AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0213020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0213020 MtrunA17_Chr2g0312621 98.043 1022 19 1 1 1022 1 1021 0.0 2011
Msa0213020 MtrunA17_Chr5g0412261 42.166 517 278 8 496 1003 200 704 2.86e-110 358
Msa0213020 MtrunA17_Chr1g0202021 27.869 488 264 17 496 922 750 1210 4.55e-28 122
Msa0213020 MtrunA17_Chr1g0201991 27.447 470 256 16 496 903 235 681 3.25e-27 119
Msa0213020 MtrunA17_Chr3g0130991 27.679 224 138 6 500 707 86 301 7.31e-14 75.9
Msa0213020 MtrunA17_Chr7g0264901 24.335 263 145 7 496 710 36 292 1.33e-13 73.9
Msa0213020 MtrunA17_Chr4g0000221 37.500 120 69 3 496 615 39 152 4.87e-12 69.7
Msa0213020 MtrunA17_Chr2g0287231 32.955 176 99 5 496 652 14 189 9.71e-12 66.2
Msa0213020 MtrunA17_Chr1g0173551 28.514 249 149 8 488 709 71 317 9.92e-12 69.3
Msa0213020 MtrunA17_Chr5g0411001 37.755 98 58 1 664 761 1 95 1.42e-11 63.2
Msa0213020 MtrunA17_Chr7g0216911 25.547 274 164 7 481 723 47 311 1.80e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0213020 AT1G17220.1 66.698 1063 271 21 1 1021 4 1025 0.0 1269
Msa0213020 AT4G11160.1 42.442 516 284 3 496 1003 216 726 7.59e-120 385
Msa0213020 AT4G11160.2 42.442 516 284 3 496 1003 218 728 1.23e-119 384
Msa0213020 AT4G11160.3 48.225 338 168 3 496 831 218 550 4.43e-88 294
Msa0213020 AT1G76810.1 28.803 493 241 18 474 894 687 1141 9.83e-27 119
Msa0213020 AT1G21160.1 28.571 497 244 19 474 897 478 936 2.96e-26 117
Msa0213020 AT1G76720.2 26.752 471 237 15 496 897 660 1091 5.70e-24 109
Msa0213020 AT1G76720.1 26.752 471 237 15 496 897 627 1058 6.37e-24 109
Msa0213020 AT2G27700.2 25.949 474 273 15 481 897 24 476 1.84e-22 102
Msa0213020 AT2G27700.1 25.949 474 272 16 481 897 24 475 3.31e-21 99.0
Msa0213020 AT5G13650.2 28.929 280 159 11 470 720 65 333 3.18e-13 74.3
Msa0213020 AT5G13650.1 27.376 263 163 8 485 720 71 332 3.87e-13 74.3
Msa0213020 AT5G08650.2 25.778 225 137 6 500 705 89 302 6.83e-12 70.1
Msa0213020 AT5G08650.1 25.778 225 137 6 500 705 89 302 7.84e-12 70.1

Find 323 sgRNAs with CRISPR-Local

Find 646 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATCACAATTTCCTTTC+TGG 0.053776 2_1:+55503571 Msa0213020:five_prime_UTR
GTTTCGTCAGGAAAGCTTTC+TGG 0.148153 2_1:+55507419 Msa0213020:CDS
TTCACCACCATTCGTCTTCT+TGG 0.161247 2_1:-55504741 None:intergenic
TCTAGAATTTCAACCTTTAC+AGG 0.192323 2_1:-55504894 None:intergenic
TATGCATCACTGCAGGTTAT+TGG 0.202118 2_1:+55507236 Msa0213020:intron
TGTATGATGCTCTTGATTAA+TGG 0.204217 2_1:+55511330 Msa0213020:three_prime_UTR
TCCTAAAATCGAGTCATTAT+TGG 0.208560 2_1:-55504028 None:intergenic
GAAGAATGTTGATGATCTTT+TGG 0.218846 2_1:+55506543 Msa0213020:CDS
GAACATGCATATAAGGATTC+TGG 0.244011 2_1:-55503488 None:intergenic
TAACAGGTGGCGGTGGCGGC+GGG 0.257318 2_1:-55504488 None:intergenic
TGAATCACTTGGCGAGGTTT+TGG 0.261604 2_1:+55504125 Msa0213020:CDS
GAAGAACTACCTAAACTTAT+TGG 0.263515 2_1:-55503736 None:intergenic
TAGGATCGAGTTCGGGTTTA+GGG 0.273196 2_1:+55504046 Msa0213020:CDS
TTCCTTTCTTTAGACTTAAC+AGG 0.290865 2_1:-55504558 None:intergenic
TTAGGATCGAGTTCGGGTTT+AGG 0.291090 2_1:+55504045 Msa0213020:CDS
TGATGAAAATGAAGAATTAA+TGG 0.291474 2_1:-55503556 None:intergenic
CAAAGACGCTGAAGAGTATT+TGG 0.293099 2_1:+55504283 Msa0213020:CDS
TGAAGTAGAACATGCATATA+AGG 0.305768 2_1:-55503495 None:intergenic
TTTGGAGAAGGCAGAGAAGT+TGG 0.306732 2_1:+55504143 Msa0213020:CDS
TCTCTTCTCAACTGTGTTGA+AGG 0.307014 2_1:-55510945 None:intergenic
AATCATCTTTATACCTTCCT+TGG 0.309069 2_1:-55504683 None:intergenic
GTTTGGTTGGGATAACCTTA+TGG 0.309963 2_1:-55503344 None:intergenic
TATATGATCCTGTAGGCATT+TGG 0.311180 2_1:+55505877 Msa0213020:intron
AAGTTGGAGAATTCTAAGTT+AGG 0.313771 2_1:+55504159 Msa0213020:CDS
CTTGCTTCACCAATAAGTTT+AGG 0.314425 2_1:+55503727 Msa0213020:CDS
GGAGGAGTTGGCGTACAATT+TGG 0.315224 2_1:+55504941 Msa0213020:CDS
TTCATCACAATTTCCTTTCT+GGG 0.315587 2_1:+55503572 Msa0213020:five_prime_UTR
GTGGGATCACACAGGGAATT+GGG 0.322065 2_1:+55505455 Msa0213020:CDS
TTATTATCCTTCAAGATAAC+AGG 0.324824 2_1:-55504516 None:intergenic
ATATGATCCTGTAGGCATTT+GGG 0.327114 2_1:+55505878 Msa0213020:intron
CTTAATATGCTTATATTAGT+TGG 0.329084 2_1:+55503676 Msa0213020:exon
GTCATTCCAATTCTCAACTT+TGG 0.329516 2_1:+55503594 Msa0213020:five_prime_UTR
AATGGGTACTCCTGCTGCTT+TGG 0.330661 2_1:-55506001 None:intergenic
TCATTCCAATTCTCAACTTT+GGG 0.333584 2_1:+55503595 Msa0213020:five_prime_UTR
CTTGTTTATAGCAATTATAA+TGG 0.335820 2_1:-55506019 None:intergenic
GATGAGAATGGTTCCTATCT+TGG 0.341007 2_1:+55511057 Msa0213020:three_prime_UTR
ATGTCACCACCCCAGTCTTC+TGG 0.342013 2_1:-55506392 None:intergenic
ACATACCCAAAGTTGAGAAT+TGG 0.348024 2_1:-55503600 None:intergenic
GTAGTTTGTGGAGGAGCTTT+TGG 0.352651 2_1:+55506827 Msa0213020:CDS
CGGAAGAAAGGTGCTTCGTC+TGG 0.355125 2_1:+55504708 Msa0213020:CDS
TGAAGAGTATTTGGCGTAAA+GGG 0.359780 2_1:+55504292 Msa0213020:CDS
TCGCAAGGCGGTACGACTTC+AGG 0.360780 2_1:+55504854 Msa0213020:CDS
TGGTGACATCCCGATGGTTC+AGG 0.362886 2_1:+55506406 Msa0213020:CDS
TGCAGAATGGGTCACTTAGA+AGG 0.363570 2_1:+55506795 Msa0213020:CDS
AGTGGTAGCGGTCGTGTTGC+CGG 0.365171 2_1:+55509306 Msa0213020:CDS
TTAACAGGTGGCGGTGGCGG+CGG 0.367142 2_1:-55504489 None:intergenic
TTTCTCTTTCTAGTTCTAGA+AGG 0.367268 2_1:+55503788 Msa0213020:CDS
GTGCCCTTCGCACTTCTATC+AGG 0.367859 2_1:-55506719 None:intergenic
ATGCAAGAGCTTTCTTCAAT+TGG 0.368640 2_1:+55506362 Msa0213020:CDS
GGTGGGATCACACAGGGAAT+TGG 0.368866 2_1:+55505454 Msa0213020:CDS
AGGGGAGATATTGTAGTTTG+TGG 0.369257 2_1:+55506815 Msa0213020:CDS
TTGAATAATGTTCCAGTTGC+TGG 0.370168 2_1:+55507260 Msa0213020:CDS
ATCATCTTTATACCTTCCTT+GGG 0.371193 2_1:-55504682 None:intergenic
TCTAGAGTTTGCACCCCATC+TGG 0.371305 2_1:-55505014 None:intergenic
CCTTGGGGAGGAGCCTTCCC+TGG 0.377250 2_1:-55504666 None:intergenic
AGTTGGAGAATTCTAAGTTA+GGG 0.377494 2_1:+55504160 Msa0213020:CDS
CGTCCCTTTCTTGCAGTGCC+GGG 0.379881 2_1:-55504813 None:intergenic
GCCGATCCTTTCAAAGTTGA+AGG 0.384110 2_1:+55505089 Msa0213020:CDS
AATGATGATAGTAATAATAA+AGG 0.391280 2_1:+55503931 Msa0213020:CDS
TTCTTTCCTTGTCTTATATG+TGG 0.391342 2_1:-55511274 None:intergenic
TTGGTTTGATGCCAGAAGAC+TGG 0.392912 2_1:+55506381 Msa0213020:CDS
CCGTCCCTTTCTTGCAGTGC+CGG 0.393059 2_1:-55504814 None:intergenic
TTGTTTATAGCAATTATAAT+GGG 0.393547 2_1:-55506018 None:intergenic
AGTTCTAGAAGGAATTGTAT+AGG 0.394003 2_1:+55503799 Msa0213020:CDS
GAACTCAATGTCTCTATTCC+CGG 0.396298 2_1:+55504795 Msa0213020:CDS
TCTCAACTTTGGGTATGTTA+AGG 0.396321 2_1:+55503605 Msa0213020:five_prime_UTR
CAGACGAAGCACCTTTCTTC+CGG 0.399055 2_1:-55504707 None:intergenic
TCATTCATAACCGGTCTTGC+CGG 0.400481 2_1:-55504213 None:intergenic
CGTTAGAAGACTATGATGAT+TGG 0.403820 2_1:+55510900 Msa0213020:CDS
GTTCTAGAAGGAATTGTATA+GGG 0.406514 2_1:+55503800 Msa0213020:CDS
GCTATAGCTTCATTTGTTTG+AGG 0.407301 2_1:-55505973 None:intergenic
GGCTTGTTTGACGGCTTCAA+TGG 0.407565 2_1:-55508560 None:intergenic
GCCACATTTATTGTGCAGAA+TGG 0.410961 2_1:+55506782 Msa0213020:CDS
CGGTCGTGTTGCCGGATGTA+TGG 0.415767 2_1:+55509314 Msa0213020:CDS
GATTTACCTCAACAGAATCT+AGG 0.416256 2_1:-55508816 None:intergenic
TATCTTGTGGTAGCACCTGC+AGG 0.416503 2_1:-55508582 None:intergenic
CGTATTTCTGCTGAGCCAAT+TGG 0.417906 2_1:-55509270 None:intergenic
GAAGGTATAAAGATGATTAC+CGG 0.419971 2_1:+55504688 Msa0213020:CDS
AAAGTGCAAGTACCTGTTGA+TGG 0.420669 2_1:+55505484 Msa0213020:CDS
TTGGACTTCAACACAGGCTT+AGG 0.420923 2_1:-55504009 None:intergenic
CCCATCTGGCTTAACTCCCT+TGG 0.422411 2_1:-55505000 None:intergenic
TATTCCCGGCACTGCAAGAA+AGG 0.423009 2_1:+55504809 Msa0213020:CDS
TTAGCTTCTGCAGTTTCGTC+AGG 0.427043 2_1:+55507407 Msa0213020:CDS
GCCTCCTGTTATTACTATCA+TGG 0.429021 2_1:+55505169 Msa0213020:CDS
GTGGTGTTACAAGTATTTCT+AGG 0.432121 2_1:-55511252 None:intergenic
TTGATGCTGAGGCTTCTTCA+AGG 0.432721 2_1:-55510973 None:intergenic
TTAGGTTTATCATTCATAAC+CGG 0.434184 2_1:-55504222 None:intergenic
AGCTCTTGCATAACTCGGTC+TGG 0.436297 2_1:-55506350 None:intergenic
CTCAACCGATGTTACAATCT+AGG 0.437562 2_1:+55504454 Msa0213020:CDS
CACCTGCAGGGCTTGTTTGA+CGG 0.437841 2_1:-55508569 None:intergenic
CAATTGGCTCAGCAGAAATA+CGG 0.438621 2_1:+55509271 Msa0213020:CDS
CCACATTTATTGTGCAGAAT+GGG 0.441192 2_1:+55506783 Msa0213020:CDS
CCTTGATACGGCACGTGAAA+AGG 0.446181 2_1:+55507307 Msa0213020:CDS
GTCTGTTACACTTGCTCCAC+GGG 0.446955 2_1:-55505911 None:intergenic
CTTGTTAGAGAGTATAGCTT+AGG 0.446991 2_1:+55511435 Msa0213020:three_prime_UTR
TCAAATACATCACCAGCAAC+TGG 0.448839 2_1:-55507272 None:intergenic
ATGAGAATGGTTCCTATCTT+GGG 0.449649 2_1:+55511058 Msa0213020:three_prime_UTR
CAAACCTGTACGGGTATAGA+AGG 0.451890 2_1:-55507025 None:intergenic
CGGTACGACTTCAGGCTGCC+AGG 0.452555 2_1:+55504862 Msa0213020:CDS
TATTTGGCGTAAAGGGGATT+CGG 0.453971 2_1:+55504299 Msa0213020:CDS
GGTTAATAAACCGGCAAGAC+CGG 0.454679 2_1:+55504203 Msa0213020:CDS
AACATGCATATAAGGATTCT+GGG 0.454868 2_1:-55503487 None:intergenic
CAACAGATAAGTGCTCTTCA+AGG 0.455429 2_1:+55506520 Msa0213020:intron
GGTGGTGATAGTGGTGGTGG+TGG 0.457499 2_1:+55503955 Msa0213020:CDS
TTGAAGGATTAGTGAAGAGA+AGG 0.460358 2_1:+55505105 Msa0213020:CDS
AGTTGCTGGTGATGTATTTG+AGG 0.460595 2_1:+55507274 Msa0213020:CDS
ATTCTAGAGGTCAGCGATGA+TGG 0.461639 2_1:+55504909 Msa0213020:CDS
CAGGTAGCTGCTTCTGAAGC+TGG 0.462878 2_1:+55505433 Msa0213020:intron
TTACAGGAACAAGTACCAAT+TGG 0.465183 2_1:+55509255 Msa0213020:intron
TGGCCCATGATAGTAATAAC+AGG 0.465283 2_1:-55505173 None:intergenic
GCATGCTTATCAATCAAGAT+AGG 0.466051 2_1:-55504585 None:intergenic
GTTATCTTGAAGGATAATAA+AGG 0.467520 2_1:+55504519 Msa0213020:CDS
ACTAATCCTTCAACTTTGAA+AGG 0.470154 2_1:-55505095 None:intergenic
GTGATGAAACAGAATTTCCT+TGG 0.473018 2_1:-55503894 None:intergenic
GTGCGGGCTTTATTCGATGA+TGG 0.473099 2_1:+55506977 Msa0213020:CDS
TGAAGAAGCCTCAGCATCAA+TGG 0.473740 2_1:+55510976 Msa0213020:CDS
GTTAGAAGACTATGATGATT+GGG 0.474473 2_1:+55510901 Msa0213020:CDS
TTTGTTGGTGAGAGAATGAA+TGG 0.475666 2_1:-55503439 None:intergenic
GCAAACTCTAGACAAAGATA+TGG 0.475840 2_1:+55505025 Msa0213020:CDS
TCCTTCAACTTTGAAAGGAT+CGG 0.476298 2_1:-55505090 None:intergenic
