AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038880 MtrunA17_Chr7g0273281 96.620 503 11 3 1 498 1 502 0.0 969
Msa1038880 MtrunA17_Chr4g0066581 54.433 485 208 3 20 494 8 489 0.0 528
Msa1038880 MtrunA17_Chr2g0286721 56.552 435 188 1 60 493 51 485 2.53e-176 504
Msa1038880 MtrunA17_Chr7g0259471 50.881 454 223 0 40 493 22 475 1.91e-161 466
Msa1038880 MtrunA17_Chr7g0259221 51.762 454 219 0 40 493 24 477 3.05e-161 466
Msa1038880 MtrunA17_Chr1g0155221 46.725 458 236 3 39 488 28 485 6.57e-141 414
Msa1038880 MtrunA17_Chr8g0373181 47.816 435 222 2 63 492 52 486 1.63e-138 408
Msa1038880 MtrunA17_Chr7g0273261 80.973 226 41 1 267 492 15 238 1.29e-129 377
Msa1038880 MtrunA17_Chr8g0373191 44.191 439 220 3 58 491 39 457 1.76e-117 353
Msa1038880 MtrunA17_Chr7g0273271 74.227 194 50 0 44 237 13 206 4.97e-101 302
Msa1038880 MtrunA17_Chr6g0457781 33.065 496 289 14 20 495 74 546 1.90e-71 236
Msa1038880 MtrunA17_Chr7g0250881 32.661 496 299 13 16 495 30 506 2.02e-71 235
Msa1038880 MtrunA17_Chr5g0404191 48.624 218 112 0 57 274 49 266 1.32e-68 222
Msa1038880 MtrunA17_Chr4g0021771 30.178 507 304 11 11 488 14 499 5.07e-64 216
Msa1038880 MtrunA17_Chr2g0282031 33.107 441 275 7 65 488 60 497 3.09e-60 206
Msa1038880 MtrunA17_Chr4g0032021 31.164 507 297 13 18 491 67 554 4.63e-58 201
Msa1038880 MtrunA17_Chr1g0213631 34.271 391 228 8 118 488 48 429 1.89e-56 194
Msa1038880 MtrunA17_Chr4g0039651 29.918 488 305 9 31 489 19 498 6.37e-56 194
Msa1038880 MtrunA17_Chr1g0213611 32.316 393 232 10 120 488 143 525 4.78e-55 193
Msa1038880 MtrunA17_Chr4g0034681 28.571 490 322 8 30 491 2 491 5.29e-53 187
Msa1038880 MtrunA17_Chr7g0214451 32.051 390 241 8 116 488 94 476 2.37e-52 184
Msa1038880 MtrunA17_Chr3g0144361 29.412 459 294 7 63 491 33 491 1.65e-51 182
Msa1038880 MtrunA17_Chr4g0036021 28.384 458 301 6 63 493 32 489 1.29e-49 177
Msa1038880 MtrunA17_Chr4g0004821 29.436 479 314 9 27 491 4 472 3.10e-49 176
Msa1038880 MtrunA17_Chr6g0486021 27.869 488 319 11 22 491 14 486 2.31e-48 174
Msa1038880 MtrunA17_Chr5g0432581 28.976 459 290 8 63 488 24 479 6.37e-47 170
Msa1038880 MtrunA17_Chr6g0485661 28.016 489 311 10 20 483 30 502 9.45e-46 167
Msa1038880 MtrunA17_Chr8g0373531 27.731 476 299 10 67 498 15 489 4.57e-44 162
Msa1038880 MtrunA17_Chr1g0205691 30.688 378 247 5 123 487 108 483 3.07e-43 160
Msa1038880 MtrunA17_Chr5g0394341 27.792 403 276 5 98 487 83 483 3.98e-43 160
Msa1038880 MtrunA17_Chr5g0420841 29.268 410 265 9 98 488 82 485 1.11e-41 155
Msa1038880 MtrunA17_Chr3g0119401 25.662 491 338 10 22 495 56 536 1.36e-41 156
Msa1038880 MtrunA17_Chr3g0085971 30.244 410 261 8 98 488 82 485 1.37e-41 155
Msa1038880 MtrunA17_Chr4g0048411 28.184 479 297 10 56 494 21 492 9.92e-40 150
Msa1038880 MtrunA17_Chr3g0078791 27.160 405 258 7 98 487 28 410 2.90e-39 147
Msa1038880 MtrunA17_Chr3g0115721 25.806 403 285 5 98 487 82 483 4.33e-39 148
Msa1038880 MtrunA17_Chr3g0128171 26.471 408 277 7 98 487 36 438 6.81e-39 147
Msa1038880 MtrunA17_Chr1g0205671 24.625 467 313 7 56 487 21 483 8.72e-39 147
Msa1038880 MtrunA17_Chr8g0390141 27.970 404 273 8 98 487 86 485 1.33e-38 147
Msa1038880 MtrunA17_Chr8g0390521 26.991 452 304 7 60 488 20 468 9.62e-38 144
Msa1038880 MtrunA17_Chr4g0065324 27.494 411 279 7 98 494 88 493 1.20e-37 144
Msa1038880 MtrunA17_Chr5g0417611 25.478 471 307 9 56 487 21 486 2.94e-37 143
Msa1038880 MtrunA17_Chr5g0403831 26.614 511 320 13 20 495 9 499 4.51e-37 143
Msa1038880 MtrunA17_Chr3g0128081 27.685 419 280 7 98 498 83 496 4.87e-37 143
Msa1038880 MtrunA17_Chr5g0437021 26.978 493 315 9 36 494 9 490 9.09e-37 142
Msa1038880 MtrunA17_Chr4g0048051 27.447 470 298 8 56 487 21 485 1.12e-36 142
Msa1038880 MtrunA17_Chr3g0078971 26.423 492 309 11 35 488 8 484 1.16e-36 142
Msa1038880 MtrunA17_Chr8g0390261 27.206 408 271 9 98 487 86 485 1.57e-36 141
Msa1038880 MtrunA17_Chr1g0164851 27.061 473 308 8 56 494 21 490 1.75e-36 141
Msa1038880 MtrunA17_Chr1g0164871 26.850 473 309 8 56 494 21 490 2.85e-36 140
Msa1038880 MtrunA17_Chr1g0205681 25.971 412 284 7 96 491 82 488 2.95e-36 140
Msa1038880 MtrunA17_Chr5g0404181 50.769 130 56 2 369 492 5 132 5.60e-36 130
Msa1038880 MtrunA17_Chr4g0065311 25.815 399 283 6 100 487 82 478 1.40e-35 138
Msa1038880 MtrunA17_Chr3g0115741 24.570 407 285 6 98 487 85 486 3.63e-35 137
Msa1038880 MtrunA17_Chr6g0486681 29.469 414 254 12 98 487 86 485 7.92e-35 136
Msa1038880 MtrunA17_Chr6g0486671 29.469 414 254 12 98 487 86 485 7.92e-35 136
Msa1038880 MtrunA17_Chr3g0121674 30.000 280 182 6 218 487 7 282 4.63e-34 130
Msa1038880 MtrunA17_Chr2g0303731 29.217 332 217 7 68 382 36 366 8.29e-34 134
Msa1038880 MtrunA17_Chr2g0303731 35.185 108 69 1 391 497 452 559 3.54e-13 72.0
Msa1038880 MtrunA17_Chr3g0115711 24.876 402 289 6 98 487 82 482 2.25e-33 132
Msa1038880 MtrunA17_Chr3g0115751 25.926 405 282 8 98 487 87 488 1.14e-32 130
Msa1038880 MtrunA17_Chr2g0290181 29.371 286 180 6 116 382 88 370 1.45e-32 130
Msa1038880 MtrunA17_Chr2g0290181 36.190 105 66 1 390 493 454 558 2.01e-13 72.8
Msa1038880 MtrunA17_Chr3g0115781 23.284 408 291 5 98 488 84 486 3.32e-32 129
Msa1038880 MtrunA17_Chr2g0303701 28.522 291 185 7 118 394 89 370 1.08e-31 128
Msa1038880 MtrunA17_Chr3g0078991 25.000 464 314 10 58 488 23 485 2.06e-31 127
Msa1038880 MtrunA17_Chr8g0376611 28.720 289 193 5 107 382 11 299 1.68e-30 124
Msa1038880 MtrunA17_Chr8g0376611 34.259 108 70 1 391 497 382 489 4.02e-13 71.6
Msa1038880 MtrunA17_Chr5g0445601 26.316 399 281 6 100 487 88 484 2.16e-30 124
Msa1038880 MtrunA17_Chr8g0376631 30.651 261 166 6 114 360 85 344 1.33e-29 122
Msa1038880 MtrunA17_Chr8g0376631 34.821 112 64 2 391 497 451 558 4.87e-13 71.6
Msa1038880 MtrunA17_Chr8g0376601 28.920 287 184 6 120 392 91 371 3.34e-29 120
Msa1038880 MtrunA17_Chr8g0376601 40.217 92 54 1 391 481 450 541 2.59e-12 69.3
Msa1038880 MtrunA17_Chr7g0257631 25.815 399 283 6 100 487 122 518 2.05e-28 118
Msa1038880 MtrunA17_Chr7g0221631 60.759 79 30 1 380 458 40 117 1.61e-27 106
Msa1038880 MtrunA17_Chr3g0115731 26.132 287 203 3 209 487 177 462 5.47e-26 110
Msa1038880 MtrunA17_Chr3g0144261 36.098 205 118 5 86 282 32 231 2.59e-23 103
Msa1038880 MtrunA17_Chr3g0144261 31.222 221 113 6 292 487 507 713 4.50e-18 87.4
Msa1038880 MtrunA17_Chr4g0065351 25.697 323 227 6 176 487 1 321 7.05e-23 100
Msa1038880 MtrunA17_Chr2g0290161 27.376 263 153 6 116 364 21 259 9.60e-23 101
Msa1038880 MtrunA17_Chr5g0419321 33.178 214 118 4 292 487 525 731 9.86e-23 102
Msa1038880 MtrunA17_Chr5g0419321 30.500 200 129 4 71 263 49 245 6.85e-19 90.1
Msa1038880 MtrunA17_Chr8g0370151 33.036 224 131 4 279 487 125 344 3.35e-22 98.2
Msa1038880 MtrunA17_Chr3g0146061 32.127 221 125 5 285 487 510 723 4.73e-22 100
Msa1038880 MtrunA17_Chr3g0146061 35.032 157 95 2 106 255 54 210 1.45e-16 82.8
Msa1038880 MtrunA17_Chr5g0407441 31.429 210 127 3 292 487 499 705 1.63e-20 95.1
Msa1038880 MtrunA17_Chr5g0407441 34.810 158 95 3 113 263 61 217 2.56e-17 85.1
Msa1038880 MtrunA17_Chr7g0259451 72.000 50 14 0 407 456 1 50 3.91e-19 80.9
Msa1038880 MtrunA17_Chr5g0434261 27.097 310 167 9 218 481 7 303 4.78e-18 85.1
