Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030110 | RYQ85991.1 | 61.688 | 154 | 20 | 1 | 27 | 141 | 79 | 232 | 3.01e-55 | 183 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030110 | sp|Q9LF14|CRS2B_ARATH | 45.833 | 168 | 35 | 3 | 30 | 141 | 73 | 240 | 2.40e-39 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030110 | A0A444X8J8 | 61.688 | 154 | 20 | 1 | 27 | 141 | 79 | 232 | 1.44e-55 | 183 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015220 | Msa1030110 | 0.804439 | 2.158756e-49 | -8.615850e-47 |
| Msa0653690 | Msa1030110 | 0.800012 | 1.759729e-48 | -8.615850e-47 |
| Msa0706300 | Msa1030110 | 0.809444 | 1.886619e-50 | -8.615850e-47 |
| Msa0213020 | Msa1030110 | 0.812004 | 5.272331e-51 | -8.615850e-47 |
| Msa0379090 | Msa1030110 | 0.815172 | 1.059233e-51 | -8.615850e-47 |
| Msa1030110 | Msa1128850 | 0.801631 | 8.218746e-49 | -8.615850e-47 |
| Msa1030110 | Msa1209240 | 0.832941 | 7.091425e-56 | -8.615850e-47 |
| Msa1030110 | Msa1420600 | 0.803977 | 2.694696e-49 | -8.615850e-47 |
| Msa1030110 | Msa1425540 | 0.807542 | 4.804583e-50 | -8.615850e-47 |
| Msa1030110 | Msa1465950 | 0.807651 | 4.555848e-50 | -8.615850e-47 |
| Msa0537960 | Msa1030110 | 0.824566 | 7.530123e-54 | -8.615850e-47 |
| Msa0581240 | Msa1030110 | 0.836730 | 7.884331e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030110 | MtrunA17_Chr7g0250851 | 61.988 | 171 | 9 | 2 | 27 | 141 | 81 | 251 | 4.45e-60 | 186 |
| Msa1030110 | MtrunA17_Chr8g0385391 | 61.404 | 171 | 10 | 2 | 27 | 141 | 73 | 243 | 2.12e-59 | 183 |
| Msa1030110 | MtrunA17_Chr8g0378771 | 50.602 | 83 | 41 | 0 | 59 | 141 | 130 | 212 | 4.14e-22 | 87.4 |
| Msa1030110 | MtrunA17_Chr8g0390771 | 44.156 | 77 | 43 | 0 | 59 | 135 | 177 | 253 | 4.38e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030110 | AT5G16140.2 | 45.833 | 168 | 35 | 3 | 30 | 141 | 73 | 240 | 2.44e-40 | 135 |
| Msa1030110 | AT5G16140.1 | 45.833 | 168 | 35 | 3 | 30 | 141 | 73 | 240 | 2.44e-40 | 135 |
| Msa1030110 | AT5G38290.2 | 68.675 | 83 | 26 | 0 | 59 | 141 | 168 | 250 | 3.92e-37 | 127 |
| Msa1030110 | AT5G38290.1 | 68.675 | 83 | 26 | 0 | 59 | 141 | 164 | 246 | 4.70e-37 | 127 |
| Msa1030110 | AT5G19830.1 | 48.780 | 82 | 42 | 0 | 59 | 140 | 131 | 212 | 8.03e-21 | 84.7 |
| Msa1030110 | AT1G18440.1 | 45.205 | 73 | 40 | 0 | 59 | 131 | 207 | 279 | 1.13e-17 | 77.4 |
Find 46 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTAGTGGTGTACATTT+AGG | 0.217726 | 7_1:+63994095 | None:intergenic |
| CGGAAACCCTCCTGGAACTA+TGG | 0.238093 | 7_1:-63994637 | Msa1030110:CDS |
| ATAATGAAAGTTCCTTCTTC+TGG | 0.257421 | 7_1:+63996603 | None:intergenic |
| GCAAGGCAACCTTTGCTCTT+TGG | 0.269788 | 7_1:-63993925 | Msa1030110:three_prime_UTR |
| TTGATATGTACAGGTTCTAT+TGG | 0.279222 | 7_1:-63996083 | Msa1030110:intron |
| CATGTCAATAGATTCAATTT+AGG | 0.292948 | 7_1:-63994151 | Msa1030110:CDS |
| ATGTCAATAGATTCAATTTA+GGG | 0.304320 | 7_1:-63994150 | Msa1030110:CDS |
| ACATGGCTAATCTACGAAAT+TGG | 0.307435 | 7_1:-63993959 | Msa1030110:three_prime_UTR |
| ATAGAATTTCTCATAGATAA+AGG | 0.348536 | 7_1:+63993892 | None:intergenic |
| TGAGGTTTCGCCAACAAAAC+TGG | 0.384292 | 7_1:+63996053 | None:intergenic |
| TTAGGACTTTAGTGCTCAAT+GGG | 0.394097 | 7_1:-63994183 | Msa1030110:CDS |
| GCTCTTAAATCCATAGTTCC+AGG | 0.394847 | 7_1:+63994627 | None:intergenic |
| AAATAATTGACAGTCTTTCT+CGG | 0.408351 | 7_1:-63996247 | Msa1030110:intron |
| ATGGCAGGTTGATGAGTCAT+TGG | 0.410508 | 7_1:-63994224 | Msa1030110:intron |
| GTTAGGACTTTAGTGCTCAA+TGG | 0.425108 | 7_1:-63994184 | Msa1030110:CDS |
| TAATGAAAGTTCCTTCTTCT+GGG | 0.432772 | 7_1:+63996604 | None:intergenic |
| ATACAGTCAAAAGCCTTGAT+TGG | 0.447917 | 7_1:-63996200 | Msa1030110:CDS |
| AAAGTTCCTTCTTCTGGGAT+AGG | 0.460451 | 7_1:+63996609 | None:intergenic |
| AATTGAATCTATTGACATGA+TGG | 0.460838 | 7_1:+63994155 | None:intergenic |
| AGCAAGGAGTTCAAGCTGTT+AGG | 0.464491 | 7_1:-63994201 | Msa1030110:CDS |
| TCAAAAGCCTTGATTGGAAT+AGG | 0.471258 | 7_1:-63996194 | Msa1030110:intron |
| GTTAAAGATAAGGTTGGACT+TGG | 0.472315 | 7_1:+63996631 | None:intergenic |
| GTAGGAATCGGAAACCCTCC+TGG | 0.472720 | 7_1:-63994645 | Msa1030110:intron |