AACCAAGCATACCTCGTGCC+CGG 0.477324 2_1:-55505539 None:intergenic
GTTTCAGCTCTTCTGTAAAG+AGG 0.481425 2_1:+55511204 Msa0213020:three_prime_UTR
CTGCAGAAGCTAATGAAGAA+AGG 0.481900 2_1:-55507397 None:intergenic
ATAGCTCATGCCAAAGCAGC+AGG 0.482179 2_1:+55505991 Msa0213020:CDS
GGTGGTGGTGATAGTGGTGG+TGG 0.483112 2_1:+55503952 Msa0213020:CDS
GGTGGCGGCGGGGCTATCGA+AGG 0.484505 2_1:-55504477 None:intergenic
TATTCTTGATTCTTTGAGAC+GGG 0.488302 2_1:+55509407 Msa0213020:CDS
TTCGGTTGCGACGGTGAAGA+AGG 0.488465 2_1:+55504317 Msa0213020:CDS
CTACTCTTAACACTAGGCTT+AGG 0.490852 2_1:-55504354 None:intergenic
GGATCATATACGGAAGACTA+AGG 0.492543 2_1:+55505324 Msa0213020:CDS
CTGAAGAGTATTTGGCGTAA+AGG 0.493223 2_1:+55504291 Msa0213020:CDS
TGATGCTGAGGCTTCTTCAA+GGG 0.495037 2_1:-55510972 None:intergenic
TTGAAATAGATAGATAAAGA+TGG 0.495190 2_1:+55506320 Msa0213020:intron
AGCATCAATGGCAGCTGCTG+TGG 0.496041 2_1:+55510988 Msa0213020:CDS
TAAGCATGCTTCAAAGAAAC+CGG 0.497245 2_1:+55504599 Msa0213020:CDS
TAACGGTTCGGTTAATAAAC+CGG 0.497355 2_1:+55504194 Msa0213020:CDS
CTGCAAGAAAGGGACGGAAA+TGG 0.497683 2_1:+55504820 Msa0213020:CDS
TAAACCTAAGGATGATAAAC+CGG 0.497805 2_1:+55504236 Msa0213020:CDS
GGTGAAAGAGATTGTTAAAG+AGG 0.498488 2_1:+55509428 Msa0213020:CDS
CTTTACAGGAGCAGCATCCC+TGG 0.499114 2_1:-55504880 None:intergenic
GTTCTAGCTCCTACGAAACC+AGG 0.499194 2_1:+55504648 Msa0213020:CDS
AGTTCCTGTCTTTAATTCAA+AGG 0.499783 2_1:+55503531 Msa0213020:five_prime_UTR
AAATATAAACCTGAACCATC+GGG 0.500851 2_1:-55506415 None:intergenic
AATAAAGGTGGTGGTGATAG+TGG 0.500874 2_1:+55503946 Msa0213020:CDS
GAAATATAAACCTGAACCAT+CGG 0.501680 2_1:-55506416 None:intergenic
TGAAGGATTAGTGAAGAGAA+GGG 0.501903 2_1:+55505106 Msa0213020:CDS
GTATTCTTGATTCTTTGAGA+CGG 0.503904 2_1:+55509406 Msa0213020:CDS
TGCAGAAGCTAATGAAGAAA+GGG 0.504131 2_1:-55507396 None:intergenic
CACAGTCATTGAGGCAGGCA+TGG 0.504250 2_1:+55506739 Msa0213020:CDS
AACAGGTGGCGGTGGCGGCG+GGG 0.504472 2_1:-55504487 None:intergenic
TCCCTCTGTAACCATACATC+CGG 0.506642 2_1:-55509325 None:intergenic
GGAAGAAAGGTGCTTCGTCT+GGG 0.506984 2_1:+55504709 Msa0213020:CDS
CCAAGGGAGTTAAGCCAGAT+GGG 0.507628 2_1:+55505000 Msa0213020:CDS
CAGGGATGCTGCTCCTGTAA+AGG 0.508351 2_1:+55504881 Msa0213020:CDS
AAAGATGATTACCGGAAGAA+AGG 0.508617 2_1:+55504696 Msa0213020:CDS
AGCCGTCAAACAAGCCCTGC+AGG 0.509046 2_1:+55508567 Msa0213020:CDS
TTTCAGCTCTTCTGTAAAGA+GGG 0.511693 2_1:+55511205 Msa0213020:three_prime_UTR
TGCACAATAAATGTGGCAAA+TGG 0.512570 2_1:-55506776 None:intergenic
GACTATGATGATTGGGAAGA+GGG 0.512870 2_1:+55510908 Msa0213020:CDS
ATCAATGGCAGCTGCTGTGG+AGG 0.515967 2_1:+55510991 Msa0213020:CDS
TGTTTCTGTAATGAATTCAC+CGG 0.516931 2_1:-55504255 None:intergenic
ATTGTTGTGGCTGCTGATGA+TGG 0.517864 2_1:+55505943 Msa0213020:CDS
TACAATTCTACAACAAGCAA+TGG 0.517933 2_1:-55511164 None:intergenic
AGGAATGGTGAGGGTGATGA+TGG 0.519521 2_1:+55504078 Msa0213020:CDS
GCAGAATGGGTCACTTAGAA+GGG 0.520391 2_1:+55506796 Msa0213020:CDS
TACACCTTCTATACCCGTAC+AGG 0.520649 2_1:+55507021 Msa0213020:CDS
TTGCTTTGCTTGCAGCCGCA+AGG 0.520791 2_1:-55508663 None:intergenic
AAGGGCACAGTCATTGAGGC+AGG 0.521886 2_1:+55506734 Msa0213020:CDS
AGTTCCGAAGTATCCTCGTC+AGG 0.522391 2_1:-55504777 None:intergenic
TCATTATTGGACTTCAACAC+AGG 0.524124 2_1:-55504015 None:intergenic
GGTTGTTGAATCCCTTGATA+CGG 0.526485 2_1:+55507295 Msa0213020:CDS
CCTCCTGTTATTACTATCAT+GGG 0.527595 2_1:+55505170 Msa0213020:CDS
TACAATTTGGCTATTACTGA+AGG 0.527715 2_1:+55504954 Msa0213020:CDS
GGTACCTTTGAATTAAAGAC+AGG 0.528087 2_1:-55503535 None:intergenic
ACCAAGCATACCTCGTGCCC+GGG 0.530289 2_1:-55505538 None:intergenic
GGATTTAATGTCAAAGCACC+AGG 0.530366 2_1:+55508694 Msa0213020:CDS
TTCAACACAGGCTTAGGAGG+AGG 0.530482 2_1:-55504003 None:intergenic
GCTTGTGAACAGGTAAATGC+TGG 0.530775 2_1:+55510860 Msa0213020:intron
GCCTGTCTTTGAGTTTGTCG+AGG 0.532400 2_1:-55505148 None:intergenic
TATCAATCGAAAATACCATA+AGG 0.534640 2_1:+55503329 Msa0213020:five_prime_UTR
GCAGGCATGGATAAATCAAA+AGG 0.535690 2_1:+55506752 Msa0213020:CDS
TTCACCGGTTTATCATCCTT+AGG 0.535786 2_1:-55504240 None:intergenic
ACCTCGACAAACTCAAAGAC+AGG 0.536064 2_1:+55505147 Msa0213020:CDS
AGAACCGCTCGAGCAATCGC+AGG 0.536393 2_1:-55504630 None:intergenic
ATCTTGTGGTAGCACCTGCA+GGG 0.536828 2_1:-55508581 None:intergenic
CCTTCAAAATAATATTCAGT+TGG 0.538227 2_1:-55507454 None:intergenic
TGGTTTGATGCCAGAAGACT+GGG 0.538351 2_1:+55506382 Msa0213020:CDS
GACTTCAACACAGGCTTAGG+AGG 0.538372 2_1:-55504006 None:intergenic
TGTTAAGTCTAAAGAAAGGA+AGG 0.538682 2_1:+55504560 Msa0213020:CDS
AATTGGCTCAGCAGAAATAC+GGG 0.541782 2_1:+55509272 Msa0213020:CDS
GAATTCATTACAGAAACATA+AGG 0.543232 2_1:+55504260 Msa0213020:CDS
GTTGGAGAATTCTAAGTTAG+GGG 0.543353 2_1:+55504161 Msa0213020:CDS
TTACAAGTATTTCTAGGTCA+AGG 0.543807 2_1:-55511246 None:intergenic
TCCAAGGGAGTTAAGCCAGA+TGG 0.546916 2_1:+55504999 Msa0213020:CDS
GCAGCTGCTGTGGAGGGAGT+AGG 0.547089 2_1:+55510998 Msa0213020:CDS
GGGTTCGTCGAGGAATGGTG+AGG 0.548638 2_1:+55504068 Msa0213020:CDS
TGGGAATTTACAAACCTGTA+CGG 0.550196 2_1:-55507035 None:intergenic
AGCAGCTGCCATTGATGCTG+AGG 0.551575 2_1:-55510984 None:intergenic
AGACTATGATGATTGGGAAG+AGG 0.553169 2_1:+55510907 Msa0213020:CDS
GGGAATTTACAAACCTGTAC+GGG 0.554365 2_1:-55507034 None:intergenic
TGAGGTCTCGAAAGAGGCTG+AGG 0.554586 2_1:-55504435 None:intergenic
AACTGTTATGCTTGTTGCCG+AGG 0.555218 2_1:+55506567 Msa0213020:CDS
ACAGAGGGAAAGGTTACAAA+AGG 0.555516 2_1:+55509339 Msa0213020:CDS
ATTCCCGGCACTGCAAGAAA+GGG 0.555548 2_1:+55504810 Msa0213020:CDS
AAGACGAATGGTGGTGAACA+AGG 0.556420 2_1:+55504746 Msa0213020:CDS
AGCTATACTCTCTAACAAGA+AGG 0.557042 2_1:-55511431 None:intergenic
CTAGATTGTAACATCGGTTG+AGG 0.557546 2_1:-55504453 None:intergenic
TGACCCTGCGATTGCTCGAG+CGG 0.557585 2_1:+55504626 Msa0213020:CDS
TGTTAAGAGTAGTGAAGTGG+GGG 0.558037 2_1:+55504365 Msa0213020:CDS
GGAGCCTTCCCTGGTTTCGT+AGG 0.558349 2_1:-55504657 None:intergenic
GCAATCGCAGGGTCAACTGC+CGG 0.561387 2_1:-55504618 None:intergenic
GAGCGTATTTCAGCAAAGGC+AGG 0.562038 2_1:+55507359 Msa0213020:CDS
ATATTAGTTGGTAACGTGCA+AGG 0.562361 2_1:+55503688 Msa0213020:CDS
TTTCCTTGTCTTATATGTGG+TGG 0.562928 2_1:-55511271 None:intergenic
ATCGGTTGAGGTCTCGAAAG+AGG 0.563267 2_1:-55504441 None:intergenic
ATTTCAGCAAAGGCAGGAGA+TGG 0.563618 2_1:+55507365 Msa0213020:CDS
AGAATTGGAATGACCCAGAA+AGG 0.566340 2_1:-55503585 None:intergenic
TGATGATGTACGAAAAGCAA+TGG 0.568319 2_1:+55508786 Msa0213020:CDS
AAAGGTGCTTCGTCTGGGGA+AGG 0.569309 2_1:+55504714 Msa0213020:CDS
TCTTTATACCTTCCTTGGGG+AGG 0.571038 2_1:-55504678 None:intergenic
CCTCGGCTCTCTGTACTCCA+AGG 0.571056 2_1:+55504983 Msa0213020:CDS
GGATCGAGTTCGGGTTTAGG+GGG 0.573429 2_1:+55504048 Msa0213020:CDS
AGGATCGAGTTCGGGTTTAG+GGG 0.573846 2_1:+55504047 Msa0213020:CDS
TTGAAGGATAATAAAGGTCA+AGG 0.574157 2_1:+55504525 Msa0213020:CDS
AACAGATAAGTGCTCTTCAA+GGG 0.576526 2_1:+55506521 Msa0213020:intron
TGAAGCTGGTGGGATCACAC+AGG 0.577134 2_1:+55505447 Msa0213020:CDS
GGAGATATTGTAGTTTGTGG+AGG 0.577462 2_1:+55506818 Msa0213020:CDS
AGACATTTGTATTATTGTTG+TGG 0.579082 2_1:+55505930 Msa0213020:CDS
ATGTATGGTTACAGAGGGAA+AGG 0.579219 2_1:+55509329 Msa0213020:CDS
GGGTGAGAGAAGTAACGGTT+CGG 0.579332 2_1:+55504182 Msa0213020:CDS
GATGATAGTAATAATAAAGG+TGG 0.580656 2_1:+55503934 Msa0213020:CDS
GGTTATGAATGATAAACCTA+AGG 0.581018 2_1:+55504224 Msa0213020:CDS
TAGCTGCTTCTGAAGCTGGT+GGG 0.582078 2_1:+55505437 Msa0213020:CDS
GGTACGACTTCAGGCTGCCA+GGG 0.582481 2_1:+55504863 Msa0213020:CDS
CACCTGTTAAGTCTAAAGAA+AGG 0.582674 2_1:+55504556 Msa0213020:CDS
ATATGACATCATGATGAGAA+TGG 0.583387 2_1:+55511045 Msa0213020:three_prime_UTR
TAGTGTTAAGAGTAGTGAAG+TGG 0.583748 2_1:+55504362 Msa0213020:CDS
CGGGCTTTATTCGATGATGG+TGG 0.584269 2_1:+55506980 Msa0213020:CDS
TATGATCCTGTAGGCATTTG+GGG 0.584664 2_1:+55505879 Msa0213020:intron
GCTGTATTCAGCAGTGGTAG+CGG 0.585735 2_1:+55509294 Msa0213020:CDS
TGGTATGCTGGTGGAGGAGT+TGG 0.586188 2_1:+55504929 Msa0213020:CDS
GGTCAGCGATGATGGTATGC+TGG 0.587134 2_1:+55504917 Msa0213020:CDS
AAGAGTAGAAGTGATTGTTG+TGG 0.587304 2_1:-55503384 None:intergenic
TAATCCTGATAGAAGTGCGA+AGG 0.587792 2_1:+55506715 Msa0213020:CDS
TTGGAGAATTCTAAGTTAGG+GGG 0.588882 2_1:+55504162 Msa0213020:CDS
CGAATGGTGGTGAACAAGGA+TGG 0.589263 2_1:+55504750 Msa0213020:CDS
CATTATAATTGCTATAAACA+AGG 0.590037 2_1:+55506020 Msa0213020:CDS
TGGGATCACACAGGGAATTG+GGG 0.590345 2_1:+55505456 Msa0213020:CDS
GATGTACGAAAAGCAATGGA+AGG 0.591457 2_1:+55508790 Msa0213020:CDS
ATCATGGGCCATGTTGATCA+CGG 0.592675 2_1:+55505185 Msa0213020:CDS
GGAAGGCTCCTCCCCAAGGA+AGG 0.592914 2_1:+55504670 Msa0213020:CDS
GGTGCTTCGTCTGGGGAAGG+AGG 0.594503 2_1:+55504717 Msa0213020:CDS
TCAATGGCAGCTGCTGTGGA+GGG 0.595563 2_1:+55510992 Msa0213020:CDS
AGCAAAGGCAGGAGATGGCA+AGG 0.595727 2_1:+55507370 Msa0213020:CDS
GTAAATGCTGGTCTTGAGTG+TGG 0.596500 2_1:+55510872 Msa0213020:CDS
TGGTGTCGATGAGAGAAGTA+AGG 0.597153 2_1:+55504098 Msa0213020:CDS
AAGAAAGCTCTTGCATAACT+CGG 0.598226 2_1:-55506355 None:intergenic
TGCGAAGGGCACAGTCATTG+AGG 0.599643 2_1:+55506730 Msa0213020:CDS
GAAGAGTATTTGGCGTAAAG+GGG 0.601482 2_1:+55504293 Msa0213020:CDS
CCAGGGAAGGCTCCTCCCCA+AGG 0.601951 2_1:+55504666 Msa0213020:CDS
TATTCCTGACGAGGATACTT+CGG 0.602324 2_1:+55504773 Msa0213020:CDS
CTCGGCTCTCTGTACTCCAA+GGG 0.603085 2_1:+55504984 Msa0213020:CDS
AGTGTTAAGAGTAGTGAAGT+GGG 0.603155 2_1:+55504363 Msa0213020:CDS
TGTCTGTTACACTTGCTCCA+CGG 0.603457 2_1:-55505912 None:intergenic
TTTGGGGCAATGAGAGCCCG+TGG 0.604972 2_1:+55505895 Msa0213020:CDS
CATCTCGCAATGACATAACA+CGG 0.604986 2_1:-55507337 None:intergenic
CTTTCTTTAGACTTAACAGG+TGG 0.607078 2_1:-55504555 None:intergenic
ACTTCACTACTCTTAACACT+AGG 0.607135 2_1:-55504360 None:intergenic
TCTATATAATCTTATCTCAA+CGG 0.607790 2_1:-55508746 None:intergenic
ATTACTGAAGGTGAAATCCT+CGG 0.607918 2_1:+55504966 Msa0213020:CDS
TCTCTAACAAGAAGGAAGCA+TGG 0.607942 2_1:-55511423 None:intergenic
CCCATTCTGCACAATAAATG+TGG 0.608294 2_1:-55506783 None:intergenic
CACAAGCGATGTTGACCTTG+CGG 0.608514 2_1:+55508648 Msa0213020:CDS
AGATGAGCGTATTTCAGCAA+AGG 0.608854 2_1:+55507355 Msa0213020:CDS