Msa1038880 MtrunA17_Chr5g0434231 30.263 152 87 1 102 253 9 141 3.41e-15 73.2
Msa1038880 MtrunA17_Chr8g0370141 31.285 179 110 5 113 283 61 234 2.10e-14 75.1
Msa1038880 MtrunA17_Chr5g0434251 34.259 108 70 1 391 497 38 145 2.34e-13 67.8
Msa1038880 MtrunA17_Chr2g0319001 24.010 404 250 18 107 479 133 510 2.39e-13 72.4
Msa1038880 MtrunA17_Chr5g0446681 28.986 138 82 1 60 197 24 145 6.10e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038880 AT1G54730.2 66.370 449 151 0 44 492 18 466 0.0 599
Msa1038880 AT1G54730.5 62.138 449 149 1 44 492 18 445 0.0 548
Msa1038880 AT1G54730.3 65.385 416 144 0 44 459 18 433 0.0 544
Msa1038880 AT2G48020.2 54.110 438 201 0 55 492 25 462 2.43e-174 499
Msa1038880 AT2G48020.1 54.110 438 201 0 55 492 25 462 2.43e-174 499
Msa1038880 AT1G54730.4 60.817 416 142 1 44 459 18 412 4.94e-173 493
Msa1038880 AT5G18840.1 53.017 464 217 1 33 495 19 482 3.34e-171 491
Msa1038880 AT1G54730.9 64.644 379 134 0 44 422 18 396 5.57e-171 488
Msa1038880 AT1G54730.7 64.644 379 134 0 44 422 18 396 5.57e-171 488
Msa1038880 AT3G05150.1 49.359 468 232 2 29 491 2 469 2.59e-159 461
Msa1038880 AT3G05150.3 49.359 468 232 2 29 491 2 469 2.59e-159 461
Msa1038880 AT3G05150.2 49.359 468 232 2 29 491 2 469 4.28e-159 461
Msa1038880 AT3G05165.3 47.021 470 243 1 26 495 4 467 2.10e-156 453
Msa1038880 AT3G05165.2 47.021 470 243 1 26 495 4 467 2.10e-156 453
Msa1038880 AT3G05165.1 47.021 470 243 1 26 495 4 467 2.10e-156 453
Msa1038880 AT3G05160.1 46.526 475 237 2 21 495 1 458 1.55e-154 448
Msa1038880 AT1G08920.1 50.691 434 214 0 60 493 34 467 1.35e-153 446
Msa1038880 AT1G08930.1 48.966 435 222 0 60 494 60 494 1.36e-153 447
Msa1038880 AT1G08930.2 48.966 435 222 0 60 494 60 494 1.36e-153 447
Msa1038880 AT3G05155.1 50.223 448 219 2 46 492 15 459 5.56e-153 444
Msa1038880 AT3G05400.1 47.692 455 238 0 37 491 5 459 1.26e-152 443
Msa1038880 AT5G27360.1 50.231 432 215 0 60 491 37 468 1.34e-152 444
Msa1038880 AT5G27360.3 50.231 432 215 0 60 491 85 516 1.08e-151 443
Msa1038880 AT1G08920.2 49.660 441 215 1 60 493 34 474 2.75e-151 441
Msa1038880 AT1G54730.8 59.631 379 132 1 44 422 18 375 4.43e-151 437
Msa1038880 AT5G27350.1 49.446 451 227 1 41 491 15 464 6.26e-151 439
Msa1038880 AT3G05160.3 49.633 409 206 0 87 495 1 409 1.95e-147 428
Msa1038880 AT3G05160.2 49.633 409 206 0 87 495 1 409 1.95e-147 428
Msa1038880 AT4G04750.1 46.822 472 246 3 30 498 9 478 2.21e-145 426
Msa1038880 AT4G04750.2 46.822 472 246 3 30 498 9 478 2.21e-145 426
Msa1038880 AT4G04750.3 47.122 469 243 3 30 495 53 519 1.57e-144 425
Msa1038880 AT3G20460.1 47.955 440 227 1 55 492 48 487 4.95e-144 422
Msa1038880 AT1G54730.11 65.300 317 110 0 44 360 18 334 1.11e-143 416
Msa1038880 AT1G08890.1 49.667 451 224 3 42 491 12 460 1.25e-142 418
Msa1038880 AT4G04760.1 48.966 435 219 1 58 489 31 465 3.03e-142 417
Msa1038880 AT1G08900.1 46.795 468 238 2 24 491 2 458 5.30e-142 416
Msa1038880 AT1G08900.2 46.795 468 238 2 24 491 2 458 5.30e-142 416
Msa1038880 AT3G05165.6 46.083 434 228 1 26 459 4 431 6.57e-140 412
Msa1038880 AT3G05400.2 45.275 455 229 1 37 491 5 439 2.30e-139 409
Msa1038880 AT1G08920.3 49.874 397 199 0 60 456 34 430 1.58e-136 402
Msa1038880 AT1G08900.5 48.558 416 214 0 76 491 1 416 7.10e-136 399
Msa1038880 AT1G75220.1 48.276 435 214 3 63 489 53 484 3.79e-135 400
Msa1038880 AT1G08900.3 45.726 468 235 3 24 491 2 450 5.74e-135 398
Msa1038880 AT1G19450.1 45.788 463 231 4 37 489 33 485 1.33e-134 398
Msa1038880 AT4G04760.3 49.261 406 203 1 87 489 1 406 6.95e-134 394
Msa1038880 AT3G05165.4 45.261 422 225 1 26 447 4 419 1.80e-131 389
Msa1038880 AT3G05165.5 45.261 422 225 1 26 447 4 419 1.80e-131 389
Msa1038880 AT5G27360.2 50.275 364 181 0 128 491 1 364 4.56e-129 380
Msa1038880 AT5G27360.5 50.275 364 181 0 128 491 1 364 4.56e-129 380
Msa1038880 AT4G04760.2 46.453 437 224 3 58 489 31 462 1.54e-128 382
Msa1038880 AT1G54730.10 62.458 301 113 0 44 344 18 318 3.63e-128 376
Msa1038880 AT1G54730.6 62.458 301 113 0 44 344 18 318 3.63e-128 376
Msa1038880 AT1G08900.4 45.727 433 224 2 24 456 2 423 3.08e-126 375
Msa1038880 AT2G48020.4 51.453 344 167 0 55 398 25 368 4.49e-124 368
Msa1038880 AT5G27360.4 43.284 402 211 1 60 461 37 421 1.42e-114 345
Msa1038880 AT2G48020.3 52.117 307 147 0 55 361 25 331 2.66e-111 334
Msa1038880 AT3G05155.2 49.206 315 157 1 46 360 15 326 3.72e-102 310
Msa1038880 AT5G16150.2 32.515 489 302 10 20 495 73 546 3.24e-67 226
Msa1038880 AT5G16150.1 32.515 489 302 10 20 495 73 546 3.24e-67 226
Msa1038880 AT5G16150.3 32.515 489 302 10 20 495 73 546 3.24e-67 226
Msa1038880 AT2G20780.1 30.101 495 318 8 11 488 14 497 9.08e-63 213
Msa1038880 AT5G17010.1 31.400 500 304 12 21 490 11 501 4.47e-59 203
Msa1038880 AT5G17010.3 31.400 500 304 12 21 490 11 501 4.47e-59 203
Msa1038880 AT5G17010.4 31.400 500 304 12 21 490 11 501 4.47e-59 203
Msa1038880 AT2G20780.2 31.616 427 270 6 89 498 28 449 1.48e-57 198
Msa1038880 AT3G03090.1 32.460 496 286 15 29 489 19 500 1.54e-56 196
Msa1038880 AT2G43330.1 32.061 393 235 9 118 488 94 476 5.17e-54 189
Msa1038880 AT5G59250.1 30.228 483 295 9 45 491 80 556 2.47e-52 186
Msa1038880 AT2G16130.1 29.638 469 294 7 63 498 31 496 2.78e-50 179
Msa1038880 AT3G18830.1 28.884 457 292 8 63 488 41 495 4.57e-50 179
Msa1038880 AT1G67300.2 28.782 476 314 10 29 491 27 490 1.58e-49 177
Msa1038880 AT1G67300.1 28.661 478 311 11 29 491 27 489 2.36e-49 177
Msa1038880 AT1G67300.3 28.661 478 311 11 29 491 27 489 2.36e-49 177
Msa1038880 AT2G16120.1 28.782 476 296 8 63 498 31 503 6.20e-49 176
Msa1038880 AT1G79820.2 31.042 451 278 10 63 495 59 494 6.93e-46 167
Msa1038880 AT1G79820.1 31.042 451 278 10 63 495 59 494 6.93e-46 167
Msa1038880 AT4G36670.1 29.060 468 295 8 63 497 22 485 6.95e-45 164
Msa1038880 AT1G05030.1 27.991 443 302 7 64 495 85 521 6.39e-44 162
Msa1038880 AT2G18480.1 27.171 449 291 8 72 488 36 480 1.27e-43 161
Msa1038880 AT1G05030.2 28.784 403 272 6 102 495 73 469 1.94e-43 160
Msa1038880 AT1G11260.1 27.273 484 302 11 44 487 12 485 8.66e-43 159
Msa1038880 AT1G67300.6 28.132 423 275 10 29 437 27 434 1.03e-41 155
Msa1038880 AT1G67300.7 28.132 423 275 10 29 437 27 434 1.03e-41 155
Msa1038880 AT1G67300.4 28.329 413 267 10 29 427 27 424 1.48e-40 151
Msa1038880 AT1G67300.5 28.329 413 267 10 29 427 27 424 1.48e-40 151
Msa1038880 AT5G26340.1 28.713 404 269 5 99 487 85 484 1.54e-40 153
Msa1038880 AT5G26250.1 28.325 406 276 6 98 491 81 483 1.39e-39 150
Msa1038880 AT1G79820.4 30.946 391 242 8 63 438 59 436 3.85e-39 148
Msa1038880 AT4G21480.1 26.427 473 307 10 58 494 23 490 1.85e-37 144
Msa1038880 AT3G19940.1 26.238 404 281 6 98 487 85 485 1.32e-36 142
Msa1038880 AT5G23270.1 27.137 468 294 9 60 487 26 486 1.33e-36 142
Msa1038880 AT3G05960.1 27.094 406 281 6 98 491 80 482 2.11e-36 141
Msa1038880 AT1G50310.1 24.678 466 307 7 60 487 27 486 1.55e-35 139
Msa1038880 AT1G07340.1 28.218 404 272 8 98 487 82 481 1.15e-33 133
Msa1038880 AT3G19930.1 25.902 471 304 10 56 488 21 484 2.10e-33 133
Msa1038880 AT3G19930.2 25.902 471 304 10 56 488 21 484 2.10e-33 133
Msa1038880 AT5G17010.2 26.667 495 257 12 29 490 17 438 3.61e-33 131
