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 62847 62957 62847 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 63084 63360 63084 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 63482 63570 63482 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 63660 63768 63660 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 63903 64337 63903 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 64478 64669 64478 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 CDS 64802 65470 64802 ID=Msa1360020-mRNA-1:cds;Parent=Msa1360020-mRNA-1
tig0016871 three_prime_UTR 65471 65689 65471 ID=Msa1360020-mRNA-1:three_prime_utr;Parent=Msa1360020-mRNA-1
Gene Sequence

>Msa1360020

ATGACTGGTGGAAGAAGAAGGAGGCATCACTTCAGTAAGATCCATGCATTTTCATGTGGTAAAGCATCAATGAAACAAGATGAACATTCACTTATAGGAGGACCTGGATTTTCAAGAAAAGTTTATTGCAATGATGCAGAACGTGCCATGTCTAGTCTTTATACATATGGTGATAATTATGTTAGAACTACTAAGTATACAGTTGCTACTTTTCTACCTAAGTCTTTGTTTGAACAATTCAGAAGGGTTGCCAACTTTTACTTCTTAGTTGTTGCAATTTTGTCTTTCTTCCCTATTGCTCCTTATTCTGCTGTTAGCAATGTTATTCCTCTTCTTGTTGTGGTTGCTGCTACTATGGCTAAAGAATTCATTGAAGATTTTCAAAGAAAAAAACAGGATATAGAGATGAATAACAGAAAAGTGAAAGTACATAGTGGAGATGGTGTTTTTAACCAGTCCAAATGGAGGGATTTGAAAGTTGGAGACATAGTGAAAGTGGAAAAAGATGAGTATTTTCCTGCTGATCTCATATTACTTTCATCAAACTATGAAGAAGCAATTTGCTATGTCGATACGATGAATCTCGACGGAGAAACAAATCTTAAACTAAAACAATCACTGGAAGGAACTTCAAATTTGCAAGAAGACTCAAGCTTTCAAAATTTCAAGGCTGTCATAAGATGCGAAGATCCAAACGCAAATTTGTATGCATTTGTAGGAAGTTTAGAGCTTGGAGATGATCAACAATATCCACTTGCACCTCAGCAGTTACTTCTTAGAGACTCTAAGCTGAAGAACACAGATTTTATCTATGGTGTTGTGATCTTTACCGGTCACGATACAAAGGTTATGCAGAATTCAACGGATCCTCCATCCAAGAGAAGCAAGATTGAGAAAAGAATGGATAGGATTATATACTGTTTGTTCTTTTTATTAATTTTGGTTTCATTCGTCGGTTCAATTTTCTTCGGTATTTGGACGAAGAAGGATATTAAAAATGGAAGAATGAAGAGATGGTACCTTATGCCTGAACATACTGAAGTTTACTATGATCCTGATGAAGCAGTACTTGCAGCCATTCTGCATTTCTTGACAGCATTGATGTTGTATGGTTACTTTATTCCGATTTCGTTGTATGTTTCCATTGAAGTTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAAGATTTGAACATGTATCATGAGGAAACTGATAAGCCAGCACATGCTCGTACATCGAATTTGAACGAAGAACTTGGTCAAGTTGATACCATACTTTCTGATAAAACAGGAACATTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGGTGGTGTTGCTTATGGAAGAGGTTTTACAGAAGTTGAGAGAGCTATATCAAAGAGAAAAGATTCATATTTCAGTCGGAAAATGAAAAATGACCAAAATGTTGCAAAGGCTGCTGAAACAAAATCAACCATTAAAGGGTTTAACTTTATGGATGAAAGGATCATGAATGGAAACTGGGTGAGACAACCTAATGCAAATGTAATACAAAACTTTCTGAAGGTTTTGGCTGTATGTCATACTGCAATACCTGAAGTTGATGAAGCAACTGGTAAAATTTCATACGAAGCTGAATCACCGGATGAGGCTGCTTTTGTGGTTGCAGCCAGAGAATTTGGATTTGAATTTTATGAAAGGTCACATGCAGCTATTTCACTTCATGAATTGGACCTTCAATCAAACATGAAATTAGAAAGGTCCTACAACCTTTTAAATGTATTAGAGTTTAGTAGTGCACGAAAGAGAATGTCCGTAATCGTAAGAGACCACAAGGGGAAACTACTACTACTTAGCAAAGGCGCTGACAGTGTCATGTTTGAACTACTTGGAAAAAATGGAAGGGAGTTTGAAGAGCAGACTAAGTATCACATTAATGAATATGCTGACTCTGGTTTGAGGACTTTGATACTCGCCTATCGTGAACTCGATGAGGAAGAGTACAAGCAATTTAATAAAGAGTTGACAGACGCTAAAAACTTAGTTAGTGCAGATCAAGAGCAGATTGTAGAGGACATATTGCAAAACATTGAGAAGGATTTGATTCTTCTTGGTGCTACCGCAGTTGAAGATAAACTACAAGACGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCTGGGATTAAGTTATGGGTATTGACCGGGGATAAAATGGAGACAGCAATTAATATTGGATTTGCTTGTAGTTTGCTTAGACAAGGAATGAAACAAATTATCATTAATTCAGATACTCCTGAAATCAAAACATTGGAGAAAATGGAGGACAAGTCTGCTGCTGAAGCGGCAATTAAGGCAAGTGTTGTTCAACAAATAACGGAGGCAAAGGCGTTACTTTCAAAATCAGATAACAACTCTGAGGCATTAGCTCTGATTATTGATGGGAAGTCTCTTGCTTATGCGCTAGAAGACGATGTAAAGAACGTGTTTCTTGAACTTGCGATTGGTTGCGCGTCTGTTATATGTTGTCGTTCGTCTCCAAAACAAAAAGCACTTGTTACTAGACTGGTTAAGATGAGACCTGGTAGTACAACTCTAGCTATTGGAGATGGTGCAAATGATGTTGGTATGCTCCAAGAAGCAGATATTGGAATCGGTATCAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATCGCCATTGCTCAATTTAGATATCTCGAACGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCATCAATGATCTGCTACTTCTTTTACAAGAATATCACCTTTGGCTTCACTTTGTTCTTCTATGAGATCTATACCGCATTCTCAGGCCAAGCTGCATACAATGACTGGTTCATGTCATTTTATAATGTATTCTTCACTTCACTTCCTGTTATTGCTTTGGGAGTTTTTGACCAAGATGTCTCCTCCAAATTATGTCTCAAGTTTCCACTACTATATCAAGAAGGTGTACAAAACTTACTCTTCAGCTGGAAAAGGATAATTGGTTGGGCATTGAACGGAGTAGCAAGTTCCACAATTATCTTCTTCTTCTGCATTCGCGCGATGGAGCATCAAGCATTTCGCGAAGGCGGCCAAGTTGTTGACTTTCAAGTTCTTGGTGCCACAGTGTACACATGCGTTGTGTGGGTGGTGAATTGCCAAATGGCATTATCAATCACTTACTTTACATACATACAACATTTATTCATATGGGGAAGCATTGTAATGTGGTACGTTTTCCTCATGGCATATGGAGCCATAGATTCTTCTATATCAACAACTGCATATAAGGTCTTCACTGAAGCATGTGCACCATCACCATCTTATTGGATTGTTACTTTGCTTGTCCTTGTTGCTGCATTGCTTCCGTATTTCGCATATTCTACCATTCAAGTGCGGTTCTTCCCGGTGTATCATCAAATGGTACAATGGATAAGAAAGGATGGACAAGTAAATGATCCTGAATTTTGTGATATGGTGAGACAAAGATCGATTCGTCATACAACGGTTGGATTCACTGCTCGTTTGGAAGCTTCTAGACGTTTTGAAGCGTCTAGACGTTCGGAAATATCTTTAGTACCTATGGATGGGAAGCCTGCAGAGAATCAATAA
Protein sequence