GATAGTAATAATAAAGGTGG+TGG 0.609409 2_1:+55503937 Msa0213020:CDS
CGATGATGGTATGCTGGTGG+AGG 0.609595 2_1:+55504923 Msa0213020:CDS
GCCGGATGTATGGTTACAGA+GGG 0.610179 2_1:+55509324 Msa0213020:CDS
GGTGATTGAATCACTTGGCG+AGG 0.612242 2_1:+55504119 Msa0213020:CDS
AGCTCCTACGAAACCAGGGA+AGG 0.614926 2_1:+55504653 Msa0213020:CDS
GTAGCTGCTTCTGAAGCTGG+TGG 0.615693 2_1:+55505436 Msa0213020:CDS
GGCATTCGAGTCATGCGGAA+GGG 0.617401 2_1:+55509366 Msa0213020:CDS
GGAAAGGTTACAAAAGGCTG+TGG 0.617595 2_1:+55509345 Msa0213020:CDS
GGTTCGTCGAGGAATGGTGA+GGG 0.618259 2_1:+55504069 Msa0213020:CDS
TCTCGACACTCCCGGGCACG+AGG 0.618697 2_1:+55505528 Msa0213020:CDS
TGGCATTCGAGTCATGCGGA+AGG 0.619416 2_1:+55509365 Msa0213020:CDS
GACGGTGAAGAAGGTTGTGA+AGG 0.621206 2_1:+55504326 Msa0213020:CDS
TGTAAAGGTTGAAATTCTAG+AGG 0.622266 2_1:+55504896 Msa0213020:CDS
AGGACCAAGAAGACGAATGG+TGG 0.622491 2_1:+55504737 Msa0213020:CDS
AGGAGGACCAAGAAGACGAA+TGG 0.623267 2_1:+55504734 Msa0213020:CDS
ATGTACGAAAAGCAATGGAA+GGG 0.623300 2_1:+55508791 Msa0213020:CDS
TAAAGGGGATTCGGTTGCGA+CGG 0.623643 2_1:+55504308 Msa0213020:CDS
AGTAAGGTGATTGAATCACT+TGG 0.625258 2_1:+55504114 Msa0213020:CDS
TTCAGTGTGACATTATCTTG+TGG 0.626050 2_1:-55508595 None:intergenic
CAAGGATGGTATTCCTGACG+AGG 0.626463 2_1:+55504764 Msa0213020:CDS
GTTAAGTCTAAAGAAAGGAA+GGG 0.626527 2_1:+55504561 Msa0213020:CDS
GAAGAAAGGTGCTTCGTCTG+GGG 0.627724 2_1:+55504710 Msa0213020:CDS
TTGCCTTGCCGTGATCAACA+TGG 0.628156 2_1:-55505193 None:intergenic
GAAGCTGGTGGGATCACACA+GGG 0.632719 2_1:+55505448 Msa0213020:CDS
GAAGGCCTAGATTGTAACAT+CGG 0.634932 2_1:-55504459 None:intergenic
TCATCTTTATACCTTCCTTG+GGG 0.638433 2_1:-55504681 None:intergenic
GAACCGCTCGAGCAATCGCA+GGG 0.642773 2_1:-55504629 None:intergenic
CAGCGATGATGGTATGCTGG+TGG 0.645316 2_1:+55504920 Msa0213020:CDS
AATCCTGATAGAAGTGCGAA+GGG 0.648109 2_1:+55506716 Msa0213020:CDS
TTCTAGCTCCTACGAAACCA+GGG 0.648351 2_1:+55504649 Msa0213020:CDS
ATCTCGCAATGACATAACAC+GGG 0.648838 2_1:-55507336 None:intergenic
CCGGCACTGCAAGAAAGGGA+CGG 0.649648 2_1:+55504814 Msa0213020:CDS
CAGAATGGGTCACTTAGAAG+GGG 0.650965 2_1:+55506797 Msa0213020:CDS
GGGCCATGTTGATCACGGCA+AGG 0.652682 2_1:+55505190 Msa0213020:CDS
GTGTTAAGAGTAGTGAAGTG+GGG 0.657242 2_1:+55504364 Msa0213020:CDS
ATACGGGCTGTATTCAGCAG+TGG 0.664157 2_1:+55509288 Msa0213020:CDS
ATGGAGTAAAGCAAGTCGCA+AGG 0.668970 2_1:+55504839 Msa0213020:CDS
CTGGGGTGGTGACATCCCGA+TGG 0.671240 2_1:+55506400 Msa0213020:CDS
TGCCGGATGTATGGTTACAG+AGG 0.672920 2_1:+55509323 Msa0213020:CDS
ACACCACCACATATAAGACA+AGG 0.675809 2_1:+55511268 Msa0213020:three_prime_UTR
AGGGCTCCTAGATTCTGTTG+AGG 0.683808 2_1:+55508810 Msa0213020:CDS
CAAGGGAGTTAAGCCAGATG+GGG 0.684529 2_1:+55505001 Msa0213020:CDS
AAAGGTGGTGGTGATAGTGG+TGG 0.689923 2_1:+55503949 Msa0213020:CDS
CCTTGGAGTACAGAGAGCCG+AGG 0.711818 2_1:-55504983 None:intergenic
CCCATGATAGTAATAACAGG+AGG 0.712801 2_1:-55505170 None:intergenic
GAGTAAAGCAAGTCGCAAGG+CGG 0.741811 2_1:+55504842 Msa0213020:CDS
GCTGTGGCATTCGAGTCATG+CGG 0.741960 2_1:+55509361 Msa0213020:CDS
TTGATGCCAGAAGACTGGGG+TGG 0.759326 2_1:+55506386 Msa0213020:CDS
GGTTTGATGCCAGAAGACTG+GGG 0.809538 2_1:+55506383 Msa0213020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATGATAAATTTAGTAT+TGG + chr2_1:55507672-55507691 Msa0213020:intron 10.0%
!! TTAATGATAAATTTAGTATT+GGG + chr2_1:55507673-55507692 Msa0213020:intron 10.0%
!!! AAAACAAAATATTTTTTACA+AGG - chr2_1:55507953-55507972 None:intergenic 10.0%
!! AATGATGATAGTAATAATAA+AGG + chr2_1:55503931-55503950 Msa0213020:CDS 15.0%
!! TATTAATAAAGTAACATCAA+TGG - chr2_1:55505830-55505849 None:intergenic 15.0%
!! ATATAATAGATATCAGATAT+AGG - chr2_1:55505860-55505879 None:intergenic 15.0%
!! TTGTTTATAGCAATTATAAT+GGG - chr2_1:55506021-55506040 None:intergenic 15.0%
!!! GTTTATATTTCTTATTTTCT+TGG + chr2_1:55506428-55506447 Msa0213020:intron 15.0%
!! GAATTAAATTTCATTATTCT+TGG + chr2_1:55508523-55508542 Msa0213020:intron 15.0%
!! AATGATTAAAAGAAAGAAAA+TGG + chr2_1:55508980-55508999 Msa0213020:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_1:55509014-55509033 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_1:55509013-55509032 Msa0213020:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr2_1:55509037-55509056 Msa0213020:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr2_1:55509140-55509159 Msa0213020:intron 15.0%
!!! ATCAGAAATAAGTATTTTTA+AGG + chr2_1:55509663-55509682 Msa0213020:intron 15.0%
!!! ATGTAAATTTTATAAATGGA+TGG - chr2_1:55510039-55510058 None:intergenic 15.0%
!!! GACAATGTAAATTTTATAAA+TGG - chr2_1:55510043-55510062 None:intergenic 15.0%
!! TTACTAAAAAAGAAAAGAAA+AGG + chr2_1:55510535-55510554 Msa0213020:intron 15.0%
!! TACTAAAAAAGAAAAGAAAA+GGG + chr2_1:55510536-55510555 Msa0213020:intron 15.0%
!! AACAAAAAATATTATGATGT+GGG - chr2_1:55511101-55511120 None:intergenic 15.0%
!!! ATCATAATATTTTTTGTTGA+AGG + chr2_1:55511103-55511122 Msa0213020:three_prime_UTR 15.0%
!!! GCTTGTTTTTTTTTTTTTGT+TGG - chr2_1:55503457-55503476 None:intergenic 20.0%
!! TGATGAAAATGAAGAATTAA+TGG - chr2_1:55503559-55503578 None:intergenic 20.0%
!! CTTAATATGCTTATATTAGT+TGG + chr2_1:55503676-55503695 Msa0213020:exon 20.0%
!! TATATGGTGAATTATGTTAT+TGG + chr2_1:55505347-55505366 Msa0213020:intron 20.0%
!! CTTGTTTATAGCAATTATAA+TGG - chr2_1:55506022-55506041 None:intergenic 20.0%
!! CATTATAATTGCTATAAACA+AGG + chr2_1:55506020-55506039 Msa0213020:CDS 20.0%
!!! AATCATAAGCATTGAAAATT+GGG - chr2_1:55506068-55506087 None:intergenic 20.0%
!!! TTCAAATTTTGTTGTGTTAT+AGG + chr2_1:55506110-55506129 Msa0213020:intron 20.0%
!!! TCAAATTTTGTTGTGTTATA+GGG + chr2_1:55506111-55506130 Msa0213020:intron 20.0%
!!! TTCAAATTTTGTTGTGTTAT+AGG + chr2_1:55506110-55506129 Msa0213020:intron 20.0%
!!! TCAAATTTTGTTGTGTTATA+GGG + chr2_1:55506111-55506130 Msa0213020:intron 20.0%
!! TTGAAATAGATAGATAAAGA+TGG + chr2_1:55506320-55506339 Msa0213020:intron 20.0%
!! GAAGTAATAAAAGATGTTAA+TGG - chr2_1:55506951-55506970 None:intergenic 20.0%
!!! CAATAAGAAAATTTTGATTG+AGG - chr2_1:55507210-55507229 None:intergenic 20.0%
!! AATAACTTGATAAGCTTAAA+AGG - chr2_1:55507705-55507724 None:intergenic 20.0%
!!! TTTTAAGCTTATCAAGTTAT+TGG + chr2_1:55507704-55507723 Msa0213020:intron 20.0%
!!! TAGTTGATATTAGAGAATAT+AGG + chr2_1:55507878-55507897 Msa0213020:intron 20.0%
!!! CTTATAAAATTTGTTCATCT+TGG + chr2_1:55508030-55508049 Msa0213020:intron 20.0%
!! CAAAAAATTTGTATCTTGTA+GGG + chr2_1:55508259-55508278 Msa0213020:intron 20.0%
!! TCTATATAATCTTATCTCAA+CGG - chr2_1:55508749-55508768 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_1:55509023-55509042 None:intergenic 20.0%
!! TTTAAAAGTAATACTTTGGA+AGG + chr2_1:55509041-55509060 Msa0213020:intron 20.0%
!!! TTTAACTTAAAAGTTACTGA+TGG + chr2_1:55509204-55509223 Msa0213020:intron 20.0%
!!! TATTTTTAAGGTCATAGAAT+TGG + chr2_1:55509675-55509694 Msa0213020:intron 20.0%
!! TTTGAATAGTACTTATAAGA+GGG - chr2_1:55509945-55509964 None:intergenic 20.0%
!! TCTCACATTGAAAAATAATA+CGG - chr2_1:55509968-55509987 None:intergenic 20.0%
!! CAACAAAAAATATTATGATG+TGG - chr2_1:55511102-55511121 None:intergenic 20.0%
!!! ATAATATTTTTTGTTGAAGG+TGG + chr2_1:55511106-55511125 Msa0213020:three_prime_UTR 20.0%
!!! TAATATTTTTTGTTGAAGGT+GGG + chr2_1:55511107-55511126 Msa0213020:three_prime_UTR 20.0%
! TATCAATCGAAAATACCATA+AGG + chr2_1:55503329-55503348 Msa0213020:five_prime_UTR 25.0%
!!! ATATGAAAAATGGTTTGGTT+TGG - chr2_1:55503364-55503383 None:intergenic 25.0%
! ATTGTTGTGGATATGAAAAA+TGG - chr2_1:55503374-55503393 None:intergenic 25.0%
! ATTGTATAGGGAAAAAAAGA+TGG + chr2_1:55503812-55503831 Msa0213020:CDS 25.0%
! GATGATAGTAATAATAAAGG+TGG + chr2_1:55503934-55503953 Msa0213020:CDS 25.0%
! TTAGGTTTATCATTCATAAC+CGG - chr2_1:55504225-55504244 None:intergenic 25.0%
! GAATTCATTACAGAAACATA+AGG + chr2_1:55504260-55504279 Msa0213020:CDS 25.0%
! TTATTATCCTTCAAGATAAC+AGG - chr2_1:55504519-55504538 None:intergenic 25.0%
! GTTATCTTGAAGGATAATAA+AGG + chr2_1:55504519-55504538 Msa0213020:CDS 25.0%
!! AACAGTTTTGCATATCTATA+AGG - chr2_1:55505599-55505618 None:intergenic 25.0%
! TCTATTATATATGATCCTGT+AGG + chr2_1:55505870-55505889 Msa0213020:intron 25.0%
! AGACATTTGTATTATTGTTG+TGG + chr2_1:55505930-55505949 Msa0213020:CDS 25.0%
! ATAATTGCTATAAACAAGGT+AGG + chr2_1:55506024-55506043 Msa0213020:intron 25.0%
!!! ATCATAAGCATTGAAAATTG+GGG - chr2_1:55506067-55506086 None:intergenic 25.0%
!!! GAATCATAAGCATTGAAAAT+TGG - chr2_1:55506069-55506088 None:intergenic 25.0%
!!! TCATGCTCATATTTTGTTTT+TGG + chr2_1:55506451-55506470 Msa0213020:intron 25.0%
!!! TTTTTGGTTCTGTAACTTTT+AGG + chr2_1:55506467-55506486 Msa0213020:intron 25.0%
!!! TGTTTAATGATCTTAGCTTT+TGG + chr2_1:55506885-55506904 Msa0213020:intron 25.0%
! CCTTCAAAATAATATTCAGT+TGG - chr2_1:55507457-55507476 None:intergenic 25.0%
!!! CCAACTGAATATTATTTTGA+AGG + chr2_1:55507454-55507473 Msa0213020:CDS 25.0%
!! ATAAATTTAGTATTGGGAAG+AGG + chr2_1:55507679-55507698 Msa0213020:intron 25.0%
!!! ATGCTCTTTTTTCTTTCTTT+TGG + chr2_1:55507987-55508006 Msa0213020:intron 25.0%
! CTTATGTACTTAGTATTTGA+GGG + chr2_1:55508091-55508110 Msa0213020:intron 25.0%
!! CAACGTAAAAACATTTTTGT+GGG + chr2_1:55508153-55508172 Msa0213020:intron 25.0%
! GCAAAAAATTTGTATCTTGT+AGG + chr2_1:55508258-55508277 Msa0213020:intron 25.0%
! ACATACTACATTTATCAAGT+AGG + chr2_1:55508350-55508369 Msa0213020:intron 25.0%
!!! TCTTTTAATTTGTAAACCCT+TGG + chr2_1:55508845-55508864 Msa0213020:intron 25.0%
! AGAAAAGGTTATTATTGCAT+TGG + chr2_1:55509100-55509119 Msa0213020:intron 25.0%
!! ATTTTTACTGTTCATGTAAG+TGG + chr2_1:55509479-55509498 Msa0213020:intron 25.0%
! GTTTGAATAGTACTTATAAG+AGG - chr2_1:55509946-55509965 None:intergenic 25.0%
! AAATAATCCTTCAAATGACT+GGG - chr2_1:55510081-55510100 None:intergenic 25.0%
! ATGATTGAAAATGGTAAAGT+CGG - chr2_1:55510682-55510701 None:intergenic 25.0%
!!! AATATTTTTTGTTGAAGGTG+GGG + chr2_1:55511108-55511127 Msa0213020:three_prime_UTR 25.0%
!! AAAAATGGTTTGGTTTGGTT+GGG - chr2_1:55503359-55503378 None:intergenic 30.0%
TGTGGATATGAAAAATGGTT+TGG - chr2_1:55503369-55503388 None:intergenic 30.0%
