Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051960 | sp|O48724|WEB1_ARATH | 61.230 | 699 | 234 | 11 | 250 | 919 | 115 | 805 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051960 | G7I3K8 | 95.140 | 926 | 36 | 2 | 1 | 924 | 1 | 919 | 0.0 | 1708 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0051960 | -0.803861 | 2.847747e-49 | -8.615850e-47 |
| Msa0012200 | Msa0051960 | 0.807485 | 4.939953e-50 | -8.615850e-47 |
| Msa0022470 | Msa0051960 | 0.809178 | 2.151356e-50 | -8.615850e-47 |
| Msa0025290 | Msa0051960 | -0.830013 | 3.729091e-55 | -8.615850e-47 |
| Msa0026630 | Msa0051960 | 0.866644 | 2.452567e-65 | -8.615850e-47 |
| Msa0029360 | Msa0051960 | 0.816718 | 4.787020e-52 | -8.615850e-47 |
| Msa0041840 | Msa0051960 | 0.828681 | 7.855320e-55 | -8.615850e-47 |
| Msa0043740 | Msa0051960 | 0.823791 | 1.144973e-53 | -8.615850e-47 |
| Msa0043850 | Msa0051960 | 0.801131 | 1.040790e-48 | -8.615850e-47 |
| Msa0051960 | Msa0061220 | 0.834216 | 3.407546e-56 | -8.615850e-47 |
| Msa0051960 | Msa0072600 | -0.815928 | 7.189808e-52 | -8.615850e-47 |
| Msa0051960 | Msa0077370 | 0.817664 | 2.933140e-52 | -8.615850e-47 |
| Msa0051960 | Msa0084710 | 0.805417 | 1.348163e-49 | -8.615850e-47 |
| Msa0051960 | Msa0090090 | 0.833795 | 4.342689e-56 | -8.615850e-47 |
| Msa0051960 | Msa0093950 | -0.801901 | 7.233785e-49 | -8.615850e-47 |
| Msa0051960 | Msa0094710 | 0.867313 | 1.500170e-65 | -8.615850e-47 |
| Msa0051960 | Msa0095940 | 0.847700 | 9.796183e-60 | -8.615850e-47 |
| Msa0051960 | Msa0101960 | 0.992219 | 5.386268e-192 | -8.615850e-47 |
| Msa0051960 | Msa0108760 | 0.807403 | 5.141492e-50 | -8.615850e-47 |
| Msa0051960 | Msa0112550 | -0.801416 | 9.095794e-49 | -8.615850e-47 |
| Msa0051960 | Msa0114790 | 0.824451 | 8.014097e-54 | -8.615850e-47 |
| Msa0051960 | Msa0117520 | 0.822963 | 1.787540e-53 | -8.615850e-47 |
| Msa0051960 | Msa0129770 | 0.819392 | 1.189700e-52 | -8.615850e-47 |
| Msa0051960 | Msa0137560 | 0.831878 | 1.300437e-55 | -8.615850e-47 |
| Msa0051960 | Msa0138680 | -0.819253 | 1.279862e-52 | -8.615850e-47 |
| Msa0051960 | Msa0162140 | 0.801967 | 7.011859e-49 | -8.615850e-47 |
| Msa0051960 | Msa0171330 | 0.807841 | 4.151201e-50 | -8.615850e-47 |
| Msa0051960 | Msa0174100 | 0.822384 | 2.438543e-53 | -8.615850e-47 |
| Msa0051960 | Msa0179140 | 0.815439 | 9.239856e-52 | -8.615850e-47 |
| Msa0051960 | Msa0182560 | 0.809338 | 1.987849e-50 | -8.615850e-47 |
| Msa0051960 | Msa0183390 | 0.803715 | 3.053868e-49 | -8.615850e-47 |
| Msa0051960 | Msa0198730 | 0.815052 | 1.126456e-51 | -8.615850e-47 |
| Msa0051960 | Msa0203090 | 0.823259 | 1.525524e-53 | -8.615850e-47 |
| Msa0051960 | Msa0213620 | -0.842560 | 2.400481e-58 | -8.615850e-47 |
| Msa0051960 | Msa0220400 | -0.809615 | 1.733729e-50 | -8.615850e-47 |
| Msa0051960 | Msa0227360 | 0.807403 | 5.141492e-50 | -8.615850e-47 |
| Msa0051960 | Msa0241480 | 0.826288 | 2.945735e-54 | -8.615850e-47 |
| Msa0051960 | Msa0257900 | 0.804989 | 1.657449e-49 | -8.615850e-47 |
| Msa0051960 | Msa0264680 | 0.832981 | 6.932440e-56 | -8.615850e-47 |
| Msa0051960 | Msa0276430 | 0.842221 | 2.952461e-58 | -8.615850e-47 |
| Msa0051960 | Msa0295420 | 0.800722 | 1.261197e-48 | -8.615850e-47 |
| Msa0051960 | Msa0296900 | 0.833842 | 4.227158e-56 | -8.615850e-47 |
| Msa0051960 | Msa0299530 | -0.819472 | 1.140816e-52 | -8.615850e-47 |
| Msa0051960 | Msa0302510 | 0.801264 | 9.773438e-49 | -8.615850e-47 |
| Msa0051960 | Msa0302730 | 0.827486 | 1.523391e-54 | -8.615850e-47 |
| Msa0051960 | Msa0302840 | 0.825935 | 3.573821e-54 | -8.615850e-47 |
| Msa0051960 | Msa0306000 | 0.819076 | 1.403955e-52 | -8.615850e-47 |
| Msa0051960 | Msa0306310 | 0.823933 | 1.060740e-53 | -8.615850e-47 |
| Msa0051960 | Msa0307420 | 0.813613 | 2.342919e-51 | -8.615850e-47 |
| Msa0051960 | Msa0310720 | -0.801798 | 7.595836e-49 | -8.615850e-47 |
| Msa0051960 | Msa0310730 | -0.816269 | 6.032915e-52 | -8.615850e-47 |
| Msa0051960 | Msa0316470 | 0.848923 | 4.498189e-60 | -8.615850e-47 |
| Msa0051960 | Msa0319020 | 0.811234 | 7.753664e-51 | -8.615850e-47 |
| Msa0051960 | Msa0331380 | 0.807819 | 4.195733e-50 | -8.615850e-47 |
| Msa0051960 | Msa0335080 | 0.840108 | 1.060539e-57 | -8.615850e-47 |
| Msa0051960 | Msa0349950 | 0.825605 | 4.279048e-54 | -8.615850e-47 |
| Msa0051960 | Msa0355550 | 0.831052 | 2.077436e-55 | -8.615850e-47 |
| Msa0051960 | Msa0365950 | 0.815413 | 9.365437e-52 | -8.615850e-47 |
| Msa0051960 | Msa0374420 | -0.801651 | 8.143610e-49 | -8.615850e-47 |
| Msa0051960 | Msa0383900 | 0.822851 | 1.898244e-53 | -8.615850e-47 |
| Msa0051960 | Msa0387040 | 0.822280 | 2.578189e-53 | -8.615850e-47 |
| Msa0051960 | Msa0388080 | -0.806666 | 7.362276e-50 | -8.615850e-47 |
| Msa0051960 | Msa0389900 | 0.800006 | 1.764293e-48 | -8.615850e-47 |
| Msa0051960 | Msa0403470 | -0.831930 | 1.262329e-55 | -8.615850e-47 |
| Msa0051960 | Msa0412260 | 0.805650 | 1.204934e-49 | -8.615850e-47 |
| Msa0051960 | Msa0425590 | 0.807068 | 6.053287e-50 | -8.615850e-47 |
| Msa0051960 | Msa0427310 | 0.808983 | 2.369064e-50 | -8.615850e-47 |
| Msa0051960 | Msa0428200 | 0.824649 | 7.199009e-54 | -8.615850e-47 |
| Msa0051960 | Msa0431900 | 0.826087 | 3.287890e-54 | -8.615850e-47 |
| Msa0051960 | Msa0434300 | 0.814737 | 1.322878e-51 | -8.615850e-47 |
| Msa0051960 | Msa0434400 | 0.815329 | 9.775220e-52 | -8.615850e-47 |
| Msa0051960 | Msa0442860 | 0.812785 | 3.559544e-51 | -8.615850e-47 |
| Msa0051960 | Msa0459860 | 0.804177 | 2.447730e-49 | -8.615850e-47 |
| Msa0051960 | Msa0476170 | -0.801161 | 1.026078e-48 | -8.615850e-47 |
| Msa0051960 | Msa0476890 | -0.801844 | 7.432451e-49 | -8.615850e-47 |
| Msa0051960 | Msa0480090 | -0.814635 | 1.393208e-51 | -8.615850e-47 |
| Msa0051960 | Msa0490320 | 0.838624 | 2.574058e-57 | -8.615850e-47 |
| Msa0051960 | Msa0497120 | 0.814900 | 1.217238e-51 | -8.615850e-47 |
| Msa0051960 | Msa0517270 | 0.829131 | 6.110374e-55 | -8.615850e-47 |
| Msa0051960 | Msa0517990 | 0.800909 | 1.155044e-48 | -8.615850e-47 |
| Msa0051960 | Msa0520770 | 0.821105 | 4.818096e-53 | -8.615850e-47 |
| Msa0051960 | Msa0523980 | 0.800670 | 1.292767e-48 | -8.615850e-47 |
| Msa0051960 | Msa0523990 | 0.800638 | 1.312226e-48 | -8.615850e-47 |
| Msa0051960 | Msa0528990 | 0.816125 | 6.497071e-52 | -8.615850e-47 |
| Msa0051960 | Msa0529000 | 0.804219 | 2.399855e-49 | -8.615850e-47 |
| Msa0051960 | Msa0530730 | 0.815351 | 9.664068e-52 | -8.615850e-47 |
| Msa0051960 | Msa0534610 | 0.815919 | 7.224266e-52 | -8.615850e-47 |
| Msa0051960 | Msa0545050 | 0.871598 | 6.048506e-67 | -8.615850e-47 |
| Msa0051960 | Msa0548650 | -0.847581 | 1.056144e-59 | -8.615850e-47 |
| Msa0051960 | Msa0556660 | 0.803827 | 2.894448e-49 | -8.615850e-47 |
