Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269810 | XP_003596635.1 | 93.182 | 220 | 11 | 1 | 1 | 220 | 1 | 216 | 1.06e-144 | 412 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269810 | sp|O48915|NDR1_ARATH | 41.905 | 210 | 114 | 5 | 8 | 213 | 13 | 218 | 4.91e-46 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269810 | G7IJL6 | 93.182 | 220 | 11 | 1 | 1 | 220 | 1 | 216 | 5.04e-145 | 412 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004790 | Msa0269810 | -0.800874 | 1.174520e-48 | -8.615850e-47 |
| Msa0010890 | Msa0269810 | 0.813861 | 2.065911e-51 | -8.615850e-47 |
| Msa0013050 | Msa0269810 | -0.802955 | 4.387654e-49 | -8.615850e-47 |
| Msa0029850 | Msa0269810 | 0.802331 | 5.901895e-49 | -8.615850e-47 |
| Msa0032330 | Msa0269810 | 0.802359 | 5.824194e-49 | -8.615850e-47 |
| Msa0038720 | Msa0269810 | 0.820192 | 7.809641e-53 | -8.615850e-47 |
| Msa0039330 | Msa0269810 | 0.832622 | 8.509254e-56 | -8.615850e-47 |
| Msa0059070 | Msa0269810 | 0.800452 | 1.431548e-48 | -8.615850e-47 |
| Msa0077450 | Msa0269810 | 0.802996 | 4.302996e-49 | -8.615850e-47 |
| Msa0078660 | Msa0269810 | 0.800590 | 1.342212e-48 | -8.615850e-47 |
| Msa0085290 | Msa0269810 | 0.850638 | 1.492386e-60 | -8.615850e-47 |
| Msa0100090 | Msa0269810 | 0.825576 | 4.348258e-54 | -8.615850e-47 |
| Msa0105070 | Msa0269810 | 0.817148 | 3.832270e-52 | -8.615850e-47 |
| Msa0115270 | Msa0269810 | 0.816766 | 4.670189e-52 | -8.615850e-47 |
| Msa0131770 | Msa0269810 | 0.814409 | 1.563921e-51 | -8.615850e-47 |
| Msa0133980 | Msa0269810 | -0.800889 | 1.165855e-48 | -8.615850e-47 |
| Msa0134110 | Msa0269810 | -0.804856 | 1.767037e-49 | -8.615850e-47 |
| Msa0169140 | Msa0269810 | -0.808415 | 3.132043e-50 | -8.615850e-47 |
| Msa0169820 | Msa0269810 | 0.821368 | 4.190596e-53 | -8.615850e-47 |
| Msa0170140 | Msa0269810 | 0.818733 | 1.679857e-52 | -8.615850e-47 |
| Msa0172780 | Msa0269810 | 0.807297 | 5.415470e-50 | -8.615850e-47 |
| Msa0178930 | Msa0269810 | 0.822762 | 1.991497e-53 | -8.615850e-47 |
| Msa0180990 | Msa0269810 | -0.808969 | 2.384497e-50 | -8.615850e-47 |
| Msa0187830 | Msa0269810 | 0.826952 | 2.045219e-54 | -8.615850e-47 |
| Msa0197660 | Msa0269810 | 0.829450 | 5.112364e-55 | -8.615850e-47 |
| Msa0201530 | Msa0269810 | 0.805432 | 1.338781e-49 | -8.615850e-47 |
| Msa0202580 | Msa0269810 | 0.822912 | 1.837277e-53 | -8.615850e-47 |
| Msa0212310 | Msa0269810 | 0.805187 | 1.506425e-49 | -8.615850e-47 |
| Msa0215320 | Msa0269810 | -0.822383 | 2.439997e-53 | -8.615850e-47 |
| Msa0223410 | Msa0269810 | -0.800152 | 1.647998e-48 | -8.615850e-47 |
| Msa0229380 | Msa0269810 | 0.808744 | 2.665068e-50 | -8.615850e-47 |
| Msa0229590 | Msa0269810 | 0.809592 | 1.753547e-50 | -8.615850e-47 |
| Msa0239800 | Msa0269810 | 0.826516 | 2.598841e-54 | -8.615850e-47 |
| Msa0244140 | Msa0269810 | 0.821358 | 4.213852e-53 | -8.615850e-47 |
| Msa0244190 | Msa0269810 | 0.837070 | 6.457260e-57 | -8.615850e-47 |
| Msa0245540 | Msa0269810 | 0.814332 | 1.625791e-51 | -8.615850e-47 |
| Msa0269810 | Msa0277820 | 0.804373 | 2.228782e-49 | -8.615850e-47 |
| Msa0269810 | Msa0282720 | 0.817126 | 3.876179e-52 | -8.615850e-47 |
| Msa0269810 | Msa0305190 | 0.830963 | 2.184060e-55 | -8.615850e-47 |
| Msa0269810 | Msa0317290 | 0.800769 | 1.233731e-48 | -8.615850e-47 |
| Msa0269810 | Msa0317510 | 0.830257 | 3.251168e-55 | -8.615850e-47 |
| Msa0269810 | Msa0319170 | 0.812120 | 4.975520e-51 | -8.615850e-47 |
| Msa0269810 | Msa0321080 | 0.808096 | 3.662274e-50 | -8.615850e-47 |
| Msa0269810 | Msa0340450 | 0.851387 | 9.172771e-61 | -8.615850e-47 |
| Msa0269810 | Msa0340690 | 0.801189 | 1.012425e-48 | -8.615850e-47 |
| Msa0269810 | Msa0344690 | -0.817752 | 2.802244e-52 | -8.615850e-47 |
| Msa0269810 | Msa0344830 | 0.810915 | 9.088182e-51 | -8.615850e-47 |
| Msa0269810 | Msa0347750 | 0.807640 | 4.579836e-50 | -8.615850e-47 |
| Msa0269810 | Msa0350990 | 0.819988 | 8.696346e-53 | -8.615850e-47 |
| Msa0269810 | Msa0351030 | 0.828128 | 1.067822e-54 | -8.615850e-47 |
| Msa0269810 | Msa0351080 | 0.801668 | 8.078182e-49 | -8.615850e-47 |
| Msa0269810 | Msa0357830 | 0.802446 | 5.588817e-49 | -8.615850e-47 |
| Msa0269810 | Msa0365490 | 0.820874 | 5.444859e-53 | -8.615850e-47 |
| Msa0269810 | Msa0365780 | 0.817260 | 3.616429e-52 | -8.615850e-47 |