>Msa1360020

MTGGRRRRHHFSKIHAFSCGKASMKQDEHSLIGGPGFSRKVYCNDAERAMSSLYTYGDNYVRTTKYTVATFLPKSLFEQFRRVANFYFLVVAILSFFPIAPYSAVSNVIPLLVVVAATMAKEFIEDFQRKKQDIEMNNRKVKVHSGDGVFNQSKWRDLKVGDIVKVEKDEYFPADLILLSSNYEEAICYVDTMNLDGETNLKLKQSLEGTSNLQEDSSFQNFKAVIRCEDPNANLYAFVGSLELGDDQQYPLAPQQLLLRDSKLKNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDRIIYCLFFLLILVSFVGSIFFGIWTKKDIKNGRMKRWYLMPEHTEVYYDPDEAVLAAILHFLTALMLYGYFIPISLYVSIEVVKVLQSIFINQDLNMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGRGFTEVERAISKRKDSYFSRKMKNDQNVAKAAETKSTIKGFNFMDERIMNGNWVRQPNANVIQNFLKVLAVCHTAIPEVDEATGKISYEAESPDEAAFVVAAREFGFEFYERSHAAISLHELDLQSNMKLERSYNLLNVLEFSSARKRMSVIVRDHKGKLLLLSKGADSVMFELLGKNGREFEEQTKYHINEYADSGLRTLILAYRELDEEEYKQFNKELTDAKNLVSADQEQIVEDILQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPEIKTLEKMEDKSAAEAAIKASVVQQITEAKALLSKSDNNSEALALIIDGKSLAYALEDDVKNVFLELAIGCASVICCRSSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEIYTAFSGQAAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNLLFSWKRIIGWALNGVASSTIIFFFCIRAMEHQAFREGGQVVDFQVLGATVYTCVVWVVNCQMALSITYFTYIQHLFIWGSIVMWYVFLMAYGAIDSSISTTAYKVFTEACAPSPSYWIVTLLVLVAALLPYFAYSTIQVRFFPVYHQMVQWIRKDGQVNDPEFCDMVRQRSIRHTTVGFTARLEASRRFEASRRSEISLVPMDGKPAENQ*