| Msa0051960 | Msa0558650 | 0.846950 | 1.573637e-59 | -8.615850e-47 |
| Msa0051960 | Msa0561300 | 0.803676 | 3.110958e-49 | -8.615850e-47 |
| Msa0051960 | Msa0563860 | 0.805133 | 1.546311e-49 | -8.615850e-47 |
| Msa0051960 | Msa0567370 | 0.845108 | 4.987401e-59 | -8.615850e-47 |
| Msa0051960 | Msa0567430 | 0.851747 | 7.254363e-61 | -8.615850e-47 |
| Msa0051960 | Msa0567480 | 0.872063 | 4.240190e-67 | -8.615850e-47 |
| Msa0051960 | Msa0567520 | 0.861415 | 1.042584e-63 | -8.615850e-47 |
| Msa0051960 | Msa0570700 | 0.810300 | 1.234438e-50 | -8.615850e-47 |
| Msa0051960 | Msa0574930 | 0.848666 | 5.300543e-60 | -8.615850e-47 |
| Msa0051960 | Msa0576900 | 0.803374 | 3.593822e-49 | -8.615850e-47 |
| Msa0051960 | Msa0588710 | 0.813413 | 2.591889e-51 | -8.615850e-47 |
| Msa0051960 | Msa0590810 | 0.821822 | 3.290489e-53 | -8.615850e-47 |
| Msa0051960 | Msa0599220 | 0.827433 | 1.568679e-54 | -8.615850e-47 |
| Msa0051960 | Msa0600590 | 0.867437 | 1.369411e-65 | -8.615850e-47 |
| Msa0051960 | Msa0603690 | -0.804914 | 1.718234e-49 | -8.615850e-47 |
| Msa0051960 | Msa0610830 | 0.830440 | 2.933144e-55 | -8.615850e-47 |
| Msa0051960 | Msa0611060 | 0.806597 | 7.614555e-50 | -8.615850e-47 |
| Msa0051960 | Msa0613150 | 0.800702 | 1.273071e-48 | -8.615850e-47 |
| Msa0051960 | Msa0613420 | 0.874569 | 6.095128e-68 | -8.615850e-47 |
| Msa0051960 | Msa0619310 | 0.841135 | 5.710429e-58 | -8.615850e-47 |
| Msa0051960 | Msa0631130 | 0.818201 | 2.217572e-52 | -8.615850e-47 |
| Msa0051960 | Msa0635270 | 0.815562 | 8.675270e-52 | -8.615850e-47 |
| Msa0051960 | Msa0637930 | -0.805684 | 1.185410e-49 | -8.615850e-47 |
| Msa0051960 | Msa0641130 | 0.873563 | 1.334820e-67 | -8.615850e-47 |
| Msa0051960 | Msa0648950 | 0.803883 | 2.817775e-49 | -8.615850e-47 |
| Msa0051960 | Msa0650560 | 0.843612 | 1.258741e-58 | -8.615850e-47 |
| Msa0051960 | Msa0654640 | 0.804609 | 1.989888e-49 | -8.615850e-47 |
| Msa0051960 | Msa0679670 | 0.821101 | 4.828520e-53 | -8.615850e-47 |
| Msa0051960 | Msa0696380 | 0.817022 | 4.090516e-52 | -8.615850e-47 |
| Msa0051960 | Msa0698450 | 0.808054 | 3.739114e-50 | -8.615850e-47 |
| Msa0051960 | Msa0703810 | 0.806383 | 8.449682e-50 | -8.615850e-47 |
| Msa0051960 | Msa0704680 | 0.813890 | 2.035792e-51 | -8.615850e-47 |
| Msa0051960 | Msa0715670 | 0.842564 | 2.394944e-58 | -8.615850e-47 |
| Msa0051960 | Msa0719900 | -0.835511 | 1.608096e-56 | -8.615850e-47 |
| Msa0051960 | Msa0723580 | 0.820907 | 5.351207e-53 | -8.615850e-47 |
| Msa0051960 | Msa0734940 | 0.826116 | 3.236143e-54 | -8.615850e-47 |
| Msa0051960 | Msa0740630 | 0.821479 | 3.951385e-53 | -8.615850e-47 |
| Msa0051960 | Msa0742430 | 0.843158 | 1.664102e-58 | -8.615850e-47 |
| Msa0051960 | Msa0744640 | 0.849148 | 3.893569e-60 | -8.615850e-47 |
| Msa0051960 | Msa0764070 | 0.847783 | 9.292095e-60 | -8.615850e-47 |
| Msa0051960 | Msa0775160 | 0.806993 | 6.281447e-50 | -8.615850e-47 |
| Msa0051960 | Msa0781330 | -0.818905 | 1.535504e-52 | -8.615850e-47 |
| Msa0051960 | Msa0788450 | -0.811717 | 6.088363e-51 | -8.615850e-47 |
| Msa0051960 | Msa0795340 | 0.837985 | 3.762362e-57 | -8.615850e-47 |
| Msa0051960 | Msa0804690 | -0.810984 | 8.782720e-51 | -8.615850e-47 |
| Msa0051960 | Msa0804870 | 0.820314 | 7.321499e-53 | -8.615850e-47 |
| Msa0051960 | Msa0805890 | 0.806815 | 6.847796e-50 | -8.615850e-47 |
| Msa0051960 | Msa0807020 | 0.828893 | 6.979505e-55 | -8.615850e-47 |
| Msa0051960 | Msa0809940 | 0.812657 | 3.797887e-51 | -8.615850e-47 |
| Msa0051960 | Msa0820880 | 0.822405 | 2.410589e-53 | -8.615850e-47 |
| Msa0051960 | Msa0823540 | 0.814396 | 1.574212e-51 | -8.615850e-47 |
| Msa0051960 | Msa0825570 | -0.811032 | 8.575519e-51 | -8.615850e-47 |
| Msa0051960 | Msa0826540 | -0.816319 | 5.878405e-52 | -8.615850e-47 |
| Msa0051960 | Msa0828200 | 0.803798 | 2.934826e-49 | -8.615850e-47 |
| Msa0051960 | Msa0830030 | 0.824559 | 7.559167e-54 | -8.615850e-47 |
| Msa0051960 | Msa0832950 | 0.852378 | 4.802989e-61 | -8.615850e-47 |
| Msa0051960 | Msa0833270 | 0.856614 | 2.855473e-62 | -8.615850e-47 |
| Msa0051960 | Msa0841730 | 0.849532 | 3.044151e-60 | -8.615850e-47 |
| Msa0051960 | Msa0843700 | 0.804191 | 2.431694e-49 | -8.615850e-47 |
| Msa0051960 | Msa0852790 | 0.804356 | 2.246915e-49 | -8.615850e-47 |
| Msa0051960 | Msa0859040 | 0.844339 | 8.038410e-59 | -8.615850e-47 |
| Msa0051960 | Msa0862620 | 0.832771 | 7.817785e-56 | -8.615850e-47 |
| Msa0051960 | Msa0863990 | 0.809860 | 1.535741e-50 | -8.615850e-47 |
| Msa0051960 | Msa0864820 | -0.839296 | 1.724889e-57 | -8.615850e-47 |
| Msa0051960 | Msa0870510 | 0.818743 | 1.671600e-52 | -8.615850e-47 |
| Msa0051960 | Msa0882480 | -0.810784 | 9.701072e-51 | -8.615850e-47 |
| Msa0051960 | Msa0901270 | 0.802566 | 5.280170e-49 | -8.615850e-47 |
| Msa0051960 | Msa0930740 | 0.825960 | 3.524918e-54 | -8.615850e-47 |
| Msa0051960 | Msa0966580 | 0.847187 | 1.355614e-59 | -8.615850e-47 |
| Msa0051960 | Msa0966590 | 0.806742 | 7.094916e-50 | -8.615850e-47 |
| Msa0051960 | Msa0968470 | -0.856671 | 2.747140e-62 | -8.615850e-47 |
| Msa0051960 | Msa1000800 | 0.837578 | 4.784270e-57 | -8.615850e-47 |
| Msa0051960 | Msa1008390 | 0.801116 | 1.048012e-48 | -8.615850e-47 |
| Msa0051960 | Msa1011250 | 0.870010 | 2.015067e-66 | -8.615850e-47 |
| Msa0051960 | Msa1015880 | 0.821652 | 3.602806e-53 | -8.615850e-47 |
| Msa0051960 | Msa1016960 | 0.839321 | 1.699411e-57 | -8.615850e-47 |
| Msa0051960 | Msa1023310 | 0.808237 | 3.417790e-50 | -8.615850e-47 |
| Msa0051960 | Msa1026890 | 0.805788 | 1.126972e-49 | -8.615850e-47 |
| Msa0051960 | Msa1031460 | 0.868751 | 5.172452e-66 | -8.615850e-47 |
| Msa0051960 | Msa1038880 | 0.820162 | 7.933526e-53 | -8.615850e-47 |
| Msa0051960 | Msa1040960 | 0.855136 | 7.723588e-62 | -8.615850e-47 |
| Msa0051960 | Msa1058200 | 0.823015 | 1.738762e-53 | -8.615850e-47 |
| Msa0051960 | Msa1059670 | 0.834365 | 3.126801e-56 | -8.615850e-47 |
| Msa0051960 | Msa1062040 | 0.821672 | 3.565859e-53 | -8.615850e-47 |
| Msa0051960 | Msa1062080 | 0.824728 | 6.895646e-54 | -8.615850e-47 |
| Msa0051960 | Msa1064240 | 0.819383 | 1.195652e-52 | -8.615850e-47 |
| Msa0051960 | Msa1070540 | 0.857872 | 1.213533e-62 | -8.615850e-47 |
| Msa0051960 | Msa1079720 | -0.810819 | 9.535663e-51 | -8.615850e-47 |
| Msa0051960 | Msa1080610 | -0.822998 | 1.755155e-53 | -8.615850e-47 |
| Msa0051960 | Msa1080680 | -0.824399 | 8.242127e-54 | -8.615850e-47 |
| Msa0051960 | Msa1082520 | 0.889698 | 1.918735e-73 | -8.615850e-47 |
| Msa0051960 | Msa1082600 | 0.862030 | 6.764254e-64 | -8.615850e-47 |
| Msa0051960 | Msa1084890 | 0.801199 | 1.007970e-48 | -8.615850e-47 |
| Msa0051960 | Msa1089190 | 0.807317 | 5.361028e-50 | -8.615850e-47 |
| Msa0051960 | Msa1101240 | 0.859423 | 4.180218e-63 | -8.615850e-47 |