| Msa0269810 | Msa0372340 | 0.824180 | 9.280327e-54 | -8.615850e-47 |
| Msa0269810 | Msa0376590 | 0.819162 | 1.342001e-52 | -8.615850e-47 |
| Msa0269810 | Msa0381610 | -0.807725 | 4.391929e-50 | -8.615850e-47 |
| Msa0269810 | Msa0389810 | 0.805209 | 1.490792e-49 | -8.615850e-47 |
| Msa0269810 | Msa0392040 | -0.830177 | 3.400686e-55 | -8.615850e-47 |
| Msa0269810 | Msa0393620 | 0.818012 | 2.446931e-52 | -8.615850e-47 |
| Msa0269810 | Msa0397750 | 0.803711 | 3.060296e-49 | -8.615850e-47 |
| Msa0269810 | Msa0416650 | 0.819754 | 9.834857e-53 | -8.615850e-47 |
| Msa0269810 | Msa0416760 | 0.807340 | 5.301873e-50 | -8.615850e-47 |
| Msa0269810 | Msa0420960 | 0.800589 | 1.342548e-48 | -8.615850e-47 |
| Msa0269810 | Msa0432670 | 0.808905 | 2.461531e-50 | -8.615850e-47 |
| Msa0269810 | Msa0436370 | 0.809121 | 2.213248e-50 | -8.615850e-47 |
| Msa0269810 | Msa0444750 | -0.809371 | 1.955653e-50 | -8.615850e-47 |
| Msa0269810 | Msa0445280 | 0.815441 | 9.231188e-52 | -8.615850e-47 |
| Msa0269810 | Msa0458440 | 0.809630 | 1.720699e-50 | -8.615850e-47 |
| Msa0269810 | Msa0466390 | 0.809036 | 2.307305e-50 | -8.615850e-47 |
| Msa0269810 | Msa0467900 | -0.813058 | 3.101434e-51 | -8.615850e-47 |
| Msa0269810 | Msa0467960 | -0.804424 | 2.174745e-49 | -8.615850e-47 |
| Msa0269810 | Msa0468130 | 0.800595 | 1.338788e-48 | -8.615850e-47 |
| Msa0269810 | Msa0469940 | -0.821968 | 3.045462e-53 | -8.615850e-47 |
| Msa0269810 | Msa0478510 | 0.800078 | 1.706014e-48 | -8.615850e-47 |
| Msa0269810 | Msa0479340 | 0.802842 | 4.630602e-49 | -8.615850e-47 |
| Msa0269810 | Msa0482180 | 0.804610 | 1.988529e-49 | -8.615850e-47 |
| Msa0269810 | Msa0491220 | 0.822462 | 2.338000e-53 | -8.615850e-47 |
| Msa0269810 | Msa0495330 | 0.807207 | 5.658692e-50 | -8.615850e-47 |
| Msa0269810 | Msa0512750 | 0.839205 | 1.821426e-57 | -8.615850e-47 |
| Msa0269810 | Msa0516370 | 0.818869 | 1.564876e-52 | -8.615850e-47 |
| Msa0269810 | Msa0518380 | 0.803622 | 3.193429e-49 | -8.615850e-47 |
| Msa0269810 | Msa0523940 | 0.801219 | 9.981843e-49 | -8.615850e-47 |
| Msa0269810 | Msa0526070 | -0.835495 | 1.622799e-56 | -8.615850e-47 |
| Msa0269810 | Msa0545080 | 0.804344 | 2.259877e-49 | -8.615850e-47 |
| Msa0269810 | Msa0545700 | 0.813311 | 2.728846e-51 | -8.615850e-47 |
| Msa0269810 | Msa0553460 | 0.819654 | 1.037024e-52 | -8.615850e-47 |
| Msa0269810 | Msa0558690 | 0.829016 | 6.517469e-55 | -8.615850e-47 |
| Msa0269810 | Msa0559190 | 0.801343 | 9.414966e-49 | -8.615850e-47 |
| Msa0269810 | Msa0562440 | 0.825979 | 3.488209e-54 | -8.615850e-47 |
| Msa0269810 | Msa0566160 | -0.802535 | 5.358895e-49 | -8.615850e-47 |
| Msa0269810 | Msa0572420 | 0.800319 | 1.524038e-48 | -8.615850e-47 |
| Msa0269810 | Msa0572480 | 0.805144 | 1.537884e-49 | -8.615850e-47 |
| Msa0269810 | Msa0584860 | 0.801360 | 9.341739e-49 | -8.615850e-47 |
| Msa0269810 | Msa0585700 | 0.805645 | 1.207601e-49 | -8.615850e-47 |
| Msa0269810 | Msa0587030 | 0.834115 | 3.612093e-56 | -8.615850e-47 |
| Msa0269810 | Msa0587190 | 0.801793 | 7.612723e-49 | -8.615850e-47 |
| Msa0269810 | Msa0589280 | 0.820362 | 7.138915e-53 | -8.615850e-47 |
| Msa0269810 | Msa0603370 | 0.811512 | 6.746647e-51 | -8.615850e-47 |
| Msa0269810 | Msa0607540 | 0.808058 | 3.731202e-50 | -8.615850e-47 |
| Msa0269810 | Msa0613440 | 0.828794 | 7.374572e-55 | -8.615850e-47 |
| Msa0269810 | Msa0613460 | 0.836970 | 6.846589e-57 | -8.615850e-47 |
| Msa0269810 | Msa0615010 | 0.819883 | 9.190614e-53 | -8.615850e-47 |
| Msa0269810 | Msa0620960 | 0.803818 | 2.906626e-49 | -8.615850e-47 |
| Msa0269810 | Msa0621590 | 0.809498 | 1.837056e-50 | -8.615850e-47 |
| Msa0269810 | Msa0622170 | -0.822539 | 2.244386e-53 | -8.615850e-47 |
| Msa0269810 | Msa0623080 | 0.843262 | 1.561466e-58 | -8.615850e-47 |
| Msa0269810 | Msa0626850 | 0.835135 | 2.001026e-56 | -8.615850e-47 |
| Msa0269810 | Msa0640860 | 0.807696 | 4.455779e-50 | -8.615850e-47 |
| Msa0269810 | Msa0641670 | 0.814681 | 1.361315e-51 | -8.615850e-47 |
| Msa0269810 | Msa0644400 | 0.802660 | 5.049244e-49 | -8.615850e-47 |
| Msa0269810 | Msa0647830 | 0.811933 | 5.464504e-51 | -8.615850e-47 |
| Msa0269810 | Msa0648860 | 0.831672 | 1.461690e-55 | -8.615850e-47 |
| Msa0269810 | Msa0653440 | 0.820572 | 6.390410e-53 | -8.615850e-47 |