AACATGCATATAAGGATTCT+GGG - chr2_1:55503490-55503509 None:intergenic 30.0%
TGAAGTAGAACATGCATATA+AGG - chr2_1:55503498-55503517 None:intergenic 30.0%
AGTTCCTGTCTTTAATTCAA+AGG + chr2_1:55503531-55503550 Msa0213020:five_prime_UTR 30.0%
TTTCATCACAATTTCCTTTC+TGG + chr2_1:55503571-55503590 Msa0213020:five_prime_UTR 30.0%
TTCATCACAATTTCCTTTCT+GGG + chr2_1:55503572-55503591 Msa0213020:five_prime_UTR 30.0%
TCATTCCAATTCTCAACTTT+GGG + chr2_1:55503595-55503614 Msa0213020:five_prime_UTR 30.0%
!! TTGTTGTGTTTTTGTGTTGT+TGG + chr2_1:55503647-55503666 Msa0213020:five_prime_UTR 30.0%
!! TGTTGTGTTTTTGTGTTGTT+GGG + chr2_1:55503648-55503667 Msa0213020:five_prime_UTR 30.0%
GAAGAACTACCTAAACTTAT+TGG - chr2_1:55503739-55503758 None:intergenic 30.0%
!! TTTCTCTTTCTAGTTCTAGA+AGG + chr2_1:55503788-55503807 Msa0213020:CDS 30.0%
!! AGTTCTAGAAGGAATTGTAT+AGG + chr2_1:55503799-55503818 Msa0213020:CDS 30.0%
!! GTTCTAGAAGGAATTGTATA+GGG + chr2_1:55503800-55503819 Msa0213020:CDS 30.0%
GATAGTAATAATAAAGGTGG+TGG + chr2_1:55503937-55503956 Msa0213020:CDS 30.0%
! TCCAATAATGACTCGATTTT+AGG + chr2_1:55504027-55504046 Msa0213020:CDS 30.0%
TCCTAAAATCGAGTCATTAT+TGG - chr2_1:55504031-55504050 None:intergenic 30.0%
AAGTTGGAGAATTCTAAGTT+AGG + chr2_1:55504159-55504178 Msa0213020:CDS 30.0%
AGTTGGAGAATTCTAAGTTA+GGG + chr2_1:55504160-55504179 Msa0213020:CDS 30.0%
GGTTATGAATGATAAACCTA+AGG + chr2_1:55504224-55504243 Msa0213020:CDS 30.0%
TAAACCTAAGGATGATAAAC+CGG + chr2_1:55504236-55504255 Msa0213020:CDS 30.0%
! TGTTTCTGTAATGAATTCAC+CGG - chr2_1:55504258-55504277 None:intergenic 30.0%
! AAGATAACAGGCTTTTTAAC+AGG - chr2_1:55504507-55504526 None:intergenic 30.0%
TAAAAAGCCTGTTATCTTGA+AGG + chr2_1:55504509-55504528 Msa0213020:CDS 30.0%
TTGAAGGATAATAAAGGTCA+AGG + chr2_1:55504525-55504544 Msa0213020:CDS 30.0%
TTCCTTTCTTTAGACTTAAC+AGG - chr2_1:55504561-55504580 None:intergenic 30.0%
TGTTAAGTCTAAAGAAAGGA+AGG + chr2_1:55504560-55504579 Msa0213020:CDS 30.0%
GTTAAGTCTAAAGAAAGGAA+GGG + chr2_1:55504561-55504580 Msa0213020:CDS 30.0%
ATCATCTTTATACCTTCCTT+GGG - chr2_1:55504685-55504704 None:intergenic 30.0%
AATCATCTTTATACCTTCCT+TGG - chr2_1:55504686-55504705 None:intergenic 30.0%
! GAAGGTATAAAGATGATTAC+CGG + chr2_1:55504688-55504707 Msa0213020:CDS 30.0%
! TCTAGAATTTCAACCTTTAC+AGG - chr2_1:55504897-55504916 None:intergenic 30.0%
TGTAAAGGTTGAAATTCTAG+AGG + chr2_1:55504896-55504915 Msa0213020:CDS 30.0%
TACAATTTGGCTATTACTGA+AGG + chr2_1:55504954-55504973 Msa0213020:CDS 30.0%
ACTAATCCTTCAACTTTGAA+AGG - chr2_1:55505098-55505117 None:intergenic 30.0%
! CAACTCTTTTGGATCATATA+CGG + chr2_1:55505314-55505333 Msa0213020:CDS 30.0%
! GGTGAATTATGTTATTGGTT+AGG + chr2_1:55505352-55505371 Msa0213020:intron 30.0%
TTTCATTCATTGAATCCTGT+TGG + chr2_1:55505625-55505644 Msa0213020:intron 30.0%
TTCATTCATTGAATCCTGTT+GGG + chr2_1:55505626-55505645 Msa0213020:intron 30.0%
! TGACAACATTTTGTACTGAA+CGG + chr2_1:55506182-55506201 Msa0213020:intron 30.0%
TTTAAACTCCACTATGCTAT+AGG + chr2_1:55506230-55506249 Msa0213020:intron 30.0%
TTAAACTCCACTATGCTATA+GGG + chr2_1:55506231-55506250 Msa0213020:intron 30.0%
GACAACACTTATGATTTACT+TGG + chr2_1:55506258-55506277 Msa0213020:intron 30.0%
! ACTTATGATTTACTTGGTGA+TGG + chr2_1:55506264-55506283 Msa0213020:intron 30.0%
AAATATAAACCTGAACCATC+GGG - chr2_1:55506418-55506437 None:intergenic 30.0%
GAAATATAAACCTGAACCAT+CGG - chr2_1:55506419-55506438 None:intergenic 30.0%
!!! GAAGAATGTTGATGATCTTT+TGG + chr2_1:55506543-55506562 Msa0213020:CDS 30.0%
ACAACAGTAAAAATGTACCT+CGG - chr2_1:55506587-55506606 None:intergenic 30.0%
CAACTATACATGAAATGCTT+AGG - chr2_1:55506681-55506700 None:intergenic 30.0%
!! AAAGATGTTAATGGATTCAG+AGG - chr2_1:55506942-55506961 None:intergenic 30.0%
! CATCTTTTATTACTTCCTTC+AGG + chr2_1:55506955-55506974 Msa0213020:intron 30.0%
! AAGTAGTAACGTTTTATGCT+GGG - chr2_1:55507057-55507076 None:intergenic 30.0%
! AAAGTAGTAACGTTTTATGC+TGG - chr2_1:55507058-55507077 None:intergenic 30.0%
!!! TACTACTTTTTTGTTTCCCT+TGG + chr2_1:55507069-55507088 Msa0213020:intron 30.0%
!! TATTTTGAAGGTTGATCTTC+AGG + chr2_1:55507466-55507485 Msa0213020:CDS 30.0%
TGTAGAAATTCAAGTAACAG+TGG - chr2_1:55507506-55507525 None:intergenic 30.0%
TAAGAACCAAAAAATCAGCA+AGG - chr2_1:55508014-55508033 None:intergenic 30.0%
CCTCAAATACTAAGTACATA+AGG - chr2_1:55508093-55508112 None:intergenic 30.0%
CCTTATGTACTTAGTATTTG+AGG + chr2_1:55508090-55508109 Msa0213020:intron 30.0%
!! CCACAAAAATGTTTTTACGT+TGG - chr2_1:55508155-55508174 None:intergenic 30.0%
! CCAACGTAAAAACATTTTTG+TGG + chr2_1:55508152-55508171 Msa0213020:intron 30.0%
!! AGCAAAAAAGAGTATTCACA+AGG + chr2_1:55508201-55508220 Msa0213020:intron 30.0%
ATAAATGTAGTATGTGAGAG+GGG - chr2_1:55508345-55508364 None:intergenic 30.0%
GATAAATGTAGTATGTGAGA+GGG - chr2_1:55508346-55508365 None:intergenic 30.0%
TGATAAATGTAGTATGTGAG+AGG - chr2_1:55508347-55508366 None:intergenic 30.0%
!! TACTTTTTGCTATAAGCATG+TGG - chr2_1:55508379-55508398 None:intergenic 30.0%
TGACATTATCTCTACTGTAT+TGG + chr2_1:55508420-55508439 Msa0213020:intron 30.0%
ACTGTAGTTATTACTTCATC+TGG + chr2_1:55508501-55508520 Msa0213020:intron 30.0%
ATTATTCTTGGTCATGACTA+GGG + chr2_1:55508535-55508554 Msa0213020:intron 30.0%
! GCAAGCAAAGCAATTATTTT+TGG + chr2_1:55508673-55508692 Msa0213020:CDS 30.0%
ATATGCATAATGTATGCCAA+GGG - chr2_1:55508864-55508883 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr2_1:55508931-55508950 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr2_1:55508932-55508951 Msa0213020:intron 30.0%
AGGGTACAATTGAAAAGAAA+AGG + chr2_1:55509085-55509104 Msa0213020:intron 30.0%
! TCTTACTGCTATCTTTTTAC+AGG + chr2_1:55509239-55509258 Msa0213020:intron 30.0%
AAGGGAAAAATAGTTCATGT+TGG + chr2_1:55509384-55509403 Msa0213020:CDS 30.0%
! GTATTCTTGATTCTTTGAGA+CGG + chr2_1:55509406-55509425 Msa0213020:CDS 30.0%
!! TATTCTTGATTCTTTGAGAC+GGG + chr2_1:55509407-55509426 Msa0213020:CDS 30.0%
! TGTCCATTTTCATTTGTAGT+TGG + chr2_1:55509586-55509605 Msa0213020:intron 30.0%
TAGCCAACTACAAATGAAAA+TGG - chr2_1:55509592-55509611 None:intergenic 30.0%
TTGTAGTTGGCTATTATGAA+TGG + chr2_1:55509599-55509618 Msa0213020:intron 30.0%
TGTAGTTGGCTATTATGAAT+GGG + chr2_1:55509600-55509619 Msa0213020:intron 30.0%
TTAGTAAAGTCACTCGTTAT+CGG - chr2_1:55509837-55509856 None:intergenic 30.0%
! GGTCAATCTATATTCTAAGA+CGG - chr2_1:55509879-55509898 None:intergenic 30.0%
GAAATAATCCTTCAAATGAC+TGG - chr2_1:55510082-55510101 None:intergenic 30.0%
!! TGAAGGATTATTTCTACGTT+TGG + chr2_1:55510088-55510107 Msa0213020:intron 30.0%
CAGAGGATATTGTATATGTA+TGG - chr2_1:55510201-55510220 None:intergenic 30.0%
!!! TCTGTTTTAGTTTTTGGCTA+TGG + chr2_1:55510341-55510360 Msa0213020:intron 30.0%
!! TTAAGTTGTTTCTCCATACA+GGG - chr2_1:55510387-55510406 None:intergenic 30.0%
!! ATTAAGTTGTTTCTCCATAC+AGG - chr2_1:55510388-55510407 None:intergenic 30.0%
ATTCTATCCTAGAGAGTTTA+TGG + chr2_1:55510474-55510493 Msa0213020:intron 30.0%
CTTATTTCCATAAACTCTCT+AGG - chr2_1:55510484-55510503 None:intergenic 30.0%
AACCTCTTGTGTAAAAAACA+GGG - chr2_1:55510642-55510661 None:intergenic 30.0%
TGATTGAAAATGGTAAAGTC+GGG - chr2_1:55510681-55510700 None:intergenic 30.0%
TGTTGTCACATGATTGAAAA+TGG - chr2_1:55510691-55510710 None:intergenic 30.0%
AAAGACATCAATGTTTGTTC+AGG - chr2_1:55510839-55510858 None:intergenic 30.0%
GTTAGAAGACTATGATGATT+GGG + chr2_1:55510901-55510920 Msa0213020:CDS 30.0%
ATATGACATCATGATGAGAA+TGG + chr2_1:55511045-55511064 Msa0213020:three_prime_UTR 30.0%
TACAATTCTACAACAAGCAA+TGG - chr2_1:55511167-55511186 None:intergenic 30.0%
!! TTACAAGTATTTCTAGGTCA+AGG - chr2_1:55511249-55511268 None:intergenic 30.0%
TTCTTTCCTTGTCTTATATG+TGG - chr2_1:55511277-55511296 None:intergenic 30.0%
TGTATGATGCTCTTGATTAA+TGG + chr2_1:55511330-55511349 Msa0213020:three_prime_UTR 30.0%
!! GAAAAATGGTTTGGTTTGGT+TGG - chr2_1:55503360-55503379 None:intergenic 35.0%
AAGAGTAGAAGTGATTGTTG+TGG - chr2_1:55503387-55503406 None:intergenic 35.0%
! TTTGTTGGTGAGAGAATGAA+TGG - chr2_1:55503442-55503461 None:intergenic 35.0%
GAACATGCATATAAGGATTC+TGG - chr2_1:55503491-55503510 None:intergenic 35.0%
GGTACCTTTGAATTAAAGAC+AGG - chr2_1:55503538-55503557 None:intergenic 35.0%
GTCATTCCAATTCTCAACTT+TGG + chr2_1:55503594-55503613 Msa0213020:five_prime_UTR 35.0%
ACATACCCAAAGTTGAGAAT+TGG - chr2_1:55503603-55503622 None:intergenic 35.0%
TCTCAACTTTGGGTATGTTA+AGG + chr2_1:55503605-55503624 Msa0213020:five_prime_UTR 35.0%
!! ATATTAGTTGGTAACGTGCA+AGG + chr2_1:55503688-55503707 Msa0213020:CDS 35.0%
CTTGCTTCACCAATAAGTTT+AGG + chr2_1:55503727-55503746 Msa0213020:CDS 35.0%
GTGATGAAACAGAATTTCCT+TGG - chr2_1:55503897-55503916 None:intergenic 35.0%
TCATTATTGGACTTCAACAC+AGG - chr2_1:55504018-55504037 None:intergenic 35.0%
AGTAAGGTGATTGAATCACT+TGG + chr2_1:55504114-55504133 Msa0213020:CDS 35.0%
GTTGGAGAATTCTAAGTTAG+GGG + chr2_1:55504161-55504180 Msa0213020:CDS 35.0%
TTGGAGAATTCTAAGTTAGG+GGG + chr2_1:55504162-55504181 Msa0213020:CDS 35.0%
!! TAACGGTTCGGTTAATAAAC+CGG + chr2_1:55504194-55504213 Msa0213020:CDS 35.0%
!! TGAAGAGTATTTGGCGTAAA+GGG + chr2_1:55504292-55504311 Msa0213020:CDS 35.0%
ACTTCACTACTCTTAACACT+AGG - chr2_1:55504363-55504382 None:intergenic 35.0%
TAGTGTTAAGAGTAGTGAAG+TGG + chr2_1:55504362-55504381 Msa0213020:CDS 35.0%
AGTGTTAAGAGTAGTGAAGT+GGG + chr2_1:55504363-55504382 Msa0213020:CDS 35.0%
! ATAACAGGCTTTTTAACAGG+TGG - chr2_1:55504504-55504523 None:intergenic 35.0%
CTTTCTTTAGACTTAACAGG+TGG - chr2_1:55504558-55504577 None:intergenic 35.0%
CACCTGTTAAGTCTAAAGAA+AGG + chr2_1:55504556-55504575 Msa0213020:CDS 35.0%
GCATGCTTATCAATCAAGAT+AGG - chr2_1:55504588-55504607 None:intergenic 35.0%
TAAGCATGCTTCAAAGAAAC+CGG + chr2_1:55504599-55504618 Msa0213020:CDS 35.0%
TCATCTTTATACCTTCCTTG+GGG - chr2_1:55504684-55504703 None:intergenic 35.0%
AAAGATGATTACCGGAAGAA+AGG + chr2_1:55504696-55504715 Msa0213020:CDS 35.0%
ATTACTGAAGGTGAAATCCT+CGG + chr2_1:55504966-55504985 Msa0213020:CDS 35.0%
GCAAACTCTAGACAAAGATA+TGG + chr2_1:55505025-55505044 Msa0213020:CDS 35.0%