| Msa0051960 | Msa1104650 | 0.810865 | 9.317601e-51 | -8.615850e-47 |
| Msa0051960 | Msa1107200 | 0.800696 | 1.276676e-48 | -8.615850e-47 |
| Msa0051960 | Msa1124530 | -0.837112 | 6.298885e-57 | -8.615850e-47 |
| Msa0051960 | Msa1126320 | -0.817760 | 2.789524e-52 | -8.615850e-47 |
| Msa0051960 | Msa1131790 | 0.803196 | 3.912528e-49 | -8.615850e-47 |
| Msa0051960 | Msa1132980 | 0.823004 | 1.749077e-53 | -8.615850e-47 |
| Msa0051960 | Msa1140630 | 0.810737 | 9.932589e-51 | -8.615850e-47 |
| Msa0051960 | Msa1150780 | 0.806865 | 6.683933e-50 | -8.615850e-47 |
| Msa0051960 | Msa1154240 | 0.817959 | 2.515324e-52 | -8.615850e-47 |
| Msa0051960 | Msa1157110 | 0.814517 | 1.479622e-51 | -8.615850e-47 |
| Msa0051960 | Msa1159160 | 0.814975 | 1.171236e-51 | -8.615850e-47 |
| Msa0051960 | Msa1159170 | 0.835919 | 1.267313e-56 | -8.615850e-47 |
| Msa0051960 | Msa1160560 | 0.815001 | 1.156259e-51 | -8.615850e-47 |
| Msa0051960 | Msa1164720 | -0.821063 | 4.927462e-53 | -8.615850e-47 |
| Msa0051960 | Msa1165430 | 0.836738 | 7.848281e-57 | -8.615850e-47 |
| Msa0051960 | Msa1167150 | -0.829027 | 6.476373e-55 | -8.615850e-47 |
| Msa0051960 | Msa1168640 | 0.832633 | 8.456594e-56 | -8.615850e-47 |
| Msa0051960 | Msa1175100 | 0.806733 | 7.128175e-50 | -8.615850e-47 |
| Msa0051960 | Msa1180720 | 0.853713 | 1.992395e-61 | -8.615850e-47 |
| Msa0051960 | Msa1181140 | 0.842360 | 2.711118e-58 | -8.615850e-47 |
| Msa0051960 | Msa1208450 | -0.838872 | 2.221978e-57 | -8.615850e-47 |
| Msa0051960 | Msa1208990 | 0.866782 | 2.216810e-65 | -8.615850e-47 |
| Msa0051960 | Msa1225580 | 0.830511 | 2.817638e-55 | -8.615850e-47 |
| Msa0051960 | Msa1231710 | 0.863944 | 1.733530e-64 | -8.615850e-47 |
| Msa0051960 | Msa1234470 | 0.803720 | 3.046861e-49 | -8.615850e-47 |
| Msa0051960 | Msa1236440 | 0.804541 | 2.055532e-49 | -8.615850e-47 |
| Msa0051960 | Msa1239620 | 0.800965 | 1.125396e-48 | -8.615850e-47 |
| Msa0051960 | Msa1246790 | 0.804023 | 2.635245e-49 | -8.615850e-47 |
| Msa0051960 | Msa1256060 | 0.873584 | 1.312790e-67 | -8.615850e-47 |
| Msa0051960 | Msa1262540 | 0.808543 | 2.940964e-50 | -8.615850e-47 |
| Msa0051960 | Msa1272010 | 0.829654 | 4.562375e-55 | -8.615850e-47 |
| Msa0051960 | Msa1275510 | 0.804616 | 1.983453e-49 | -8.615850e-47 |
| Msa0051960 | Msa1277670 | 0.814884 | 1.227547e-51 | -8.615850e-47 |
| Msa0051960 | Msa1281660 | 0.802859 | 4.593790e-49 | -8.615850e-47 |
| Msa0051960 | Msa1289090 | 0.802905 | 4.493074e-49 | -8.615850e-47 |
| Msa0051960 | Msa1296240 | 0.823433 | 1.389083e-53 | -8.615850e-47 |
| Msa0051960 | Msa1298390 | -0.858612 | 7.308173e-63 | -8.615850e-47 |
| Msa0051960 | Msa1306830 | 0.802713 | 4.924389e-49 | -8.615850e-47 |
| Msa0051960 | Msa1312440 | 0.861896 | 7.432287e-64 | -8.615850e-47 |
| Msa0051960 | Msa1315480 | 0.826685 | 2.369153e-54 | -8.615850e-47 |
| Msa0051960 | Msa1320860 | 0.808705 | 2.715916e-50 | -8.615850e-47 |
| Msa0051960 | Msa1325560 | -0.803801 | 2.931293e-49 | -8.615850e-47 |
| Msa0051960 | Msa1355510 | 0.831359 | 1.745612e-55 | -8.615850e-47 |
| Msa0051960 | Msa1364080 | 0.803574 | 3.266719e-49 | -8.615850e-47 |
| Msa0051960 | Msa1365420 | -0.813766 | 2.167351e-51 | -8.615850e-47 |
| Msa0051960 | Msa1367790 | 0.813002 | 3.191007e-51 | -8.615850e-47 |
| Msa0051960 | Msa1368610 | 0.826313 | 2.904827e-54 | -8.615850e-47 |
| Msa0051960 | Msa1369920 | -0.813338 | 2.692315e-51 | -8.615850e-47 |
| Msa0051960 | Msa1375610 | -0.818718 | 1.693857e-52 | -8.615850e-47 |
| Msa0051960 | Msa1376550 | -0.801592 | 8.374484e-49 | -8.615850e-47 |
| Msa0051960 | Msa1379020 | 0.837062 | 6.486778e-57 | -8.615850e-47 |
| Msa0051960 | Msa1389170 | 0.803945 | 2.735772e-49 | -8.615850e-47 |
| Msa0051960 | Msa1395250 | 0.823132 | 1.632481e-53 | -8.615850e-47 |
| Msa0051960 | Msa1400200 | 0.828157 | 1.050611e-54 | -8.615850e-47 |
| Msa0051960 | Msa1404050 | 0.828137 | 1.062477e-54 | -8.615850e-47 |
| Msa0051960 | Msa1407760 | 0.815766 | 7.813315e-52 | -8.615850e-47 |
| Msa0051960 | Msa1407880 | 0.844596 | 6.856455e-59 | -8.615850e-47 |
| Msa0051960 | Msa1415410 | 0.833692 | 4.607740e-56 | -8.615850e-47 |
| Msa0051960 | Msa1419840 | 0.823266 | 1.519555e-53 | -8.615850e-47 |
| Msa0051960 | Msa1435320 | 0.823042 | 1.713423e-53 | -8.615850e-47 |
| Msa0051960 | Msa1443400 | 0.827345 | 1.646510e-54 | -8.615850e-47 |
| Msa0051960 | Msa1447870 | 0.833983 | 3.897181e-56 | -8.615850e-47 |
| Msa0051960 | Msa1448040 | 0.826909 | 2.094254e-54 | -8.615850e-47 |
| Msa0051960 | Msa1450440 | 0.804418 | 2.181453e-49 | -8.615850e-47 |
| Msa0051960 | Msa1456000 | 0.825756 | 3.940467e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051960 | MtrunA17_Chr1g0153431 | 95.140 | 926 | 36 | 2 | 1 | 924 | 1 | 919 | 0.0 | 1708 |
| Msa0051960 | MtrunA17_Chr3g0133891 | 65.796 | 766 | 236 | 6 | 174 | 924 | 193 | 947 | 0.0 | 926 |
| Msa0051960 | MtrunA17_Chr8g0369191 | 48.023 | 683 | 290 | 12 | 253 | 921 | 3 | 634 | 5.09e-155 | 470 |
| Msa0051960 | MtrunA17_Chr3g0102681 | 27.011 | 696 | 423 | 17 | 256 | 924 | 4 | 641 | 5.39e-27 | 117 |
| Msa0051960 | MtrunA17_Chr2g0290651 | 26.490 | 604 | 374 | 17 | 259 | 839 | 7 | 563 | 1.52e-22 | 103 |
| Msa0051960 | MtrunA17_Chr4g0013151 | 32.453 | 265 | 173 | 2 | 580 | 843 | 229 | 488 | 5.20e-20 | 95.5 |
| Msa0051960 | MtrunA17_Chr7g0244501 | 31.086 | 267 | 174 | 6 | 581 | 845 | 177 | 435 | 7.84e-20 | 94.7 |
| Msa0051960 | MtrunA17_Chr7g0244501 | 43.925 | 107 | 56 | 3 | 267 | 369 | 18 | 124 | 6.48e-11 | 66.2 |
| Msa0051960 | MtrunA17_Chr5g0446731 | 27.177 | 379 | 245 | 7 | 279 | 645 | 21 | 380 | 2.15e-12 | 71.2 |
| Msa0051960 | MtrunA17_Chr3g0078801 | 27.632 | 380 | 242 | 9 | 279 | 645 | 21 | 380 | 5.20e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051960 | AT2G26570.1 | 61.230 | 699 | 234 | 11 | 250 | 919 | 115 | 805 | 0.0 | 761 |
| Msa0051960 | AT2G26570.2 | 61.230 | 699 | 234 | 11 | 250 | 919 | 115 | 805 | 0.0 | 761 |
| Msa0051960 | AT4G33390.1 | 58.423 | 647 | 243 | 6 | 278 | 919 | 153 | 778 | 0.0 | 644 |
| Msa0051960 | AT5G42880.1 | 46.577 | 672 | 299 | 8 | 264 | 919 | 121 | 748 | 8.87e-159 | 484 |
| Msa0051960 | AT1G45545.2 | 44.130 | 707 | 333 | 7 | 227 | 918 | 91 | 750 | 1.08e-149 | 461 |
| Msa0051960 | AT1G45545.1 | 44.130 | 707 | 333 | 7 | 227 | 918 | 90 | 749 | 1.33e-149 | 461 |
| Msa0051960 | AT5G55860.1 | 26.133 | 662 | 417 | 17 | 279 | 917 | 20 | 632 | 4.64e-15 | 80.1 |
| Msa0051960 | AT1G12150.2 | 23.759 | 564 | 382 | 10 | 279 | 836 | 19 | 540 | 7.25e-11 | 66.2 |
| Msa0051960 | AT1G12150.1 | 23.759 | 564 | 382 | 10 | 279 | 836 | 19 | 540 | 7.25e-11 | 66.2 |
Find 165 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTGGTTTACTACATTT+TGG | 0.153241 | 1_2:+6131160 | None:intergenic |