| Msa0269810 | Msa0654010 | 0.818801 | 1.621888e-52 | -8.615850e-47 |
| Msa0269810 | Msa0657870 | 0.808879 | 2.493449e-50 | -8.615850e-47 |
| Msa0269810 | Msa0658570 | 0.824969 | 6.049901e-54 | -8.615850e-47 |
| Msa0269810 | Msa0661650 | 0.811405 | 7.118619e-51 | -8.615850e-47 |
| Msa0269810 | Msa0662570 | 0.814146 | 1.787570e-51 | -8.615850e-47 |
| Msa0269810 | Msa0663380 | 0.801337 | 9.444628e-49 | -8.615850e-47 |
| Msa0269810 | Msa0664970 | 0.811941 | 5.440470e-51 | -8.615850e-47 |
| Msa0269810 | Msa0667740 | 0.805283 | 1.438403e-49 | -8.615850e-47 |
| Msa0269810 | Msa0673460 | 0.801655 | 8.126691e-49 | -8.615850e-47 |
| Msa0269810 | Msa0679290 | -0.808734 | 2.676964e-50 | -8.615850e-47 |
| Msa0269810 | Msa0679550 | 0.802306 | 5.972535e-49 | -8.615850e-47 |
| Msa0269810 | Msa0683170 | 0.802085 | 6.632406e-49 | -8.615850e-47 |
| Msa0269810 | Msa0689010 | 0.829260 | 5.685401e-55 | -8.615850e-47 |
| Msa0269810 | Msa0689780 | 0.803839 | 2.878276e-49 | -8.615850e-47 |
| Msa0269810 | Msa0693380 | 0.834158 | 3.523245e-56 | -8.615850e-47 |
| Msa0269810 | Msa0695870 | 0.830935 | 2.218411e-55 | -8.615850e-47 |
| Msa0269810 | Msa0696390 | 0.816426 | 5.563892e-52 | -8.615850e-47 |
| Msa0269810 | Msa0701010 | 0.800088 | 1.698085e-48 | -8.615850e-47 |
| Msa0269810 | Msa0703780 | 0.813320 | 2.716883e-51 | -8.615850e-47 |
| Msa0269810 | Msa0715410 | 0.829579 | 4.756238e-55 | -8.615850e-47 |
| Msa0269810 | Msa0716840 | 0.806009 | 1.012775e-49 | -8.615850e-47 |
| Msa0269810 | Msa0723110 | 0.803796 | 2.938483e-49 | -8.615850e-47 |
| Msa0269810 | Msa0724210 | 0.811075 | 8.391784e-51 | -8.615850e-47 |
| Msa0269810 | Msa0731180 | 0.827558 | 1.463903e-54 | -8.615850e-47 |
| Msa0269810 | Msa0731940 | 0.821915 | 3.131764e-53 | -8.615850e-47 |
| Msa0269810 | Msa0735170 | 0.815143 | 1.075179e-51 | -8.615850e-47 |
| Msa0269810 | Msa0790510 | 0.810325 | 1.219383e-50 | -8.615850e-47 |
| Msa0269810 | Msa0790680 | 0.827549 | 1.471371e-54 | -8.615850e-47 |
| Msa0269810 | Msa0796690 | 0.812263 | 4.630595e-51 | -8.615850e-47 |
| Msa0269810 | Msa0801780 | 0.809935 | 1.479749e-50 | -8.615850e-47 |
| Msa0269810 | Msa0820850 | 0.826853 | 2.159146e-54 | -8.615850e-47 |
| Msa0269810 | Msa0825870 | 0.810629 | 1.047980e-50 | -8.615850e-47 |
| Msa0269810 | Msa0831850 | 0.811255 | 7.671495e-51 | -8.615850e-47 |
| Msa0269810 | Msa0842650 | 0.838810 | 2.304726e-57 | -8.615850e-47 |
| Msa0269810 | Msa0849030 | 0.807874 | 4.083183e-50 | -8.615850e-47 |
| Msa0269810 | Msa0853520 | 0.807107 | 5.941436e-50 | -8.615850e-47 |
| Msa0269810 | Msa0861130 | 0.827814 | 1.270806e-54 | -8.615850e-47 |
| Msa0269810 | Msa0865330 | 0.805333 | 1.404303e-49 | -8.615850e-47 |
| Msa0269810 | Msa0870060 | 0.842477 | 2.524319e-58 | -8.615850e-47 |
| Msa0269810 | Msa0870830 | 0.817773 | 2.771466e-52 | -8.615850e-47 |
| Msa0269810 | Msa0877250 | 0.805306 | 1.422849e-49 | -8.615850e-47 |
| Msa0269810 | Msa0882690 | 0.800288 | 1.546394e-48 | -8.615850e-47 |
| Msa0269810 | Msa0887950 | 0.841007 | 6.168458e-58 | -8.615850e-47 |
| Msa0269810 | Msa0887960 | 0.863441 | 2.483308e-64 | -8.615850e-47 |
| Msa0269810 | Msa0897330 | 0.800683 | 1.284441e-48 | -8.615850e-47 |
| Msa0269810 | Msa0903370 | 0.814416 | 1.558368e-51 | -8.615850e-47 |
| Msa0269810 | Msa0907070 | 0.826238 | 3.027814e-54 | -8.615850e-47 |
| Msa0269810 | Msa0908770 | -0.807598 | 4.674659e-50 | -8.615850e-47 |
| Msa0269810 | Msa0913480 | -0.814699 | 1.348861e-51 | -8.615850e-47 |
| Msa0269810 | Msa0914260 | 0.809463 | 1.869135e-50 | -8.615850e-47 |
| Msa0269810 | Msa0914290 | 0.818829 | 1.598300e-52 | -8.615850e-47 |
| Msa0269810 | Msa0919530 | 0.811146 | 8.100487e-51 | -8.615850e-47 |
| Msa0269810 | Msa0926890 | 0.812044 | 5.166778e-51 | -8.615850e-47 |
| Msa0269810 | Msa0927380 | 0.839189 | 1.838631e-57 | -8.615850e-47 |
| Msa0269810 | Msa0930460 | -0.801945 | 7.086099e-49 | -8.615850e-47 |
| Msa0269810 | Msa0935770 | 0.826005 | 3.438474e-54 | -8.615850e-47 |
| Msa0269810 | Msa0939250 | 0.817324 | 3.498007e-52 | -8.615850e-47 |
| Msa0269810 | Msa0943190 | 0.831966 | 1.236653e-55 | -8.615850e-47 |
| Msa0269810 | Msa0947660 | 0.820225 | 7.674375e-53 | -8.615850e-47 |
| Msa0269810 | Msa0947760 | 0.800071 | 1.711370e-48 | -8.615850e-47 |
| Msa0269810 | Msa0952360 | 0.812838 | 3.465753e-51 | -8.615850e-47 |