! TCCTTCAACTTTGAAAGGAT+CGG - chr2_1:55505093-55505112 None:intergenic 35.0%
! TTGAAGGATTAGTGAAGAGA+AGG + chr2_1:55505105-55505124 Msa0213020:CDS 35.0%
! TGAAGGATTAGTGAAGAGAA+GGG + chr2_1:55505106-55505125 Msa0213020:CDS 35.0%
CCTCCTGTTATTACTATCAT+GGG + chr2_1:55505170-55505189 Msa0213020:CDS 35.0%
! CATTTTGCAGACAACTCTTT+TGG + chr2_1:55505303-55505322 Msa0213020:intron 35.0%
ATACGGAAGACTAAGGTATA+TGG + chr2_1:55505331-55505350 Msa0213020:intron 35.0%
! TTATTGGTTAGGCTTCATCT+AGG + chr2_1:55505363-55505382 Msa0213020:intron 35.0%
! GGAAAGAAAAGTGCAAAGTT+GGG - chr2_1:55505735-55505754 None:intergenic 35.0%
! AGGAAAGAAAAGTGCAAAGT+TGG - chr2_1:55505736-55505755 None:intergenic 35.0%
TCATGGACGATATCAGATAT+AGG - chr2_1:55505756-55505775 None:intergenic 35.0%
TATATCTGATATCGTCCATG+AGG + chr2_1:55505755-55505774 Msa0213020:intron 35.0%
TATATGATCCTGTAGGCATT+TGG + chr2_1:55505877-55505896 Msa0213020:intron 35.0%
ATATGATCCTGTAGGCATTT+GGG + chr2_1:55505878-55505897 Msa0213020:intron 35.0%
GCTATAGCTTCATTTGTTTG+AGG - chr2_1:55505976-55505995 None:intergenic 35.0%
!! TAAGCATTGAAAATTGGGGT+TGG - chr2_1:55506063-55506082 None:intergenic 35.0%
TTGTCAAATAGTCACTATCG+CGG - chr2_1:55506168-55506187 None:intergenic 35.0%
AAGAAAGCTCTTGCATAACT+CGG - chr2_1:55506358-55506377 None:intergenic 35.0%
ATGCAAGAGCTTTCTTCAAT+TGG + chr2_1:55506362-55506381 Msa0213020:CDS 35.0%
AACAGATAAGTGCTCTTCAA+GGG + chr2_1:55506521-55506540 Msa0213020:intron 35.0%
ATGAAATGCTTAGGTCAGAA+TGG - chr2_1:55506672-55506691 None:intergenic 35.0%
TGCACAATAAATGTGGCAAA+TGG - chr2_1:55506779-55506798 None:intergenic 35.0%
CCACATTTATTGTGCAGAAT+GGG + chr2_1:55506783-55506802 Msa0213020:CDS 35.0%
TTTATTACTTCCTTCAGGTG+CGG + chr2_1:55506960-55506979 Msa0213020:intron 35.0%
TGGGAATTTACAAACCTGTA+CGG - chr2_1:55507038-55507057 None:intergenic 35.0%
! TTTAAGAGCCATGCACATTT+TGG + chr2_1:55507158-55507177 Msa0213020:intron 35.0%
! TTAAGAGCCATGCACATTTT+GGG + chr2_1:55507159-55507178 Msa0213020:intron 35.0%
TTGAATAATGTTCCAGTTGC+TGG + chr2_1:55507260-55507279 Msa0213020:CDS 35.0%
TGCAGAAGCTAATGAAGAAA+GGG - chr2_1:55507399-55507418 None:intergenic 35.0%
TCTTGTTGATGTTCAATACC+TGG + chr2_1:55507529-55507548 Msa0213020:intron 35.0%
AGTCATCAGTAAGTTAAACC+AGG - chr2_1:55507550-55507569 None:intergenic 35.0%
TAACTTACTGATGACTTCTC+CGG + chr2_1:55507554-55507573 Msa0213020:intron 35.0%
AATTAACACCACAGTATCAC+CGG - chr2_1:55507576-55507595 None:intergenic 35.0%
AGCTTATCAAGTTATTGGCA+AGG + chr2_1:55507709-55507728 Msa0213020:intron 35.0%
GCTTATCAAGTTATTGGCAA+GGG + chr2_1:55507710-55507729 Msa0213020:intron 35.0%
! GAAAAAAGAGCATGTTTGCA+AGG - chr2_1:55507980-55507999 None:intergenic 35.0%
!!! TTTGGTCCTTGCTGATTTTT+TGG + chr2_1:55508005-55508024 Msa0213020:intron 35.0%
TGGAATTAGTCCTTGTAATG+TGG + chr2_1:55508050-55508069 Msa0213020:intron 35.0%
GGAATTAGTCCTTGTAATGT+GGG + chr2_1:55508051-55508070 Msa0213020:intron 35.0%
TGAACATTACCCACATTACA+AGG - chr2_1:55508063-55508082 None:intergenic 35.0%
ATAGCAAAAAGTAGCGTTCT+AGG + chr2_1:55508386-55508405 Msa0213020:intron 35.0%
CATTATTCTTGGTCATGACT+AGG + chr2_1:55508534-55508553 Msa0213020:intron 35.0%
TTCAGTGTGACATTATCTTG+TGG - chr2_1:55508598-55508617 None:intergenic 35.0%
! TGTCACACTGAAGTTTTTGA+TGG + chr2_1:55508606-55508625 Msa0213020:CDS 35.0%
! AAGTTTTTGATGGAGACAAC+AGG + chr2_1:55508616-55508635 Msa0213020:CDS 35.0%
! TGATGATGTACGAAAAGCAA+TGG + chr2_1:55508786-55508805 Msa0213020:CDS 35.0%
ATGTACGAAAAGCAATGGAA+GGG + chr2_1:55508791-55508810 Msa0213020:CDS 35.0%
GATTTACCTCAACAGAATCT+AGG - chr2_1:55508819-55508838 None:intergenic 35.0%
CATATGCATAATGTATGCCA+AGG - chr2_1:55508865-55508884 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr2_1:55509066-55509085 Msa0213020:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_1:55509166-55509185 Msa0213020:intron 35.0%
TTACAGGAACAAGTACCAAT+TGG + chr2_1:55509255-55509274 Msa0213020:intron 35.0%
GGTGAAAGAGATTGTTAAAG+AGG + chr2_1:55509428-55509447 Msa0213020:CDS 35.0%
ACATCTTTGCAATAGTTGGA+TGG + chr2_1:55509502-55509521 Msa0213020:intron 35.0%
GTAGTTGGCTATTATGAATG+GGG + chr2_1:55509601-55509620 Msa0213020:intron 35.0%
AGGTCATAGAATTGGTGAAT+AGG + chr2_1:55509683-55509702 Msa0213020:intron 35.0%
GGTCATAGAATTGGTGAATA+GGG + chr2_1:55509684-55509703 Msa0213020:intron 35.0%
TCCCACTTATAACCACTATT+CGG + chr2_1:55509734-55509753 Msa0213020:intron 35.0%
ATGTGTTAAAAGCTGCACAT+TGG - chr2_1:55509773-55509792 None:intergenic 35.0%
ACGAGTGACTTTACTAATCT+AGG + chr2_1:55509840-55509859 Msa0213020:intron 35.0%
GAATAGTACTTATAAGAGGG+TGG - chr2_1:55509942-55509961 None:intergenic 35.0%
AATGTGAGATGCTCAACATA+AGG + chr2_1:55509979-55509998 Msa0213020:intron 35.0%
ATATGATCCCAGTCATTTGA+AGG + chr2_1:55510071-55510090 Msa0213020:intron 35.0%
! TTTGGGGTTAACATATGTTG+CGG - chr2_1:55510123-55510142 None:intergenic 35.0%
CAACATATGTTAACCCCAAA+GGG + chr2_1:55510123-55510142 Msa0213020:intron 35.0%
AACATATGTTAACCCCAAAG+GGG + chr2_1:55510124-55510143 Msa0213020:intron 35.0%
AGATACTATAATGCCCCTTT+GGG - chr2_1:55510140-55510159 None:intergenic 35.0%
AAGATACTATAATGCCCCTT+TGG - chr2_1:55510141-55510160 None:intergenic 35.0%
GAAAAATCCCAAACTACACT+TGG - chr2_1:55510169-55510188 None:intergenic 35.0%
! CTTTTCTTGCAGCATTAGAA+CGG + chr2_1:55510300-55510319 Msa0213020:intron 35.0%
!!! TGTGGGTCTGTTTTAGTTTT+TGG + chr2_1:55510335-55510354 Msa0213020:intron 35.0%
TTCTCTATTAACTCCCTGTA+TGG + chr2_1:55510371-55510390 Msa0213020:intron 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr2_1:55510637-55510656 None:intergenic 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr2_1:55510637-55510656 Msa0213020:intron 35.0%
CAACCTCTTGTGTAAAAAAC+AGG - chr2_1:55510643-55510662 None:intergenic 35.0%
TCATGGGTTCACAACTATTA+AGG - chr2_1:55510763-55510782 None:intergenic 35.0%
ACAACTATTAAGGGTCTCAT+GGG - chr2_1:55510779-55510798 None:intergenic 35.0%
CACACAGTCACAACTATTAA+GGG - chr2_1:55510788-55510807 None:intergenic 35.0%
ACACACAGTCACAACTATTA+AGG - chr2_1:55510789-55510808 None:intergenic 35.0%
CGTTAGAAGACTATGATGAT+TGG + chr2_1:55510900-55510919 Msa0213020:CDS 35.0%
ATGAGAATGGTTCCTATCTT+GGG + chr2_1:55511058-55511077 Msa0213020:three_prime_UTR 35.0%
! TTACGTTCTTTTCCCAAGAT+AGG - chr2_1:55511073-55511092 None:intergenic 35.0%
TTTCAGCTCTTCTGTAAAGA+GGG + chr2_1:55511205-55511224 Msa0213020:three_prime_UTR 35.0%
!! GTGGTGTTACAAGTATTTCT+AGG - chr2_1:55511255-55511274 None:intergenic 35.0%
TTTCCTTGTCTTATATGTGG+TGG - chr2_1:55511274-55511293 None:intergenic 35.0%
AGCTATACTCTCTAACAAGA+AGG - chr2_1:55511434-55511453 None:intergenic 35.0%
! CTTGTTAGAGAGTATAGCTT+AGG + chr2_1:55511435-55511454 Msa0213020:three_prime_UTR 35.0%
GTTTGGTTGGGATAACCTTA+TGG - chr2_1:55503347-55503366 None:intergenic 40.0%
AGAATTGGAATGACCCAGAA+AGG - chr2_1:55503588-55503607 None:intergenic 40.0%
!! GTGTTTTTGTGTTGTTGGGT+TGG + chr2_1:55503652-55503671 Msa0213020:five_prime_UTR 40.0%
!! ACTGATTTTGTTGCTGACCA+AGG + chr2_1:55503877-55503896 Msa0213020:CDS 40.0%
! AATAAAGGTGGTGGTGATAG+TGG + chr2_1:55503946-55503965 Msa0213020:CDS 40.0%
!!! CTCGATTTTAGGATCGAGTT+CGG + chr2_1:55504038-55504057 Msa0213020:CDS 40.0%
!!! TCGATTTTAGGATCGAGTTC+GGG + chr2_1:55504039-55504058 Msa0213020:CDS 40.0%
!! TTCACCGGTTTATCATCCTT+AGG - chr2_1:55504243-55504262 None:intergenic 40.0%
!! CAAAGACGCTGAAGAGTATT+TGG + chr2_1:55504283-55504302 Msa0213020:CDS 40.0%
!! CTGAAGAGTATTTGGCGTAA+AGG + chr2_1:55504291-55504310 Msa0213020:CDS 40.0%
!! GAAGAGTATTTGGCGTAAAG+GGG + chr2_1:55504293-55504312 Msa0213020:CDS 40.0%
TATTTGGCGTAAAGGGGATT+CGG + chr2_1:55504299-55504318 Msa0213020:CDS 40.0%
CTACTCTTAACACTAGGCTT+AGG - chr2_1:55504357-55504376 None:intergenic 40.0%
GTGTTAAGAGTAGTGAAGTG+GGG + chr2_1:55504364-55504383 Msa0213020:CDS 40.0%
TGTTAAGAGTAGTGAAGTGG+GGG + chr2_1:55504365-55504384 Msa0213020:CDS 40.0%
! CTAGATTGTAACATCGGTTG+AGG - chr2_1:55504456-55504475 None:intergenic 40.0%
CTCAACCGATGTTACAATCT+AGG + chr2_1:55504454-55504473 Msa0213020:CDS 40.0%
GAAGGCCTAGATTGTAACAT+CGG - chr2_1:55504462-55504481 None:intergenic 40.0%
TATTCCTGACGAGGATACTT+CGG + chr2_1:55504773-55504792 Msa0213020:CDS 40.0%
GAACTCAATGTCTCTATTCC+CGG + chr2_1:55504795-55504814 Msa0213020:CDS 40.0%
GCCTCCTGTTATTACTATCA+TGG + chr2_1:55505169-55505188 Msa0213020:CDS 40.0%
CCCATGATAGTAATAACAGG+AGG - chr2_1:55505173-55505192 None:intergenic 40.0%
TGGCCCATGATAGTAATAAC+AGG - chr2_1:55505176-55505195 None:intergenic 40.0%
! CTCCATGTGCTGATATTTGT+TGG + chr2_1:55505269-55505288 Msa0213020:intron 40.0%
CACCAACAAATATCAGCACA+TGG - chr2_1:55505274-55505293 None:intergenic 40.0%
GGATCATATACGGAAGACTA+AGG + chr2_1:55505324-55505343 Msa0213020:CDS 40.0%
AAGCAGCTACCTGTTACATT+TGG - chr2_1:55505426-55505445 None:intergenic 40.0%
AAAGTGCAAGTACCTGTTGA+TGG + chr2_1:55505484-55505503 Msa0213020:CDS 40.0%
ACCTTAATCTGTGAGTGTGA+CGG + chr2_1:55505649-55505668 Msa0213020:intron 40.0%
GTTGGGTTACTACAGTAATG+TGG - chr2_1:55505718-55505737 None:intergenic 40.0%
AATCTCTTACCACTACCTCA+TGG - chr2_1:55505773-55505792 None:intergenic 40.0%
AGATTGACCTTGTAACCTCA+AGG + chr2_1:55505788-55505807 Msa0213020:intron 40.0%
GATTGACCTTGTAACCTCAA+GGG + chr2_1:55505789-55505808 Msa0213020:intron 40.0%
TATGATCCTGTAGGCATTTG+GGG + chr2_1:55505879-55505898 Msa0213020:intron 40.0%
!! ATTTACTTGGTGATGGCATG+AGG + chr2_1:55506271-55506290 Msa0213020:intron 40.0%
CAACAGATAAGTGCTCTTCA+AGG + chr2_1:55506520-55506539 Msa0213020:intron 40.0%
! TAATCCTGATAGAAGTGCGA+AGG + chr2_1:55506715-55506734 Msa0213020:CDS 40.0%
! AATCCTGATAGAAGTGCGAA+GGG + chr2_1:55506716-55506735 Msa0213020:CDS 40.0%
GCAGGCATGGATAAATCAAA+AGG + chr2_1:55506752-55506771 Msa0213020:CDS 40.0%
GCCACATTTATTGTGCAGAA+TGG + chr2_1:55506782-55506801 Msa0213020:CDS 40.0%
CCCATTCTGCACAATAAATG+TGG - chr2_1:55506786-55506805 None:intergenic 40.0%
AGGGGAGATATTGTAGTTTG+TGG + chr2_1:55506815-55506834 Msa0213020:CDS 40.0%
! GGAGATATTGTAGTTTGTGG+AGG + chr2_1:55506818-55506837 Msa0213020:CDS 40.0%
GATTCAGAGGAAAGTAAAGC+AGG - chr2_1:55506929-55506948 None:intergenic 40.0%