Msa1038880 AT4G02050.2 26.033 484 306 12 40 487 17 484 5.10e-33 132
Msa1038880 AT4G02050.1 26.033 484 306 12 40 487 17 484 5.10e-33 132
Msa1038880 AT2G35740.1 30.903 288 173 8 102 367 73 356 9.85e-33 132
Msa1038880 AT2G35740.1 37.864 103 63 1 391 492 458 560 6.59e-14 74.7
Msa1038880 AT1G79820.3 29.018 448 243 12 63 495 59 446 6.03e-32 127
Msa1038880 AT1G77210.2 26.733 404 278 8 98 487 86 485 8.36e-32 128
Msa1038880 AT1G77210.1 26.733 404 278 8 98 487 86 485 8.36e-32 128
Msa1038880 AT1G34580.2 27.681 401 267 8 100 481 35 431 4.68e-31 125
Msa1038880 AT1G34580.1 27.273 407 273 8 100 487 85 487 8.05e-31 125
Msa1038880 AT1G30220.1 30.116 259 166 6 120 364 93 350 3.85e-30 124
Msa1038880 AT1G30220.1 37.963 108 66 1 391 497 455 562 2.90e-14 75.9
Msa1038880 AT4G16480.2 30.137 292 172 6 118 385 90 373 7.87e-30 123
Msa1038880 AT4G16480.2 36.893 103 64 1 391 492 459 561 6.72e-14 74.7
Msa1038880 AT4G16480.3 30.137 292 172 6 118 385 90 373 7.87e-30 123
Msa1038880 AT4G16480.3 36.893 103 64 1 391 492 459 561 6.72e-14 74.7
Msa1038880 AT4G16480.1 30.137 292 172 6 118 385 90 373 7.87e-30 123
Msa1038880 AT4G16480.1 36.893 103 64 1 391 492 459 561 6.72e-14 74.7
Msa1038880 AT5G61520.2 24.814 403 282 7 100 487 43 439 6.91e-28 116
Msa1038880 AT1G50310.2 25.298 336 227 5 170 487 14 343 8.09e-28 114
Msa1038880 AT5G61520.1 24.814 403 282 7 100 487 91 487 1.45e-27 116
Msa1038880 AT1G77210.3 27.596 337 218 9 169 487 8 336 1.45e-26 110
Msa1038880 AT3G51490.3 30.876 217 119 4 292 487 460 666 3.17e-22 100
Msa1038880 AT3G51490.3 33.333 165 102 3 106 263 4 167 4.18e-17 84.7
Msa1038880 AT3G51490.2 30.876 217 119 4 292 487 510 716 3.55e-22 100
Msa1038880 AT3G51490.2 33.333 165 102 3 106 263 54 217 4.95e-17 84.7
Msa1038880 AT4G35300.5 33.019 212 121 4 292 487 319 525 5.51e-22 99.8
Msa1038880 AT4G35300.9 33.019 212 121 4 292 487 506 712 1.11e-21 99.4
Msa1038880 AT4G35300.9 35.758 165 98 4 106 263 54 217 6.66e-18 87.4
Msa1038880 AT4G35300.2 33.019 212 121 4 292 487 506 712 1.11e-21 99.4
Msa1038880 AT4G35300.2 35.758 165 98 4 106 263 54 217 6.66e-18 87.4
Msa1038880 AT4G35300.3 33.019 212 121 4 292 487 506 712 1.11e-21 99.4
Msa1038880 AT4G35300.3 35.758 165 98 4 106 263 54 217 6.66e-18 87.4
Msa1038880 AT4G35300.4 33.019 212 121 4 292 487 516 722 1.20e-21 99.0
Msa1038880 AT4G35300.4 35.758 165 98 4 106 263 54 217 7.68e-18 87.4
Msa1038880 AT4G35300.8 33.019 212 121 4 292 487 516 722 1.20e-21 99.0
Msa1038880 AT4G35300.8 35.758 165 98 4 106 263 54 217 7.68e-18 87.4
Msa1038880 AT4G35300.6 33.019 212 121 4 292 487 516 722 1.20e-21 99.0
Msa1038880 AT4G35300.6 35.758 165 98 4 106 263 54 217 7.68e-18 87.4
Msa1038880 AT4G35300.11 33.019 212 121 4 292 487 516 722 1.20e-21 99.0
Msa1038880 AT4G35300.11 35.758 165 98 4 106 263 54 217 7.68e-18 87.4
Msa1038880 AT4G35300.1 33.019 212 121 4 292 487 516 722 1.20e-21 99.0
Msa1038880 AT4G35300.1 35.758 165 98 4 106 263 54 217 7.68e-18 87.4
Msa1038880 AT4G35300.10 33.019 212 121 4 292 487 516 722 1.20e-21 99.0
Msa1038880 AT4G35300.10 35.758 165 98 4 106 263 54 217 7.68e-18 87.4
Msa1038880 AT4G35300.7 33.019 212 121 4 292 487 516 722 1.20e-21 99.0
Msa1038880 AT4G35300.7 35.758 165 98 4 106 263 54 217 7.68e-18 87.4
Msa1038880 AT1G20840.2 32.075 212 136 3 59 263 5 215 9.41e-21 96.3
Msa1038880 AT1G20840.2 32.243 214 120 4 292 487 509 715 3.09e-19 91.7
Msa1038880 AT1G20840.1 32.075 212 136 3 59 263 5 215 9.41e-21 96.3
Msa1038880 AT1G20840.1 32.243 214 120 4 292 487 509 715 3.09e-19 91.7
Msa1038880 AT1G79820.5 28.011 357 186 11 151 495 87 384 2.25e-19 90.5
Msa1038880 AT3G51490.1 31.100 209 121 5 292 487 510 708 7.73e-19 90.5
Msa1038880 AT3G51490.1 33.333 165 102 3 106 263 54 217 4.19e-17 85.1
Msa1038880 AT1G54730.1 61.290 62 24 0 109 170 1 62 1.29e-17 77.4

Find 138 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACAGAAGCTAGCATTAT+TGG 0.138915 7_1:+75865314 Msa1038880:CDS
TGGTTAACTGGTTGTGTTCT+TGG 0.201533 7_1:+75866944 Msa1038880:CDS
TCGCAGCTATTCTGCATTTC+CGG 0.219947 7_1:+75863572 Msa1038880:CDS
GCTTGGTCAGGAACTTTCTT+TGG 0.221471 7_1:+75867378 Msa1038880:intron
ATATCCACTTGCACCAATTT+TGG 0.229667 7_1:+75862786 Msa1038880:five_prime_UTR
ATGTCATTAACTTATCTTAT+TGG 0.231801 7_1:+75864739 Msa1038880:CDS
ATTCGTGAATTGGCGGATTT+TGG 0.244475 7_1:+75864765 Msa1038880:CDS
TAGATTCCAATGACAACTTT+AGG 0.254435 7_1:+75865828 Msa1038880:intron
GAAGGAAGTCAGTCCTATTT+TGG 0.254766 7_1:+75866389 Msa1038880:CDS
GCTTAGTAACCTTGGTTAAC+TGG 0.280940 7_1:+75866932 Msa1038880:CDS
TGCAGACTGATTGTAAATAA+AGG 0.291409 7_1:+75867559 Msa1038880:three_prime_UTR
CTTATCTATGACAGGGTTAT+CGG 0.312591 7_1:+75865663 Msa1038880:intron
AGCCCTATCATTCTTCTTGC+AGG 0.314275 7_1:+75866060 Msa1038880:CDS
ACCAGCCACCTAGGAGAATC+TGG 0.321718 7_1:-75864932 None:intergenic
TATAGCAATGGTTGCTGTTA+AGG 0.322955 7_1:+75865699 Msa1038880:CDS
GCAGAACCCTTAACGTTAAT+AGG 0.326086 7_1:-75866904 None:intergenic
GATATTTCCTATTAACGTTA+AGG 0.338316 7_1:+75866897 Msa1038880:intron
TCTTCTTTACAGCGCCTTAG+AGG 0.344154 7_1:+75865121 Msa1038880:CDS
TAGGCATGGGAGCAATTCCC+TGG 0.346639 7_1:+75866754 Msa1038880:CDS
CCTAGGAGAATCTGGGATAA+AGG 0.348990 7_1:-75864924 None:intergenic
TCTGCAGTGGGAACTTGTTT+AGG 0.349129 7_1:+75866025 Msa1038880:CDS
CTACGGCTGCGCTGGCTGAC+TGG 0.355238 7_1:-75862728 None:intergenic
ACACCAACAAGCGCCAAAAT+AGG 0.356691 7_1:-75866402 None:intergenic
CATCAGCATTCTTCCCTCTA+AGG 0.356717 7_1:-75865135 None:intergenic
CTTCATTGAATTTGAATTCA+AGG 0.361984 7_1:-75867490 None:intergenic
CTCATGACTTGGAGTTCAAC+AGG 0.367309 7_1:+75866991 Msa1038880:CDS
AAATTAAAAGAGCTAGTAAA+TGG 0.372524 7_1:-75862864 None:intergenic
GAACCTGCAAGAAGAATGAT+AGG 0.373125 7_1:-75866063 None:intergenic
ATTATATACTCTGATTTCAT+TGG 0.373273 7_1:-75865170 None:intergenic
ATCTACACATTCGTTGAAAT+AGG 0.373493 7_1:+75867708 Msa1038880:three_prime_UTR
TTATTGGTGCATTCGTGAAT+TGG 0.377156 7_1:+75864755 Msa1038880:CDS
ATATTTCCTATTAACGTTAA+GGG 0.381371 7_1:+75866898 Msa1038880:CDS
TTATGCAGGACATACATAAA+TGG 0.381934 7_1:+75866367 Msa1038880:intron
TTGTTTGTGTTGTTGATGAT+TGG 0.388354 7_1:-75863027 None:intergenic
ATCGCATTCTACGGCTGCGC+TGG 0.407410 7_1:-75862736 None:intergenic
TACTTTGCTTAGGTAGGACT+TGG 0.410815 7_1:+75865452 Msa1038880:intron
GGGATTCACCGCAGTTCATC+AGG 0.417828 7_1:+75864569 Msa1038880:CDS
TTTGGCGCTTGTTGGTGTAC+TGG 0.422650 7_1:+75866407 Msa1038880:CDS
CAACAGTTTGGAGGGATTAA+CGG 0.422666 7_1:+75865488 Msa1038880:CDS
CTAGGAGAATCTGGGATAAA+GGG 0.424434 7_1:-75864923 None:intergenic
AAAACTCCTAAAGTTGTCAT+TGG 0.427438 7_1:-75865834 None:intergenic
GTTATTTCTGCTATATAAAC+CGG 0.437448 7_1:-75864528 None:intergenic
TGATCTTGTGCAGGCAAAGA+TGG 0.438959 7_1:+75865078 Msa1038880:intron
ATAACGCCAAAGAATCTTAG+AGG 0.443505 7_1:+75864546 Msa1038880:CDS
TAGCTTCTGTTTGTTGCTGA+AGG 0.445371 7_1:-75865304 None:intergenic
TTTGGATTCGCTGCCATATG+TGG 0.445434 7_1:+75867396 Msa1038880:CDS
TTCTTCTAGTGTACGCCCCT+TGG 0.449622 7_1:-75867457 None:intergenic
AGTGTACGCCCCTTGGTCTC+AGG 0.451408 7_1:-75867450 None:intergenic
ATGGTGGTGTTGACCAAAAT+TGG 0.452796 7_1:-75862799 None:intergenic