| Msa0269810 | Msa0960740 | 0.807059 | 6.082632e-50 | -8.615850e-47 |
| Msa0269810 | Msa0964130 | 0.847986 | 8.169687e-60 | -8.615850e-47 |
| Msa0269810 | Msa0964900 | 0.803766 | 2.979786e-49 | -8.615850e-47 |
| Msa0269810 | Msa0965610 | 0.805864 | 1.086730e-49 | -8.615850e-47 |
| Msa0269810 | Msa0969520 | 0.837724 | 4.390539e-57 | -8.615850e-47 |
| Msa0269810 | Msa0973600 | 0.846130 | 2.634185e-59 | -8.615850e-47 |
| Msa0269810 | Msa0976670 | 0.806818 | 6.839982e-50 | -8.615850e-47 |
| Msa0269810 | Msa0982270 | 0.804504 | 2.092498e-49 | -8.615850e-47 |
| Msa0269810 | Msa0990960 | 0.802410 | 5.686209e-49 | -8.615850e-47 |
| Msa0269810 | Msa0992490 | -0.817316 | 3.513344e-52 | -8.615850e-47 |
| Msa0269810 | Msa0993290 | 0.812168 | 4.856779e-51 | -8.615850e-47 |
| Msa0269810 | Msa0993600 | 0.807725 | 4.393784e-50 | -8.615850e-47 |
| Msa0269810 | Msa0996170 | 0.805497 | 1.297569e-49 | -8.615850e-47 |
| Msa0269810 | Msa1000250 | 0.811465 | 6.908599e-51 | -8.615850e-47 |
| Msa0269810 | Msa1000900 | 0.803364 | 3.611857e-49 | -8.615850e-47 |
| Msa0269810 | Msa1003620 | 0.814800 | 1.281052e-51 | -8.615850e-47 |
| Msa0269810 | Msa1007230 | 0.818310 | 2.095379e-52 | -8.615850e-47 |
| Msa0269810 | Msa1012830 | 0.807425 | 5.087233e-50 | -8.615850e-47 |
| Msa0269810 | Msa1014540 | 0.818538 | 1.860052e-52 | -8.615850e-47 |
| Msa0269810 | Msa1014990 | 0.800542 | 1.372606e-48 | -8.615850e-47 |
| Msa0269810 | Msa1019000 | 0.803234 | 3.842864e-49 | -8.615850e-47 |
| Msa0269810 | Msa1026940 | 0.801616 | 8.277429e-49 | -8.615850e-47 |
| Msa0269810 | Msa1029270 | 0.803729 | 3.033282e-49 | -8.615850e-47 |
| Msa0269810 | Msa1033410 | -0.818395 | 2.004347e-52 | -8.615850e-47 |
| Msa0269810 | Msa1036710 | -0.803067 | 4.159644e-49 | -8.615850e-47 |
| Msa0269810 | Msa1039710 | -0.834175 | 3.488247e-56 | -8.615850e-47 |
| Msa0269810 | Msa1046460 | 0.800904 | 1.158076e-48 | -8.615850e-47 |
| Msa0269810 | Msa1052330 | 0.802927 | 4.447688e-49 | -8.615850e-47 |
| Msa0269810 | Msa1054990 | 0.814538 | 1.463935e-51 | -8.615850e-47 |
| Msa0269810 | Msa1061020 | -0.828574 | 8.337460e-55 | -8.615850e-47 |
| Msa0269810 | Msa1061060 | -0.831538 | 1.577164e-55 | -8.615850e-47 |
| Msa0269810 | Msa1073070 | -0.817454 | 3.269827e-52 | -8.615850e-47 |
| Msa0269810 | Msa1075220 | -0.846771 | 1.761515e-59 | -8.615850e-47 |
| Msa0269810 | Msa1075540 | 0.813879 | 2.046701e-51 | -8.615850e-47 |
| Msa0269810 | Msa1082500 | 0.813685 | 2.259066e-51 | -8.615850e-47 |
| Msa0269810 | Msa1082580 | 0.807784 | 4.268204e-50 | -8.615850e-47 |
| Msa0269810 | Msa1084260 | 0.817908 | 2.582992e-52 | -8.615850e-47 |
| Msa0269810 | Msa1089940 | 0.814962 | 1.179489e-51 | -8.615850e-47 |
| Msa0269810 | Msa1090260 | 0.842493 | 2.499925e-58 | -8.615850e-47 |
| Msa0269810 | Msa1098250 | 0.819858 | 9.311233e-53 | -8.615850e-47 |
| Msa0269810 | Msa1098270 | 0.809654 | 1.700649e-50 | -8.615850e-47 |
| Msa0269810 | Msa1100050 | 0.808856 | 2.521464e-50 | -8.615850e-47 |
| Msa0269810 | Msa1100930 | 0.827086 | 1.899634e-54 | -8.615850e-47 |
| Msa0269810 | Msa1111870 | 0.810108 | 1.358021e-50 | -8.615850e-47 |
| Msa0269810 | Msa1113170 | 0.807411 | 5.122139e-50 | -8.615850e-47 |
| Msa0269810 | Msa1115280 | 0.808351 | 3.233032e-50 | -8.615850e-47 |
| Msa0269810 | Msa1116130 | -0.835823 | 1.340778e-56 | -8.615850e-47 |
| Msa0269810 | Msa1118610 | 0.813180 | 2.916722e-51 | -8.615850e-47 |
| Msa0269810 | Msa1121490 | 0.815165 | 1.063215e-51 | -8.615850e-47 |
| Msa0269810 | Msa1137570 | 0.806559 | 7.756320e-50 | -8.615850e-47 |
| Msa0269810 | Msa1139000 | -0.840784 | 7.057870e-58 | -8.615850e-47 |
| Msa0269810 | Msa1143930 | -0.810346 | 1.206857e-50 | -8.615850e-47 |
| Msa0269810 | Msa1144720 | -0.818181 | 2.241057e-52 | -8.615850e-47 |
| Msa0269810 | Msa1147740 | 0.806928 | 6.481466e-50 | -8.615850e-47 |
| Msa0269810 | Msa1156020 | 0.803608 | 3.214391e-49 | -8.615850e-47 |
| Msa0269810 | Msa1162550 | -0.854773 | 9.845310e-62 | -8.615850e-47 |
| Msa0269810 | Msa1174040 | 0.802475 | 5.511614e-49 | -8.615850e-47 |
| Msa0269810 | Msa1177330 | 0.802549 | 5.321206e-49 | -8.615850e-47 |
| Msa0269810 | Msa1177780 | 0.847613 | 1.035454e-59 | -8.615850e-47 |
| Msa0269810 | Msa1181550 | 0.804873 | 1.752327e-49 | -8.615850e-47 |