| AAAGGTTGCCTTGCAACATA+TGG | 0.477301 | 7_1:+63993934 | None:intergenic |
| CTTTAACCTATCCCAGAAGA+AGG | 0.477782 | 7_1:-63996615 | Msa1030110:CDS |
| TCTGGGATAGGTTAAAGATA+AGG | 0.494074 | 7_1:+63996621 | None:intergenic |
| TCTTCTACAAAAGTTCAGTT+CGG | 0.503124 | 7_1:-63994601 | Msa1030110:CDS |
| CGATGCACCTATTCCAATCA+AGG | 0.516374 | 7_1:+63996187 | None:intergenic |
| TCTACAAAAGTTCAGTTCGG+TGG | 0.519730 | 7_1:-63994598 | Msa1030110:CDS |
| CAGTTCGGTGGAAAGAAAGC+AGG | 0.525207 | 7_1:-63994586 | Msa1030110:intron |
| GACAGTCTTTCTCGGTCAGA+AGG | 0.529609 | 7_1:-63996239 | Msa1030110:intron |
| AATGTGATTGGCCATTTGGA+TGG | 0.549742 | 7_1:-63994783 | Msa1030110:CDS |
| GGATAGGTTAAAGATAAGGT+TGG | 0.559820 | 7_1:+63996625 | None:intergenic |
| AGCATACACAATGTGGTAAG+TGG | 0.565442 | 7_1:+63994044 | None:intergenic |
| TTCGTAGATTAGCCATGTGA+GGG | 0.573720 | 7_1:+63993964 | None:intergenic |
| AATCACGAGAACCATCCAAA+TGG | 0.582644 | 7_1:+63994772 | None:intergenic |
| AATTGGTACCATATGTTGCA+AGG | 0.604327 | 7_1:-63993942 | Msa1030110:three_prime_UTR |
| TTTCGTAGATTAGCCATGTG+AGG | 0.612987 | 7_1:+63993963 | None:intergenic |
| AATGCTCACTCTCCCTCACA+TGG | 0.617837 | 7_1:-63993976 | Msa1030110:three_prime_UTR |
| AACTAACCGATTGCAAGTCG+AGG | 0.618872 | 7_1:+63994747 | None:intergenic |
| TATGAGATGCCAAAGAGCAA+AGG | 0.626582 | 7_1:+63993916 | None:intergenic |
| TTAAATCCATAGTTCCAGGA+GGG | 0.631727 | 7_1:+63994631 | None:intergenic |
| AATGTGGTAAGTGGTAAACA+TGG | 0.637460 | 7_1:+63994053 | None:intergenic |
| GTTGATGAGTCATTGGAGCA+AGG | 0.639313 | 7_1:-63994217 | Msa1030110:CDS |
| GAATGCTAGCATACACAATG+TGG | 0.683766 | 7_1:+63994037 | None:intergenic |
| CTTAAATCCATAGTTCCAGG+AGG | 0.685463 | 7_1:+63994630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTATTTTTTTAA+TGG | - | chr7_1:63998067-63998086 | Msa1030110:intron | 0.0% |
| !!! | TGTATACTTTTTTTTTTTAT+GGG | + | chr7_1:63994006-63994025 | None:intergenic | 10.0% |
| !!! | ATGTATACTTTTTTTTTTTA+TGG | + | chr7_1:63994007-63994026 | None:intergenic | 10.0% |
| !!! | AATTACATTGACATTTTTAA+AGG | + | chr7_1:63994066-63994085 | None:intergenic | 15.0% |
| !! | AAAGACAATAATTAAATTGA+TGG | - | chr7_1:63994482-63994501 | Msa1030110:intron | 15.0% |
| !!! | AACACTTTTAAGAAAAAATA+TGG | - | chr7_1:63994966-63994985 | Msa1030110:intron | 15.0% |
| !! | AATAAAAAACAACAAATCAA+AGG | + | chr7_1:63995200-63995219 | None:intergenic | 15.0% |
| !! | ATAAAATTAAAATCAATGGT+AGG | + | chr7_1:63996152-63996171 | None:intergenic | 15.0% |
| !! | GTAGATAAAATTAAAATCAA+TGG | + | chr7_1:63996156-63996175 | None:intergenic | 15.0% |
| !! | TTTAATTATTTGATATGTAC+AGG | - | chr7_1:63996218-63996237 | Msa1030110:CDS | 15.0% |
| !!! | CTCATTTTTAATATTCTTAA+AGG | - | chr7_1:63996489-63996508 | Msa1030110:intron | 15.0% |
| !!! | TTTTTAATATTCTTAAAGGT+TGG | - | chr7_1:63996493-63996512 | Msa1030110:intron | 15.0% |
| !!! | TTTTAATATTCTTAAAGGTT+GGG | - | chr7_1:63996494-63996513 | Msa1030110:intron | 15.0% |
| !!! | TATAAAGAGTTTTTAAGTAT+CGG | - | chr7_1:63996758-63996777 | Msa1030110:intron | 15.0% |
| !! | AATTAAGATATGTATAGTAA+GGG | - | chr7_1:63996899-63996918 | Msa1030110:intron | 15.0% |
| !! | CAAATTTCAAATACAAAAAA+AGG | + | chr7_1:63998035-63998054 | None:intergenic | 15.0% |
| !!! | ATTTTTATTTTTTTAATGGC+AGG | - | chr7_1:63998071-63998090 | Msa1030110:intron | 15.0% |
| !! | CTATAATAACAAAAAATTAG+TGG | + | chr7_1:63998230-63998249 | None:intergenic | 15.0% |
| !!! | TCTCTCTTTTTTTTTTTTGA+CGG | - | chr7_1:63993914-63993933 | Msa1030110:three_prime_UTR | 20.0% |
| !! | CAGACAAATTTAATATACTA+TGG | + | chr7_1:63994122-63994141 | None:intergenic | 20.0% |
| !! | AATCAACAAAATTTGTACTA+AGG | + | chr7_1:63994204-63994223 | None:intergenic | 20.0% |
| !!! | AAATTTTGTTGATTTAATGC+TGG | - | chr7_1:63994210-63994229 | Msa1030110:CDS | 20.0% |
| !!! | TGTTTTCTAAGTAAGATTTT+TGG | - | chr7_1:63994264-63994283 | Msa1030110:intron | 20.0% |
| !! | AAATAACATAAGTGATGAAA+GGG | + | chr7_1:63994742-63994761 | None:intergenic | 20.0% |
| !! | TAAATAACATAAGTGATGAA+AGG | + | chr7_1:63994743-63994762 | None:intergenic | 20.0% |
| !! | TTGTTTCAATAAAAGAAGAT+AGG | + | chr7_1:63995450-63995469 | None:intergenic | 20.0% |