TTATTACTTCCTTCAGGTGC+GGG + chr2_1:55506961-55506980 Msa0213020:intron 40.0%
GGGAATTTACAAACCTGTAC+GGG - chr2_1:55507037-55507056 None:intergenic 40.0%
! TTTCCCTTGGCATTTTGCAA+TGG + chr2_1:55507082-55507101 Msa0213020:intron 40.0%
TCACCATTGCAAAATGCCAA+GGG - chr2_1:55507088-55507107 None:intergenic 40.0%
TTCACCATTGCAAAATGCCA+AGG - chr2_1:55507089-55507108 None:intergenic 40.0%
CATGGCTCTTAAATGACAGA+TGG - chr2_1:55507151-55507170 None:intergenic 40.0%
! TAAGAGCCATGCACATTTTG+GGG + chr2_1:55507160-55507179 Msa0213020:intron 40.0%
TAAGAACCCCAAAATGTGCA+TGG - chr2_1:55507169-55507188 None:intergenic 40.0%
GTTCTTATATGCATCACTGC+AGG + chr2_1:55507229-55507248 Msa0213020:intron 40.0%
TATGCATCACTGCAGGTTAT+TGG + chr2_1:55507236-55507255 Msa0213020:intron 40.0%
TCAAATACATCACCAGCAAC+TGG - chr2_1:55507275-55507294 None:intergenic 40.0%
! AGTTGCTGGTGATGTATTTG+AGG + chr2_1:55507274-55507293 Msa0213020:CDS 40.0%
GGTTGTTGAATCCCTTGATA+CGG + chr2_1:55507295-55507314 Msa0213020:CDS 40.0%
ATCTCGCAATGACATAACAC+GGG - chr2_1:55507339-55507358 None:intergenic 40.0%
CATCTCGCAATGACATAACA+CGG - chr2_1:55507340-55507359 None:intergenic 40.0%
AGATGAGCGTATTTCAGCAA+AGG + chr2_1:55507355-55507374 Msa0213020:CDS 40.0%
CTGCAGAAGCTAATGAAGAA+AGG - chr2_1:55507400-55507419 None:intergenic 40.0%
! TGAAGGTTGATCTTCAGGTA+TGG + chr2_1:55507471-55507490 Msa0213020:intron 40.0%
CAAGGACTAAAAGCAAAACG+TGG - chr2_1:55507935-55507954 None:intergenic 40.0%
! GGATTTAATGTCAAAGCACC+AGG + chr2_1:55508694-55508713 Msa0213020:CDS 40.0%
GATGTACGAAAAGCAATGGA+AGG + chr2_1:55508790-55508809 Msa0213020:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_1:55509170-55509189 None:intergenic 40.0%
! GGAGTGTGCAGAGTATTAAT+TGG + chr2_1:55509062-55509081 Msa0213020:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr2_1:55509065-55509084 Msa0213020:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_1:55509170-55509189 Msa0213020:intron 40.0%
! CAATTGGCTCAGCAGAAATA+CGG + chr2_1:55509271-55509290 Msa0213020:CDS 40.0%
! AATTGGCTCAGCAGAAATAC+GGG + chr2_1:55509272-55509291 Msa0213020:CDS 40.0%
ATGTATGGTTACAGAGGGAA+AGG + chr2_1:55509329-55509348 Msa0213020:CDS 40.0%
ACAGAGGGAAAGGTTACAAA+AGG + chr2_1:55509339-55509358 Msa0213020:CDS 40.0%
GTGGACATCTTTGCAATAGT+TGG + chr2_1:55509498-55509517 Msa0213020:intron 40.0%
GTAACATTCACCTAACAAGC+CGG - chr2_1:55509713-55509732 None:intergenic 40.0%
GAATAGTGGTTATAAGTGGG+AGG - chr2_1:55509735-55509754 None:intergenic 40.0%
CCCGAATAGTGGTTATAAGT+GGG - chr2_1:55509738-55509757 None:intergenic 40.0%
CCCACTTATAACCACTATTC+GGG + chr2_1:55509735-55509754 Msa0213020:intron 40.0%
ACCCGAATAGTGGTTATAAG+TGG - chr2_1:55509739-55509758 None:intergenic 40.0%
GTTAAAAGCTGCACATTGGA+TGG - chr2_1:55509769-55509788 None:intergenic 40.0%
AACACATCCTACTCATCCTT+TGG + chr2_1:55509786-55509805 Msa0213020:intron 40.0%
GGTTATGCAAGGTTGAAGTA+GGG - chr2_1:55509900-55509919 None:intergenic 40.0%
TGGTTATGCAAGGTTGAAGT+AGG - chr2_1:55509901-55509920 None:intergenic 40.0%
ACCTTGCATAACCATTTGCA+AGG + chr2_1:55509907-55509926 Msa0213020:intron 40.0%
ACCTTGCAAATGGTTATGCA+AGG - chr2_1:55509911-55509930 None:intergenic 40.0%
CTCAACATAAGGAATGCTCT+GGG + chr2_1:55509990-55510009 Msa0213020:intron 40.0%
TCAACATAAGGAATGCTCTG+GGG + chr2_1:55509991-55510010 Msa0213020:intron 40.0%
GCAACATATGTTAACCCCAA+AGG + chr2_1:55510122-55510141 Msa0213020:intron 40.0%
GATACTATAATGCCCCTTTG+GGG - chr2_1:55510139-55510158 None:intergenic 40.0%
! GGGGCATTATAGTATCTTTG+AGG + chr2_1:55510143-55510162 Msa0213020:intron 40.0%
! TTTGAGGCCAAGTGTAGTTT+GGG + chr2_1:55510159-55510178 Msa0213020:intron 40.0%
ATATCCTCTGTCACATGACA+TGG + chr2_1:55510211-55510230 Msa0213020:intron 40.0%
TAAAACAGACCCACAAGCAA+AGG - chr2_1:55510330-55510349 None:intergenic 40.0%
GTGCAATACACCAAAATGGT+GGG - chr2_1:55510610-55510629 None:intergenic 40.0%
TTGCGTGCAATACACCAAAA+TGG - chr2_1:55510614-55510633 None:intergenic 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + chr2_1:55510648-55510667 Msa0213020:intron 40.0%
! GCTTGGATTCACTCTAAAAG+AGG - chr2_1:55510736-55510755 None:intergenic 40.0%
ACAACTATTAAGGCTCTGCT+TGG - chr2_1:55510753-55510772 None:intergenic 40.0%
CACAACTATTAAGGGTCTCA+TGG - chr2_1:55510780-55510799 None:intergenic 40.0%
AGGCAGTAACTACAATAGCA+TGG - chr2_1:55510819-55510838 None:intergenic 40.0%
! GATGTCTTTTGCTTGTGAAC+AGG + chr2_1:55510850-55510869 Msa0213020:intron 40.0%
AGACTATGATGATTGGGAAG+AGG + chr2_1:55510907-55510926 Msa0213020:CDS 40.0%
GACTATGATGATTGGGAAGA+GGG + chr2_1:55510908-55510927 Msa0213020:CDS 40.0%
TCTCTTCTCAACTGTGTTGA+AGG - chr2_1:55510948-55510967 None:intergenic 40.0%
GATGAGAATGGTTCCTATCT+TGG + chr2_1:55511057-55511076 Msa0213020:three_prime_UTR 40.0%
GTTTCAGCTCTTCTGTAAAG+AGG + chr2_1:55511204-55511223 Msa0213020:three_prime_UTR 40.0%
ACACCACCACATATAAGACA+AGG + chr2_1:55511268-55511287 Msa0213020:three_prime_UTR 40.0%
TCTCTAACAAGAAGGAAGCA+TGG - chr2_1:55511426-55511445 None:intergenic 40.0%
TTGGACTTCAACACAGGCTT+AGG - chr2_1:55504012-55504031 None:intergenic 45.0%
! TTAGGATCGAGTTCGGGTTT+AGG + chr2_1:55504045-55504064 Msa0213020:CDS 45.0%
! TAGGATCGAGTTCGGGTTTA+GGG + chr2_1:55504046-55504065 Msa0213020:CDS 45.0%
!! TGGTGTCGATGAGAGAAGTA+AGG + chr2_1:55504098-55504117 Msa0213020:CDS 45.0%
! TGAATCACTTGGCGAGGTTT+TGG + chr2_1:55504125-55504144 Msa0213020:CDS 45.0%
TTTGGAGAAGGCAGAGAAGT+TGG + chr2_1:55504143-55504162 Msa0213020:CDS 45.0%
TTAGGGGGTGAGAGAAGTAA+CGG + chr2_1:55504177-55504196 Msa0213020:CDS 45.0%
GGTTAATAAACCGGCAAGAC+CGG + chr2_1:55504203-55504222 Msa0213020:CDS 45.0%
TCATTCATAACCGGTCTTGC+CGG - chr2_1:55504216-55504235 None:intergenic 45.0%
AAGTGGGGGAATCTCAAGTA+GGG + chr2_1:55504379-55504398 Msa0213020:CDS 45.0%
! ACAGGCTTTTTAACAGGTGG+CGG - chr2_1:55504501-55504520 None:intergenic 45.0%
!! TTCTAGCTCCTACGAAACCA+GGG + chr2_1:55504649-55504668 Msa0213020:CDS 45.0%
TCTTTATACCTTCCTTGGGG+AGG - chr2_1:55504681-55504700 None:intergenic 45.0%
TTCACCACCATTCGTCTTCT+TGG - chr2_1:55504744-55504763 None:intergenic 45.0%
! AAGACGAATGGTGGTGAACA+AGG + chr2_1:55504746-55504765 Msa0213020:CDS 45.0%
ATGGAGTAAAGCAAGTCGCA+AGG + chr2_1:55504839-55504858 Msa0213020:CDS 45.0%
! ATTCTAGAGGTCAGCGATGA+TGG + chr2_1:55504909-55504928 Msa0213020:CDS 45.0%
GCCGATCCTTTCAAAGTTGA+AGG + chr2_1:55505089-55505108 Msa0213020:CDS 45.0%
ACCTCGACAAACTCAAAGAC+AGG + chr2_1:55505147-55505166 Msa0213020:CDS 45.0%
ATCATGGGCCATGTTGATCA+CGG + chr2_1:55505185-55505204 Msa0213020:CDS 45.0%
AGGCTTCATCTAGGCTCATA+TGG + chr2_1:55505372-55505391 Msa0213020:intron 45.0%
!! CCTGTTACATTTGGTGCATC+AGG - chr2_1:55505417-55505436 None:intergenic 45.0%
CCTGATGCACCAAATGTAAC+AGG + chr2_1:55505414-55505433 Msa0213020:intron 45.0%
! GGCAACGTTTTTCCATCAAC+AGG - chr2_1:55505499-55505518 None:intergenic 45.0%
!! GGAGTGTCGAGAAAAACACA+CGG - chr2_1:55505520-55505539 None:intergenic 45.0%
! TGTGTTTTTCTCGACACTCC+CGG + chr2_1:55505520-55505539 Msa0213020:CDS 45.0%
TCACAGATTAAGGTCCCAAC+AGG - chr2_1:55505643-55505662 None:intergenic 45.0%
TGATATCGTCCATGAGGTAG+TGG + chr2_1:55505761-55505780 Msa0213020:intron 45.0%
! CATTTTACAACCGTCCCTTG+AGG - chr2_1:55505806-55505825 None:intergenic 45.0%
CTCAAGGGACGGTTGTAAAA+TGG + chr2_1:55505804-55505823 Msa0213020:intron 45.0%
TGTCTGTTACACTTGCTCCA+CGG - chr2_1:55505915-55505934 None:intergenic 45.0%
ATTGTTGTGGCTGCTGATGA+TGG + chr2_1:55505943-55505962 Msa0213020:CDS 45.0%
TTGGGGTTGGAGACATATGT+TGG - chr2_1:55506050-55506069 None:intergenic 45.0%
GTCAAAGCCCTATAGCATAG+TGG - chr2_1:55506241-55506260 None:intergenic 45.0%
! TTGGTTTGATGCCAGAAGAC+TGG + chr2_1:55506381-55506400 Msa0213020:CDS 45.0%
TGGTTTGATGCCAGAAGACT+GGG + chr2_1:55506382-55506401 Msa0213020:CDS 45.0%
! AACTGTTATGCTTGTTGCCG+AGG + chr2_1:55506567-55506586 Msa0213020:CDS 45.0%
TGCAGAATGGGTCACTTAGA+AGG + chr2_1:55506795-55506814 Msa0213020:CDS 45.0%
GCAGAATGGGTCACTTAGAA+GGG + chr2_1:55506796-55506815 Msa0213020:CDS 45.0%
CAGAATGGGTCACTTAGAAG+GGG + chr2_1:55506797-55506816 Msa0213020:CDS 45.0%
!! GTAGTTTGTGGAGGAGCTTT+TGG + chr2_1:55506827-55506846 Msa0213020:CDS 45.0%
!! TTGTGGAGGAGCTTTTGGAA+AGG + chr2_1:55506832-55506851 Msa0213020:CDS 45.0%
TACACCTTCTATACCCGTAC+AGG + chr2_1:55507021-55507040 Msa0213020:CDS 45.0%
CAAACCTGTACGGGTATAGA+AGG - chr2_1:55507028-55507047 None:intergenic 45.0%
! CTTTTCACGTGCCGTATCAA+GGG - chr2_1:55507309-55507328 None:intergenic 45.0%
ATTTCAGCAAAGGCAGGAGA+TGG + chr2_1:55507365-55507384 Msa0213020:CDS 45.0%
TTAGCTTCTGCAGTTTCGTC+AGG + chr2_1:55507407-55507426 Msa0213020:CDS 45.0%
GTTTCGTCAGGAAAGCTTTC+TGG + chr2_1:55507419-55507438 Msa0213020:CDS 45.0%
GATCATAATTCACGCGACAG+TGG + chr2_1:55507620-55507639 Msa0213020:intron 45.0%
TAATTCACGCGACAGTGGAA+AGG + chr2_1:55507625-55507644 Msa0213020:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_1:55509169-55509188 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_1:55509169-55509188 Msa0213020:intron 45.0%
! CGTATTTCTGCTGAGCCAAT+TGG - chr2_1:55509273-55509292 None:intergenic 45.0%
TCCCTCTGTAACCATACATC+CGG - chr2_1:55509328-55509347 None:intergenic 45.0%
GGAAAGGTTACAAAAGGCTG+TGG + chr2_1:55509345-55509364 Msa0213020:CDS 45.0%
GAATTGGTGAATAGGGACAC+CGG + chr2_1:55509691-55509710 Msa0213020:intron 45.0%
TGGTGATATGACCCGAATAG+TGG - chr2_1:55509749-55509768 None:intergenic 45.0%
CAGTTGTCCAAAGGATGAGT+AGG - chr2_1:55509796-55509815 None:intergenic 45.0%
GTCACGTTTCAGTTGTCCAA+AGG - chr2_1:55509805-55509824 None:intergenic 45.0%
GCTCAACATAAGGAATGCTC+TGG + chr2_1:55509989-55510008 Msa0213020:intron 45.0%
!! GCTCTGGGGATTCTGAAAAT+AGG + chr2_1:55510005-55510024 Msa0213020:intron 45.0%
!! CTTTGAGGCCAAGTGTAGTT+TGG + chr2_1:55510158-55510177 Msa0213020:intron 45.0%
AAAGCCATGTCATGTGACAG+AGG - chr2_1:55510218-55510237 None:intergenic 45.0%
! TGTCACATGACATGGCTTTG+AGG + chr2_1:55510219-55510238 Msa0213020:intron 45.0%
AACGGTTGACCTTTGCTTGT+GGG + chr2_1:55510318-55510337 Msa0213020:intron 45.0%
AAGAAAAGAAAAGGGCAGCC+TGG + chr2_1:55510544-55510563 Msa0213020:intron 45.0%