| Msa0269810 | Msa1186950 | -0.862071 | 6.567781e-64 | -8.615850e-47 |
| Msa0269810 | Msa1198770 | 0.819127 | 1.367222e-52 | -8.615850e-47 |
| Msa0269810 | Msa1201200 | 0.806532 | 7.857311e-50 | -8.615850e-47 |
| Msa0269810 | Msa1201430 | -0.805163 | 1.524406e-49 | -8.615850e-47 |
| Msa0269810 | Msa1203250 | 0.815220 | 1.033737e-51 | -8.615850e-47 |
| Msa0269810 | Msa1210020 | 0.812820 | 3.497244e-51 | -8.615850e-47 |
| Msa0269810 | Msa1210110 | 0.836496 | 9.046354e-57 | -8.615850e-47 |
| Msa0269810 | Msa1217430 | -0.807680 | 4.491824e-50 | -8.615850e-47 |
| Msa0269810 | Msa1224810 | 0.804055 | 2.595671e-49 | -8.615850e-47 |
| Msa0269810 | Msa1225100 | 0.840378 | 9.013082e-58 | -8.615850e-47 |
| Msa0269810 | Msa1229600 | 0.826936 | 2.063738e-54 | -8.615850e-47 |
| Msa0269810 | Msa1233890 | 0.808343 | 3.245499e-50 | -8.615850e-47 |
| Msa0269810 | Msa1236730 | 0.836529 | 8.872832e-57 | -8.615850e-47 |
| Msa0269810 | Msa1239530 | 0.818162 | 2.263967e-52 | -8.615850e-47 |
| Msa0269810 | Msa1246700 | 0.814795 | 1.284251e-51 | -8.615850e-47 |
| Msa0269810 | Msa1249490 | 0.827799 | 1.281092e-54 | -8.615850e-47 |
| Msa0269810 | Msa1255060 | 0.845916 | 3.013167e-59 | -8.615850e-47 |
| Msa0269810 | Msa1259590 | -0.800156 | 1.644599e-48 | -8.615850e-47 |
| Msa0269810 | Msa1262020 | 0.818304 | 2.102040e-52 | -8.615850e-47 |
| Msa0269810 | Msa1271210 | 0.816825 | 4.527935e-52 | -8.615850e-47 |
| Msa0269810 | Msa1276440 | 0.808837 | 2.545231e-50 | -8.615850e-47 |
| Msa0269810 | Msa1277660 | 0.803301 | 3.721074e-49 | -8.615850e-47 |
| Msa0269810 | Msa1282580 | -0.838648 | 2.537746e-57 | -8.615850e-47 |
| Msa0269810 | Msa1284680 | 0.826004 | 3.440319e-54 | -8.615850e-47 |
| Msa0269810 | Msa1294610 | -0.814011 | 1.914175e-51 | -8.615850e-47 |
| Msa0269810 | Msa1295510 | 0.837682 | 4.499966e-57 | -8.615850e-47 |
| Msa0269810 | Msa1298510 | 0.818020 | 2.437656e-52 | -8.615850e-47 |
| Msa0269810 | Msa1299180 | -0.809374 | 1.953221e-50 | -8.615850e-47 |
| Msa0269810 | Msa1299560 | 0.814374 | 1.591860e-51 | -8.615850e-47 |
| Msa0269810 | Msa1299620 | 0.819720 | 1.001263e-52 | -8.615850e-47 |
| Msa0269810 | Msa1304890 | -0.831462 | 1.646609e-55 | -8.615850e-47 |
| Msa0269810 | Msa1310210 | 0.836833 | 7.423763e-57 | -8.615850e-47 |
| Msa0269810 | Msa1311340 | 0.817112 | 3.903677e-52 | -8.615850e-47 |
| Msa0269810 | Msa1314170 | 0.801740 | 7.808874e-49 | -8.615850e-47 |
| Msa0269810 | Msa1329870 | 0.843268 | 1.555526e-58 | -8.615850e-47 |
| Msa0269810 | Msa1332040 | -0.800620 | 1.323295e-48 | -8.615850e-47 |
| Msa0269810 | Msa1332050 | 0.801091 | 1.060247e-48 | -8.615850e-47 |
| Msa0269810 | Msa1344890 | 0.811982 | 5.331362e-51 | -8.615850e-47 |
| Msa0269810 | Msa1351620 | 0.807357 | 5.258406e-50 | -8.615850e-47 |
| Msa0269810 | Msa1355890 | 0.806063 | 9.865955e-50 | -8.615850e-47 |
| Msa0269810 | Msa1362880 | 0.835784 | 1.371269e-56 | -8.615850e-47 |
| Msa0269810 | Msa1369530 | 0.813514 | 2.463308e-51 | -8.615850e-47 |
| Msa0269810 | Msa1376160 | -0.800177 | 1.628668e-48 | -8.615850e-47 |
| Msa0269810 | Msa1376890 | 0.818723 | 1.689285e-52 | -8.615850e-47 |
| Msa0269810 | Msa1376930 | 0.856775 | 2.560752e-62 | -8.615850e-47 |
| Msa0269810 | Msa1378040 | 0.815223 | 1.031936e-51 | -8.615850e-47 |
| Msa0269810 | Msa1378940 | 0.801962 | 7.029193e-49 | -8.615850e-47 |
| Msa0269810 | Msa1379850 | 0.810127 | 1.345189e-50 | -8.615850e-47 |
| Msa0269810 | Msa1389260 | 0.808015 | 3.811042e-50 | -8.615850e-47 |
| Msa0269810 | Msa1390120 | 0.817968 | 2.503788e-52 | -8.615850e-47 |
| Msa0269810 | Msa1393410 | 0.829255 | 5.703436e-55 | -8.615850e-47 |
| Msa0269810 | Msa1395530 | 0.817309 | 3.525305e-52 | -8.615850e-47 |
| Msa0269810 | Msa1398890 | 0.816823 | 4.532522e-52 | -8.615850e-47 |
| Msa0269810 | Msa1405220 | 0.843100 | 1.724231e-58 | -8.615850e-47 |
| Msa0269810 | Msa1408340 | 0.812073 | 5.093611e-51 | -8.615850e-47 |
| Msa0269810 | Msa1414520 | 0.822643 | 2.122618e-53 | -8.615850e-47 |
| Msa0269810 | Msa1419960 | 0.817232 | 3.669341e-52 | -8.615850e-47 |
| Msa0269810 | Msa1420270 | 0.811519 | 6.724164e-51 | -8.615850e-47 |
| Msa0269810 | Msa1424630 | 0.816035 | 6.803787e-52 | -8.615850e-47 |
| Msa0269810 | Msa1424750 | 0.818460 | 1.938221e-52 | -8.615850e-47 |