| GGGGCATCTGCTAGTGAATT+TGG | 0.237130 | 1_2:+6133874 | None:intergenic |
| GATCTAACGGCTTCATCTTC+TGG | 0.244045 | 1_2:-6133143 | Msa0051960:CDS |
| AGACTCCATCGTCTCCTTCT+TGG | 0.244813 | 1_2:+6132051 | None:intergenic |
| TTCTGAGGTAAATTACTTAA+AGG | 0.258185 | 1_2:-6131928 | Msa0051960:CDS |
| GGTCATGCAAACAATGAAAA+TGG | 0.264151 | 1_2:-6131060 | Msa0051960:CDS |
| CGGAGAAAAGCCGGTGAAAT+AGG | 0.268026 | 1_2:-6131183 | Msa0051960:CDS |
| GATTGCCACAAAAGAGTCTT+TGG | 0.270589 | 1_2:-6132309 | Msa0051960:CDS |
| TCATGAACTGTTTCTTCTTT+CGG | 0.275067 | 1_2:+6133637 | None:intergenic |
| GCTTCTTTAGTTGATGAAAA+AGG | 0.275514 | 1_2:-6132413 | Msa0051960:CDS |
| AAGGAAGCTGTTTCTAAGTT+TGG | 0.278467 | 1_2:-6132960 | Msa0051960:CDS |
| AAAGCACATCCAACTCATTC+AGG | 0.287960 | 1_2:-6130958 | Msa0051960:CDS |
| TTTCAATTCTTAATCATAAT+AGG | 0.296039 | 1_2:+6134331 | None:intergenic |
| GACGCTTCTTGAAGCTTCTT+TGG | 0.305159 | 1_2:+6131720 | None:intergenic |
| GAGATCAAGATTCTCTCAAT+TGG | 0.317442 | 1_2:-6132226 | Msa0051960:CDS |
| AGCTGAGTTAAATGCCTATA+TGG | 0.326058 | 1_2:-6132087 | Msa0051960:CDS |
| TACCACTATGATTTATGTTC+TGG | 0.328707 | 1_2:+6131145 | None:intergenic |
| TGCCGTTGCAATTCTCGAAT+TGG | 0.338661 | 1_2:+6131392 | None:intergenic |
| TTTATCATCTAGTGAGTTGA+TGG | 0.341644 | 1_2:+6133792 | None:intergenic |
| AGCAGTTGAGTCGGCCAAAA+AGG | 0.354376 | 1_2:-6131988 | Msa0051960:CDS |
| ATCACTAACATGTACAAGTA+TGG | 0.361225 | 1_2:+6130840 | None:intergenic |
| AAGGCAAGGGAAGGAAAATT+AGG | 0.367717 | 1_2:-6131249 | Msa0051960:CDS |
| GTTTGACTTTGATTCCATAT+AGG | 0.370779 | 1_2:+6132073 | None:intergenic |
| AAAATTGTACGAGGAGATTC+CGG | 0.373780 | 1_2:-6132741 | Msa0051960:CDS |
| GATAGTATCACACCATTTGA+TGG | 0.385892 | 1_2:+6131468 | None:intergenic |
| TGTGTATAGCCATTGAATTT+CGG | 0.387944 | 1_2:-6130700 | Msa0051960:three_prime_UTR |
| GCTTCAACTGTTACTGTTAA+CGG | 0.395660 | 1_2:-6133541 | Msa0051960:CDS |
| TTGCCTTGCTTGATGCTCTT+CGG | 0.398129 | 1_2:+6132604 | None:intergenic |
| GGCACTCGTATACCTTGCTT+TGG | 0.399846 | 1_2:+6132490 | None:intergenic |
| GAATTGAAAGCTTGCAGAAA+GGG | 0.400309 | 1_2:-6134317 | Msa0051960:five_prime_UTR |
| CGATGCAGCAACAGCATCTT+CGG | 0.403753 | 1_2:+6132373 | None:intergenic |
| CTTCGGTTTGTGCCCTCTCT+AGG | 0.404658 | 1_2:+6132621 | None:intergenic |
| TTCGATGGAAGAGTCATTAT+CGG | 0.407175 | 1_2:+6133819 | None:intergenic |
| ATGCATATAAACAACCTTTA+GGG | 0.408601 | 1_2:+6133452 | None:intergenic |
| GGTTGGAGCTGTTATTATAT+CGG | 0.413352 | 1_2:+6133840 | None:intergenic |
| AGCGTCTGAAGAGGCGAATA+TGG | 0.414635 | 1_2:-6131703 | Msa0051960:CDS |
| GCTTCTGATGAACAATCTAT+AGG | 0.415441 | 1_2:-6133700 | Msa0051960:CDS |
| GTTGAGATGTCTCCTGTTGC+AGG | 0.416977 | 1_2:+6134360 | None:intergenic |
| GGCTGCCACACTGGAATCTT+CGG | 0.417044 | 1_2:+6132532 | None:intergenic |
| ACAAAGAAATAGTTGCTAGA+AGG | 0.418428 | 1_2:-6131305 | Msa0051960:CDS |
| ATCCGCACATTCTGCACATA+TGG | 0.421201 | 1_2:-6132285 | Msa0051960:CDS |
| AATCTGTAACCACAGGTTCC+TGG | 0.423293 | 1_2:+6133246 | None:intergenic |
| TTGTCTTCAACTTCCTCCAT+TGG | 0.430502 | 1_2:+6133922 | None:intergenic |
| CGAGCTGAACAAAACTAAAT+CGG | 0.430709 | 1_2:-6131799 | Msa0051960:CDS |
| GGCAACCTCGAGTTGCGCCT+TGG | 0.433398 | 1_2:+6132511 | None:intergenic |
| TGGAGTCTCAAAGGAGCAAC+TGG | 0.446054 | 1_2:-6132036 | Msa0051960:CDS |
| CGATGTTGATCATAATCATA+TGG | 0.453913 | 1_2:-6133518 | Msa0051960:CDS |
| TAGATTACTTGCAGCTCAAA+AGG | 0.454559 | 1_2:-6131589 | Msa0051960:CDS |
| TTACAGAAGCCGAAATTCAA+TGG | 0.458957 | 1_2:+6130691 | None:intergenic |
| TAAAGCTTCAAGTTCAGAAT+CGG | 0.460892 | 1_2:+6133582 | None:intergenic |
| TAGAGCAAGAATTAAGAAAG+TGG | 0.463769 | 1_2:-6131224 | Msa0051960:CDS |
| TCAACATTTCTTGAGGAGGT+TGG | 0.463850 | 1_2:+6133898 | None:intergenic |
| CAAAGAAATAGTTGCTAGAA+GGG | 0.465795 | 1_2:-6131304 | Msa0051960:CDS |
| TTGCGCCTTGGCTGCCACAC+TGG | 0.466144 | 1_2:+6132523 | None:intergenic |
| AAGAAAATTGCTGAAAATAG+AGG | 0.467267 | 1_2:-6133017 | Msa0051960:CDS |
| GAAGCTGTTTCTAAGTTTGG+AGG | 0.479133 | 1_2:-6132957 | Msa0051960:CDS |
| CACCGATGTTAACTCTGTAA+TGG | 0.484336 | 1_2:+6132469 | None:intergenic |
| TGCAAGAGCTTCTGAAAGGT+TGG | 0.484392 | 1_2:-6131556 | Msa0051960:CDS |
| GAGAAGCTTGTGAAGTGCTT+AGG | 0.488597 | 1_2:-6131665 | Msa0051960:CDS |
| GCATCAATAACTTCGGTTTG+AGG | 0.490058 | 1_2:+6133329 | None:intergenic |
| TGAAGTGCTTAGGAGAGTAA+AGG | 0.495073 | 1_2:-6131655 | Msa0051960:CDS |
| AATCGGCAGCTATGGCTCCT+AGG | 0.499690 | 1_2:+6133599 | None:intergenic |
| CATTGTACTAGCACCAGCCT+TGG | 0.500187 | 1_2:+6131617 | None:intergenic |
| GAAGCTTCTTTGGCAGCTCA+AGG | 0.501880 | 1_2:+6131730 | None:intergenic |
| GGACTTGAAAAGTAATGTAC+AGG | 0.501997 | 1_2:+6131093 | None:intergenic |
| TGATAATCACATGGATCTAA+CGG | 0.503541 | 1_2:-6133156 | Msa0051960:CDS |
| GGAATTAAGTTCATCACCCT+TGG | 0.504644 | 1_2:-6130763 | Msa0051960:three_prime_UTR |
| AATGAAGTGGATCCATCAAA+TGG | 0.505603 | 1_2:-6131480 | Msa0051960:CDS |
| AGATCAAGATTCTCTCAATT+GGG | 0.505960 | 1_2:-6132225 | Msa0051960:CDS |
| AAAGCTCAGAGTGGAAGAAA+TGG | 0.509731 | 1_2:-6132567 | Msa0051960:CDS |
| AATCATCGCTTGCCTCGATT+AGG | 0.512741 | 1_2:-6131866 | Msa0051960:CDS |
| ACGAGGAGATTCCGGAGTAC+AGG | 0.513676 | 1_2:-6132733 | Msa0051960:CDS |
| GAATGATCACAAAGAACTAA+AGG | 0.515894 | 1_2:-6133105 | Msa0051960:CDS |
| AACTTCAGCATCTGAGGTTG+AGG | 0.515980 | 1_2:+6133289 | None:intergenic |
| AAGTTCAGAATCGGCAGCTA+TGG | 0.516741 | 1_2:+6133591 | None:intergenic |
| AGTGCTTAGGAGAGTAAAGG+AGG | 0.520512 | 1_2:-6131652 | Msa0051960:CDS |
| GAAGCAGAAGAACACAGAAT+AGG | 0.520706 | 1_2:-6132263 | Msa0051960:CDS |
| AGAACATACCCTGATTAAGC+AGG | 0.522764 | 1_2:+6134761 | None:intergenic |
| AGATTCCAGTGTGGCAGCCA+AGG | 0.524007 | 1_2:-6132528 | Msa0051960:CDS |
| TGAGTTGATGGAAGCTTCGA+TGG | 0.525513 | 1_2:+6133804 | None:intergenic |
| ACATCAGGAATCTTGATTTG+AGG | 0.528054 | 1_2:+6133074 | None:intergenic |
| TGGATAAATCTGAGAAGGCA+AGG | 0.529566 | 1_2:-6131263 | Msa0051960:CDS |
| TGTTCAGAATCTGTAACCAC+AGG | 0.530763 | 1_2:+6133239 | None:intergenic |
| TGGAGGAATTGTCGATTGGA+AGG | 0.530992 | 1_2:-6132940 | Msa0051960:CDS |
| AACTTCATTCAACTTCTCCA+TGG | 0.531531 | 1_2:+6131329 | None:intergenic |
| CATGGACAACGGAGAAAAGC+CGG | 0.537596 | 1_2:-6131192 | Msa0051960:CDS |
| ACACTTCCATCAGCAACATC+AGG | 0.542110 | 1_2:+6133059 | None:intergenic |
| GGAATCATTGAAGATTGCTA+TGG | 0.544639 | 1_2:-6131283 | Msa0051960:CDS |
| TTGAGCAGCATCAATAACTT+CGG | 0.545249 | 1_2:+6133322 | None:intergenic |
| TCCTCACCGGATGTGAAAAG+TGG | 0.546596 | 1_2:-6131036 | Msa0051960:CDS |
| TGTCAAGCTCCTGAAGTACT+TGG | 0.546825 | 1_2:+6132678 | None:intergenic |
| ATGGAAGAGTCATTATCGGT+TGG | 0.547014 | 1_2:+6133823 | None:intergenic |