| !!! | TTTAACTTAAAGCTAGAATT+TGG | + | chr7_1:63995917-63995936 | None:intergenic | 20.0% |
| !!! | TTGTACTTAAACTAATTTTG+TGG | - | chr7_1:63996016-63996035 | Msa1030110:intron | 20.0% |
| !!! | AAACATACATGAATTTTAGT+GGG | - | chr7_1:63996279-63996298 | Msa1030110:intron | 20.0% |
| !! | TGTTACAGTTTAGAAATTTA+TGG | - | chr7_1:63996590-63996609 | Msa1030110:intron | 20.0% |
| !!! | GAAATTTATGGATTTTTCTT+TGG | - | chr7_1:63996602-63996621 | Msa1030110:CDS | 20.0% |
| !! | TAAAAATTTCCACAAACTTA+AGG | + | chr7_1:63996628-63996647 | None:intergenic | 20.0% |
| !! | GAATTAAGATATGTATAGTA+AGG | - | chr7_1:63996898-63996917 | Msa1030110:intron | 20.0% |
| !! | AAGAGTTAAAAGAATTTCAA+CGG | + | chr7_1:63996974-63996993 | None:intergenic | 20.0% |
| !! | TTATCTAGGTTTACAAATTA+TGG | + | chr7_1:63997204-63997223 | None:intergenic | 20.0% |
| !! | CAAGATTTAAGTAATTATCT+AGG | + | chr7_1:63997218-63997237 | None:intergenic | 20.0% |
| !!! | TTTTCTATACATTTTAGTGA+TGG | - | chr7_1:63997274-63997293 | Msa1030110:intron | 20.0% |
| !! | AGTAACAAATTTGACTAAAA+TGG | - | chr7_1:63997899-63997918 | Msa1030110:intron | 20.0% |
| !! | ATGTCAATAGATTCAATTTA+GGG | - | chr7_1:63998160-63998179 | Msa1030110:intron | 20.0% |
| !! | ATAGAATTTCTCATAGATAA+AGG | + | chr7_1:63998421-63998440 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGACGGAAATCA+TGG | - | chr7_1:63993923-63993942 | Msa1030110:three_prime_UTR | 25.0% |
| !! | TTTTTGTCAACAAATACGAT+CGG | + | chr7_1:63993969-63993988 | None:intergenic | 25.0% |
| ! | TACTTAGAAAACACATATGA+AGG | + | chr7_1:63994257-63994276 | None:intergenic | 25.0% |
| ! | CAAGACTACTCATTATTATA+TGG | - | chr7_1:63994625-63994644 | Msa1030110:CDS | 25.0% |
| ! | AATAACATAAGTGATGAAAG+GGG | + | chr7_1:63994741-63994760 | None:intergenic | 25.0% |
| !! | CTCAAATTTAGTCTCTAAAA+TGG | + | chr7_1:63995068-63995087 | None:intergenic | 25.0% |
| !!! | GTATCAGATTATTTTTCTTG+TGG | + | chr7_1:63995405-63995424 | None:intergenic | 25.0% |
| ! | AAATAATTGACAGTCTTTCT+CGG | - | chr7_1:63996063-63996082 | Msa1030110:intron | 25.0% |
| ! | CTAAAATTCATGTATGTTTG+AGG | + | chr7_1:63996278-63996297 | None:intergenic | 25.0% |
| !! | CAAACATACATGAATTTTAG+TGG | - | chr7_1:63996278-63996297 | Msa1030110:intron | 25.0% |
| !!! | AACATACATGAATTTTAGTG+GGG | - | chr7_1:63996280-63996299 | Msa1030110:intron | 25.0% |
| ! | AAATACGTACAACTAGAATA+TGG | + | chr7_1:63996552-63996571 | None:intergenic | 25.0% |
| ! | TTTCTAAACTGTAACAAAAC+AGG | + | chr7_1:63996586-63996605 | None:intergenic | 25.0% |
| !! | GTTTGTGGAAATTTTTATGT+AGG | - | chr7_1:63996631-63996650 | Msa1030110:CDS | 25.0% |
| ! | TTACTTCATGAATAATGAGA+TGG | - | chr7_1:63996834-63996853 | Msa1030110:intron | 25.0% |
| !!! | TCTTTTAACTCTTAACAATG+AGG | - | chr7_1:63996981-63997000 | Msa1030110:intron | 25.0% |
| ! | TCTGTAAACCTAGATAAAAA+AGG | - | chr7_1:63997125-63997144 | Msa1030110:intron | 25.0% |
| ! | CTGTAAACCTAGATAAAAAA+GGG | - | chr7_1:63997126-63997145 | Msa1030110:intron | 25.0% |
| ! | TAATTACTTAAATCTTGCCA+TGG | - | chr7_1:63997221-63997240 | Msa1030110:intron | 25.0% |
| ! | AATTACTTAAATCTTGCCAT+GGG | - | chr7_1:63997222-63997241 | Msa1030110:intron | 25.0% |
| ! | AATATTATACATGTTACCCA+TGG | + | chr7_1:63997241-63997260 | None:intergenic | 25.0% |
| !! | TTTTATGGATAATACCAAGA+CGG | - | chr7_1:63997330-63997349 | Msa1030110:intron | 25.0% |
| !!! | TGCTTTTTCTTGACTTATTT+AGG | - | chr7_1:63997365-63997384 | Msa1030110:intron | 25.0% |
| ! | TTAAATAAGTCACGAAAACA+AGG | + | chr7_1:63997413-63997432 | None:intergenic | 25.0% |
| ! | GAAATTATGAAGTCTATAAC+TGG | - | chr7_1:63997480-63997499 | Msa1030110:intron | 25.0% |
| ! | TACAGATTGAAAAATGTGAT+TGG | - | chr7_1:63997515-63997534 | Msa1030110:intron | 25.0% |
| ! | TATACTCTGATAAATAACCA+AGG | + | chr7_1:63997622-63997641 | None:intergenic | 25.0% |
| !! | AAATTGCACTTTTACTTTGT+AGG | - | chr7_1:63997647-63997666 | Msa1030110:intron | 25.0% |
| ! | AGCAAATTATAAGTTAGACA+AGG | - | chr7_1:63997943-63997962 | Msa1030110:intron | 25.0% |
| !! | CAAAAAAAGGTATAATTTGC+AGG | + | chr7_1:63998022-63998041 | None:intergenic | 25.0% |
| ! | AATTGAATCTATTGACATGA+TGG | + | chr7_1:63998158-63998177 | None:intergenic | 25.0% |