GTGGTAAGTGTGAGAGTAGG+AGG 0.461073 7_1:-75863080 None:intergenic
TTCGGTTCAATATTGACCAT+TGG 0.469336 7_1:+75863386 Msa1038880:CDS
TTGACCATTGGAGCAATGAT+TGG 0.470163 7_1:+75863398 Msa1038880:CDS
GTGGTATAGAAGAAGAAGAA+GGG 0.471125 7_1:-75863058 None:intergenic
CTTCAATAGAGTCGTTGAAA+AGG 0.471548 7_1:-75867893 None:intergenic
CCTCAATCTTACTGTTGCAC+AGG 0.472592 7_1:+75863266 Msa1038880:CDS
AATTCTATATTTATATCAGC+TGG 0.473324 7_1:+75865527 Msa1038880:CDS
CCCAGATTCTCCTAGGTGGC+TGG 0.473747 7_1:+75864931 Msa1038880:CDS
GTATTTGTTTAAAGGATGCT+TGG 0.474738 7_1:+75864350 Msa1038880:intron
CAACGTTACCTCGGAAAAGA+AGG 0.476596 7_1:-75862959 None:intergenic
GGCAAAGATGGGTCGCTTGA+AGG 0.478645 7_1:+75865090 Msa1038880:intron
AGCTTCTGTTTGTTGCTGAA+GGG 0.478927 7_1:-75865303 None:intergenic
GCAGACCTTTGCGATTGTAA+TGG 0.481664 7_1:-75863603 None:intergenic
ATTAACGTTAAGGGTTCTGC+TGG 0.481935 7_1:+75866907 Msa1038880:CDS
GAAAGCAGGAAAATTGCATT+AGG 0.484162 7_1:+75867615 Msa1038880:three_prime_UTR
GACAGCTAATGATCTGTTGT+GGG 0.484232 7_1:+75864716 Msa1038880:intron
GTTAATGGCCAGGTATATGT+TGG 0.484675 7_1:+75866720 Msa1038880:intron
TGCTGGAAGCTTAGTAACCT+TGG 0.485413 7_1:+75866924 Msa1038880:CDS
CCTTTATCCCAGATTCTCCT+AGG 0.486068 7_1:+75864924 Msa1038880:CDS
TTGATGATACTACAACAGTT+TGG 0.487126 7_1:+75865476 Msa1038880:CDS
AAAACTGGTTCCTGAGACCA+AGG 0.489516 7_1:+75867440 Msa1038880:CDS
GGCTGCGCTGGCTGACTGGA+TGG 0.494885 7_1:-75862724 None:intergenic
TCATGATTCTAGCTTGAGTA+GGG 0.497312 7_1:-75863239 None:intergenic
GATTGTAATGGCAAGCCATC+CGG 0.497527 7_1:-75863591 None:intergenic
AAACTTATTACCAGTAAAAG+TGG 0.501367 7_1:-75865882 None:intergenic
TAAAACAGTGAAGCCACATA+TGG 0.501577 7_1:-75867409 None:intergenic
ATGATTGGTGCCATTGTTAG+TGG 0.503985 7_1:+75863413 Msa1038880:CDS
TTTGTTTAAAGGATGCTTGG+TGG 0.520168 7_1:+75864353 Msa1038880:intron
ATGATACTACAACAGTTTGG+AGG 0.521727 7_1:+75865479 Msa1038880:CDS
AGCTATTCTGCATTTCCGGA+TGG 0.524694 7_1:+75863576 Msa1038880:CDS
GGATCTTACTCGCTAGGCAT+GGG 0.528311 7_1:+75866741 Msa1038880:CDS
GGTGGTATAGAAGAAGAAGA+AGG 0.533069 7_1:-75863059 None:intergenic
TATGTTGGATCTTACTCGCT+AGG 0.536109 7_1:+75866735 Msa1038880:CDS
CTCAGAAGTTGTACAAGACA+TGG 0.536926 7_1:-75864896 None:intergenic
TGATACTACAACAGTTTGGA+GGG 0.537332 7_1:+75865480 Msa1038880:CDS
ACAGGGTTATCGGAGAGTAT+TGG 0.538331 7_1:+75865673 Msa1038880:intron
TTGGTGCATTCGTGAATTGG+CGG 0.542017 7_1:+75864758 Msa1038880:CDS
CTGTTGGTAGGATGTGGAAT+TGG 0.542973 7_1:+75864391 Msa1038880:CDS
GATGCTTGGTGGCTTTGCAT+TGG 0.543544 7_1:+75864364 Msa1038880:CDS
TGTTATGCTGAGCAGGCCAT+GGG 0.544608 7_1:+75863545 Msa1038880:intron
AGGGTGGTAAGTGTGAGAGT+AGG 0.547066 7_1:-75863083 None:intergenic
GAATGCTGATGTTTATAAAG+AGG 0.549236 7_1:+75865147 Msa1038880:CDS
AATTGGCCTGCTATCTTATG+TGG 0.552218 7_1:+75864408 Msa1038880:CDS
TGGATCTTACTCGCTAGGCA+TGG 0.552527 7_1:+75866740 Msa1038880:CDS
TGGTATAGAAGAAGAAGAAG+GGG 0.560815 7_1:-75863057 None:intergenic
CCAGCCACCTAGGAGAATCT+GGG 0.560891 7_1:-75864931 None:intergenic
GGCACCAATCATTGCTCCAA+TGG 0.561415 7_1:-75863402 None:intergenic
GAATATTGAAAATAAATGAA+TGG 0.563471 7_1:-75862818 None:intergenic
AAATTACCACATAAGATAGC+AGG 0.564200 7_1:-75864414 None:intergenic
TGCTATTGTACCACTAACAA+TGG 0.570005 7_1:-75863423 None:intergenic
TGACAGCTAATGATCTGTTG+TGG 0.570658 7_1:+75864715 Msa1038880:intron
AACGTTACCTCGGAAAAGAA+GGG 0.571533 7_1:-75862958 None:intergenic
TACTTAACAGTTGTCTGCAG+TGG 0.572600 7_1:+75866012 Msa1038880:intron
TTGACCAAAATTGGTGCAAG+TGG 0.572886 7_1:-75862790 None:intergenic
GCTTTGCATTGGAAGACTGT+TGG 0.574227 7_1:+75864375 Msa1038880:CDS
CTTCTTTACAGCGCCTTAGA+GGG 0.575020 7_1:+75865122 Msa1038880:CDS
ATCATGATTCTAGCTTGAGT+AGG 0.576117 7_1:-75863240 None:intergenic
TAACGCCAAAGAATCTTAGA+GGG 0.580791 7_1:+75864547 Msa1038880:CDS
ACATTGCATATCGCATTCTA+CGG 0.584991 7_1:-75862745 None:intergenic
TACCTCAGACATTATAACCC+AGG 0.595151 7_1:-75866772 None:intergenic
CAACAACTCACCAGCCACCT+AGG 0.599750 7_1:-75864941 None:intergenic
GATCTTGTGCAGGCAAAGAT+GGG 0.601236 7_1:+75865079 Msa1038880:intron
AAACAAATCAGTAATCATCA+TGG 0.603430 7_1:+75862899 Msa1038880:exon
GGAAGACTGTTGGTAGGATG+TGG 0.603779 7_1:+75864385 Msa1038880:CDS
ACTTAACAGTTGTCTGCAGT+GGG 0.610138 7_1:+75866013 Msa1038880:intron
GCAGGACATACATAAATGGA+AGG 0.614430 7_1:+75866371 Msa1038880:intron
ACCTCAGACATTATAACCCA+GGG 0.614558 7_1:-75866771 None:intergenic
ATTGTGATTCAACGTTACCT+CGG 0.621262 7_1:-75862968 None:intergenic
TGCATTGGAAGACTGTTGGT+AGG 0.633998 7_1:+75864379 Msa1038880:CDS
TTATCCCAGATTCTCCTAGG+TGG 0.635109 7_1:+75864927 Msa1038880:CDS
GAATAGCTGCGAGAATCCCA+TGG 0.635839 7_1:-75863561 None:intergenic
ACGTTACCTCGGAAAAGAAG+GGG 0.637788 7_1:-75862957 None:intergenic
GTAAGTGTGAGAGTAGGAGG+TGG 0.640892 7_1:-75863077 None:intergenic
AGGCATGGGAGCAATTCCCT+GGG 0.644562 7_1:+75866755 Msa1038880:CDS
GAGTATTGGAACTATAGCAA+TGG 0.647929 7_1:+75865687 Msa1038880:CDS
TCCCTGGGTTATAATGTCTG+AGG 0.650945 7_1:+75866770 Msa1038880:CDS
TATTGAAAATAAATGAATGG+TGG 0.651906 7_1:-75862815 None:intergenic
GCTTGCCATTACAATCGCAA+AGG 0.653984 7_1:+75863598 Msa1038880:CDS
AACTGGTTCCTGAGACCAAG+GGG 0.654505 7_1:+75867442 Msa1038880:CDS
CCTGTGCAACAGTAAGATTG+AGG 0.658261 7_1:-75863266 None:intergenic
CATGATTCTAGCTTGAGTAG+GGG 0.669832 7_1:-75863238 None:intergenic
AACGCCAAAGAATCTTAGAG+GGG 0.669984 7_1:+75864548 Msa1038880:CDS
ACGCCAAAGAATCTTAGAGG+GGG 0.670184 7_1:+75864549 Msa1038880:CDS
AAACTGGTTCCTGAGACCAA+GGG 0.675734 7_1:+75867441 Msa1038880:CDS
AACCTGCAAGAAGAATGATA+GGG 0.679626 7_1:-75866062 None:intergenic
AGAACACAACCAGTTAACCA+AGG 0.702029 7_1:-75866941 None:intergenic
AGAAGAATGATAGGGCTGCG+AGG 0.713518 7_1:-75866054 None:intergenic
GGTACAATAGCAGATTACGC+TGG 0.729619 7_1:+75863434 Msa1038880:CDS
TTGCTTCACCTGATGAACTG+CGG 0.737737 7_1:-75864577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATCAATACATATATTT+AGG - chr7_1:75867134-75867153 None:intergenic 10.0%
!! GAATATTGAAAATAAATGAA+TGG - chr7_1:75862821-75862840 None:intergenic 15.0%
!!! TTTATGTAGTTTTCAATTTT+CGG + chr7_1:75863368-75863387 Msa1038880:intron 15.0%
!!! TTTTTCAGCTTAATTAAATT+TGG + chr7_1:75863514-75863533 Msa1038880:intron 15.0%
!! TTTATATTAATTCCAAGAAA+TGG + chr7_1:75863837-75863856 Msa1038880:intron 15.0%
!! TTATATTAATTCCAAGAAAT+GGG + chr7_1:75863838-75863857 Msa1038880:intron 15.0%
!! TACTTTAAATAGTTAATAGT+TGG - chr7_1:75863881-75863900 None:intergenic 15.0%
!! AATATTCATTTGTATTCTTT+CGG - chr7_1:75864489-75864508 None:intergenic 15.0%
!!! ATTAATTAGAGCATATATTT+TGG - chr7_1:75866097-75866116 None:intergenic 15.0%
!! AATTACATTTATTTGTCAAT+AGG - chr7_1:75866686-75866705 None:intergenic 15.0%
!! ACATATAAAAGAAATGAAAT+TGG + chr7_1:75867343-75867362 Msa1038880:intron 15.0%
!!! AGATTTACACTTTTTTTTTT+TGG + chr7_1:75867675-75867694 Msa1038880:three_prime_UTR 15.0%
!! TATTGAAAATAAATGAATGG+TGG - chr7_1:75862818-75862837 None:intergenic 20.0%
!! AAATTAAAAGAGCTAGTAAA+TGG - chr7_1:75862867-75862886 None:intergenic 20.0%
!! AAGTTAAGTTAGAAAGAAAA+TGG - chr7_1:75863158-75863177 None:intergenic 20.0%
!! AAAAGTAGAAATGAAAAGAA+AGG - chr7_1:75863311-75863330 None:intergenic 20.0%