| AGAATTGAAAGCTTGCAGAA+AGG | 0.548483 | 1_2:-6134318 | Msa0051960:five_prime_UTR |
| AGGAGACGATGGAGTCTCAA+AGG | 0.549934 | 1_2:-6132045 | Msa0051960:CDS |
| CAACTCTTCTGTTACAGAAG+AGG | 0.555295 | 1_2:+6133483 | None:intergenic |
| GTTTGCATGACCATAAGACT+TGG | 0.556311 | 1_2:+6131071 | None:intergenic |
| AAGCACATCCAACTCATTCA+GGG | 0.559299 | 1_2:-6130957 | Msa0051960:CDS |
| AGTTTGGAGGAATTGTCGAT+TGG | 0.559426 | 1_2:-6132944 | Msa0051960:CDS |
| GAAGCAGAACAAGCCAAGGC+TGG | 0.560630 | 1_2:-6131630 | Msa0051960:CDS |
| TGGTTCAACATTTCTTGAGG+AGG | 0.561487 | 1_2:+6133894 | None:intergenic |
| TGATATTGTGAACATGCATA+AGG | 0.563041 | 1_2:-6133204 | Msa0051960:CDS |
| TTCTGAGATCGATATAGCTA+AGG | 0.564068 | 1_2:-6131367 | Msa0051960:CDS |
| TGAGGTAAATTACTTAAAGG+TGG | 0.567020 | 1_2:-6131925 | Msa0051960:CDS |
| AACTCGAGGTTGCCAAAGCA+AGG | 0.569107 | 1_2:-6132502 | Msa0051960:CDS |
| GGAGACTGAATTGAAAACCA+TGG | 0.569236 | 1_2:-6131346 | Msa0051960:CDS |
| AAGATTCCTGATGTTGCTGA+TGG | 0.570955 | 1_2:-6133065 | Msa0051960:CDS |
| AAGATTCTCTCAATTGGGAG+AGG | 0.572141 | 1_2:-6132220 | Msa0051960:CDS |
| GATTAGGCAAAGAGAGGGAA+TGG | 0.573233 | 1_2:-6131850 | Msa0051960:CDS |
| GCTTCAAGAAGCGTCTGAAG+AGG | 0.573977 | 1_2:-6131712 | Msa0051960:CDS |
| AACTAAAACTGAGCCTAGAG+AGG | 0.574371 | 1_2:-6132634 | Msa0051960:CDS |
| AACCAGAACATAAATCATAG+TGG | 0.575238 | 1_2:-6131147 | Msa0051960:CDS |
| ATCAAATGGTGTGATACTAT+CGG | 0.575258 | 1_2:-6131466 | Msa0051960:CDS |
| CGAGTTAGATTCGTTGCGTG+TGG | 0.575491 | 1_2:-6132441 | Msa0051960:CDS |
| ATTTGGTTCAACATTTCTTG+AGG | 0.575747 | 1_2:+6133891 | None:intergenic |
| TACATGAACTTCAGCATCTG+AGG | 0.576726 | 1_2:+6133283 | None:intergenic |
| TGCTATGGATAAATCTGAGA+AGG | 0.581662 | 1_2:-6131268 | Msa0051960:CDS |
| GGCAGCCAAGGCGCAACTCG+AGG | 0.584945 | 1_2:-6132516 | Msa0051960:CDS |
| GAATCAAAGTCAAACCAAGA+AGG | 0.585631 | 1_2:-6132065 | Msa0051960:CDS |
| TTTGCATGACCATAAGACTT+GGG | 0.589944 | 1_2:+6131072 | None:intergenic |
| CAATGAAAATGGATCCTCAC+CGG | 0.594662 | 1_2:-6131049 | Msa0051960:CDS |
| AGCTTCTCGAGCAAGCAAGT+TGG | 0.594786 | 1_2:+6131680 | None:intergenic |
| AAACCGAAGAGCATCAAGCA+AGG | 0.595409 | 1_2:-6132607 | Msa0051960:CDS |
| AGTGACTACCCTGAATGAGT+TGG | 0.597230 | 1_2:+6130949 | None:intergenic |
| GGATAAATCTGAGAAGGCAA+GGG | 0.599722 | 1_2:-6131262 | Msa0051960:CDS |
| TCCCTCTCTTTGCCTAATCG+AGG | 0.600136 | 1_2:+6131854 | None:intergenic |
| AGCTCCATTCGAATCTGTCA+AGG | 0.606757 | 1_2:-6132979 | Msa0051960:CDS |
| AGATTCTCTCAATTGGGAGA+GGG | 0.608093 | 1_2:-6132219 | Msa0051960:CDS |
| AGAAAGTGGAGAGCAGAACA+TGG | 0.609255 | 1_2:-6131210 | Msa0051960:CDS |
| GCCTCGATTAGGCAAAGAGA+GGG | 0.612208 | 1_2:-6131855 | Msa0051960:CDS |
| GGAGGAAGCAGAACAAGCCA+AGG | 0.613105 | 1_2:-6131634 | Msa0051960:CDS |
| TATTTGATTTCAGCGAAGCA+AGG | 0.615921 | 1_2:-6132783 | Msa0051960:intron |
| GCTTTAGAAGATATACAAGA+TGG | 0.618193 | 1_2:-6133565 | Msa0051960:CDS |
| AGCCAATTCGAGAATTGCAA+CGG | 0.618494 | 1_2:-6131394 | Msa0051960:CDS |
| ATCGAAGCAAGTGGAAAAGA+CGG | 0.619879 | 1_2:-6132354 | Msa0051960:CDS |
| TCCGGAGTACAGGAAAAGAT+CGG | 0.623837 | 1_2:-6132723 | Msa0051960:CDS |
| GAGTTGCAGATTGACCCTAA+AGG | 0.624207 | 1_2:-6133466 | Msa0051960:intron |
| GCTTCCTTGACAGATTCGAA+TGG | 0.625828 | 1_2:+6132975 | None:intergenic |
| AAATCTGAGAAGGCAAGGGA+AGG | 0.626732 | 1_2:-6131258 | Msa0051960:CDS |
| AAGCTGCAAGAGCTTCTGAA+AGG | 0.629129 | 1_2:-6131560 | Msa0051960:CDS |
| CATAGAGAAAGCTACTTCTG+AGG | 0.629665 | 1_2:-6131943 | Msa0051960:CDS |
| TCAAACCAAGAAGGAGACGA+TGG | 0.635731 | 1_2:-6132056 | Msa0051960:CDS |
| TAGAAGCAACAACAATGAAG+TGG | 0.641955 | 1_2:-6131493 | Msa0051960:CDS |
| AATGCAAGCAGCAGTTGAGT+CGG | 0.646409 | 1_2:-6131997 | Msa0051960:CDS |
| ACACAGAATAGGAACAGTCA+TGG | 0.648205 | 1_2:-6132252 | Msa0051960:CDS |
| TGCCTCGATTAGGCAAAGAG+AGG | 0.654005 | 1_2:-6131856 | Msa0051960:CDS |
| TTCCATATGTGCAGAATGTG+CGG | 0.654988 | 1_2:+6132283 | None:intergenic |
| TGTAACAGAACAAAGTCACC+AGG | 0.655246 | 1_2:-6133264 | Msa0051960:CDS |
| AGAACTTGCAAAGCTCAGAG+TGG | 0.657807 | 1_2:-6132576 | Msa0051960:CDS |
| GATAGACGCAACTGTAATCG+AGG | 0.658612 | 1_2:+6131827 | None:intergenic |
| ACAAAGTCACCAGGAACCTG+TGG | 0.660157 | 1_2:-6133255 | Msa0051960:CDS |
| CGGCAGCTATGGCTCCTAGG+TGG | 0.667123 | 1_2:+6133602 | None:intergenic |
| ACTAAAACTGAGCCTAGAGA+GGG | 0.671828 | 1_2:-6132633 | Msa0051960:CDS |
| AGAGTGGAAGAAATGGAGCA+AGG | 0.675194 | 1_2:-6132560 | Msa0051960:CDS |
| TTGAGATGTCTCCTGTTGCA+GGG | 0.677433 | 1_2:+6134361 | None:intergenic |
| GTGAACATGCATAAGGATGG+TGG | 0.677588 | 1_2:-6133197 | Msa0051960:CDS |
| ATTGTGAACATGCATAAGGA+TGG | 0.682817 | 1_2:-6133200 | Msa0051960:CDS |
| TGTTGCTGCATCGAAGCAAG+TGG | 0.684932 | 1_2:-6132363 | Msa0051960:CDS |
| AAGATTGAGATATACCTCGA+CGG | 0.686708 | 1_2:+6132902 | None:intergenic |
| GAAACAGAAGAAAACCACCT+AGG | 0.696012 | 1_2:-6133616 | Msa0051960:CDS |
| TCATCGAATGATAGCCGTCG+AGG | 0.697705 | 1_2:-6132916 | Msa0051960:intron |
| AGCATTGCAAGAGAGCGAGT+CGG | 0.699995 | 1_2:-6131517 | Msa0051960:CDS |
| GGAGAGCAGAACATGGACAA+CGG | 0.701482 | 1_2:-6131203 | Msa0051960:CDS |
| GGAGTACAGGAAAAGATCGG+AGG | 0.701685 | 1_2:-6132720 | Msa0051960:CDS |
| TGCCATTACAGAGTTAACAT+CGG | 0.702576 | 1_2:-6132471 | Msa0051960:CDS |
| TATTGCCGAAGATTCCAGTG+TGG | 0.782850 | 1_2:-6132537 | Msa0051960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATAACAAAAGT+AGG | + | chr1_2:6130785-6130804 | None:intergenic | 15.0% |
| !!! | TGATATAATTATTTCTCATA+TGG | - | chr1_2:6131002-6131021 | Msa0051960:CDS | 15.0% |
| !! | TTTCAATTCTTAATCATAAT+AGG | + | chr1_2:6131184-6131203 | None:intergenic | 15.0% |
| !!! | GAATATATCTGAATTATTTT+AGG | - | chr1_2:6131223-6131242 | Msa0051960:CDS | 15.0% |
| !! | AAAAAATGAAGCAAAAAACT+TGG | + | chr1_2:6130844-6130863 | None:intergenic | 20.0% |
| !!! | ATTATGAATTTTTTGCAACA+TGG | + | chr1_2:6130916-6130935 | None:intergenic | 20.0% |
| !! | TATTATAGCCAAAAAAATTC+TGG | - | chr1_2:6130936-6130955 | Msa0051960:exon | 20.0% |
| !! | TAATAATTCTCTAGCAAATT+TGG | - | chr1_2:6131027-6131046 | Msa0051960:CDS | 20.0% |
| !!! | GAGTTTAGTCAATTTTTATA+TGG | + | chr1_2:6131113-6131132 | None:intergenic | 20.0% |
| !! | AGAATAATGACATATACAAT+AGG | + | chr1_2:6131308-6131327 | None:intergenic | 20.0% |
| !! | AATTTGAATATGTATGCATA+GGG | - | chr1_2:6131386-6131405 | Msa0051960:CDS | 20.0% |
| !! | GTGATTATCAAAAAAACTAT+CGG | + | chr1_2:6132346-6132365 | None:intergenic | 20.0% |
| !!! | TAGTTTTTTTGATAATCACA+TGG | - | chr1_2:6132347-6132366 | Msa0051960:CDS | 20.0% |
| !!! | TCAAAAAATTTTGTTTGCTA+AGG | - | chr1_2:6133353-6133372 | Msa0051960:CDS | 20.0% |
| !!! | TTTGCAAACCAGAATTTTTT+TGG | + | chr1_2:6130947-6130966 | None:intergenic | 25.0% |