| ! | CATGTCAATAGATTCAATTT+AGG | - | chr7_1:63998159-63998178 | Msa1030110:intron | 25.0% |
| ! | AAAATTAGTGGTGTACATTT+AGG | + | chr7_1:63998218-63998237 | None:intergenic | 25.0% |
| ! | CTATGATAGTGTTCAAGATT+TGG | - | chr7_1:63994029-63994048 | Msa1030110:intron | 30.0% |
| ! | GTATTGATAAATGCTATGAC+AGG | + | chr7_1:63994794-63994813 | None:intergenic | 30.0% |
| AATGATAGTAATAGCCATAG+AGG | - | chr7_1:63994921-63994940 | Msa1030110:intron | 30.0% | |
| ! | TTTTTGTGATGACAAAGAGA+TGG | - | chr7_1:63995126-63995145 | Msa1030110:intron | 30.0% |
| !!! | AAACCAAAGCAATTTTGGTT+GGG | + | chr7_1:63995235-63995254 | None:intergenic | 30.0% |
| CATTAACCAATAATATGCGA+GGG | + | chr7_1:63995538-63995557 | None:intergenic | 30.0% | |
| TAATGAAAGTTCCTTCTTCT+GGG | + | chr7_1:63995709-63995728 | None:intergenic | 30.0% | |
| ATAATGAAAGTTCCTTCTTC+TGG | + | chr7_1:63995710-63995729 | None:intergenic | 30.0% | |
| !! | GATGTTTTAAGTGAATAACG+AGG | + | chr7_1:63995733-63995752 | None:intergenic | 30.0% |
| ! | ATCATTTTCCGTTCATTGTT+CGG | - | chr7_1:63995756-63995775 | Msa1030110:intron | 30.0% |
| GTTCAACAGACAAATAACAA+TGG | - | chr7_1:63995778-63995797 | Msa1030110:intron | 30.0% | |
| CAATGGAGATACTAATAAAG+TGG | - | chr7_1:63995795-63995814 | Msa1030110:intron | 30.0% | |
| ATAAAGTGGAATATACTCCT+TGG | - | chr7_1:63995809-63995828 | Msa1030110:intron | 30.0% | |
| AAACACTTTAAGTGCATGTT+TGG | + | chr7_1:63995978-63995997 | None:intergenic | 30.0% | |
| ! | TTTTGTGGATTCTCTATGTT+AGG | - | chr7_1:63996031-63996050 | Msa1030110:intron | 30.0% |
| TCAATGTTGCAATTAACCAT+TGG | + | chr7_1:63996192-63996211 | None:intergenic | 30.0% | |
| TTGATATGTACAGGTTCTAT+TGG | - | chr7_1:63996227-63996246 | Msa1030110:CDS | 30.0% | |
| CTTACTGTGATTCATCAATT+TGG | - | chr7_1:63996440-63996459 | Msa1030110:intron | 30.0% | |
| ATGTAGGTTTATGATGAAAC+TGG | - | chr7_1:63996647-63996666 | Msa1030110:CDS | 30.0% | |
| !! | TGAAGCTTTAAAACACCATT+TGG | + | chr7_1:63996677-63996696 | None:intergenic | 30.0% |
| !!! | GTTTTAAAGCTTCAACCTAA+AGG | - | chr7_1:63996683-63996702 | Msa1030110:intron | 30.0% |
| CCTATTCTCGAAATCATATT+TGG | + | chr7_1:63996786-63996805 | None:intergenic | 30.0% | |
| CCAAATATGATTTCGAGAAT+AGG | - | chr7_1:63996783-63996802 | Msa1030110:intron | 30.0% | |
| AAGATATGTATAGTAAGGGT+TGG | - | chr7_1:63996903-63996922 | Msa1030110:intron | 30.0% | |
| AGATATGTATAGTAAGGGTT+GGG | - | chr7_1:63996904-63996923 | Msa1030110:intron | 30.0% | |
| TTTAACTCTTAACAATGAGG+AGG | - | chr7_1:63996984-63997003 | Msa1030110:intron | 30.0% | |
| CAGACAAGAAAATTCTACTT+TGG | + | chr7_1:63997058-63997077 | None:intergenic | 30.0% | |
| CTAGGTTTACAAATTATGGT+GGG | + | chr7_1:63997200-63997219 | None:intergenic | 30.0% | |
| TCTAGGTTTACAAATTATGG+TGG | + | chr7_1:63997201-63997220 | None:intergenic | 30.0% | |
| ! | TCGCAACTTCTATGATTTTA+TGG | - | chr7_1:63997315-63997334 | Msa1030110:intron | 30.0% |
| TTTATGGATAATACCAAGAC+GGG | - | chr7_1:63997331-63997350 | Msa1030110:intron | 30.0% | |
| TCATAATTTCCCAGTATAAG+AGG | + | chr7_1:63997470-63997489 | None:intergenic | 30.0% | |
| TTTATAAGCTGATATAGCCT+TGG | - | chr7_1:63997602-63997621 | Msa1030110:intron | 30.0% | |
| ! | CACTTTTACTTTGTAGGAAT+CGG | - | chr7_1:63997653-63997672 | Msa1030110:intron | 30.0% |
| TCTTCTACAAAAGTTCAGTT+CGG | - | chr7_1:63997709-63997728 | Msa1030110:intron | 30.0% | |
| ! | TGTCATTGCATAGAACTTTT+CGG | - | chr7_1:63997785-63997804 | Msa1030110:intron | 30.0% |
| TCCAAAGATAAGAGCAATTT+AGG | - | chr7_1:63997854-63997873 | Msa1030110:intron | 30.0% | |
| TCCTAAATTGCTCTTATCTT+TGG | + | chr7_1:63997858-63997877 | None:intergenic | 30.0% | |
| ! | GCAATTTAGGATTTAGTTTC+TGG | - | chr7_1:63997867-63997886 | Msa1030110:intron | 30.0% |
| AAGGCAAATATTTAGACAGT+TGG | - | chr7_1:63997962-63997981 | Msa1030110:intron | 30.0% | |
| !! | CAGATTATGCCATCATTTTT+AGG | + | chr7_1:63998302-63998321 | None:intergenic | 30.0% |
| !! | GGAGAAGAGTACATTTTTGT+CGG | + | chr7_1:63994816-63994835 | None:intergenic | 35.0% |
| GTGAACTTTGTGTTGAAAGT+TGG | + | chr7_1:63994837-63994856 | None:intergenic | 35.0% | |