| Msa0269810 | Msa1435160 | 0.811509 | 6.757285e-51 | -8.615850e-47 |
| Msa0269810 | Msa1435420 | 0.828461 | 8.874516e-55 | -8.615850e-47 |
| Msa0269810 | Msa1445610 | -0.804614 | 1.985523e-49 | -8.615850e-47 |
| Msa0269810 | Msa1450760 | 0.807485 | 4.940034e-50 | -8.615850e-47 |
| Msa0269810 | Msa1451620 | -0.833650 | 4.721001e-56 | -8.615850e-47 |
| Msa0269810 | Msa1453320 | 0.821952 | 3.071143e-53 | -8.615850e-47 |
| Msa0269810 | Msa1454570 | 0.809326 | 1.999950e-50 | -8.615850e-47 |
| Msa0269810 | Msa1455490 | 0.819763 | 9.791922e-53 | -8.615850e-47 |
| Msa0269810 | Msa1457160 | 0.817803 | 2.728966e-52 | -8.615850e-47 |
| Msa0269810 | Msa1458340 | 0.808622 | 2.829598e-50 | -8.615850e-47 |
| Msa0269810 | Msa1460800 | 0.807771 | 4.295606e-50 | -8.615850e-47 |
| Msa0269810 | Msa1466540 | 0.808171 | 3.530618e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269810 | MtrunA17_Chr2g0319481 | 93.182 | 220 | 11 | 1 | 1 | 220 | 1 | 216 | 9.71e-149 | 412 |
| Msa0269810 | MtrunA17_Chr4g0041881 | 46.698 | 212 | 102 | 5 | 8 | 210 | 11 | 220 | 2.12e-58 | 184 |
| Msa0269810 | MtrunA17_Chr1g0206161 | 23.699 | 173 | 116 | 4 | 10 | 175 | 52 | 215 | 6.11e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269810 | AT3G20600.1 | 41.905 | 210 | 114 | 5 | 8 | 213 | 13 | 218 | 5.00e-47 | 155 |
| Msa0269810 | AT3G20590.1 | 42.857 | 182 | 96 | 4 | 9 | 185 | 14 | 192 | 1.61e-34 | 124 |
| Msa0269810 | AT3G20610.1 | 35.323 | 201 | 116 | 7 | 22 | 215 | 26 | 219 | 3.21e-29 | 109 |
| Msa0269810 | AT4G05220.1 | 22.159 | 176 | 122 | 4 | 13 | 180 | 47 | 215 | 2.46e-11 | 61.6 |
Find 61 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATACCTTTATCTTTATT+AGG | 0.156001 | 2_3:-843220 | None:intergenic |
| TGCGGTTAAGTATAAGATTT+TGG | 0.193625 | 2_3:+843450 | Msa0269810:CDS |
| TGGAGATTCTGGGGAGAAAA+TGG | 0.196345 | 2_3:+843522 | Msa0269810:CDS |
| CTTGGTAATGCTACTGTAAA+TGG | 0.197197 | 2_3:+843301 | Msa0269810:CDS |
| CATCATAACCATAGGCTTAA+TGG | 0.228595 | 2_3:+843057 | Msa0269810:CDS |
| TGATCTTGCTGTTGTGTTTA+GGG | 0.236469 | 2_3:-843161 | None:intergenic |
| AATGTGGAAATTGGAGATTC+TGG | 0.246829 | 2_3:+843511 | Msa0269810:CDS |
| GAATACCTTTATCTTTATTA+GGG | 0.259706 | 2_3:-843219 | None:intergenic |
| TTGATCTTGCTGTTGTGTTT+AGG | 0.268959 | 2_3:-843162 | None:intergenic |
| ATCGTGCGCTTCTTGTGTTT+TGG | 0.270001 | 2_3:+843620 | Msa0269810:CDS |
| TTGATGGTAAAGTTTATCTA+AGG | 0.284290 | 2_3:+843413 | Msa0269810:CDS |
| GGAGGGGCAAATGTGGAAAT+TGG | 0.299189 | 2_3:+843502 | Msa0269810:CDS |
| AAGGTGAAGTTAAGATGAAT+AGG | 0.325470 | 2_3:-843250 | None:intergenic |
| GTCTTGTTTATCATTGGTCT+TGG | 0.334988 | 2_3:+843643 | Msa0269810:CDS |
| AGCTGTTGTTCATGCTGTTC+AGG | 0.351132 | 2_3:+843031 | Msa0269810:CDS |
| AATTTAACTGCGAGTGTTAA+GGG | 0.363654 | 2_3:+843385 | Msa0269810:CDS |
| GTATGCTTAGCCATATGAAT+AGG | 0.380130 | 2_3:-843081 | None:intergenic |
| GTTAACCCTAATAAAGATAA+AGG | 0.389560 | 2_3:+843214 | Msa0269810:CDS |
| GAATTTAACTGCGAGTGTTA+AGG | 0.395995 | 2_3:+843384 | Msa0269810:CDS |
| AGTGTTGAGAGTATTGTAAA+AGG | 0.426836 | 2_3:-843269 | None:intergenic |
| ACTGTAAATGGATTCTATCA+AGG | 0.430123 | 2_3:+843313 | Msa0269810:CDS |
| GGAGATTCTGGGGAGAAAAT+GGG | 0.447531 | 2_3:+843523 | Msa0269810:CDS |
| AAAGAGATCGGGTATGGGGA+GGG | 0.451284 | 2_3:+843485 | Msa0269810:CDS |
| AGTGTTAAGGGTGTTGTTGA+TGG | 0.454047 | 2_3:+843397 | Msa0269810:CDS |
| GCTTAATGGCCCTATTCATA+TGG | 0.461217 | 2_3:+843071 | Msa0269810:CDS |
| ATGTGGAAATTGGAGATTCT+GGG | 0.462099 | 2_3:+843512 | Msa0269810:CDS |
| AGGTGAAGTTAAGATGAATA+GGG | 0.473108 | 2_3:-843249 | None:intergenic |
| GGTATGGGGAGGGGCAAATG+TGG | 0.473413 | 2_3:+843495 | Msa0269810:CDS |
| TATGCTTAGCCATATGAATA+GGG | 0.474917 | 2_3:-843080 | None:intergenic |
| AAGAAAAGTGTGAGGCTTGG+AGG | 0.475890 | 2_3:+843547 | Msa0269810:CDS |
| CAGCATGAACAACAGCTGTT+GGG | 0.497130 | 2_3:-843025 | None:intergenic |
| GAATAGGGCCATTAAGCCTA+TGG | 0.501191 | 2_3:-843065 | None:intergenic |
| ATACGAAAAGAGATCGGGTA+TGG | 0.508627 | 2_3:+843479 | Msa0269810:CDS |
| TCCACACACTTTCCATGCGC+CGG | 0.510157 | 2_3:-843593 | None:intergenic |
| AAGAATGGAGTGGTGGAAGC+TGG | 0.512376 | 2_3:+843355 | Msa0269810:CDS |
| GAACCAAGGGTGATAGTGTC+CGG | 0.513905 | 2_3:+843574 | Msa0269810:CDS |
| AAGAGATCGGGTATGGGGAG+GGG | 0.523912 | 2_3:+843486 | Msa0269810:CDS |