CGTGCAATACACCAAAATGG+TGG - chr2_1:55510611-55510630 None:intergenic 45.0%
! ACAATTTTACCGTTGCGCCA+AGG + chr2_1:55510708-55510727 Msa0213020:intron 45.0%
! TCACTCTAAAAGAGGAGCCT+TGG - chr2_1:55510728-55510747 None:intergenic 45.0%
GCTTGTGAACAGGTAAATGC+TGG + chr2_1:55510860-55510879 Msa0213020:intron 45.0%
!! GTAAATGCTGGTCTTGAGTG+TGG + chr2_1:55510872-55510891 Msa0213020:CDS 45.0%
TGATGCTGAGGCTTCTTCAA+GGG - chr2_1:55510975-55510994 None:intergenic 45.0%
TTGATGCTGAGGCTTCTTCA+AGG - chr2_1:55510976-55510995 None:intergenic 45.0%
TGAAGAAGCCTCAGCATCAA+TGG + chr2_1:55510976-55510995 Msa0213020:CDS 45.0%
!!! TGTTTTTTTTTTTTTTTTAT+TGG + chr2_1:55509627-55509646 Msa0213020:intron 5.0%
!! AAAGGTGGTGGTGATAGTGG+TGG + chr2_1:55503949-55503968 Msa0213020:CDS 50.0%
TTCAACACAGGCTTAGGAGG+AGG - chr2_1:55504006-55504025 None:intergenic 50.0%
GACTTCAACACAGGCTTAGG+AGG - chr2_1:55504009-55504028 None:intergenic 50.0%
! AGGATCGAGTTCGGGTTTAG+GGG + chr2_1:55504047-55504066 Msa0213020:CDS 50.0%
AGGAATGGTGAGGGTGATGA+TGG + chr2_1:55504078-55504097 Msa0213020:CDS 50.0%
GGTGATTGAATCACTTGGCG+AGG + chr2_1:55504119-55504138 Msa0213020:CDS 50.0%
!!! ACTTGGCGAGGTTTTGGAGA+AGG + chr2_1:55504131-55504150 Msa0213020:CDS 50.0%
GGGTGAGAGAAGTAACGGTT+CGG + chr2_1:55504182-55504201 Msa0213020:CDS 50.0%
! TAAAGGGGATTCGGTTGCGA+CGG + chr2_1:55504308-55504327 Msa0213020:CDS 50.0%
GACGGTGAAGAAGGTTGTGA+AGG + chr2_1:55504326-55504345 Msa0213020:CDS 50.0%
GAAGTGGGGGAATCTCAAGT+AGG + chr2_1:55504378-55504397 Msa0213020:CDS 50.0%
AGTGGGGGAATCTCAAGTAG+GGG + chr2_1:55504380-55504399 Msa0213020:CDS 50.0%
ATCGGTTGAGGTCTCGAAAG+AGG - chr2_1:55504444-55504463 None:intergenic 50.0%
!! TTTTTAACAGGTGGCGGTGG+CGG - chr2_1:55504495-55504514 None:intergenic 50.0%
!! GTTCTAGCTCCTACGAAACC+AGG + chr2_1:55504648-55504667 Msa0213020:CDS 50.0%
! CAGACGAAGCACCTTTCTTC+CGG - chr2_1:55504710-55504729 None:intergenic 50.0%
!! GGAAGAAAGGTGCTTCGTCT+GGG + chr2_1:55504709-55504728 Msa0213020:CDS 50.0%
!! GAAGAAAGGTGCTTCGTCTG+GGG + chr2_1:55504710-55504729 Msa0213020:CDS 50.0%
AGGAGGACCAAGAAGACGAA+TGG + chr2_1:55504734-55504753 Msa0213020:CDS 50.0%
AGGACCAAGAAGACGAATGG+TGG + chr2_1:55504737-55504756 Msa0213020:CDS 50.0%
! CGAATGGTGGTGAACAAGGA+TGG + chr2_1:55504750-55504769 Msa0213020:CDS 50.0%
CAAGGATGGTATTCCTGACG+AGG + chr2_1:55504764-55504783 Msa0213020:CDS 50.0%
! AGTTCCGAAGTATCCTCGTC+AGG - chr2_1:55504780-55504799 None:intergenic 50.0%
TATTCCCGGCACTGCAAGAA+AGG + chr2_1:55504809-55504828 Msa0213020:CDS 50.0%
ATTCCCGGCACTGCAAGAAA+GGG + chr2_1:55504810-55504829 Msa0213020:CDS 50.0%
CTGCAAGAAAGGGACGGAAA+TGG + chr2_1:55504820-55504839 Msa0213020:CDS 50.0%
GAGTAAAGCAAGTCGCAAGG+CGG + chr2_1:55504842-55504861 Msa0213020:CDS 50.0%
GGAGGAGTTGGCGTACAATT+TGG + chr2_1:55504941-55504960 Msa0213020:CDS 50.0%
TCCAAGGGAGTTAAGCCAGA+TGG + chr2_1:55504999-55505018 Msa0213020:CDS 50.0%
CCAAGGGAGTTAAGCCAGAT+GGG + chr2_1:55505000-55505019 Msa0213020:CDS 50.0%
CAAGGGAGTTAAGCCAGATG+GGG + chr2_1:55505001-55505020 Msa0213020:CDS 50.0%
! TCTAGAGTTTGCACCCCATC+TGG - chr2_1:55505017-55505036 None:intergenic 50.0%
! GCCTGTCTTTGAGTTTGTCG+AGG - chr2_1:55505151-55505170 None:intergenic 50.0%
TTGCCTTGCCGTGATCAACA+TGG - chr2_1:55505196-55505215 None:intergenic 50.0%
!! TAGCTGCTTCTGAAGCTGGT+GGG + chr2_1:55505437-55505456 Msa0213020:CDS 50.0%
GTGGGATCACACAGGGAATT+GGG + chr2_1:55505455-55505474 Msa0213020:CDS 50.0%
TGGGATCACACAGGGAATTG+GGG + chr2_1:55505456-55505475 Msa0213020:CDS 50.0%
! GTGTTTTTCTCGACACTCCC+GGG + chr2_1:55505521-55505540 Msa0213020:CDS 50.0%
GCCGTCACACTCACAGATTA+AGG - chr2_1:55505653-55505672 None:intergenic 50.0%
GACCTTGTAACCTCAAGGGA+CGG + chr2_1:55505793-55505812 Msa0213020:intron 50.0%
AACCGTCCCTTGAGGTTACA+AGG - chr2_1:55505798-55505817 None:intergenic 50.0%
TCATTGCCCCAAATGCCTAC+AGG - chr2_1:55505888-55505907 None:intergenic 50.0%
GTCTGTTACACTTGCTCCAC+GGG - chr2_1:55505914-55505933 None:intergenic 50.0%
ATAGCTCATGCCAAAGCAGC+AGG + chr2_1:55505991-55506010 Msa0213020:CDS 50.0%
! AATGGGTACTCCTGCTGCTT+TGG - chr2_1:55506004-55506023 None:intergenic 50.0%
AGCTCTTGCATAACTCGGTC+TGG - chr2_1:55506353-55506372 None:intergenic 50.0%
GGTTTGATGCCAGAAGACTG+GGG + chr2_1:55506383-55506402 Msa0213020:CDS 50.0%
!! GTGCGGGCTTTATTCGATGA+TGG + chr2_1:55506977-55506996 Msa0213020:CDS 50.0%
!! CGGGCTTTATTCGATGATGG+TGG + chr2_1:55506980-55506999 Msa0213020:CDS 50.0%
! CCTTTTCACGTGCCGTATCA+AGG - chr2_1:55507310-55507329 None:intergenic 50.0%
CCTTGATACGGCACGTGAAA+AGG + chr2_1:55507307-55507326 Msa0213020:CDS 50.0%
GAGCGTATTTCAGCAAAGGC+AGG + chr2_1:55507359-55507378 Msa0213020:CDS 50.0%
TGACTTCTCCGGTGATACTG+TGG + chr2_1:55507565-55507584 Msa0213020:intron 50.0%
! GGCTTGTTTGACGGCTTCAA+TGG - chr2_1:55508563-55508582 None:intergenic 50.0%
ATCTTGTGGTAGCACCTGCA+GGG - chr2_1:55508584-55508603 None:intergenic 50.0%
TATCTTGTGGTAGCACCTGC+AGG - chr2_1:55508585-55508604 None:intergenic 50.0%
CACAAGCGATGTTGACCTTG+CGG + chr2_1:55508648-55508667 Msa0213020:CDS 50.0%
! GCATAGCTTTTCACAGAGCC+TGG - chr2_1:55508715-55508734 None:intergenic 50.0%
AGGGCTCCTAGATTCTGTTG+AGG + chr2_1:55508810-55508829 Msa0213020:CDS 50.0%
! ATACGGGCTGTATTCAGCAG+TGG + chr2_1:55509288-55509307 Msa0213020:CDS 50.0%
GCTGTATTCAGCAGTGGTAG+CGG + chr2_1:55509294-55509313 Msa0213020:CDS 50.0%
TGCCGGATGTATGGTTACAG+AGG + chr2_1:55509323-55509342 Msa0213020:CDS 50.0%
GCCGGATGTATGGTTACAGA+GGG + chr2_1:55509324-55509343 Msa0213020:CDS 50.0%
!! AATAGGGACACCGGCTTGTT+AGG + chr2_1:55509700-55509719 Msa0213020:intron 50.0%
GGACAACTGAAACGTGACTC+AGG + chr2_1:55509807-55509826 Msa0213020:intron 50.0%
CAACTGAAACGTGACTCAGG+CGG + chr2_1:55509810-55509829 Msa0213020:intron 50.0%
GGAAGCTCTCACCTTGCAAA+TGG - chr2_1:55509921-55509940 None:intergenic 50.0%
GAACGGTTGACCTTTGCTTG+TGG + chr2_1:55510317-55510336 Msa0213020:intron 50.0%
ACTAAAGCTCCTGCATACGC+AGG + chr2_1:55510570-55510589 Msa0213020:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG + chr2_1:55510571-55510590 Msa0213020:intron 50.0%
GTAAAGTCGGGTTCAAGTCC+TGG - chr2_1:55510669-55510688 None:intergenic 50.0%
!! GATAGTGGTGGTGGTGGTGT+TGG + chr2_1:55503961-55503980 Msa0213020:CDS 55.0%
! GGATCGAGTTCGGGTTTAGG+GGG + chr2_1:55504048-55504067 Msa0213020:CDS 55.0%
TTAGGGGGTTCGTCGAGGAA+TGG + chr2_1:55504063-55504082 Msa0213020:CDS 55.0%
GGTTCGTCGAGGAATGGTGA+GGG + chr2_1:55504069-55504088 Msa0213020:CDS 55.0%
TTCGGTTGCGACGGTGAAGA+AGG + chr2_1:55504317-55504336 Msa0213020:CDS 55.0%
GTGGGGGAATCTCAAGTAGG+GGG + chr2_1:55504381-55504400 Msa0213020:CDS 55.0%
GGGAATCTCAAGTAGGGGGA+GGG + chr2_1:55504385-55504404 Msa0213020:CDS 55.0%
GGAATCTCAAGTAGGGGGAG+GGG + chr2_1:55504386-55504405 Msa0213020:CDS 55.0%
TGAGGTCTCGAAAGAGGCTG+AGG - chr2_1:55504438-55504457 None:intergenic 55.0%
!! GGCTTTTTAACAGGTGGCGG+TGG - chr2_1:55504498-55504517 None:intergenic 55.0%
AGCTCCTACGAAACCAGGGA+AGG + chr2_1:55504653-55504672 Msa0213020:CDS 55.0%
!! CGGAAGAAAGGTGCTTCGTC+TGG + chr2_1:55504708-55504727 Msa0213020:CDS 55.0%
!! AAAGGTGCTTCGTCTGGGGA+AGG + chr2_1:55504714-55504733 Msa0213020:CDS 55.0%
CTTTACAGGAGCAGCATCCC+TGG - chr2_1:55504883-55504902 None:intergenic 55.0%
CAGGGATGCTGCTCCTGTAA+AGG + chr2_1:55504881-55504900 Msa0213020:CDS 55.0%
! GGTCAGCGATGATGGTATGC+TGG + chr2_1:55504917-55504936 Msa0213020:CDS 55.0%
! CAGCGATGATGGTATGCTGG+TGG + chr2_1:55504920-55504939 Msa0213020:CDS 55.0%
! CGATGATGGTATGCTGGTGG+AGG + chr2_1:55504923-55504942 Msa0213020:CDS 55.0%
TGGTATGCTGGTGGAGGAGT+TGG + chr2_1:55504929-55504948 Msa0213020:CDS 55.0%
CTCGGCTCTCTGTACTCCAA+GGG + chr2_1:55504984-55505003 Msa0213020:CDS 55.0%
! CCCATCTGGCTTAACTCCCT+TGG - chr2_1:55505003-55505022 None:intergenic 55.0%
!! CAGGTAGCTGCTTCTGAAGC+TGG + chr2_1:55505433-55505452 Msa0213020:intron 55.0%
!! GTAGCTGCTTCTGAAGCTGG+TGG + chr2_1:55505436-55505455 Msa0213020:CDS 55.0%
TGAAGCTGGTGGGATCACAC+AGG + chr2_1:55505447-55505466 Msa0213020:CDS 55.0%
GAAGCTGGTGGGATCACACA+GGG + chr2_1:55505448-55505467 Msa0213020:CDS 55.0%
GGTGGGATCACACAGGGAAT+TGG + chr2_1:55505454-55505473 Msa0213020:CDS 55.0%
AACCAAGCATACCTCGTGCC+CGG - chr2_1:55505542-55505561 None:intergenic 55.0%
TTGATGCCAGAAGACTGGGG+TGG + chr2_1:55506386-55506405 Msa0213020:CDS 55.0%
ATGTCACCACCCCAGTCTTC+TGG - chr2_1:55506395-55506414 None:intergenic 55.0%
TGGTGACATCCCGATGGTTC+AGG + chr2_1:55506406-55506425 Msa0213020:CDS 55.0%
GTGCCCTTCGCACTTCTATC+AGG - chr2_1:55506722-55506741 None:intergenic 55.0%
! TGCGAAGGGCACAGTCATTG+AGG + chr2_1:55506730-55506749 Msa0213020:CDS 55.0%
! AAGGGCACAGTCATTGAGGC+AGG + chr2_1:55506734-55506753 Msa0213020:CDS 55.0%
CACAGTCATTGAGGCAGGCA+TGG + chr2_1:55506739-55506758 Msa0213020:CDS 55.0%
CGAATAAAGCCCGCACCTGA+AGG - chr2_1:55506973-55506992 None:intergenic 55.0%
AGCAAAGGCAGGAGATGGCA+AGG + chr2_1:55507370-55507389 Msa0213020:CDS 55.0%
! CACCTGCAGGGCTTGTTTGA+CGG - chr2_1:55508572-55508591 None:intergenic 55.0%
TTGCTTTGCTTGCAGCCGCA+AGG - chr2_1:55508666-55508685 None:intergenic 55.0%
GCTGTGGCATTCGAGTCATG+CGG + chr2_1:55509361-55509380 Msa0213020:CDS 55.0%
TGGCATTCGAGTCATGCGGA+AGG + chr2_1:55509365-55509384 Msa0213020:CDS 55.0%
GGCATTCGAGTCATGCGGAA+GGG + chr2_1:55509366-55509385 Msa0213020:CDS 55.0%
! TGCAGGAGCTTTAGTGCACC+AGG - chr2_1:55510565-55510584 None:intergenic 55.0%
CTCCTGCATACGCAGGGTTT+GGG + chr2_1:55510577-55510596 Msa0213020:intron 55.0%
TTCCCAAACCCTGCGTATGC+AGG - chr2_1:55510582-55510601 None:intergenic 55.0%
TGCATACGCAGGGTTTGGGA+AGG + chr2_1:55510581-55510600 Msa0213020:intron 55.0%
GCATACGCAGGGTTTGGGAA+GGG + chr2_1:55510582-55510601 Msa0213020:intron 55.0%
CATACGCAGGGTTTGGGAAG+GGG + chr2_1:55510583-55510602 Msa0213020:intron 55.0%
AAAGAGGAGCCTTGGCGCAA+CGG - chr2_1:55510720-55510739 None:intergenic 55.0%
AGCAGCTGCCATTGATGCTG+AGG - chr2_1:55510987-55511006 None:intergenic 55.0%
AGCATCAATGGCAGCTGCTG+TGG + chr2_1:55510988-55511007 Msa0213020:CDS 55.0%
ATCAATGGCAGCTGCTGTGG+AGG + chr2_1:55510991-55511010 Msa0213020:CDS 55.0%
TCAATGGCAGCTGCTGTGGA+GGG + chr2_1:55510992-55511011 Msa0213020:CDS 55.0%