| !! | AACCTAGTGATAGTAATTTT+AGG | - | chr1_2:6131360-6131379 | Msa0051960:CDS | 25.0% |
| ! | AACCTAAAATTACTATCACT+AGG | + | chr1_2:6131365-6131384 | None:intergenic | 25.0% |
| ! | CAATTTGAATATGTATGCAT+AGG | - | chr1_2:6131385-6131404 | Msa0051960:CDS | 25.0% |
| !! | CTCAATTTCTTTTTAACCAA+TGG | - | chr1_2:6131574-6131593 | Msa0051960:CDS | 25.0% |
| !! | AATTTCTTTTTAACCAATGG+AGG | - | chr1_2:6131577-6131596 | Msa0051960:CDS | 25.0% |
| !! | TTATATCGGTATTTTCTTGA+GGG | + | chr1_2:6131661-6131680 | None:intergenic | 25.0% |
| !! | ATTATATCGGTATTTTCTTG+AGG | + | chr1_2:6131662-6131681 | None:intergenic | 25.0% |
| ! | ATGCATATAAACAACCTTTA+GGG | + | chr1_2:6132063-6132082 | None:intergenic | 25.0% |
| ! | AAGAAAATTGCTGAAAATAG+AGG | - | chr1_2:6132495-6132514 | Msa0051960:CDS | 25.0% |
| ! | TGAAACAATCGAAATTGAAA+CGG | + | chr1_2:6132705-6132724 | None:intergenic | 25.0% |
| !!! | TTCTGAGGTAAATTACTTAA+AGG | - | chr1_2:6133584-6133603 | Msa0051960:CDS | 25.0% |
| !! | AAAAATCACATAGTGGAAAT+TGG | + | chr1_2:6134721-6134740 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTTTCTCACCAA+GGG | + | chr1_2:6134768-6134787 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTTTTTCTCACCA+AGG | + | chr1_2:6134769-6134788 | None:intergenic | 25.0% |
| ! | AATTTTCTTCCTGCTTAATC+AGG | - | chr1_2:6130742-6130761 | Msa0051960:three_prime_UTR | 30.0% |
| ! | ATTTTCTTCCTGCTTAATCA+GGG | - | chr1_2:6130743-6130762 | Msa0051960:three_prime_UTR | 30.0% |
| !! | AAATTCTGGTTTGCAAAGTT+TGG | - | chr1_2:6130950-6130969 | Msa0051960:exon | 30.0% |
| GTTTATGAAATTGCTTCTTC+TGG | - | chr1_2:6131273-6131292 | Msa0051960:CDS | 30.0% | |
| ! | ACTTGCCTTTTAGATACTTT+TGG | - | chr1_2:6131547-6131566 | Msa0051960:CDS | 30.0% |
| ! | ATTTGGTTCAACATTTCTTG+AGG | + | chr1_2:6131624-6131643 | None:intergenic | 30.0% |
| ! | TATATCGGTATTTTCTTGAG+GGG | + | chr1_2:6131660-6131679 | None:intergenic | 30.0% |
| ! | TTTATCATCTAGTGAGTTGA+TGG | + | chr1_2:6131723-6131742 | None:intergenic | 30.0% |
| ! | TCATGAACTGTTTCTTCTTT+CGG | + | chr1_2:6131878-6131897 | None:intergenic | 30.0% |
| ! | TAAAGCTTCAAGTTCAGAAT+CGG | + | chr1_2:6131933-6131952 | None:intergenic | 30.0% |
| !! | GCTTTAGAAGATATACAAGA+TGG | - | chr1_2:6131947-6131966 | Msa0051960:CDS | 30.0% |
| CGATGTTGATCATAATCATA+TGG | - | chr1_2:6131994-6132013 | Msa0051960:CDS | 30.0% | |
| CATGCATATAAACAACCTTT+AGG | + | chr1_2:6132064-6132083 | None:intergenic | 30.0% | |
| TGATATTGTGAACATGCATA+AGG | - | chr1_2:6132308-6132327 | Msa0051960:CDS | 30.0% | |
| TGATAATCACATGGATCTAA+CGG | - | chr1_2:6132356-6132375 | Msa0051960:CDS | 30.0% | |
| GAATGATCACAAAGAACTAA+AGG | - | chr1_2:6132407-6132426 | Msa0051960:CDS | 30.0% | |
| ! | GCAATTTTCTTCTCATTTGT+AGG | + | chr1_2:6132486-6132505 | None:intergenic | 30.0% |
| TTTGAGCAAAACACAAAGAA+AGG | + | chr1_2:6132637-6132656 | None:intergenic | 30.0% | |
| CATGAAGAAGTTAAGTATTC+AGG | + | chr1_2:6132664-6132683 | None:intergenic | 30.0% | |
| !! | TACTTGGACTTTTTCTTGTT+CGG | + | chr1_2:6132821-6132840 | None:intergenic | 30.0% |
| !! | GCTTCTTTAGTTGATGAAAA+AGG | - | chr1_2:6133099-6133118 | Msa0051960:CDS | 30.0% |
| AGATCAAGATTCTCTCAATT+GGG | - | chr1_2:6133287-6133306 | Msa0051960:CDS | 30.0% | |
| ! | GTTTGACTTTGATTCCATAT+AGG | + | chr1_2:6133442-6133461 | None:intergenic | 30.0% |
| !! | TACTTCTTCAAGTTCCTTTT+TGG | + | chr1_2:6133541-6133560 | None:intergenic | 30.0% |
| TGAGGTAAATTACTTAAAGG+TGG | - | chr1_2:6133587-6133606 | Msa0051960:CDS | 30.0% | |
| !! | TATTGCTTTTGTTCAGATGA+AGG | - | chr1_2:6133737-6133756 | Msa0051960:CDS | 30.0% |
| ATCAAATGGTGTGATACTAT+CGG | - | chr1_2:6134046-6134065 | Msa0051960:intron | 30.0% | |
| ACAAAGAAATAGTTGCTAGA+AGG | - | chr1_2:6134207-6134226 | Msa0051960:intron | 30.0% | |
| CAAAGAAATAGTTGCTAGAA+GGG | - | chr1_2:6134208-6134227 | Msa0051960:intron | 30.0% | |
| TAGAGCAAGAATTAAGAAAG+TGG | - | chr1_2:6134288-6134307 | Msa0051960:intron | 30.0% | |
| !!! | TGTTCTGGTTTACTACATTT+TGG | + | chr1_2:6134355-6134374 | None:intergenic | 30.0% |
| AACCAGAACATAAATCATAG+TGG | - | chr1_2:6134365-6134384 | Msa0051960:five_prime_UTR | 30.0% | |
| TACCACTATGATTTATGTTC+TGG | + | chr1_2:6134370-6134389 | None:intergenic | 30.0% | |
| ATCACTAACATGTACAAGTA+TGG | + | chr1_2:6134675-6134694 | None:intergenic | 30.0% | |
| ! | TGATTTTGCAGTATTGTGAA+TGG | - | chr1_2:6134691-6134710 | Msa0051960:intron | 30.0% |
| ! | TTTCCACTATGTGATTTTTG+AGG | - | chr1_2:6134722-6134741 | Msa0051960:intron | 30.0% |
| ! | CCTTGAAAAAAGAAGCACAA+AGG | + | chr1_2:6130819-6130838 | None:intergenic | 35.0% |
| !!! | CCTTTGTGCTTCTTTTTTCA+AGG | - | chr1_2:6130816-6130835 | Msa0051960:three_prime_UTR | 35.0% |
| AGAATTGAAAGCTTGCAGAA+AGG | - | chr1_2:6131194-6131213 | Msa0051960:CDS | 35.0% | |
| GAATTGAAAGCTTGCAGAAA+GGG | - | chr1_2:6131195-6131214 | Msa0051960:CDS | 35.0% | |
| !! | GAGTGCCAAAAGTATCTAAA+AGG | + | chr1_2:6131555-6131574 | None:intergenic | 35.0% |
| GGTTGGAGCTGTTATTATAT+CGG | + | chr1_2:6131675-6131694 | None:intergenic | 35.0% | |
| TTCGATGGAAGAGTCATTAT+CGG | + | chr1_2:6131696-6131715 | None:intergenic | 35.0% | |
| GCTTCTGATGAACAATCTAT+AGG | - | chr1_2:6131812-6131831 | Msa0051960:CDS | 35.0% | |
| GCTTCAACTGTTACTGTTAA+CGG | - | chr1_2:6131971-6131990 | Msa0051960:CDS | 35.0% | |
| TTGAGCAGCATCAATAACTT+CGG | + | chr1_2:6132193-6132212 | None:intergenic | 35.0% | |
| ATTGTGAACATGCATAAGGA+TGG | - | chr1_2:6132312-6132331 | Msa0051960:CDS | 35.0% | |
| ! | ACATCAGGAATCTTGATTTG+AGG | + | chr1_2:6132441-6132460 | None:intergenic | 35.0% |
| !! | AAGGAAGCTGTTTCTAAGTT+TGG | - | chr1_2:6132552-6132571 | Msa0051960:CDS | 35.0% |
| AAGATTGAGATATACCTCGA+CGG | + | chr1_2:6132613-6132632 | None:intergenic | 35.0% | |
| ! | TATTTGATTTCAGCGAAGCA+AGG | - | chr1_2:6132729-6132748 | Msa0051960:CDS | 35.0% |
| ACAGCTTGAAAAATTGTACG+AGG | - | chr1_2:6132762-6132781 | Msa0051960:CDS | 35.0% | |
| AAAATTGTACGAGGAGATTC+CGG | - | chr1_2:6132771-6132790 | Msa0051960:CDS | 35.0% | |
| AGAAAAAGTCCAAGTACTTC+AGG | - | chr1_2:6132825-6132844 | Msa0051960:intron | 35.0% | |
| TGCCATTACAGAGTTAACAT+CGG | - | chr1_2:6133041-6133060 | Msa0051960:CDS | 35.0% | |
| GAGATCAAGATTCTCTCAAT+TGG | - | chr1_2:6133286-6133305 | Msa0051960:CDS | 35.0% | |
| AGCTGAGTTAAATGCCTATA+TGG | - | chr1_2:6133425-6133444 | Msa0051960:intron | 35.0% | |
| GAATCAAAGTCAAACCAAGA+AGG | - | chr1_2:6133447-6133466 | Msa0051960:intron | 35.0% | |
| CGAGCTGAACAAAACTAAAT+CGG | - | chr1_2:6133713-6133732 | Msa0051960:CDS | 35.0% | |
| GTTCAGATGAAGGAAAAAGA+AGG | - | chr1_2:6133747-6133766 | Msa0051960:CDS | 35.0% | |
| TAGATTACTTGCAGCTCAAA+AGG | - | chr1_2:6133923-6133942 | Msa0051960:exon | 35.0% | |