!! TATATTAATTCCAAGAAATG+GGG + chr7_1:75863839-75863858 Msa1038880:intron 20.0%
!!! TTCACTCTTTTTTTTTTTTG+TGG + chr7_1:75864624-75864643 Msa1038880:intron 20.0%
!! ATGTCATTAACTTATCTTAT+TGG + chr7_1:75864739-75864758 Msa1038880:CDS 20.0%
!! ATTATATACTCTGATTTCAT+TGG - chr7_1:75865173-75865192 None:intergenic 20.0%
!!! TGAATCATACTTTTATTTGT+AGG + chr7_1:75865268-75865287 Msa1038880:intron 20.0%
!! AATTCTATATTTATATCAGC+TGG + chr7_1:75865527-75865546 Msa1038880:CDS 20.0%
!! ATTATATGACAAAGAAAAGA+AGG + chr7_1:75865586-75865605 Msa1038880:intron 20.0%
!! AAAATTTCTTATCTATGACA+GGG + chr7_1:75865656-75865675 Msa1038880:intron 20.0%
!! AATTGTTTGAAGAGAATTAA+GGG - chr7_1:75865792-75865811 None:intergenic 20.0%
!! AAATTGTTTGAAGAGAATTA+AGG - chr7_1:75865793-75865812 None:intergenic 20.0%
!!! TGTTAAGTAGTCAAAATTTT+GGG - chr7_1:75866001-75866020 None:intergenic 20.0%
!! TTTCAAATGAATTACTAGTA+AGG + chr7_1:75866120-75866139 Msa1038880:intron 20.0%
!!! AATCTCATAAATTTTAAGTC+CGG + chr7_1:75866482-75866501 Msa1038880:intron 20.0%
!!! TTGCCTTTTAATTTTGTTAA+TGG + chr7_1:75866705-75866724 Msa1038880:intron 20.0%
!!! ATATAAATTTTAACGAGTTC+CGG - chr7_1:75866814-75866833 None:intergenic 20.0%
!! ATATTTCCTATTAACGTTAA+GGG + chr7_1:75866898-75866917 Msa1038880:CDS 20.0%
!!! AATTTAACCTTTTTATTGTG+TGG + chr7_1:75867319-75867338 Msa1038880:intron 20.0%
!!! TGTTTTTCTGGAATTTTATT+TGG + chr7_1:75867756-75867775 Msa1038880:three_prime_UTR 20.0%
! AAACAAATCAGTAATCATCA+TGG + chr7_1:75862899-75862918 Msa1038880:exon 25.0%
! AGGTCATAACATAAAACTAT+CGG - chr7_1:75863659-75863678 None:intergenic 25.0%
!!! AATTAACTAGTCTTTTAGGT+TGG - chr7_1:75863698-75863717 None:intergenic 25.0%
!! ACCTAAAAGACTAGTTAATT+AGG + chr7_1:75863698-75863717 Msa1038880:intron 25.0%
!!! ACCTAATTAACTAGTCTTTT+AGG - chr7_1:75863702-75863721 None:intergenic 25.0%
! ATACATAAGAAAGCTTAATG+TGG - chr7_1:75863748-75863767 None:intergenic 25.0%
!!! TATTGGTTTCAGAATGTTTT+AGG - chr7_1:75864220-75864239 None:intergenic 25.0%
! ATAAAGTTGGCTACAAAATA+TGG + chr7_1:75864241-75864260 Msa1038880:intron 25.0%
! ATACAAATGAATATTTCCCT+TGG + chr7_1:75864494-75864513 Msa1038880:intron 25.0%
!!! GTTATTTCTGCTATATAAAC+CGG - chr7_1:75864531-75864550 None:intergenic 25.0%
!! AATATTCAGTTACTTTGCTT+AGG + chr7_1:75865442-75865461 Msa1038880:intron 25.0%
! CAAAATTTCTTATCTATGAC+AGG + chr7_1:75865655-75865674 Msa1038880:intron 25.0%
!!! AACTTTAGGAGTTTTTTTGA+TGG + chr7_1:75865842-75865861 Msa1038880:CDS 25.0%
!!! GTTTTTTTGATGGATAAATC+TGG + chr7_1:75865852-75865871 Msa1038880:CDS 25.0%
! AAACTTATTACCAGTAAAAG+TGG - chr7_1:75865885-75865904 None:intergenic 25.0%
!! CTGTTAAGTAGTCAAAATTT+TGG - chr7_1:75866002-75866021 None:intergenic 25.0%
!! ACTTATTTGAGATTATCCAT+TGG + chr7_1:75866157-75866176 Msa1038880:intron 25.0%
!! TTTACTCCATTATTTAGAAC+CGG - chr7_1:75866504-75866523 None:intergenic 25.0%
! GTCATAAAAATGATTTAAGC+TGG + chr7_1:75866658-75866677 Msa1038880:intron 25.0%
! TGGCCATTAACAAAATTAAA+AGG - chr7_1:75866711-75866730 None:intergenic 25.0%
!!! TTTTAATTTTGTTAATGGCC+AGG + chr7_1:75866710-75866729 Msa1038880:intron 25.0%
! GATATTTCCTATTAACGTTA+AGG + chr7_1:75866897-75866916 Msa1038880:intron 25.0%
!! CTTTTAATCTTCATATTCCT+CGG + chr7_1:75867022-75867041 Msa1038880:intron 25.0%
!! CCTTATGCTTTATCTTTTTA+GGG - chr7_1:75867071-75867090 None:intergenic 25.0%
!! ACCTTATGCTTTATCTTTTT+AGG - chr7_1:75867072-75867091 None:intergenic 25.0%
! ATATGTACCACACAATAAAA+AGG - chr7_1:75867329-75867348 None:intergenic 25.0%
! ATTGGTTATTATGTTATGCT+TGG + chr7_1:75867361-75867380 Msa1038880:intron 25.0%
! CTTCATTGAATTTGAATTCA+AGG - chr7_1:75867493-75867512 None:intergenic 25.0%
!!! ATTTTTGGAAGCTTCTTAAT+GGG - chr7_1:75867539-75867558 None:intergenic 25.0%
!!! AATTTTTGGAAGCTTCTTAA+TGG - chr7_1:75867540-75867559 None:intergenic 25.0%
!!! AAAACAACTGATGATGTTTT+TGG - chr7_1:75867742-75867761 None:intergenic 25.0%
!!! TGGAATTTTATTTGGAGTAA+CGG + chr7_1:75867764-75867783 Msa1038880:three_prime_UTR 25.0%
!! TTGTTTGTGTTGTTGATGAT+TGG - chr7_1:75863030-75863049 None:intergenic 30.0%
!!! GTTTTTGGTTCTTACGTTTT+TGG + chr7_1:75863113-75863132 Msa1038880:CDS 30.0%
! AAGAGTGAGTTATGATAATG+TGG - chr7_1:75863343-75863362 None:intergenic 30.0%
GGTCATAACATAAAACTATC+GGG - chr7_1:75863658-75863677 None:intergenic 30.0%
TGTATAACAACAAATCTCAG+GGG - chr7_1:75863942-75863961 None:intergenic 30.0%
GTGTATAACAACAAATCTCA+GGG - chr7_1:75863943-75863962 None:intergenic 30.0%
TGTGTATAACAACAAATCTC+AGG - chr7_1:75863944-75863963 None:intergenic 30.0%
!!! CACACACATACTCTATTTTT+TGG + chr7_1:75863960-75863979 Msa1038880:intron 30.0%
! TGCCATTTAAACAGAACTAA+GGG - chr7_1:75864027-75864046 None:intergenic 30.0%
GATCAACAACAAAGCTTATT+TGG + chr7_1:75864132-75864151 Msa1038880:intron 30.0%
CTGAAACCAATAGATAAAGT+TGG + chr7_1:75864228-75864247 Msa1038880:intron 30.0%
TTGTAGCCAACTTTATCTAT+TGG - chr7_1:75864237-75864256 None:intergenic 30.0%
CTTTAAACAAATACCACCAA+AGG - chr7_1:75864344-75864363 None:intergenic 30.0%
! CTTTGGTGGTATTTGTTTAA+AGG + chr7_1:75864342-75864361 Msa1038880:intron 30.0%
GTATTTGTTTAAAGGATGCT+TGG + chr7_1:75864350-75864369 Msa1038880:intron 30.0%
AAATTACCACATAAGATAGC+AGG - chr7_1:75864417-75864436 None:intergenic 30.0%
! AATATTTCCCTTGGTGTAAT+AGG + chr7_1:75864503-75864522 Msa1038880:intron 30.0%
GCACATATCAAATCTCTATT+TGG + chr7_1:75864684-75864703 Msa1038880:intron 30.0%
!! ATCGTTTTTGTCTTTATCTC+AGG + chr7_1:75864866-75864885 Msa1038880:intron 30.0%
AAAACTTTAGTTGCTTGTGT+AGG - chr7_1:75865005-75865024 None:intergenic 30.0%
GAATGCTGATGTTTATAAAG+AGG + chr7_1:75865147-75865166 Msa1038880:CDS 30.0%
ATGCTACTCTTGTGTTAAAA+AGG + chr7_1:75865211-75865230 Msa1038880:intron 30.0%
TACTCTTGTGTTAAAAAGGA+AGG + chr7_1:75865215-75865234 Msa1038880:intron 30.0%
! TTGATGATACTACAACAGTT+TGG + chr7_1:75865476-75865495 Msa1038880:CDS 30.0%
TCATCGTCTTATGCAAAATT+AGG - chr7_1:75865764-75865783 None:intergenic 30.0%
TAGATTCCAATGACAACTTT+AGG + chr7_1:75865828-75865847 Msa1038880:intron 30.0%
AAAACTCCTAAAGTTGTCAT+TGG - chr7_1:75865837-75865856 None:intergenic 30.0%
TAAAACGCAGCAAAATAAGA+AGG - chr7_1:75865919-75865938 None:intergenic 30.0%
TAGTTACACTTATCTTATGC+AGG + chr7_1:75866353-75866372 Msa1038880:intron 30.0%
TTATGCAGGACATACATAAA+TGG + chr7_1:75866367-75866386 Msa1038880:intron 30.0%
!! TTAAGTCCGGTTCTAAATAA+TGG + chr7_1:75866495-75866514 Msa1038880:intron 30.0%
TGAAAGAATCAAAGAGAACA+AGG - chr7_1:75866617-75866636 None:intergenic 30.0%
TGTTCTCTTTGATTCTTTCA+CGG + chr7_1:75866617-75866636 Msa1038880:intron 30.0%
TATGACATGACGAAAATACA+AGG - chr7_1:75866644-75866663 None:intergenic 30.0%
!!! CTTTTAACTTTCTCATGACT+TGG + chr7_1:75866980-75866999 Msa1038880:CDS 30.0%
!! TTTTTAGGGAATGAATGAGT+AGG - chr7_1:75867057-75867076 None:intergenic 30.0%
CCCTAAAAAGATAAAGCATA+AGG + chr7_1:75867068-75867087 Msa1038880:intron 30.0%
AGAATTTAATTACCGTGCAA+TGG - chr7_1:75867184-75867203 None:intergenic 30.0%
TTATTATGTTATGCTTGGTC+AGG + chr7_1:75867366-75867385 Msa1038880:intron 30.0%
!! TGTTTTATTCGTAGCAAAAC+TGG + chr7_1:75867425-75867444 Msa1038880:CDS 30.0%