| AGAAAAGTGTGAGGCTTGGA+GGG | 0.526565 | 2_3:+843548 | Msa0269810:CDS |
| TCAGGTTTCATCATAACCAT+AGG | 0.529456 | 2_3:+843049 | Msa0269810:CDS |
| CTCAACACTACTCTTCCACT+TGG | 0.532729 | 2_3:+843283 | Msa0269810:CDS |
| GGGTGATAGTGTCCGGCGCA+TGG | 0.534538 | 2_3:+843581 | Msa0269810:CDS |
| TACGAAAAGAGATCGGGTAT+GGG | 0.536489 | 2_3:+843480 | Msa0269810:CDS |
| ACAGCATGAACAACAGCTGT+TGG | 0.541536 | 2_3:-843026 | None:intergenic |
| GGAAAGAAAAGTGTGAGGCT+TGG | 0.543228 | 2_3:+843544 | Msa0269810:CDS |
| TTGGTATACGAAAAGAGATC+GGG | 0.544628 | 2_3:+843474 | Msa0269810:CDS |
| AGCTAAGAAGAATGGAGTGG+TGG | 0.547361 | 2_3:+843348 | Msa0269810:CDS |
| AAAAGAGATCGGGTATGGGG+AGG | 0.556071 | 2_3:+843484 | Msa0269810:CDS |
| GCGCCGGACACTATCACCCT+TGG | 0.558967 | 2_3:-843577 | None:intergenic |
| CTGTAAATGGATTCTATCAA+GGG | 0.559809 | 2_3:+843314 | Msa0269810:CDS |
| TTTGGTATACGAAAAGAGAT+CGG | 0.560749 | 2_3:+843473 | Msa0269810:CDS |
| TGGTAAAGTTTATCTAAGGG+TGG | 0.560905 | 2_3:+843417 | Msa0269810:CDS |
| TGATGGTAAAGTTTATCTAA+GGG | 0.567329 | 2_3:+843414 | Msa0269810:CDS |
| ACGAAAAGAGATCGGGTATG+GGG | 0.597221 | 2_3:+843481 | Msa0269810:CDS |
| GGCTTGGAGGGAATGAACCA+AGG | 0.634018 | 2_3:+843560 | Msa0269810:CDS |
| GCTTGGAGGGAATGAACCAA+GGG | 0.643282 | 2_3:+843561 | Msa0269810:CDS |
| TGTGGAAATTGGAGATTCTG+GGG | 0.648415 | 2_3:+843513 | Msa0269810:CDS |
| GGCGCATGGAAAGTGTGTGG+AGG | 0.656040 | 2_3:+843595 | Msa0269810:CDS |
| AAAAGCTAAGAAGAATGGAG+TGG | 0.661701 | 2_3:+843345 | Msa0269810:CDS |
| TCCGGCGCATGGAAAGTGTG+TGG | 0.671773 | 2_3:+843592 | Msa0269810:CDS |
| TTTACAGTAGCATTACCAAG+TGG | 0.674013 | 2_3:-843298 | None:intergenic |
| AAATGGGAAAGAAAAGTGTG+AGG | 0.693699 | 2_3:+843539 | Msa0269810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATACCTTTATCTTTATTA+GGG | - | chr2_3:843222-843241 | None:intergenic | 20.0% |
| !! | TGAATACCTTTATCTTTATT+AGG | - | chr2_3:843223-843242 | None:intergenic | 20.0% |
| !!! | TTAAGTATAAGATTTTGGTT+TGG | + | chr2_3:843455-843474 | Msa0269810:CDS | 20.0% |
| !! | ATTTTGTCTATGTAAAGCTT+TGG | - | chr2_3:843118-843137 | None:intergenic | 25.0% |
| ! | GTTAACCCTAATAAAGATAA+AGG | + | chr2_3:843214-843233 | Msa0269810:CDS | 25.0% |
| !! | TTGATGGTAAAGTTTATCTA+AGG | + | chr2_3:843413-843432 | Msa0269810:CDS | 25.0% |
| ! | TGATGGTAAAGTTTATCTAA+GGG | + | chr2_3:843414-843433 | Msa0269810:CDS | 25.0% |
| TATGCTTAGCCATATGAATA+GGG | - | chr2_3:843083-843102 | None:intergenic | 30.0% | |
| !! | GTTAACAAGTTTTAACGTGA+AGG | - | chr2_3:843200-843219 | None:intergenic | 30.0% |
| AGGTGAAGTTAAGATGAATA+GGG | - | chr2_3:843252-843271 | None:intergenic | 30.0% | |
| AAGGTGAAGTTAAGATGAAT+AGG | - | chr2_3:843253-843272 | None:intergenic | 30.0% | |
| !! | AGTGTTGAGAGTATTGTAAA+AGG | - | chr2_3:843272-843291 | None:intergenic | 30.0% |
| ! | ACTGTAAATGGATTCTATCA+AGG | + | chr2_3:843313-843332 | Msa0269810:CDS | 30.0% |
| ! | CTGTAAATGGATTCTATCAA+GGG | + | chr2_3:843314-843333 | Msa0269810:CDS | 30.0% |
| GAGAAAAAAGCTAAGAAGAA+TGG | + | chr2_3:843340-843359 | Msa0269810:CDS | 30.0% | |
| AATTTAACTGCGAGTGTTAA+GGG | + | chr2_3:843385-843404 | Msa0269810:CDS | 30.0% | |
| ! | TGCGGTTAAGTATAAGATTT+TGG | + | chr2_3:843450-843469 | Msa0269810:CDS | 30.0% |
| TTTGGTATACGAAAAGAGAT+CGG | + | chr2_3:843473-843492 | Msa0269810:CDS | 30.0% | |
| !!! | TTTTGGGTCTTGTTTATCAT+TGG | + | chr2_3:843637-843656 | Msa0269810:CDS | 30.0% |
| TCAGGTTTCATCATAACCAT+AGG | + | chr2_3:843049-843068 | Msa0269810:CDS | 35.0% | |
| CATCATAACCATAGGCTTAA+TGG | + | chr2_3:843057-843076 | Msa0269810:CDS | 35.0% | |
| GTATGCTTAGCCATATGAAT+AGG | - | chr2_3:843084-843103 | None:intergenic | 35.0% | |
| !!! | TGTGTTTAGGGTTTTGTTGA+GGG | - | chr2_3:843152-843171 | None:intergenic | 35.0% |
| !!! | TTGTGTTTAGGGTTTTGTTG+AGG | - | chr2_3:843153-843172 | None:intergenic | 35.0% |
| !! | TGATCTTGCTGTTGTGTTTA+GGG | - | chr2_3:843164-843183 | None:intergenic | 35.0% |
| !! | TTGATCTTGCTGTTGTGTTT+AGG | - | chr2_3:843165-843184 | None:intergenic | 35.0% |
| ! | TTTTAACGTGAAGGTGATAG+TGG | - | chr2_3:843191-843210 | None:intergenic | 35.0% |
| TTTACAGTAGCATTACCAAG+TGG | - | chr2_3:843301-843320 | None:intergenic | 35.0% | |
| !! | CTTGGTAATGCTACTGTAAA+TGG | + | chr2_3:843301-843320 | Msa0269810:CDS | 35.0% |