| TAGAAGCAACAACAATGAAG+TGG | - | chr1_2:6134019-6134038 | Msa0051960:intron | 35.0% | |
| AATGAAGTGGATCCATCAAA+TGG | - | chr1_2:6134032-6134051 | Msa0051960:intron | 35.0% | |
| GATAGTATCACACCATTTGA+TGG | + | chr1_2:6134047-6134066 | None:intergenic | 35.0% | |
| !! | TTCTGAGATCGATATAGCTA+AGG | - | chr1_2:6134145-6134164 | Msa0051960:intron | 35.0% |
| AACTTCATTCAACTTCTCCA+TGG | + | chr1_2:6134186-6134205 | None:intergenic | 35.0% | |
| GGAATCATTGAAGATTGCTA+TGG | - | chr1_2:6134229-6134248 | Msa0051960:intron | 35.0% | |
| TGCTATGGATAAATCTGAGA+AGG | - | chr1_2:6134244-6134263 | Msa0051960:intron | 35.0% | |
| !! | TACATTTTGGCCTATTTCAC+CGG | + | chr1_2:6134342-6134361 | None:intergenic | 35.0% |
| GGACTTGAAAAGTAATGTAC+AGG | + | chr1_2:6134422-6134441 | None:intergenic | 35.0% | |
| !!! | TTTTCAAGTCCCAAGTCTTA+TGG | - | chr1_2:6134431-6134450 | Msa0051960:intron | 35.0% |
| TTTGCATGACCATAAGACTT+GGG | + | chr1_2:6134443-6134462 | None:intergenic | 35.0% | |
| GGTCATGCAAACAATGAAAA+TGG | - | chr1_2:6134452-6134471 | Msa0051960:intron | 35.0% | |
| !! | TTCTTTCCACTTTTCACATC+CGG | + | chr1_2:6134485-6134504 | None:intergenic | 35.0% |
| GCAAAGAACATAAAAAGTCG+CGG | + | chr1_2:6134527-6134546 | None:intergenic | 35.0% | |
| TGTCCTCAAAAATCACATAG+TGG | + | chr1_2:6134728-6134747 | None:intergenic | 35.0% | |
| !! | CTATGTGATTTTTGAGGACA+TGG | - | chr1_2:6134728-6134747 | Msa0051960:intron | 35.0% |
| AGAACATACCCTGATTAAGC+AGG | + | chr1_2:6130754-6130773 | None:intergenic | 40.0% | |
| TGTTGCAGGGAAAATTCTTC+AGG | + | chr1_2:6131141-6131160 | None:intergenic | 40.0% | |
| ! | TGAAGAATTTTCCCTGCAAC+AGG | - | chr1_2:6131140-6131159 | Msa0051960:CDS | 40.0% |
| TTGTCTTCAACTTCCTCCAT+TGG | + | chr1_2:6131593-6131612 | None:intergenic | 40.0% | |
| TCAACATTTCTTGAGGAGGT+TGG | + | chr1_2:6131617-6131636 | None:intergenic | 40.0% | |
| TGGTTCAACATTTCTTGAGG+AGG | + | chr1_2:6131621-6131640 | None:intergenic | 40.0% | |
| ATGGAAGAGTCATTATCGGT+TGG | + | chr1_2:6131692-6131711 | None:intergenic | 40.0% | |
| GAAACAGAAGAAAACCACCT+AGG | - | chr1_2:6131896-6131915 | Msa0051960:CDS | 40.0% | |
| CAACTCTTCTGTTACAGAAG+AGG | + | chr1_2:6132032-6132051 | None:intergenic | 40.0% | |
| ! | GCATCAATAACTTCGGTTTG+AGG | + | chr1_2:6132186-6132205 | None:intergenic | 40.0% |
| TACATGAACTTCAGCATCTG+AGG | + | chr1_2:6132232-6132251 | None:intergenic | 40.0% | |
| TGTAACAGAACAAAGTCACC+AGG | - | chr1_2:6132248-6132267 | Msa0051960:CDS | 40.0% | |
| TGTTCAGAATCTGTAACCAC+AGG | + | chr1_2:6132276-6132295 | None:intergenic | 40.0% | |
| AAGATTCCTGATGTTGCTGA+TGG | - | chr1_2:6132447-6132466 | Msa0051960:CDS | 40.0% | |
| !! | GAAGCTGTTTCTAAGTTTGG+AGG | - | chr1_2:6132555-6132574 | Msa0051960:CDS | 40.0% |
| AGTTTGGAGGAATTGTCGAT+TGG | - | chr1_2:6132568-6132587 | Msa0051960:CDS | 40.0% | |
| AACTAAAACTGAGCCTAGAG+AGG | - | chr1_2:6132878-6132897 | Msa0051960:intron | 40.0% | |
| ACTAAAACTGAGCCTAGAGA+GGG | - | chr1_2:6132879-6132898 | Msa0051960:intron | 40.0% | |
| AAAGCTCAGAGTGGAAGAAA+TGG | - | chr1_2:6132945-6132964 | Msa0051960:CDS | 40.0% | |
| CACCGATGTTAACTCTGTAA+TGG | + | chr1_2:6133046-6133065 | None:intergenic | 40.0% | |
| ATCGAAGCAAGTGGAAAAGA+CGG | - | chr1_2:6133158-6133177 | Msa0051960:CDS | 40.0% | |
| GATTGCCACAAAAGAGTCTT+TGG | - | chr1_2:6133203-6133222 | Msa0051960:CDS | 40.0% | |
| ! | GGATTCCAAAGACTCTTTTG+TGG | + | chr1_2:6133211-6133230 | None:intergenic | 40.0% |
| TTCCATATGTGCAGAATGTG+CGG | + | chr1_2:6133232-6133251 | None:intergenic | 40.0% | |
| GAAGCAGAAGAACACAGAAT+AGG | - | chr1_2:6133249-6133268 | Msa0051960:CDS | 40.0% | |
| ACACAGAATAGGAACAGTCA+TGG | - | chr1_2:6133260-6133279 | Msa0051960:CDS | 40.0% | |
| AAGATTCTCTCAATTGGGAG+AGG | - | chr1_2:6133292-6133311 | Msa0051960:CDS | 40.0% | |
| AGATTCTCTCAATTGGGAGA+GGG | - | chr1_2:6133293-6133312 | Msa0051960:CDS | 40.0% | |
| CATAGAGAAAGCTACTTCTG+AGG | - | chr1_2:6133569-6133588 | Msa0051960:CDS | 40.0% | |
| ! | TGAAGTGCTTAGGAGAGTAA+AGG | - | chr1_2:6133857-6133876 | Msa0051960:CDS | 40.0% |
| AGCCAATTCGAGAATTGCAA+CGG | - | chr1_2:6134118-6134137 | Msa0051960:intron | 40.0% | |
| GGAGACTGAATTGAAAACCA+TGG | - | chr1_2:6134166-6134185 | Msa0051960:intron | 40.0% | |
| TGGATAAATCTGAGAAGGCA+AGG | - | chr1_2:6134249-6134268 | Msa0051960:intron | 40.0% | |
| GGATAAATCTGAGAAGGCAA+GGG | - | chr1_2:6134250-6134269 | Msa0051960:intron | 40.0% | |
| AAGGCAAGGGAAGGAAAATT+AGG | - | chr1_2:6134263-6134282 | Msa0051960:intron | 40.0% | |
| GTTTGCATGACCATAAGACT+TGG | + | chr1_2:6134444-6134463 | None:intergenic | 40.0% | |
| CAATGAAAATGGATCCTCAC+CGG | - | chr1_2:6134463-6134482 | Msa0051960:intron | 40.0% | |
| AAAGCACATCCAACTCATTC+AGG | - | chr1_2:6134554-6134573 | Msa0051960:intron | 40.0% | |
| AAGCACATCCAACTCATTCA+GGG | - | chr1_2:6134555-6134574 | Msa0051960:intron | 40.0% | |
| GGAATTAAGTTCATCACCCT+TGG | - | chr1_2:6134749-6134768 | Msa0051960:intron | 40.0% | |
| GACATGCAAAGAGTGGACAA+GGG | + | chr1_2:6130894-6130913 | None:intergenic | 45.0% | |
| CAACATGGACATGCAAAGAG+TGG | + | chr1_2:6130901-6130920 | None:intergenic | 45.0% | |
| TTGAGATGTCTCCTGTTGCA+GGG | + | chr1_2:6131154-6131173 | None:intergenic | 45.0% | |
| !! | TGAGTTGATGGAAGCTTCGA+TGG | + | chr1_2:6131711-6131730 | None:intergenic | 45.0% |
| AAGTTCAGAATCGGCAGCTA+TGG | + | chr1_2:6131924-6131943 | None:intergenic | 45.0% | |
| GAGTTGCAGATTGACCCTAA+AGG | - | chr1_2:6132046-6132065 | Msa0051960:CDS | 45.0% | |
| ! | AACTTCAGCATCTGAGGTTG+AGG | + | chr1_2:6132226-6132245 | None:intergenic | 45.0% |
| AATCTGTAACCACAGGTTCC+TGG | + | chr1_2:6132269-6132288 | None:intergenic | 45.0% | |
| GTGAACATGCATAAGGATGG+TGG | - | chr1_2:6132315-6132334 | Msa0051960:CDS | 45.0% | |
| GATCTAACGGCTTCATCTTC+TGG | - | chr1_2:6132369-6132388 | Msa0051960:CDS | 45.0% | |
| ACACTTCCATCAGCAACATC+AGG | + | chr1_2:6132456-6132475 | None:intergenic | 45.0% | |
| AGCTCCATTCGAATCTGTCA+AGG | - | chr1_2:6132533-6132552 | Msa0051960:CDS | 45.0% | |
| GCTTCCTTGACAGATTCGAA+TGG | + | chr1_2:6132540-6132559 | None:intergenic | 45.0% | |
| ! | TGGAGGAATTGTCGATTGGA+AGG | - | chr1_2:6132572-6132591 | Msa0051960:CDS | 45.0% |
| TCCGGAGTACAGGAAAAGAT+CGG | - | chr1_2:6132789-6132808 | Msa0051960:intron | 45.0% | |
| ! | TCCGATCTTTTCCTGTACTC+CGG | + | chr1_2:6132793-6132812 | None:intergenic | 45.0% |
| ! | TGTCAAGCTCCTGAAGTACT+TGG | + | chr1_2:6132837-6132856 | None:intergenic | 45.0% |
| !! | AAACCGAAGAGCATCAAGCA+AGG | - | chr1_2:6132905-6132924 | Msa0051960:intron | 45.0% |
| TTGCCTTGCTTGATGCTCTT+CGG | + | chr1_2:6132911-6132930 | None:intergenic | 45.0% | |
| AGAACTTGCAAAGCTCAGAG+TGG | - | chr1_2:6132936-6132955 | Msa0051960:CDS | 45.0% | |
| AGAGTGGAAGAAATGGAGCA+AGG | - | chr1_2:6132952-6132971 | Msa0051960:CDS | 45.0% | |