| ACACAAAGTTCACAGTTAAG+TGG | - | chr7_1:63994844-63994863 | Msa1030110:intron | 35.0% | |
| ! | TTTTCGTGAGCATATGTCTT+CGG | - | chr7_1:63995009-63995028 | Msa1030110:intron | 35.0% |
| !! | CAAACCAAAGCAATTTTGGT+TGG | + | chr7_1:63995236-63995255 | None:intergenic | 35.0% |
| ! | AGCTCAAACCAAAGCAATTT+TGG | + | chr7_1:63995240-63995259 | None:intergenic | 35.0% |
| ATCAAGTCGTTGTAGTATAG+TGG | + | chr7_1:63995351-63995370 | None:intergenic | 35.0% | |
| ! | GAAGATAGGAGATTTTTCTC+TGG | + | chr7_1:63995436-63995455 | None:intergenic | 35.0% |
| CCATTAACCAATAATATGCG+AGG | + | chr7_1:63995539-63995558 | None:intergenic | 35.0% | |
| ! | CCTCGCATATTATTGGTTAA+TGG | - | chr7_1:63995536-63995555 | Msa1030110:intron | 35.0% |
| GTTAAAGATAAGGTTGGACT+TGG | + | chr7_1:63995682-63995701 | None:intergenic | 35.0% | |
| GGATAGGTTAAAGATAAGGT+TGG | + | chr7_1:63995688-63995707 | None:intergenic | 35.0% | |
| ! | TCTGGGATAGGTTAAAGATA+AGG | + | chr7_1:63995692-63995711 | None:intergenic | 35.0% |
| AACCCTGGAAATAAATACCA+TGG | - | chr7_1:63995850-63995869 | Msa1030110:intron | 35.0% | |
| TGCCATGGTATTTATTTCCA+GGG | + | chr7_1:63995855-63995874 | None:intergenic | 35.0% | |
| ATACAGTCAAAAGCCTTGAT+TGG | - | chr7_1:63996110-63996129 | Msa1030110:intron | 35.0% | |
| TCAAAAGCCTTGATTGGAAT+AGG | - | chr7_1:63996116-63996135 | Msa1030110:intron | 35.0% | |
| TACTATATCCAACCTTCCAA+TGG | - | chr7_1:63996173-63996192 | Msa1030110:intron | 35.0% | |
| TGTTGCAATTAACCATTGGA+AGG | + | chr7_1:63996188-63996207 | None:intergenic | 35.0% | |
| !! | CATGAATTTTAGTGGGGAAT+CGG | - | chr7_1:63996286-63996305 | Msa1030110:intron | 35.0% |
| !! | TTTCTTTGGCCTTAAGTTTG+TGG | - | chr7_1:63996616-63996635 | Msa1030110:CDS | 35.0% |
| !! | GCTTTAAAACACCATTTGGA+AGG | + | chr7_1:63996673-63996692 | None:intergenic | 35.0% |
| TTAAAGCTTCAACCTAAAGG+TGG | - | chr7_1:63996686-63996705 | Msa1030110:intron | 35.0% | |
| !! | ATTGTCGATGGTGTCATATA+AGG | - | chr7_1:63996936-63996955 | Msa1030110:intron | 35.0% |
| ATTATGTTCCAAGCATGACT+CGG | - | chr7_1:63997099-63997118 | Msa1030110:intron | 35.0% | |
| ! | GAAAAATGTGATTGGCCATT+TGG | - | chr7_1:63997523-63997542 | Msa1030110:intron | 35.0% |
| GGCTATATCAGCTTATAAAG+TGG | + | chr7_1:63997601-63997620 | None:intergenic | 35.0% | |
| TTAAATCCATAGTTCCAGGA+GGG | + | chr7_1:63997682-63997701 | None:intergenic | 35.0% | |
| TGACTAAAATGGCATAACTG+TGG | - | chr7_1:63997910-63997929 | Msa1030110:intron | 35.0% | |
| !! | ACACATCCTATTGCTTTTGT+AGG | + | chr7_1:63997993-63998012 | None:intergenic | 35.0% |
| TTAGGACTTTAGTGCTCAAT+GGG | - | chr7_1:63998127-63998146 | Msa1030110:intron | 35.0% | |
| AATGTGGTAAGTGGTAAACA+TGG | + | chr7_1:63998260-63998279 | None:intergenic | 35.0% | |
| GCATTCTCACCTAAAAATGA+TGG | - | chr7_1:63998290-63998309 | Msa1030110:intron | 35.0% | |
| ACATGGCTAATCTACGAAAT+TGG | - | chr7_1:63998351-63998370 | Msa1030110:intron | 35.0% | |
| AATTGGTACCATATGTTGCA+AGG | - | chr7_1:63998368-63998387 | Msa1030110:intron | 35.0% | |
| ! | TTTTGACGGAAATCATGGAG+AGG | - | chr7_1:63993928-63993947 | Msa1030110:three_prime_UTR | 40.0% |
| ACTCTATGACAAACCTTTGG+GGG | + | chr7_1:63994335-63994354 | None:intergenic | 40.0% | |
| CACTCTATGACAAACCTTTG+GGG | + | chr7_1:63994336-63994355 | None:intergenic | 40.0% | |
| GCACTCTATGACAAACCTTT+GGG | + | chr7_1:63994337-63994356 | None:intergenic | 40.0% | |
| AGCACTCTATGACAAACCTT+TGG | + | chr7_1:63994338-63994357 | None:intergenic | 40.0% | |
| !! | CATAGAGTGCTGCAAATGAT+TGG | - | chr7_1:63994347-63994366 | Msa1030110:intron | 40.0% |
| CTTTCGGGATAACATTTGTC+GGG | + | chr7_1:63994665-63994684 | None:intergenic | 40.0% | |
| GCTTTCGGGATAACATTTGT+CGG | + | chr7_1:63994666-63994685 | None:intergenic | 40.0% | |
| TAAATGCTATGACAGGCTGA+AGG | + | chr7_1:63994787-63994806 | None:intergenic | 40.0% | |
| ! | CTATTCTACCATCACTGGTT+GGG | + | chr7_1:63994876-63994895 | None:intergenic | 40.0% |
| ACTATTCTACCATCACTGGT+TGG | + | chr7_1:63994877-63994896 | None:intergenic | 40.0% | |
| ACCAGTGATGGTAGAATAGT+TGG | - | chr7_1:63994877-63994896 | Msa1030110:intron | 40.0% | |
| CCAGTGATGGTAGAATAGTT+GGG | - | chr7_1:63994878-63994897 | Msa1030110:intron | 40.0% | |