| AAAAGCTAAGAAGAATGGAG+TGG | + | chr2_3:843345-843364 | Msa0269810:CDS | 35.0% | |
| GAATTTAACTGCGAGTGTTA+AGG | + | chr2_3:843384-843403 | Msa0269810:CDS | 35.0% | |
| TGGTAAAGTTTATCTAAGGG+TGG | + | chr2_3:843417-843436 | Msa0269810:CDS | 35.0% | |
| !!! | AAGGGTGGATTATTTTACTG+CGG | + | chr2_3:843432-843451 | Msa0269810:CDS | 35.0% |
| TTGGTATACGAAAAGAGATC+GGG | + | chr2_3:843474-843493 | Msa0269810:CDS | 35.0% | |
| AATGTGGAAATTGGAGATTC+TGG | + | chr2_3:843511-843530 | Msa0269810:CDS | 35.0% | |
| ATGTGGAAATTGGAGATTCT+GGG | + | chr2_3:843512-843531 | Msa0269810:CDS | 35.0% | |
| ! | AAATGGGAAAGAAAAGTGTG+AGG | + | chr2_3:843539-843558 | Msa0269810:CDS | 35.0% |
| !! | GTCTTGTTTATCATTGGTCT+TGG | + | chr2_3:843643-843662 | Msa0269810:CDS | 35.0% |
| GCTTAATGGCCCTATTCATA+TGG | + | chr2_3:843071-843090 | Msa0269810:CDS | 40.0% | |
| !! | AGTGTTAAGGGTGTTGTTGA+TGG | + | chr2_3:843397-843416 | Msa0269810:CDS | 40.0% |
| ATACGAAAAGAGATCGGGTA+TGG | + | chr2_3:843479-843498 | Msa0269810:CDS | 40.0% | |
| TACGAAAAGAGATCGGGTAT+GGG | + | chr2_3:843480-843499 | Msa0269810:CDS | 40.0% | |
| TGTGGAAATTGGAGATTCTG+GGG | + | chr2_3:843513-843532 | Msa0269810:CDS | 40.0% | |
| CAGCATGAACAACAGCTGTT+GGG | - | chr2_3:843028-843047 | None:intergenic | 45.0% | |
| ACAGCATGAACAACAGCTGT+TGG | - | chr2_3:843029-843048 | None:intergenic | 45.0% | |
| AGCTGTTGTTCATGCTGTTC+AGG | + | chr2_3:843031-843050 | Msa0269810:CDS | 45.0% | |
| GAATAGGGCCATTAAGCCTA+TGG | - | chr2_3:843068-843087 | None:intergenic | 45.0% | |
| !!! | TTTAGGGTTTTGTTGAGGGC+AGG | - | chr2_3:843148-843167 | None:intergenic | 45.0% |
| CTCAACACTACTCTTCCACT+TGG | + | chr2_3:843283-843302 | Msa0269810:CDS | 45.0% | |
| AGCTAAGAAGAATGGAGTGG+TGG | + | chr2_3:843348-843367 | Msa0269810:CDS | 45.0% | |
| ACGAAAAGAGATCGGGTATG+GGG | + | chr2_3:843481-843500 | Msa0269810:CDS | 45.0% | |
| ! | TGGAGATTCTGGGGAGAAAA+TGG | + | chr2_3:843522-843541 | Msa0269810:CDS | 45.0% |
| ! | GGAGATTCTGGGGAGAAAAT+GGG | + | chr2_3:843523-843542 | Msa0269810:CDS | 45.0% |
| ! | GGAAAGAAAAGTGTGAGGCT+TGG | + | chr2_3:843544-843563 | Msa0269810:CDS | 45.0% |
| ! | AAGAAAAGTGTGAGGCTTGG+AGG | + | chr2_3:843547-843566 | Msa0269810:CDS | 45.0% |
| ! | AGAAAAGTGTGAGGCTTGGA+GGG | + | chr2_3:843548-843567 | Msa0269810:CDS | 45.0% |
| ! | ATCGTGCGCTTCTTGTGTTT+TGG | + | chr2_3:843620-843639 | Msa0269810:CDS | 45.0% |
| ! | TCGTGCGCTTCTTGTGTTTT+GGG | + | chr2_3:843621-843640 | Msa0269810:CDS | 45.0% |
| ! | AAGAATGGAGTGGTGGAAGC+TGG | + | chr2_3:843355-843374 | Msa0269810:CDS | 50.0% |
| AAAAGAGATCGGGTATGGGG+AGG | + | chr2_3:843484-843503 | Msa0269810:CDS | 50.0% | |
| AAAGAGATCGGGTATGGGGA+GGG | + | chr2_3:843485-843504 | Msa0269810:CDS | 50.0% | |
| GGAGGGGCAAATGTGGAAAT+TGG | + | chr2_3:843502-843521 | Msa0269810:CDS | 50.0% | |
| GCTTGGAGGGAATGAACCAA+GGG | + | chr2_3:843561-843580 | Msa0269810:CDS | 50.0% | |
| ! | GAACCAAGGGTGATAGTGTC+CGG | + | chr2_3:843574-843593 | Msa0269810:CDS | 50.0% |
| !!! | GGGTTTTGTTGAGGGCAGGA+AGG | - | chr2_3:843144-843163 | None:intergenic | 55.0% |
| AAGAGATCGGGTATGGGGAG+GGG | + | chr2_3:843486-843505 | Msa0269810:CDS | 55.0% | |
| GGCTTGGAGGGAATGAACCA+AGG | + | chr2_3:843560-843579 | Msa0269810:CDS | 55.0% | |
| TCCACACACTTTCCATGCGC+CGG | - | chr2_3:843596-843615 | None:intergenic | 55.0% | |
| GGTATGGGGAGGGGCAAATG+TGG | + | chr2_3:843495-843514 | Msa0269810:CDS | 60.0% | |
| ! | TCCGGCGCATGGAAAGTGTG+TGG | + | chr2_3:843592-843611 | Msa0269810:CDS | 60.0% |
| ! | GGCGCATGGAAAGTGTGTGG+AGG | + | chr2_3:843595-843614 | Msa0269810:CDS | 60.0% |
| GCGCCGGACACTATCACCCT+TGG | - | chr2_3:843580-843599 | None:intergenic | 65.0% | |
| ! | GGGTGATAGTGTCCGGCGCA+TGG | + | chr2_3:843581-843600 | Msa0269810:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 843010 | 843684 | 843010 | ID=Msa0269810;Name=Msa0269810 |
| chr2_3 | mRNA | 843010 | 843684 | 843010 | ID=Msa0269810-mRNA-1;Parent=Msa0269810;Name=Msa0269810-mRNA-1;_AED=0.01;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|224 |
| chr2_3 | exon | 843010 | 843684 | 843010 | ID=Msa0269810-mRNA-1:exon:397;Parent=Msa0269810-mRNA-1 |
| chr2_3 | CDS | 843010 | 843684 | 843010 | ID=Msa0269810-mRNA-1:cds;Parent=Msa0269810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