! TACAATCAGTCTGCAATTTT+TGG - chr7_1:75867554-75867573 None:intergenic 30.0%
TGCAGACTGATTGTAAATAA+AGG + chr7_1:75867559-75867578 Msa1038880:three_prime_UTR 30.0%
ATCATTGCCCATAAAAAGAT+GGG + chr7_1:75867593-75867612 Msa1038880:three_prime_UTR 30.0%
ATCTACACATTCGTTGAAAT+AGG + chr7_1:75867708-75867727 Msa1038880:three_prime_UTR 30.0%
!!! AACATCATCAGTTGTTTTTC+TGG + chr7_1:75867744-75867763 Msa1038880:three_prime_UTR 30.0%
!! GGAATTTTATTTGGAGTAAC+GGG + chr7_1:75867765-75867784 Msa1038880:three_prime_UTR 30.0%
ACATTGCATATCGCATTCTA+CGG - chr7_1:75862748-75862767 None:intergenic 35.0%
! ATATCCACTTGCACCAATTT+TGG + chr7_1:75862786-75862805 Msa1038880:five_prime_UTR 35.0%
ATTGTGATTCAACGTTACCT+CGG - chr7_1:75862971-75862990 None:intergenic 35.0%
TGGTATAGAAGAAGAAGAAG+GGG - chr7_1:75863060-75863079 None:intergenic 35.0%
GTGGTATAGAAGAAGAAGAA+GGG - chr7_1:75863061-75863080 None:intergenic 35.0%
! TCATCGCTCATTTTACAGAT+CGG + chr7_1:75863207-75863226 Msa1038880:intron 35.0%
!! TCATGATTCTAGCTTGAGTA+GGG - chr7_1:75863242-75863261 None:intergenic 35.0%
!! ATCATGATTCTAGCTTGAGT+AGG - chr7_1:75863243-75863262 None:intergenic 35.0%
TTCGGTTCAATATTGACCAT+TGG + chr7_1:75863386-75863405 Msa1038880:CDS 35.0%
TGCTATTGTACCACTAACAA+TGG - chr7_1:75863426-75863445 None:intergenic 35.0%
ATCGGGATTTGTGGATAAAA+TGG - chr7_1:75863641-75863660 None:intergenic 35.0%
CATAAAACTATCGGGATTTG+TGG - chr7_1:75863650-75863669 None:intergenic 35.0%
TAATTCCAAGAAATGGGGAA+AGG + chr7_1:75863844-75863863 Msa1038880:intron 35.0%
TAAATCCTTTCCCCATTTCT+TGG - chr7_1:75863852-75863871 None:intergenic 35.0%
TTTAAACAGAACTAAGGGGA+GGG - chr7_1:75864022-75864041 None:intergenic 35.0%
ATTTAAACAGAACTAAGGGG+AGG - chr7_1:75864023-75864042 None:intergenic 35.0%
!! TCCCCTTAGTTCTGTTTAAA+TGG + chr7_1:75864022-75864041 Msa1038880:intron 35.0%
GCCATTTAAACAGAACTAAG+GGG - chr7_1:75864026-75864045 None:intergenic 35.0%
!! GTGCCATTTAAACAGAACTA+AGG - chr7_1:75864028-75864047 None:intergenic 35.0%
!! ATAAGCTTTGTTGTTGATCG+AGG - chr7_1:75864131-75864150 None:intergenic 35.0%
GCTGATATCTATCTAACCTT+TGG + chr7_1:75864325-75864344 Msa1038880:intron 35.0%
GATATCTATCTAACCTTTGG+TGG + chr7_1:75864328-75864347 Msa1038880:intron 35.0%
TTTGTTTAAAGGATGCTTGG+TGG + chr7_1:75864353-75864372 Msa1038880:intron 35.0%
ATAACGCCAAAGAATCTTAG+AGG + chr7_1:75864546-75864565 Msa1038880:CDS 35.0%
TAACGCCAAAGAATCTTAGA+GGG + chr7_1:75864547-75864566 Msa1038880:CDS 35.0%
TATGTCGTCATATCACTTGT+AGG + chr7_1:75864662-75864681 Msa1038880:intron 35.0%
TTATTGGTGCATTCGTGAAT+TGG + chr7_1:75864755-75864774 Msa1038880:CDS 35.0%
ATAGGTAACATTCTTCTTCC+TGG + chr7_1:75864793-75864812 Msa1038880:intron 35.0%
! TGTTTTGTGAAAAGAACACC+AGG - chr7_1:75864814-75864833 None:intergenic 35.0%
!! TTGTTGACGAGTTGATTGTT+TGG + chr7_1:75864958-75864977 Msa1038880:intron 35.0%
!! TGTTGACGAGTTGATTGTTT+GGG + chr7_1:75864959-75864978 Msa1038880:intron 35.0%
TTGTTTGGGGATATATGTGT+TGG + chr7_1:75864973-75864992 Msa1038880:intron 35.0%
CAAACAGAAGCTAGCATTAT+TGG + chr7_1:75865314-75865333 Msa1038880:CDS 35.0%
CTGCATGAATAGGACTAATT+CGG - chr7_1:75865383-75865402 None:intergenic 35.0%
AGAAGATATGCTGCATGAAT+AGG - chr7_1:75865393-75865412 None:intergenic 35.0%
! TTCAGTTACTTTGCTTAGGT+AGG + chr7_1:75865446-75865465 Msa1038880:intron 35.0%
ATGATACTACAACAGTTTGG+AGG + chr7_1:75865479-75865498 Msa1038880:CDS 35.0%
TGATACTACAACAGTTTGGA+GGG + chr7_1:75865480-75865499 Msa1038880:CDS 35.0%
CTTATCTATGACAGGGTTAT+CGG + chr7_1:75865663-75865682 Msa1038880:intron 35.0%
!! GAGTATTGGAACTATAGCAA+TGG + chr7_1:75865687-75865706 Msa1038880:CDS 35.0%
! TATAGCAATGGTTGCTGTTA+AGG + chr7_1:75865699-75865718 Msa1038880:CDS 35.0%
!!! CTTATTTTGCTGCGTTTTAC+TGG + chr7_1:75865920-75865939 Msa1038880:intron 35.0%
CAAAACGCAGCAAAATAAGA+AGG - chr7_1:75865967-75865986 None:intergenic 35.0%
AACCTGCAAGAAGAATGATA+GGG - chr7_1:75866065-75866084 None:intergenic 35.0%
! ATGTTTTCATAAGCTGTCGT+AGG - chr7_1:75866226-75866245 None:intergenic 35.0%
TCCCCATATACGTTGAATTT+CGG + chr7_1:75866447-75866466 Msa1038880:intron 35.0%
TCCGAAATTCAACGTATATG+GGG - chr7_1:75866451-75866470 None:intergenic 35.0%
GTCCGAAATTCAACGTATAT+GGG - chr7_1:75866452-75866471 None:intergenic 35.0%
AGTCCGAAATTCAACGTATA+TGG - chr7_1:75866453-75866472 None:intergenic 35.0%
GTTCTCTTTGATTCTTTCAC+GGG + chr7_1:75866618-75866637 Msa1038880:intron 35.0%
AGTAAGATCCAACATATACC+TGG - chr7_1:75866731-75866750 None:intergenic 35.0%
GTAGCTTCATCTTAATATGC+CGG + chr7_1:75866792-75866811 Msa1038880:intron 35.0%
CCATTTATCATATCATGCTG+AGG - chr7_1:75866860-75866879 None:intergenic 35.0%
CCTCAGCATGATATGATAAA+TGG + chr7_1:75866857-75866876 Msa1038880:intron 35.0%
TAAAACAGTGAAGCCACATA+TGG - chr7_1:75867412-75867431 None:intergenic 35.0%
!! CTTAATGGGTGTTTTGTACA+AGG - chr7_1:75867525-75867544 None:intergenic 35.0%
CATCATTGCCCATAAAAAGA+TGG + chr7_1:75867592-75867611 Msa1038880:three_prime_UTR 35.0%
! CTGCTTTCCCATCTTTTTAT+GGG - chr7_1:75867603-75867622 None:intergenic 35.0%
GAAAGCAGGAAAATTGCATT+AGG + chr7_1:75867615-75867634 Msa1038880:three_prime_UTR 35.0%
CTTCAATAGAGTCGTTGAAA+AGG - chr7_1:75867896-75867915 None:intergenic 35.0%
TTGACCAAAATTGGTGCAAG+TGG - chr7_1:75862793-75862812 None:intergenic 40.0%
!! ATGGTGGTGTTGACCAAAAT+TGG - chr7_1:75862802-75862821 None:intergenic 40.0%
AACGTTACCTCGGAAAAGAA+GGG - chr7_1:75862961-75862980 None:intergenic 40.0%
GGTGGTATAGAAGAAGAAGA+AGG - chr7_1:75863062-75863081 None:intergenic 40.0%
AGAACCAAAAACAGCGACAA+GGG - chr7_1:75863105-75863124 None:intergenic 40.0%
AAGAACCAAAAACAGCGACA+AGG - chr7_1:75863106-75863125 None:intergenic 40.0%
!! CATGATTCTAGCTTGAGTAG+GGG - chr7_1:75863241-75863260 None:intergenic 40.0%
TTGACCATTGGAGCAATGAT+TGG + chr7_1:75863398-75863417 Msa1038880:CDS 40.0%
!! ATGATTGGTGCCATTGTTAG+TGG + chr7_1:75863413-75863432 Msa1038880:CDS 40.0%
! CATTTTGTGTTATGCTGAGC+AGG + chr7_1:75863538-75863557 Msa1038880:intron 40.0%
ATGTTATGACCTACGCCATA+AGG + chr7_1:75863667-75863686 Msa1038880:intron 40.0%
!! TTTAGGTTGGACTCTCCTTA+TGG - chr7_1:75863685-75863704 None:intergenic 40.0%
TTAAACAGAACTAAGGGGAG+GGG - chr7_1:75864021-75864040 None:intergenic 40.0%
CCTCAATTACACTCAGTGAA+GGG - chr7_1:75864050-75864069 None:intergenic 40.0%
CCTTCACTGAGTGTAATTGA+GGG + chr7_1:75864048-75864067 Msa1038880:intron 40.0%
CTTCACTGAGTGTAATTGAG+GGG + chr7_1:75864049-75864068 Msa1038880:intron 40.0%
! AATTGGCCTGCTATCTTATG+TGG + chr7_1:75864408-75864427 Msa1038880:CDS 40.0%
AACGCCAAAGAATCTTAGAG+GGG + chr7_1:75864548-75864567 Msa1038880:CDS 40.0%
!! AATCCCCCTCTAAGATTCTT+TGG - chr7_1:75864555-75864574 None:intergenic 40.0%
TGACAGCTAATGATCTGTTG+TGG + chr7_1:75864715-75864734 Msa1038880:intron 40.0%
GACAGCTAATGATCTGTTGT+GGG + chr7_1:75864716-75864735 Msa1038880:intron 40.0%
!!! ATTCGTGAATTGGCGGATTT+TGG + chr7_1:75864765-75864784 Msa1038880:CDS 40.0%
!!! TGGCGGATTTTGGCTATAAT+AGG + chr7_1:75864775-75864794 Msa1038880:CDS 40.0%
CTCAGAAGTTGTACAAGACA+TGG - chr7_1:75864899-75864918 None:intergenic 40.0%
! CTAGGAGAATCTGGGATAAA+GGG - chr7_1:75864926-75864945 None:intergenic 40.0%