| TAATAGCCATAGAGGACTTG+AGG | - | chr7_1:63994929-63994948 | Msa1030110:intron | 40.0% | |
| ATAGAACCTCAAGTCCTCTA+TGG | + | chr7_1:63994938-63994957 | None:intergenic | 40.0% | |
| TTTCGTGAGCATATGTCTTC+GGG | - | chr7_1:63995010-63995029 | Msa1030110:intron | 40.0% | |
| TCACCCAACCAAAATTGCTT+TGG | - | chr7_1:63995229-63995248 | Msa1030110:intron | 40.0% | |
| TGCTTTCCCTCGCATATTAT+TGG | - | chr7_1:63995529-63995548 | Msa1030110:intron | 40.0% | |
| CTTTAACCTATCCCAGAAGA+AGG | - | chr7_1:63995695-63995714 | Msa1030110:intron | 40.0% | |
| !! | AAAGTTCCTTCTTCTGGGAT+AGG | + | chr7_1:63995704-63995723 | None:intergenic | 40.0% |
| CTGTTGAACCGAACAATGAA+CGG | + | chr7_1:63995767-63995786 | None:intergenic | 40.0% | |
| !! | TATACTCCTTGGCTTGTTGT+TGG | - | chr7_1:63995820-63995839 | Msa1030110:intron | 40.0% |
| GTGCCATGGTATTTATTTCC+AGG | + | chr7_1:63995856-63995875 | None:intergenic | 40.0% | |
| TTACATTGTGTCTAGTGCCA+TGG | + | chr7_1:63995870-63995889 | None:intergenic | 40.0% | |
| GTGGATTCTCTATGTTAGGT+TGG | - | chr7_1:63996035-63996054 | Msa1030110:intron | 40.0% | |
| GCAATTAACCATTGGAAGGT+TGG | + | chr7_1:63996184-63996203 | None:intergenic | 40.0% | |
| !!! | TGGAGAAGTACCAGTTTTGT+TGG | - | chr7_1:63996247-63996266 | Msa1030110:intron | 40.0% |
| ACTCGATAATATGCAGCAAG+TGG | + | chr7_1:63996520-63996539 | None:intergenic | 40.0% | |
| ACAACTAGAATATGGCGCAA+AGG | + | chr7_1:63996544-63996563 | None:intergenic | 40.0% | |
| TTCAACCTAAAGGTGGACAT+GGG | - | chr7_1:63996693-63996712 | Msa1030110:intron | 40.0% | |
| AACTCTTAACAATGAGGAGG+TGG | - | chr7_1:63996987-63997006 | Msa1030110:intron | 40.0% | |
| AATGAGGAGGTGGTATTATG+TGG | - | chr7_1:63996997-63997016 | Msa1030110:intron | 40.0% | |
| ATGAGGAGGTGGTATTATGT+GGG | - | chr7_1:63996998-63997017 | Msa1030110:intron | 40.0% | |
| CTAGATAAAAAAGGGCAACC+CGG | - | chr7_1:63997134-63997153 | Msa1030110:intron | 40.0% | |
| TAAGTCCTCTCCTCTTATAC+TGG | - | chr7_1:63997457-63997476 | Msa1030110:intron | 40.0% | |
| AAGTCCTCTCCTCTTATACT+GGG | - | chr7_1:63997458-63997477 | Msa1030110:intron | 40.0% | |
| ATTTCCCAGTATAAGAGGAG+AGG | + | chr7_1:63997465-63997484 | None:intergenic | 40.0% | |
| ! | AATGTGATTGGCCATTTGGA+TGG | - | chr7_1:63997527-63997546 | Msa1030110:intron | 40.0% |
| AATCACGAGAACCATCCAAA+TGG | + | chr7_1:63997541-63997560 | None:intergenic | 40.0% | |
| !! | GATTTTCCTCGACTTGCAAT+CGG | - | chr7_1:63997557-63997576 | Msa1030110:intron | 40.0% |
| CTTAAATCCATAGTTCCAGG+AGG | + | chr7_1:63997683-63997702 | None:intergenic | 40.0% | |
| GCTCTTAAATCCATAGTTCC+AGG | + | chr7_1:63997686-63997705 | None:intergenic | 40.0% | |
| TCTACAAAAGTTCAGTTCGG+TGG | - | chr7_1:63997712-63997731 | Msa1030110:intron | 40.0% | |
| ACGCTTGATAGAAGACTAGA+AGG | + | chr7_1:63997755-63997774 | None:intergenic | 40.0% | |
| GTGTGACCTACAAAAGCAAT+AGG | - | chr7_1:63997984-63998003 | Msa1030110:intron | 40.0% | |
| GTTAGGACTTTAGTGCTCAA+TGG | - | chr7_1:63998126-63998145 | Msa1030110:intron | 40.0% | |
| AGCATACACAATGTGGTAAG+TGG | + | chr7_1:63998269-63998288 | None:intergenic | 40.0% | |
| GAATGCTAGCATACACAATG+TGG | + | chr7_1:63998276-63998295 | None:intergenic | 40.0% | |
| ! | TTCGTAGATTAGCCATGTGA+GGG | + | chr7_1:63998349-63998368 | None:intergenic | 40.0% |
| ! | TTTCGTAGATTAGCCATGTG+AGG | + | chr7_1:63998350-63998369 | None:intergenic | 40.0% |
| AAAGGTTGCCTTGCAACATA+TGG | + | chr7_1:63998379-63998398 | None:intergenic | 40.0% | |
| TATGAGATGCCAAAGAGCAA+AGG | + | chr7_1:63998397-63998416 | None:intergenic | 40.0% | |
| ATTTCAGTCTAGTCCCCCAA+AGG | - | chr7_1:63994319-63994338 | Msa1030110:intron | 45.0% | |
| !! | AGAGTGCTGCAAATGATTGG+TGG | - | chr7_1:63994350-63994369 | Msa1030110:intron | 45.0% |
| CATCCCGACAGATGTGTTAT+GGG | - | chr7_1:63994685-63994704 | Msa1030110:intron | 45.0% | |
| AGTGCCCATAACACATCTGT+CGG | + | chr7_1:63994692-63994711 | None:intergenic | 45.0% | |
| CCCAACTATTCTACCATCAC+TGG | + | chr7_1:63994881-63994900 | None:intergenic | 45.0% | |
| TCAAAAAACATCGCCGTTGC+CGG | - | chr7_1:63995283-63995302 | Msa1030110:intron | 45.0% | |
| CTTTCTCTTCTCCACTCACT+CGG | - | chr7_1:63995488-63995507 | Msa1030110:intron | 45.0% | |