!! GGTGGTGGTGATAGTGGTGG+TGG + chr2_1:55503952-55503971 Msa0213020:CDS 60.0%
!! GGTGGTGATAGTGGTGGTGG+TGG + chr2_1:55503955-55503974 Msa0213020:CDS 60.0%
!! AGTGGTGGTGGTGGTGTTGG+TGG + chr2_1:55503964-55503983 Msa0213020:CDS 60.0%
GGGTTCGTCGAGGAATGGTG+AGG + chr2_1:55504068-55504087 Msa0213020:CDS 60.0%
GGGGAATCTCAAGTAGGGGG+AGG + chr2_1:55504384-55504403 Msa0213020:CDS 60.0%
TCAAGTAGGGGGAGGGGAGA+AGG + chr2_1:55504392-55504411 Msa0213020:CDS 60.0%
GCAATCGCAGGGTCAACTGC+CGG - chr2_1:55504621-55504640 None:intergenic 60.0%
TGACCCTGCGATTGCTCGAG+CGG + chr2_1:55504626-55504645 Msa0213020:CDS 60.0%
GAACCGCTCGAGCAATCGCA+GGG - chr2_1:55504632-55504651 None:intergenic 60.0%
AGAACCGCTCGAGCAATCGC+AGG - chr2_1:55504633-55504652 None:intergenic 60.0%
GGAGCCTTCCCTGGTTTCGT+AGG - chr2_1:55504660-55504679 None:intergenic 60.0%
CGTCCCTTTCTTGCAGTGCC+GGG - chr2_1:55504816-55504835 None:intergenic 60.0%
CCGTCCCTTTCTTGCAGTGC+CGG - chr2_1:55504817-55504836 None:intergenic 60.0%
CCGGCACTGCAAGAAAGGGA+CGG + chr2_1:55504814-55504833 Msa0213020:CDS 60.0%
TCGCAAGGCGGTACGACTTC+AGG + chr2_1:55504854-55504873 Msa0213020:CDS 60.0%
GGTACGACTTCAGGCTGCCA+GGG + chr2_1:55504863-55504882 Msa0213020:CDS 60.0%
CCTTGGAGTACAGAGAGCCG+AGG - chr2_1:55504986-55505005 None:intergenic 60.0%
CCTCGGCTCTCTGTACTCCA+AGG + chr2_1:55504983-55505002 Msa0213020:CDS 60.0%
GGGCCATGTTGATCACGGCA+AGG + chr2_1:55505190-55505209 Msa0213020:CDS 60.0%
ACCAAGCATACCTCGTGCCC+GGG - chr2_1:55505541-55505560 None:intergenic 60.0%
! TTTGGGGCAATGAGAGCCCG+TGG + chr2_1:55505895-55505914 Msa0213020:CDS 60.0%
AGCCGTCAAACAAGCCCTGC+AGG + chr2_1:55508567-55508586 Msa0213020:CDS 60.0%
!! AGTGGTAGCGGTCGTGTTGC+CGG + chr2_1:55509306-55509325 Msa0213020:CDS 60.0%
CGGTCGTGTTGCCGGATGTA+TGG + chr2_1:55509314-55509333 Msa0213020:CDS 60.0%
GCTCCTGCATACGCAGGGTT+TGG + chr2_1:55510576-55510595 Msa0213020:intron 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr2_1:55510597-55510616 Msa0213020:intron 60.0%
CGGGTTTAGGGGGTTCGTCG+AGG + chr2_1:55504058-55504077 Msa0213020:CDS 65.0%
! TTAACAGGTGGCGGTGGCGG+CGG - chr2_1:55504492-55504511 None:intergenic 65.0%
GGAAGGCTCCTCCCCAAGGA+AGG + chr2_1:55504670-55504689 Msa0213020:CDS 65.0%
GGTGCTTCGTCTGGGGAAGG+AGG + chr2_1:55504717-55504736 Msa0213020:CDS 65.0%
CGGTACGACTTCAGGCTGCC+AGG + chr2_1:55504862-55504881 Msa0213020:CDS 65.0%
TCCCGGGCACGAGGTATGCT+TGG + chr2_1:55505537-55505556 Msa0213020:intron 65.0%
CTGGGGTGGTGACATCCCGA+TGG + chr2_1:55506400-55506419 Msa0213020:CDS 65.0%
GCAGCTGCTGTGGAGGGAGT+AGG + chr2_1:55510998-55511017 Msa0213020:CDS 65.0%
! TAACAGGTGGCGGTGGCGGC+GGG - chr2_1:55504491-55504510 None:intergenic 70.0%
CCTTGGGGAGGAGCCTTCCC+TGG - chr2_1:55504669-55504688 None:intergenic 70.0%
CCAGGGAAGGCTCCTCCCCA+AGG + chr2_1:55504666-55504685 Msa0213020:CDS 70.0%
TCTCGACACTCCCGGGCACG+AGG + chr2_1:55505528-55505547 Msa0213020:CDS 70.0%
! GGTGGCGGCGGGGCTATCGA+AGG - chr2_1:55504480-55504499 None:intergenic 75.0%
! AACAGGTGGCGGTGGCGGCG+GGG - chr2_1:55504490-55504509 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 55503298 55511511 55503298 ID=Msa0213020;Name=Msa0213020
chr2_1 mRNA 55503298 55511511 55503298 ID=Msa0213020-mRNA-1;Parent=Msa0213020;Name=Msa0213020-mRNA-1;_AED=0.04;_eAED=0.04;_QI=384|1|1|1|1|1|12|484|1022
chr2_1 exon 55503298 55505211 55503298 ID=Msa0213020-mRNA-1:exon:15405;Parent=Msa0213020-mRNA-1
chr2_1 exon 55505313 55505345 55505313 ID=Msa0213020-mRNA-1:exon:15406;Parent=Msa0213020-mRNA-1
chr2_1 exon 55505436 55505549 55505436 ID=Msa0213020-mRNA-1:exon:15407;Parent=Msa0213020-mRNA-1
chr2_1 exon 55505892 55506041 55505892 ID=Msa0213020-mRNA-1:exon:15408;Parent=Msa0213020-mRNA-1
chr2_1 exon 55506329 55506427 55506329 ID=Msa0213020-mRNA-1:exon:15409;Parent=Msa0213020-mRNA-1
chr2_1 exon 55506526 55506588 55506526 ID=Msa0213020-mRNA-1:exon:15410;Parent=Msa0213020-mRNA-1
chr2_1 exon 55506698 55506853 55506698 ID=Msa0213020-mRNA-1:exon:15411;Parent=Msa0213020-mRNA-1
chr2_1 exon 55506977 55507042 55506977 ID=Msa0213020-mRNA-1:exon:15412;Parent=Msa0213020-mRNA-1
chr2_1 exon 55507251 55507487 55507251 ID=Msa0213020-mRNA-1:exon:15413;Parent=Msa0213020-mRNA-1
chr2_1 exon 55508556 55508831 55508556 ID=Msa0213020-mRNA-1:exon:15414;Parent=Msa0213020-mRNA-1
chr2_1 exon 55509261 55509449 55509261 ID=Msa0213020-mRNA-1:exon:15415;Parent=Msa0213020-mRNA-1
chr2_1 exon 55510872 55511511 55510872 ID=Msa0213020-mRNA-1:exon:15416;Parent=Msa0213020-mRNA-1
chr2_1 five_prime_UTR 55503298 55503681 55503298 ID=Msa0213020-mRNA-1:five_prime_utr;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55503682 55505211 55503682 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55505313 55505345 55505313 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55505436 55505549 55505436 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55505892 55506041 55505892 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55506329 55506427 55506329 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55506526 55506588 55506526 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55506698 55506853 55506698 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55506977 55507042 55506977 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55507251 55507487 55507251 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55508556 55508831 55508556 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55509261 55509449 55509261 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 CDS 55510872 55511027 55510872 ID=Msa0213020-mRNA-1:cds;Parent=Msa0213020-mRNA-1
chr2_1 three_prime_UTR 55511028 55511511 55511028 ID=Msa0213020-mRNA-1:three_prime_utr;Parent=Msa0213020-mRNA-1
Gene Sequence

>Msa0213020

ATGCTTATATTAGTTGGTAACGTGCAAGGAACTTCAATGAGTTCTCTTGCTTCACCAATAAGTTTAGGTAGTTCTTCTAGAATGTCACATTCTGTTGTTAGAAGAGTTTCTCTTTCTAGTTCTAGAAGGAATTGTATAGGGAAAAAAAGATGGCATTGTGTTTCTTTGTCTGTTTGTAGATATTCAGTTACTACAACTGATTTTGTTGCTGACCAAGGAAATTCTGTTTCATCACTTGATTCTTCTAACAATGATGATAGTAATAATAAAGGTGGTGGTGATAGTGGTGGTGGTGGTGTTGGTGGTAGTTTTGTACTTAAACCTCCTCCTAAGCCTGTGTTGAAGTCCAATAATGACTCGATTTTAGGATCGAGTTCGGGTTTAGGGGGTTCGTCGAGGAATGGTGAGGGTGATGATGGTGTCGATGAGAGAAGTAAGGTGATTGAATCACTTGGCGAGGTTTTGGAGAAGGCAGAGAAGTTGGAGAATTCTAAGTTAGGGGGTGAGAGAAGTAACGGTTCGGTTAATAAACCGGCAAGACCGGTTATGAATGATAAACCTAAGGATGATAAACCGGTGAATTCATTACAGAAACATAAGGCAAAGACGCTGAAGAGTATTTGGCGTAAAGGGGATTCGGTTGCGACGGTGAAGAAGGTTGTGAAGGAAGTACCTAAGCCTAGTGTTAAGAGTAGTGAAGTGGGGGAATCTCAAGTAGGGGGAGGGGAGAAGGTAATGTCTCAGTCGAGTGATCCTCAGCCTCTTTCGAGACCTCAACCGATGTTACAATCTAGGCCTTCGATAGCCCCGCCGCCACCGCCACCTGTTAAAAAGCCTGTTATCTTGAAGGATAATAAAGGTCAAGGTGAAACACCACCTGTTAAGTCTAAAGAAAGGAAGGGACCTATCTTGATTGATAAGCATGCTTCAAAGAAACCGGCAGTTGACCCTGCGATTGCTCGAGCGGTTCTAGCTCCTACGAAACCAGGGAAGGCTCCTCCCCAAGGAAGGTATAAAGATGATTACCGGAAGAAAGGTGCTTCGTCTGGGGAAGGAGGACCAAGAAGACGAATGGTGGTGAACAAGGATGGTATTCCTGACGAGGATACTTCGGAACTCAATGTCTCTATTCCCGGCACTGCAAGAAAGGGACGGAAATGGAGTAAAGCAAGTCGCAAGGCGGTACGACTTCAGGCTGCCAGGGATGCTGCTCCTGTAAAGGTTGAAATTCTAGAGGTCAGCGATGATGGTATGCTGGTGGAGGAGTTGGCGTACAATTTGGCTATTACTGAAGGTGAAATCCTCGGCTCTCTGTACTCCAAGGGAGTTAAGCCAGATGGGGTGCAAACTCTAGACAAAGATATGGTGAAGATGATTTGTAAAGATTATGATGTTGAAGTCATAGATGCCGATCCTTTCAAAGTTGAAGGATTAGTGAAGAGAAGGGAAATTCTAGAAGAAGAAGACCTCGACAAACTCAAAGACAGGCCTCCTGTTATTACTATCATGGGCCATGTTGATCACGGCAAGACAACTCTTTTGGATCATATACGGAAGACTAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGAAAAACGTTGCCGTGTGTTTTTCTCGACACTCCCGGGCACGAGGCATTTGGGGCAATGAGAGCCCGTGGAGCAAGTGTAACAGACATTTGTATTATTGTTGTGGCTGCTGATGATGGTATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTACCCATTATAATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGACCGAGTTATGCAAGAGCTTTCTTCAATTGGTTTGATGCCAGAAGACTGGGGTGGTGACATCCCGATGGTTCAGATAAGTGCTCTTCAAGGGAAGAATGTTGATGATCTTTTGGAAACTGTTATGCTTGTTGCCGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCAGGCATGGATAAATCAAAAGGACCATTTGCCACATTTATTGTGCAGAATGGGTCACTTAGAAGGGGAGATATTGTAGTTTGTGGAGGAGCTTTTGGAAAGGTGCGGGCTTTATTCGATGATGGTGGAAAGCGTGTCGATGTAGCTACACCTTCTATACCCGTACAGGTTATTGGATTGAATAATGTTCCAGTTGCTGGTGATGTATTTGAGGTTGTTGAATCCCTTGATACGGCACGTGAAAAGGCAGAGTCCCGTGTTATGTCATTGCGAGATGAGCGTATTTCAGCAAAGGCAGGAGATGGCAAGGTCACCCTTTCTTCATTAGCTTCTGCAGTTTCGTCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTGAATATTATTTTGAAGGTTGATCTTCAGGGATCCATTGAAGCCGTCAAACAAGCCCTGCAGGTGCTACCACAAGATAATGTCACACTGAAGTTTTTGATGGAGACAACAGGCGATGTAAGCACAAGCGATGTTGACCTTGCGGCTGCAAGCAAAGCAATTATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTGAAAAGCTATGCAGATAATAAAGCCGTTGAGATAAGATTATATAGAGTTATTTATGAATTAATTGATGATGTACGAAAAGCAATGGAAGGGCTCCTAGATTCTGTTGAGGAACAAGTACCAATTGGCTCAGCAGAAATACGGGCTGTATTCAGCAGTGGTAGCGGTCGTGTTGCCGGATGTATGGTTACAGAGGGAAAGGTTACAAAAGGCTGTGGCATTCGAGTCATGCGGAAGGGAAAAATAGTTCATGTTGGTATTCTTGATTCTTTGAGACGGGTGAAAGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGACTTGCGTTAGAAGACTATGATGATTGGGAAGAGGGCGACATTCTTGAAGCCTTCAACACAGTTGAGAAGAGAAGAACCCTTGAAGAAGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTAGGATCTTAA
Protein sequence

>Msa0213020

MLILVGNVQGTSMSSLASPISLGSSSRMSHSVVRRVSLSSSRRNCIGKKRWHCVSLSVCRYSVTTTDFVADQGNSVSSLDSSNNDDSNNKGGGDSGGGGVGGSFVLKPPPKPVLKSNNDSILGSSSGLGGSSRNGEGDDGVDERSKVIESLGEVLEKAEKLENSKLGGERSNGSVNKPARPVMNDKPKDDKPVNSLQKHKAKTLKSIWRKGDSVATVKKVVKEVPKPSVKSSEVGESQVGGGEKVMSQSSDPQPLSRPQPMLQSRPSIAPPPPPPVKKPVILKDNKGQGETPPVKSKERKGPILIDKHASKKPAVDPAIARAVLAPTKPGKAPPQGRYKDDYRKKGASSGEGGPRRRMVVNKDGIPDEDTSELNVSIPGTARKGRKWSKASRKAVRLQAARDAAPVKVEILEVSDDGMLVEELAYNLAITEGEILGSLYSKGVKPDGVQTLDKDMVKMICKDYDVEVIDADPFKVEGLVKRREILEEEDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPVDGKTLPCVFLDTPGHEAFGAMRARGASVTDICIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALQGKNVDDLLETVMLVAELQELKANPDRSAKGTVIEAGMDKSKGPFATFIVQNGSLRRGDIVVCGGAFGKVRALFDDGGKRVDVATPSIPVQVIGLNNVPVAGDVFEVVESLDTAREKAESRVMSLRDERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLMETTGDVSTSDVDLAAASKAIIFGFNVKAPGSVKSYADNKAVEIRLYRVIYELIDDVRKAMEGLLDSVEEQVPIGSAEIRAVFSSGSGRVAGCMVTEGKVTKGCGIRVMRKGKIVHVGILDSLRRVKEIVKEVNAGLECGLALEDYDDWEEGDILEAFNTVEKRRTLEEASASMAAAVEGVGS*