!! GTTGACGAGTTGATTGTTTG+GGG + chr7_1:75864960-75864979 Msa1038880:intron 40.0%
TGATACTTGTGATCTTGTGC+AGG + chr7_1:75865069-75865088 Msa1038880:intron 40.0%
! AGCTTCTGTTTGTTGCTGAA+GGG - chr7_1:75865306-75865325 None:intergenic 40.0%
! TAGCTTCTGTTTGTTGCTGA+AGG - chr7_1:75865307-75865326 None:intergenic 40.0%
TACTTTGCTTAGGTAGGACT+TGG + chr7_1:75865452-75865471 Msa1038880:intron 40.0%
CAACAGTTTGGAGGGATTAA+CGG + chr7_1:75865488-75865507 Msa1038880:CDS 40.0%
TACTTAACAGTTGTCTGCAG+TGG + chr7_1:75866012-75866031 Msa1038880:intron 40.0%
ACTTAACAGTTGTCTGCAGT+GGG + chr7_1:75866013-75866032 Msa1038880:intron 40.0%
GAACCTGCAAGAAGAATGAT+AGG - chr7_1:75866066-75866085 None:intergenic 40.0%
AAGTACTTGCGAGACTGTTA+TGG + chr7_1:75866183-75866202 Msa1038880:intron 40.0%
GCAGGACATACATAAATGGA+AGG + chr7_1:75866371-75866390 Msa1038880:intron 40.0%
! GAAGGAAGTCAGTCCTATTT+TGG + chr7_1:75866389-75866408 Msa1038880:CDS 40.0%
GTTAATGGCCAGGTATATGT+TGG + chr7_1:75866720-75866739 Msa1038880:intron 40.0%
TATGTTGGATCTTACTCGCT+AGG + chr7_1:75866735-75866754 Msa1038880:CDS 40.0%
ACCTCAGACATTATAACCCA+GGG - chr7_1:75866774-75866793 None:intergenic 40.0%
TACCTCAGACATTATAACCC+AGG - chr7_1:75866775-75866794 None:intergenic 40.0%
GCAGAACCCTTAACGTTAAT+AGG - chr7_1:75866907-75866926 None:intergenic 40.0%
ATTAACGTTAAGGGTTCTGC+TGG + chr7_1:75866907-75866926 Msa1038880:CDS 40.0%
GCTTAGTAACCTTGGTTAAC+TGG + chr7_1:75866932-75866951 Msa1038880:CDS 40.0%
AGAACACAACCAGTTAACCA+AGG - chr7_1:75866944-75866963 None:intergenic 40.0%
TGGTTAACTGGTTGTGTTCT+TGG + chr7_1:75866944-75866963 Msa1038880:CDS 40.0%
GGAATGAATGAGTAGGAATC+AGG - chr7_1:75867050-75867069 None:intergenic 40.0%
!! TTTTTGACTCTGCCATTGCA+CGG + chr7_1:75867169-75867188 Msa1038880:intron 40.0%
! CCTGCTTTCCCATCTTTTTA+TGG - chr7_1:75867604-75867623 None:intergenic 40.0%
CCATAAAAAGATGGGAAAGC+AGG + chr7_1:75867601-75867620 Msa1038880:three_prime_UTR 40.0%
ACGTTACCTCGGAAAAGAAG+GGG - chr7_1:75862960-75862979 None:intergenic 45.0%
CAACGTTACCTCGGAAAAGA+AGG - chr7_1:75862962-75862981 None:intergenic 45.0%
CCTGTGCAACAGTAAGATTG+AGG - chr7_1:75863269-75863288 None:intergenic 45.0%
CCTCAATCTTACTGTTGCAC+AGG + chr7_1:75863266-75863285 Msa1038880:CDS 45.0%
GGTACAATAGCAGATTACGC+TGG + chr7_1:75863434-75863453 Msa1038880:CDS 45.0%
TCGCAGCTATTCTGCATTTC+CGG + chr7_1:75863572-75863591 Msa1038880:CDS 45.0%
AGCTATTCTGCATTTCCGGA+TGG + chr7_1:75863576-75863595 Msa1038880:CDS 45.0%
GATTGTAATGGCAAGCCATC+CGG - chr7_1:75863594-75863613 None:intergenic 45.0%
GCTTGCCATTACAATCGCAA+AGG + chr7_1:75863598-75863617 Msa1038880:CDS 45.0%
GCAGACCTTTGCGATTGTAA+TGG - chr7_1:75863606-75863625 None:intergenic 45.0%
GAGCTAAGGGCAATTTCTCA+TGG - chr7_1:75863920-75863939 None:intergenic 45.0%
ACAAATCTCAGGGGAGCTAA+GGG - chr7_1:75863933-75863952 None:intergenic 45.0%
AACAAATCTCAGGGGAGCTA+AGG - chr7_1:75863934-75863953 None:intergenic 45.0%
GGAGTGCAACTTCTTCAACA+AGG - chr7_1:75864000-75864019 None:intergenic 45.0%
CCCTTCACTGAGTGTAATTG+AGG + chr7_1:75864047-75864066 Msa1038880:intron 45.0%
CCCTCAATTACACTCAGTGA+AGG - chr7_1:75864051-75864070 None:intergenic 45.0%
!! GCTTTGTTGTTGATCGAGGA+GGG - chr7_1:75864127-75864146 None:intergenic 45.0%
!! AGCTTTGTTGTTGATCGAGG+AGG - chr7_1:75864128-75864147 None:intergenic 45.0%
GCTTTGCATTGGAAGACTGT+TGG + chr7_1:75864375-75864394 Msa1038880:CDS 45.0%
TGCATTGGAAGACTGTTGGT+AGG + chr7_1:75864379-75864398 Msa1038880:CDS 45.0%
! CTGTTGGTAGGATGTGGAAT+TGG + chr7_1:75864391-75864410 Msa1038880:CDS 45.0%
! TCCCTTGGTGTAATAGGTAC+CGG + chr7_1:75864509-75864528 Msa1038880:intron 45.0%
ACCGGTACCTATTACACCAA+GGG - chr7_1:75864513-75864532 None:intergenic 45.0%
AACCGGTACCTATTACACCA+AGG - chr7_1:75864514-75864533 None:intergenic 45.0%
ACGCCAAAGAATCTTAGAGG+GGG + chr7_1:75864549-75864568 Msa1038880:CDS 45.0%
TTGCTTCACCTGATGAACTG+CGG - chr7_1:75864580-75864599 None:intergenic 45.0%
TTGGTGCATTCGTGAATTGG+CGG + chr7_1:75864758-75864777 Msa1038880:CDS 45.0%
! CCTAGGAGAATCTGGGATAA+AGG - chr7_1:75864927-75864946 None:intergenic 45.0%
CCTTTATCCCAGATTCTCCT+AGG + chr7_1:75864924-75864943 Msa1038880:CDS 45.0%
TTATCCCAGATTCTCCTAGG+TGG + chr7_1:75864927-75864946 Msa1038880:CDS 45.0%
TGATCTTGTGCAGGCAAAGA+TGG + chr7_1:75865078-75865097 Msa1038880:intron 45.0%
GATCTTGTGCAGGCAAAGAT+GGG + chr7_1:75865079-75865098 Msa1038880:intron 45.0%
TCTTCTTTACAGCGCCTTAG+AGG + chr7_1:75865121-75865140 Msa1038880:CDS 45.0%
CTTCTTTACAGCGCCTTAGA+GGG + chr7_1:75865122-75865141 Msa1038880:CDS 45.0%
CATCAGCATTCTTCCCTCTA+AGG - chr7_1:75865138-75865157 None:intergenic 45.0%
TTATATCAGCTGGTGTGTGC+AGG + chr7_1:75865537-75865556 Msa1038880:intron 45.0%
! ACAGGGTTATCGGAGAGTAT+TGG + chr7_1:75865673-75865692 Msa1038880:intron 45.0%
!! TGGAAGACGACCACTTTTAC+TGG + chr7_1:75865872-75865891 Msa1038880:CDS 45.0%
! TCTGCAGTGGGAACTTGTTT+AGG + chr7_1:75866025-75866044 Msa1038880:CDS 45.0%
AGCCCTATCATTCTTCTTGC+AGG + chr7_1:75866060-75866079 Msa1038880:CDS 45.0%
CTCGCAAGTACTTATGCCAA+TGG - chr7_1:75866176-75866195 None:intergenic 45.0%
!!! AGTCCTATTTTGGCGCTTGT+TGG + chr7_1:75866399-75866418 Msa1038880:CDS 45.0%
ACACCAACAAGCGCCAAAAT+AGG - chr7_1:75866405-75866424 None:intergenic 45.0%
TCCCTGGGTTATAATGTCTG+AGG + chr7_1:75866770-75866789 Msa1038880:CDS 45.0%
CATATCATGCTGAGGAAGTG+AGG - chr7_1:75866852-75866871 None:intergenic 45.0%
TGCTGGAAGCTTAGTAACCT+TGG + chr7_1:75866924-75866943 Msa1038880:CDS 45.0%
! CTCATGACTTGGAGTTCAAC+AGG + chr7_1:75866991-75867010 Msa1038880:CDS 45.0%
GCTTGGTCAGGAACTTTCTT+TGG + chr7_1:75867378-75867397 Msa1038880:intron 45.0%
TTTGGATTCGCTGCCATATG+TGG + chr7_1:75867396-75867415 Msa1038880:CDS 45.0%
! AAAACTGGTTCCTGAGACCA+AGG + chr7_1:75867440-75867459 Msa1038880:CDS 45.0%
! AAACTGGTTCCTGAGACCAA+GGG + chr7_1:75867441-75867460 Msa1038880:CDS 45.0%
GTAAGTGTGAGAGTAGGAGG+TGG - chr7_1:75863080-75863099 None:intergenic 50.0%
GTGGTAAGTGTGAGAGTAGG+AGG - chr7_1:75863083-75863102 None:intergenic 50.0%
AGGGTGGTAAGTGTGAGAGT+AGG - chr7_1:75863086-75863105 None:intergenic 50.0%
!! ACCACCCTTGTCGCTGTTTT+TGG + chr7_1:75863098-75863117 Msa1038880:CDS 50.0%
ACCAAAAACAGCGACAAGGG+TGG - chr7_1:75863102-75863121 None:intergenic 50.0%
GGCACCAATCATTGCTCCAA+TGG - chr7_1:75863405-75863424 None:intergenic 50.0%
TGTTATGCTGAGCAGGCCAT+GGG + chr7_1:75863545-75863564 Msa1038880:intron 50.0%
GAATAGCTGCGAGAATCCCA+TGG - chr7_1:75863564-75863583 None:intergenic 50.0%
TTGGACTCTCCTTATGGCGT+AGG - chr7_1:75863679-75863698 None:intergenic 50.0%
AACTGAGCGTGTGGAAACAC+TGG - chr7_1:75864305-75864324 None:intergenic 50.0%
GATATCAGCAACTGAGCGTG+TGG - chr7_1:75864314-75864333 None:intergenic 50.0%
! GATGCTTGGTGGCTTTGCAT+TGG + chr7_1:75864364-75864383 Msa1038880:CDS 50.0%
! GGAAGACTGTTGGTAGGATG+TGG + chr7_1:75864385-75864404 Msa1038880:CDS 50.0%
AGAAGAATGATAGGGCTGCG+AGG - chr7_1:75866057-75866076 None:intergenic 50.0%
! TTTGGCGCTTGTTGGTGTAC+TGG + chr7_1:75866407-75866426 Msa1038880:CDS 50.0%
TGGATCTTACTCGCTAGGCA+TGG + chr7_1:75866740-75866759 Msa1038880:CDS 50.0%
GGATCTTACTCGCTAGGCAT+GGG + chr7_1:75866741-75866760 Msa1038880:CDS 50.0%