| CGATGCACCTATTCCAATCA+AGG | + | chr7_1:63996126-63996145 | None:intergenic | 45.0% | |
| TGAGGTTTCGCCAACAAAAC+TGG | + | chr7_1:63996260-63996279 | None:intergenic | 45.0% | |
| AGACACACGCACACTGAAAT+TGG | - | chr7_1:63996361-63996380 | Msa1030110:intron | 45.0% | |
| ACGCACACTGAAATTGGTCA+TGG | - | chr7_1:63996367-63996386 | Msa1030110:intron | 45.0% | |
| !! | GATGAAACTGGCCTTCCAAA+TGG | - | chr7_1:63996659-63996678 | Msa1030110:CDS | 45.0% |
| CTTCAACCTAAAGGTGGACA+TGG | - | chr7_1:63996692-63996711 | Msa1030110:intron | 45.0% | |
| ATAGTAAGGGTTGGGCTTCT+AGG | - | chr7_1:63996912-63996931 | Msa1030110:intron | 45.0% | |
| TAGTAAGGGTTGGGCTTCTA+GGG | - | chr7_1:63996913-63996932 | Msa1030110:intron | 45.0% | |
| !! | GTCGATGGTGTCATATAAGG+CGG | - | chr7_1:63996939-63996958 | Msa1030110:intron | 45.0% |
| ! | TGTGGGAATAGCTTTACCAC+TGG | - | chr7_1:63997015-63997034 | Msa1030110:intron | 45.0% |
| GTTGTAGCAACTACTACCAG+TGG | + | chr7_1:63997034-63997053 | None:intergenic | 45.0% | |
| ACAGATTACCGAGTCATGCT+TGG | + | chr7_1:63997110-63997129 | None:intergenic | 45.0% | |
| !!! | CGGGTTGCCCTTTTTTATCT+AGG | + | chr7_1:63997136-63997155 | None:intergenic | 45.0% |
| CAATATAGAGATGCCCGTCT+TGG | + | chr7_1:63997347-63997366 | None:intergenic | 45.0% | |
| AACTAACCGATTGCAAGTCG+AGG | + | chr7_1:63997566-63997585 | None:intergenic | 45.0% | |
| !! | ATGGCAGGTTGATGAGTCAT+TGG | - | chr7_1:63998086-63998105 | Msa1030110:intron | 45.0% |
| ! | GTTGATGAGTCATTGGAGCA+AGG | - | chr7_1:63998093-63998112 | Msa1030110:intron | 45.0% |
| AGCAAGGAGTTCAAGCTGTT+AGG | - | chr7_1:63998109-63998128 | Msa1030110:intron | 45.0% | |
| GACGGAAATCATGGAGAGGT+TGG | - | chr7_1:63993932-63993951 | Msa1030110:three_prime_UTR | 50.0% | |
| ACATCTGTCGGGATGCTTTC+GGG | + | chr7_1:63994680-63994699 | None:intergenic | 50.0% | |
| CACATCTGTCGGGATGCTTT+CGG | + | chr7_1:63994681-63994700 | None:intergenic | 50.0% | |
| GCATCCCGACAGATGTGTTA+TGG | - | chr7_1:63994684-63994703 | Msa1030110:intron | 50.0% | |
| GTGCCCATAACACATCTGTC+GGG | + | chr7_1:63994691-63994710 | None:intergenic | 50.0% | |
| CAAAAAACATCGCCGTTGCC+GGG | - | chr7_1:63995284-63995303 | Msa1030110:intron | 50.0% | |
| AAAAAACATCGCCGTTGCCG+GGG | - | chr7_1:63995285-63995304 | Msa1030110:intron | 50.0% | |
| GTGGAGAAGAGAAAGCGAAG+AGG | + | chr7_1:63995483-63995502 | None:intergenic | 50.0% | |
| CTGAATAGTAGCCGAGTGAG+TGG | + | chr7_1:63995502-63995521 | None:intergenic | 50.0% | |
| !! | TCCTTGGCTTGTTGTTGGCT+TGG | - | chr7_1:63995825-63995844 | Msa1030110:intron | 50.0% |
| !! | CCTTGGCTTGTTGTTGGCTT+GGG | - | chr7_1:63995826-63995845 | Msa1030110:intron | 50.0% |
| GACAGTCTTTCTCGGTCAGA+AGG | - | chr7_1:63996071-63996090 | Msa1030110:CDS | 50.0% | |
| TGATGCCCATGTCCACCTTT+AGG | + | chr7_1:63996701-63996720 | None:intergenic | 50.0% | |
| GTGGACATGGGCATCACAAT+GGG | - | chr7_1:63996705-63996724 | Msa1030110:intron | 50.0% | |
| GTCATATAAGGCGGACACGA+AGG | - | chr7_1:63996948-63996967 | Msa1030110:intron | 50.0% | |
| ! | CAGTTCGGTGGAAAGAAAGC+AGG | - | chr7_1:63997724-63997743 | Msa1030110:intron | 50.0% |
| AATGCTCACTCTCCCTCACA+TGG | - | chr7_1:63998334-63998353 | Msa1030110:intron | 50.0% | |
| GCAAGGCAACCTTTGCTCTT+TGG | - | chr7_1:63998385-63998404 | Msa1030110:intron | 50.0% | |
| GGCACAATCCCAACCAGTGA+TGG | - | chr7_1:63994865-63994884 | Msa1030110:intron | 55.0% | |
| TGGTTTGAGCTCGACCTGTG+CGG | - | chr7_1:63995249-63995268 | Msa1030110:intron | 55.0% | |
| AAGTATTCCCGCCTGTCACG+CGG | + | chr7_1:63995327-63995346 | None:intergenic | 55.0% | |
| CCCAAGCCAACAACAAGCCA+AGG | + | chr7_1:63995829-63995848 | None:intergenic | 55.0% | |
| !! | GTTGTTGGCTTGGGTAACCC+TGG | - | chr7_1:63995835-63995854 | Msa1030110:intron | 55.0% |
| GGTGGACATGGGCATCACAA+TGG | - | chr7_1:63996704-63996723 | Msa1030110:intron | 55.0% | |
| ! | GGGCTTCTAGGGATTGTCGA+TGG | - | chr7_1:63996924-63996943 | Msa1030110:intron | 55.0% |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr7_1:63997160-63997179 | Msa1030110:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr7_1:63997161-63997180 | Msa1030110:intron | 55.0% | |
| ! | ATTATGGTGGGACCCCTTCC+CGG | + | chr7_1:63997188-63997207 | None:intergenic | 55.0% |