| TATTGCCGAAGATTCCAGTG+TGG | - | chr1_2:6132975-6132994 | Msa0051960:CDS | 45.0% | |
| ATCCGCACATTCTGCACATA+TGG | - | chr1_2:6133227-6133246 | Msa0051960:CDS | 45.0% | |
| TCAAACCAAGAAGGAGACGA+TGG | - | chr1_2:6133456-6133475 | Msa0051960:intron | 45.0% | |
| AATGCAAGCAGCAGTTGAGT+CGG | - | chr1_2:6133515-6133534 | Msa0051960:CDS | 45.0% | |
| AATCATCGCTTGCCTCGATT+AGG | - | chr1_2:6133646-6133665 | Msa0051960:CDS | 45.0% | |
| GATTAGGCAAAGAGAGGGAA+TGG | - | chr1_2:6133662-6133681 | Msa0051960:CDS | 45.0% | |
| GATAGACGCAACTGTAATCG+AGG | + | chr1_2:6133688-6133707 | None:intergenic | 45.0% | |
| GACGCTTCTTGAAGCTTCTT+TGG | + | chr1_2:6133795-6133814 | None:intergenic | 45.0% | |
| ! | GAGAAGCTTGTGAAGTGCTT+AGG | - | chr1_2:6133847-6133866 | Msa0051960:CDS | 45.0% |
| AGTGCTTAGGAGAGTAAAGG+AGG | - | chr1_2:6133860-6133879 | Msa0051960:CDS | 45.0% | |
| AAGCTGCAAGAGCTTCTGAA+AGG | - | chr1_2:6133952-6133971 | Msa0051960:five_prime_UTR | 45.0% | |
| ! | TGCAAGAGCTTCTGAAAGGT+TGG | - | chr1_2:6133956-6133975 | Msa0051960:intron | 45.0% |
| TGCCGTTGCAATTCTCGAAT+TGG | + | chr1_2:6134123-6134142 | None:intergenic | 45.0% | |
| AAATCTGAGAAGGCAAGGGA+AGG | - | chr1_2:6134254-6134273 | Msa0051960:intron | 45.0% | |
| AGAAAGTGGAGAGCAGAACA+TGG | - | chr1_2:6134302-6134321 | Msa0051960:five_prime_UTR | 45.0% | |
| AGTGACTACCCTGAATGAGT+TGG | + | chr1_2:6134566-6134585 | None:intergenic | 45.0% | |
| TGCAAAGAGTGGACAAGGGA+AGG | + | chr1_2:6130890-6130909 | None:intergenic | 50.0% | |
| GGACATGCAAAGAGTGGACA+AGG | + | chr1_2:6130895-6130914 | None:intergenic | 50.0% | |
| GTTGAGATGTCTCCTGTTGC+AGG | + | chr1_2:6131155-6131174 | None:intergenic | 50.0% | |
| ! | GGGGCATCTGCTAGTGAATT+TGG | + | chr1_2:6131641-6131660 | None:intergenic | 50.0% |
| ACAAAGTCACCAGGAACCTG+TGG | - | chr1_2:6132257-6132276 | Msa0051960:CDS | 50.0% | |
| TCATCGAATGATAGCCGTCG+AGG | - | chr1_2:6132596-6132615 | Msa0051960:CDS | 50.0% | |
| GGAGTACAGGAAAAGATCGG+AGG | - | chr1_2:6132792-6132811 | Msa0051960:intron | 50.0% | |
| AACTCGAGGTTGCCAAAGCA+AGG | - | chr1_2:6133010-6133029 | Msa0051960:CDS | 50.0% | |
| GGCACTCGTATACCTTGCTT+TGG | + | chr1_2:6133025-6133044 | None:intergenic | 50.0% | |
| CGAGTTAGATTCGTTGCGTG+TGG | - | chr1_2:6133071-6133090 | Msa0051960:CDS | 50.0% | |
| CGATGCAGCAACAGCATCTT+CGG | + | chr1_2:6133142-6133161 | None:intergenic | 50.0% | |
| TGTTGCTGCATCGAAGCAAG+TGG | - | chr1_2:6133149-6133168 | Msa0051960:CDS | 50.0% | |
| AGACTCCATCGTCTCCTTCT+TGG | + | chr1_2:6133464-6133483 | None:intergenic | 50.0% | |
| AGGAGACGATGGAGTCTCAA+AGG | - | chr1_2:6133467-6133486 | Msa0051960:CDS | 50.0% | |
| TGGAGTCTCAAAGGAGCAAC+TGG | - | chr1_2:6133476-6133495 | Msa0051960:CDS | 50.0% | |
| AGCAGTTGAGTCGGCCAAAA+AGG | - | chr1_2:6133524-6133543 | Msa0051960:CDS | 50.0% | |
| TGCCTCGATTAGGCAAAGAG+AGG | - | chr1_2:6133656-6133675 | Msa0051960:CDS | 50.0% | |
| GCCTCGATTAGGCAAAGAGA+GGG | - | chr1_2:6133657-6133676 | Msa0051960:CDS | 50.0% | |
| TCCCTCTCTTTGCCTAATCG+AGG | + | chr1_2:6133661-6133680 | None:intergenic | 50.0% | |
| GAAGCTTCTTTGGCAGCTCA+AGG | + | chr1_2:6133785-6133804 | None:intergenic | 50.0% | |
| !! | GCTTCAAGAAGCGTCTGAAG+AGG | - | chr1_2:6133800-6133819 | Msa0051960:CDS | 50.0% |
| AGCGTCTGAAGAGGCGAATA+TGG | - | chr1_2:6133809-6133828 | Msa0051960:CDS | 50.0% | |
| AGCTTCTCGAGCAAGCAAGT+TGG | + | chr1_2:6133835-6133854 | None:intergenic | 50.0% | |
| CATTGTACTAGCACCAGCCT+TGG | + | chr1_2:6133898-6133917 | None:intergenic | 50.0% | |
| AGCATTGCAAGAGAGCGAGT+CGG | - | chr1_2:6133995-6134014 | Msa0051960:intron | 50.0% | |
| GGAGAGCAGAACATGGACAA+CGG | - | chr1_2:6134309-6134328 | Msa0051960:five_prime_UTR | 50.0% | |
| CATGGACAACGGAGAAAAGC+CGG | - | chr1_2:6134320-6134339 | Msa0051960:five_prime_UTR | 50.0% | |
| CGGAGAAAAGCCGGTGAAAT+AGG | - | chr1_2:6134329-6134348 | Msa0051960:five_prime_UTR | 50.0% | |
| TCCTCACCGGATGTGAAAAG+TGG | - | chr1_2:6134476-6134495 | Msa0051960:intron | 50.0% | |
| !! | TCCACTTTTCACATCCGGTG+AGG | + | chr1_2:6134480-6134499 | None:intergenic | 50.0% |
| AATCGGCAGCTATGGCTCCT+AGG | + | chr1_2:6131916-6131935 | None:intergenic | 55.0% | |
| ACGAGGAGATTCCGGAGTAC+AGG | - | chr1_2:6132779-6132798 | Msa0051960:intron | 55.0% | |
| ! | CTTCGGTTTGTGCCCTCTCT+AGG | + | chr1_2:6132894-6132913 | None:intergenic | 55.0% |
| GGCTGCCACACTGGAATCTT+CGG | + | chr1_2:6132983-6133002 | None:intergenic | 55.0% | |
| AGATTCCAGTGTGGCAGCCA+AGG | - | chr1_2:6132984-6133003 | Msa0051960:CDS | 55.0% | |
| GGAGGAAGCAGAACAAGCCA+AGG | - | chr1_2:6133878-6133897 | Msa0051960:CDS | 55.0% | |
| GAAGCAGAACAAGCCAAGGC+TGG | - | chr1_2:6133882-6133901 | Msa0051960:CDS | 55.0% | |
| CGGCAGCTATGGCTCCTAGG+TGG | + | chr1_2:6131913-6131932 | None:intergenic | 65.0% | |
| TTGCGCCTTGGCTGCCACAC+TGG | + | chr1_2:6132992-6133011 | None:intergenic | 65.0% | |
| ! | GGCAACCTCGAGTTGCGCCT+TGG | + | chr1_2:6133004-6133023 | None:intergenic | 65.0% |
| GGCAGCCAAGGCGCAACTCG+AGG | - | chr1_2:6132996-6133015 | Msa0051960:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 6130700 | 6134834 | 6130700 | ID=Msa0051960;Name=Msa0051960 |
| chr1_2 | mRNA | 6130700 | 6134834 | 6130700 | ID=Msa0051960-mRNA-1;Parent=Msa0051960;Name=Msa0051960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=198|0.75|0.8|1|0.5|0.4|5|254|924 |
| chr1_2 | exon | 6130700 | 6132792 | 6130700 | ID=Msa0051960-mRNA-1:exon:1975;Parent=Msa0051960-mRNA-1 |
| chr1_2 | exon | 6132917 | 6133377 | 6132917 | ID=Msa0051960-mRNA-1:exon:1974;Parent=Msa0051960-mRNA-1 |
| chr1_2 | exon | 6133467 | 6133974 | 6133467 | ID=Msa0051960-mRNA-1:exon:1973;Parent=Msa0051960-mRNA-1 |
| chr1_2 | exon | 6134290 | 6134389 | 6134290 | ID=Msa0051960-mRNA-1:exon:1972;Parent=Msa0051960-mRNA-1 |
| chr1_2 | exon | 6134770 | 6134834 | 6134770 | ID=Msa0051960-mRNA-1:exon:1971;Parent=Msa0051960-mRNA-1 |
| chr1_2 | five_prime_UTR | 6134770 | 6134834 | 6134770 | ID=Msa0051960-mRNA-1:five_prime_utr;Parent=Msa0051960-mRNA-1 |
| chr1_2 | five_prime_UTR | 6134290 | 6134389 | 6134290 | ID=Msa0051960-mRNA-1:five_prime_utr;Parent=Msa0051960-mRNA-1 |
| chr1_2 | five_prime_UTR | 6133942 | 6133974 | 6133942 | ID=Msa0051960-mRNA-1:five_prime_utr;Parent=Msa0051960-mRNA-1 |
| chr1_2 | CDS | 6133467 | 6133941 | 6133467 | ID=Msa0051960-mRNA-1:cds;Parent=Msa0051960-mRNA-1 |
| chr1_2 | CDS | 6132917 | 6133377 | 6132917 | ID=Msa0051960-mRNA-1:cds;Parent=Msa0051960-mRNA-1 |
| chr1_2 | CDS | 6130954 | 6132792 | 6130954 | ID=Msa0051960-mRNA-1:cds;Parent=Msa0051960-mRNA-1 |
| chr1_2 | three_prime_UTR | 6130700 | 6130953 | 6130700 | ID=Msa0051960-mRNA-1:three_prime_utr;Parent=Msa0051960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