TGAGTAGGAATCAGGAACCG+AGG - chr7_1:75867042-75867061 None:intergenic 50.0%
! AACTGGTTCCTGAGACCAAG+GGG + chr7_1:75867442-75867461 Msa1038880:CDS 50.0%
TTCTTCTAGTGTACGCCCCT+TGG - chr7_1:75867460-75867479 None:intergenic 50.0%
! GCAAGTCCCCTTCTTTTCCG+AGG + chr7_1:75862951-75862970 Msa1038880:CDS 55.0%
GTGTTATGCTGAGCAGGCCA+TGG + chr7_1:75863544-75863563 Msa1038880:intron 55.0%
GGGATTCACCGCAGTTCATC+AGG + chr7_1:75864569-75864588 Msa1038880:CDS 55.0%
CCAGCCACCTAGGAGAATCT+GGG - chr7_1:75864934-75864953 None:intergenic 55.0%
ACCAGCCACCTAGGAGAATC+TGG - chr7_1:75864935-75864954 None:intergenic 55.0%
CAACAACTCACCAGCCACCT+AGG - chr7_1:75864944-75864963 None:intergenic 55.0%
GGCAAAGATGGGTCGCTTGA+AGG + chr7_1:75865090-75865109 Msa1038880:intron 55.0%
TAGGCATGGGAGCAATTCCC+TGG + chr7_1:75866754-75866773 Msa1038880:CDS 55.0%
AGGCATGGGAGCAATTCCCT+GGG + chr7_1:75866755-75866774 Msa1038880:CDS 55.0%
ATCGCATTCTACGGCTGCGC+TGG - chr7_1:75862739-75862758 None:intergenic 60.0%
CCCAGATTCTCCTAGGTGGC+TGG + chr7_1:75864931-75864950 Msa1038880:CDS 60.0%
AGTGTACGCCCCTTGGTCTC+AGG - chr7_1:75867453-75867472 None:intergenic 60.0%
!! GGCTGCGCTGGCTGACTGGA+TGG - chr7_1:75862727-75862746 None:intergenic 70.0%
!! CTACGGCTGCGCTGGCTGAC+TGG - chr7_1:75862731-75862750 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 75862721 75867924 75862721 ID=Msa1038880;Name=Msa1038880
chr7_1 mRNA 75862721 75867924 75862721 ID=Msa1038880-mRNA-1;Parent=Msa1038880;Name=Msa1038880-mRNA-1;_AED=0.34;_eAED=0.34;_QI=197|1|1|1|1|1|18|406|498
chr7_1 exon 75862721 75863142 75862721 ID=Msa1038880-mRNA-1:exon:19481;Parent=Msa1038880-mRNA-1
chr7_1 exon 75863225 75863287 75863225 ID=Msa1038880-mRNA-1:exon:19482;Parent=Msa1038880-mRNA-1
chr7_1 exon 75863377 75863466 75863377 ID=Msa1038880-mRNA-1:exon:19483;Parent=Msa1038880-mRNA-1
chr7_1 exon 75863560 75863619 75863560 ID=Msa1038880-mRNA-1:exon:19484;Parent=Msa1038880-mRNA-1
chr7_1 exon 75864364 75864429 75864364 ID=Msa1038880-mRNA-1:exon:19485;Parent=Msa1038880-mRNA-1
chr7_1 exon 75864525 75864590 75864525 ID=Msa1038880-mRNA-1:exon:19486;Parent=Msa1038880-mRNA-1
chr7_1 exon 75864721 75864796 75864721 ID=Msa1038880-mRNA-1:exon:19487;Parent=Msa1038880-mRNA-1
chr7_1 exon 75864888 75864952 75864888 ID=Msa1038880-mRNA-1:exon:19488;Parent=Msa1038880-mRNA-1
chr7_1 exon 75865091 75865183 75865091 ID=Msa1038880-mRNA-1:exon:19489;Parent=Msa1038880-mRNA-1
chr7_1 exon 75865290 75865370 75865290 ID=Msa1038880-mRNA-1:exon:19490;Parent=Msa1038880-mRNA-1
chr7_1 exon 75865464 75865548 75865464 ID=Msa1038880-mRNA-1:exon:19491;Parent=Msa1038880-mRNA-1
chr7_1 exon 75865677 75865720 75865677 ID=Msa1038880-mRNA-1:exon:19492;Parent=Msa1038880-mRNA-1
chr7_1 exon 75865831 75865893 75865831 ID=Msa1038880-mRNA-1:exon:19493;Parent=Msa1038880-mRNA-1
chr7_1 exon 75866022 75866081 75866022 ID=Msa1038880-mRNA-1:exon:19494;Parent=Msa1038880-mRNA-1
chr7_1 exon 75866375 75866428 75866375 ID=Msa1038880-mRNA-1:exon:19495;Parent=Msa1038880-mRNA-1
chr7_1 exon 75866732 75866791 75866732 ID=Msa1038880-mRNA-1:exon:19496;Parent=Msa1038880-mRNA-1
chr7_1 exon 75866898 75867012 75866898 ID=Msa1038880-mRNA-1:exon:19497;Parent=Msa1038880-mRNA-1
chr7_1 exon 75867388 75867924 75867388 ID=Msa1038880-mRNA-1:exon:19498;Parent=Msa1038880-mRNA-1
chr7_1 five_prime_UTR 75862721 75862917 75862721 ID=Msa1038880-mRNA-1:five_prime_utr;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75862918 75863142 75862918 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75863225 75863287 75863225 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75863377 75863466 75863377 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75863560 75863619 75863560 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75864364 75864429 75864364 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75864525 75864590 75864525 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75864721 75864796 75864721 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75864888 75864952 75864888 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75865091 75865183 75865091 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75865290 75865370 75865290 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75865464 75865548 75865464 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75865677 75865720 75865677 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75865831 75865893 75865831 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75866022 75866081 75866022 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75866375 75866428 75866375 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75866732 75866791 75866732 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75866898 75867012 75866898 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 CDS 75867388 75867518 75867388 ID=Msa1038880-mRNA-1:cds;Parent=Msa1038880-mRNA-1
chr7_1 three_prime_UTR 75867519 75867924 75867519 ID=Msa1038880-mRNA-1:three_prime_utr;Parent=Msa1038880-mRNA-1
Gene Sequence

>Msa1038880

ATGGACAGTAAAAGAATCATCGAATCTTCTTCTGCAAGTCCCCTTCTTTTCCGAGGTAACGTTGAATCACAATCACAACGCTATGATTCTTCTTCTGATGATGTTGCTTCCAATCATCAACAACACAAACAAAAGATTACCCCTTCTTCTTCTTCTATACCACCTCCTACTCTCACACTTACCACCCTTGTCGCTGTTTTTGGTTCTTACGTTTTTGGAACTGCTATCGGATATTCATCCCCTACTCAAGCTAGAATCATGATTGACCTCAATCTTACTGTTGCACAGTTTTCAATTTTCGGTTCAATATTGACCATTGGAGCAATGATTGGTGCCATTGTTAGTGGTACAATAGCAGATTACGCTGGTCGTCGTCTTGCCATGGGATTCTCGCAGCTATTCTGCATTTCCGGATGGCTTGCCATTACAATCGCAAAGGATGCTTGGTGGCTTTGCATTGGAAGACTGTTGGTAGGATGTGGAATTGGCCTGCTATCTTATGTGGTACCGGTTTATATAGCAGAAATAACGCCAAAGAATCTTAGAGGGGGATTCACCGCAGTTCATCAGCTAATGATCTGTTGTGGGATGTCATTAACTTATCTTATTGGTGCATTCGTGAATTGGCGGATTTTGGCTATAATAGGAATTGTTCCATGTCTTGTACAACTTCTGAGTCTACCCTTTATCCCAGATTCTCCTAGGTGGCTGGCAAAGATGGGTCGCTTGAAGGAGAGTGATTCTTCTTTACAGCGCCTTAGAGGGAAGAATGCTGATGTTTATAAAGAGGCCAATGAAATCAGAGATTATACAGAAGCCCTTCAGCAACAAACAGAAGCTAGCATTATTGGCTTATTTCAATTGCAATATTTGAAGTCACTTACAGTAGGACTTGGCTTGATGATACTACAACAGTTTGGAGGGATTAACGGCATTGTTTTCTACGCGAATTCTATATTTATATCAGCTGGGTTATCGGAGAGTATTGGAACTATAGCAATGGTTGCTGTTAAGATTCCAATGACAACTTTAGGAGTTTTTTTGATGGATAAATCTGGAAGACGACCACTTTTACTGTTGTCTGCAGTGGGAACTTGTTTAGGATGCTTCCTCGCAGCCCTATCATTCTTCTTGCAGGACATACATAAATGGAAGGAAGTCAGTCCTATTTTGGCGCTTGTTGGTGTACTGGTATATGTTGGATCTTACTCGCTAGGCATGGGAGCAATTCCCTGGGTTATAATGTCTGAGATATTTCCTATTAACGTTAAGGGTTCTGCTGGAAGCTTAGTAACCTTGGTTAACTGGTTGTGTTCTTGGATTATATCATATGCTTTTAACTTTCTCATGACTTGGAGTTCAACAGGAACTTTCTTTGGATTCGCTGCCATATGTGGCTTCACTGTTTTATTCGTAGCAAAACTGGTTCCTGAGACCAAGGGGCGTACACTAGAAGAAATTCAAGCTTCCTTGAATTCAAATTCAATGAAGAAATGA
Protein sequence

>Msa1038880

MDSKRIIESSSASPLLFRGNVESQSQRYDSSSDDVASNHQQHKQKITPSSSSIPPPTLTLTTLVAVFGSYVFGTAIGYSSPTQARIMIDLNLTVAQFSIFGSILTIGAMIGAIVSGTIADYAGRRLAMGFSQLFCISGWLAITIAKDAWWLCIGRLLVGCGIGLLSYVVPVYIAEITPKNLRGGFTAVHQLMICCGMSLTYLIGAFVNWRILAIIGIVPCLVQLLSLPFIPDSPRWLAKMGRLKESDSSLQRLRGKNADVYKEANEIRDYTEALQQQTEASIIGLFQLQYLKSLTVGLGLMILQQFGGINGIVFYANSIFISAGLSESIGTIAMVAVKIPMTTLGVFLMDKSGRRPLLLLSAVGTCLGCFLAALSFFLQDIHKWKEVSPILALVGVLVYVGSYSLGMGAIPWVIMSEIFPINVKGSAGSLVTLVNWLCSWIISYAFNFLMTWSSTGTFFGFAAICGFTVLFVAKLVPETKGRTLEEIQASLNSNSMKK*