| GTAGGAATCGGAAACCCTCC+TGG | - | chr7_1:63997665-63997684 | Msa1030110:intron | 55.0% | |
| CGGAAACCCTCCTGGAACTA+TGG | - | chr7_1:63997673-63997692 | Msa1030110:intron | 55.0% | |
| AGTATTCCCGCCTGTCACGC+GGG | + | chr7_1:63995326-63995345 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr7_1:63997156-63997175 | None:intergenic | 60.0% |
| TTCCCGGACCCTGCATATGC+GGG | + | chr7_1:63997172-63997191 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr7_1:63997173-63997192 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr7_1:63997172-63997191 | Msa1030110:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr7_1:63997173-63997192 | Msa1030110:intron | 60.0% | |
| TGAAGCAGCGCACACCGCAC+AGG | + | chr7_1:63995266-63995285 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr7_1:63997155-63997174 | None:intergenic | 65.0% |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr7_1:63997166-63997185 | Msa1030110:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr7_1:63997167-63997186 | Msa1030110:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr7_1:63997171-63997190 | Msa1030110:intron | 65.0% | |
| CCGGGTTCGATCCCCGGCAA+CGG | + | chr7_1:63995299-63995318 | None:intergenic | 70.0% | |
| CCGTTGCCGGGGATCGAACC+CGG | - | chr7_1:63995296-63995315 | Msa1030110:intron | 70.0% | |
| CGTTGCCGGGGATCGAACCC+GGG | - | chr7_1:63995297-63995316 | Msa1030110:intron | 70.0% | |
| GGTGACCCGGGTTCGATCCC+CGG | + | chr7_1:63995305-63995324 | None:intergenic | 70.0% | |
| ACCCGGGTCACCCGCGTGAC+AGG | - | chr7_1:63995313-63995332 | Msa1030110:intron | 75.0% | |
| GCCTGTCACGCGGGTGACCC+GGG | + | chr7_1:63995317-63995336 | None:intergenic | 75.0% | |
| CGCCTGTCACGCGGGTGACC+CGG | + | chr7_1:63995318-63995337 | None:intergenic | 75.0% | |
| CGGGTCACCCGCGTGACAGG+CGG | - | chr7_1:63995316-63995335 | Msa1030110:intron | 75.0% | |
| GGGTCACCCGCGTGACAGGC+GGG | - | chr7_1:63995317-63995336 | Msa1030110:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 63993875 | 63998457 | 63993875 | ID=Msa1030110;Name=Msa1030110 |
| chr7_1 | mRNA | 63993875 | 63998457 | 63993875 | ID=Msa1030110-mRNA-1;Parent=Msa1030110;Name=Msa1030110-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.57|0.5|0.87|0.42|0.25|8|215|141 |
| chr7_1 | exon | 63993875 | 63994007 | 63993875 | ID=Msa1030110-mRNA-1:exon:14003;Parent=Msa1030110-mRNA-1 |
| chr7_1 | exon | 63994041 | 63994239 | 63994041 | ID=Msa1030110-mRNA-1:exon:14002;Parent=Msa1030110-mRNA-1 |
| chr7_1 | exon | 63994587 | 63994663 | 63994587 | ID=Msa1030110-mRNA-1:exon:14001;Parent=Msa1030110-mRNA-1 |
| chr7_1 | exon | 63994754 | 63994812 | 63994754 | ID=Msa1030110-mRNA-1:exon:14000;Parent=Msa1030110-mRNA-1 |
| chr7_1 | exon | 63996068 | 63996092 | 63996068 | ID=Msa1030110-mRNA-1:exon:13999;Parent=Msa1030110-mRNA-1 |
| chr7_1 | exon | 63996195 | 63996256 | 63996195 | ID=Msa1030110-mRNA-1:exon:13998;Parent=Msa1030110-mRNA-1 |
| chr7_1 | exon | 63996599 | 63996678 | 63996599 | ID=Msa1030110-mRNA-1:exon:13997;Parent=Msa1030110-mRNA-1 |
| chr7_1 | exon | 63998452 | 63998457 | 63998452 | ID=Msa1030110-mRNA-1:exon:13996;Parent=Msa1030110-mRNA-1 |
| chr7_1 | CDS | 63998452 | 63998457 | 63998452 | ID=Msa1030110-mRNA-1:cds;Parent=Msa1030110-mRNA-1 |
| chr7_1 | CDS | 63996599 | 63996678 | 63996599 | ID=Msa1030110-mRNA-1:cds;Parent=Msa1030110-mRNA-1 |
| chr7_1 | CDS | 63996195 | 63996256 | 63996195 | ID=Msa1030110-mRNA-1:cds;Parent=Msa1030110-mRNA-1 |
| chr7_1 | CDS | 63996068 | 63996092 | 63996068 | ID=Msa1030110-mRNA-1:cds;Parent=Msa1030110-mRNA-1 |
| chr7_1 | CDS | 63994754 | 63994812 | 63994754 | ID=Msa1030110-mRNA-1:cds;Parent=Msa1030110-mRNA-1 |
| chr7_1 | CDS | 63994587 | 63994663 | 63994587 | ID=Msa1030110-mRNA-1:cds;Parent=Msa1030110-mRNA-1 |
| chr7_1 | CDS | 63994123 | 63994239 | 63994123 | ID=Msa1030110-mRNA-1:cds;Parent=Msa1030110-mRNA-1 |
| chr7_1 | three_prime_UTR | 63994041 | 63994122 | 63994041 | ID=Msa1030110-mRNA-1:three_prime_utr;Parent=Msa1030110-mRNA-1 |
| chr7_1 | three_prime_UTR | 63993875 | 63994007 | 63993875 | ID=Msa1030110-mRNA-1:three_prime_utr;Parent=Msa1030110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
