Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030810 | XP_003624486.1 | 98.671 | 301 | 3 | 1 | 1 | 300 | 1 | 301 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030810 | sp|Q9SCU0|SDR2A_ARATH | 48.889 | 270 | 127 | 5 | 32 | 290 | 30 | 299 | 2.50e-76 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030810 | Q2HUL4 | 98.671 | 301 | 3 | 1 | 1 | 300 | 1 | 301 | 0.0 | 600 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030700 | Msa1030810 | 0.841673 | 4.120705e-58 | -8.615850e-47 |
| Msa0035020 | Msa1030810 | 0.801819 | 7.522277e-49 | -8.615850e-47 |
| Msa0051040 | Msa1030810 | 0.807432 | 5.070404e-50 | -8.615850e-47 |
| Msa0061220 | Msa1030810 | 0.808310 | 3.297316e-50 | -8.615850e-47 |
| Msa0078120 | Msa1030810 | 0.837246 | 5.820947e-57 | -8.615850e-47 |
| Msa0081020 | Msa1030810 | 0.804579 | 2.018641e-49 | -8.615850e-47 |
| Msa0090150 | Msa1030810 | 0.814813 | 1.272446e-51 | -8.615850e-47 |
| Msa0090380 | Msa1030810 | 0.831610 | 1.514333e-55 | -8.615850e-47 |
| Msa0101860 | Msa1030810 | 0.808548 | 2.933805e-50 | -8.615850e-47 |
| Msa0614920 | Msa1030810 | 0.802743 | 4.852567e-49 | -8.615850e-47 |
| Msa0625190 | Msa1030810 | 0.804741 | 1.867128e-49 | -8.615850e-47 |
| Msa0632650 | Msa1030810 | 0.829879 | 4.020883e-55 | -8.615850e-47 |
| Msa0635270 | Msa1030810 | 0.850822 | 1.324685e-60 | -8.615850e-47 |
| Msa0641130 | Msa1030810 | 0.857007 | 2.187947e-62 | -8.615850e-47 |
| Msa0646240 | Msa1030810 | 0.827172 | 1.811270e-54 | -8.615850e-47 |
| Msa0653670 | Msa1030810 | 0.814240 | 1.704364e-51 | -8.615850e-47 |
| Msa0658190 | Msa1030810 | 0.807817 | 4.198906e-50 | -8.615850e-47 |
| Msa0708310 | Msa1030810 | 0.835048 | 2.104437e-56 | -8.615850e-47 |
| Msa0709270 | Msa1030810 | 0.811033 | 8.572418e-51 | -8.615850e-47 |
| Msa0711150 | Msa1030810 | 0.805328 | 1.407390e-49 | -8.615850e-47 |
| Msa0733010 | Msa1030810 | 0.813565 | 2.399982e-51 | -8.615850e-47 |
| Msa0733860 | Msa1030810 | 0.801353 | 9.373548e-49 | -8.615850e-47 |
| Msa0743870 | Msa1030810 | 0.817185 | 3.759792e-52 | -8.615850e-47 |
| Msa0743930 | Msa1030810 | 0.826751 | 2.284423e-54 | -8.615850e-47 |
| Msa0748150 | Msa1030810 | 0.814174 | 1.762125e-51 | -8.615850e-47 |
| Msa0752600 | Msa1030810 | 0.842186 | 3.015874e-58 | -8.615850e-47 |
| Msa0772740 | Msa1030810 | 0.816559 | 5.194745e-52 | -8.615850e-47 |
| Msa0812530 | Msa1030810 | 0.806022 | 1.006322e-49 | -8.615850e-47 |
| Msa0816130 | Msa1030810 | 0.808203 | 3.475765e-50 | -8.615850e-47 |
| Msa0829650 | Msa1030810 | 0.810718 | 1.002556e-50 | -8.615850e-47 |
| Msa0137800 | Msa1030810 | 0.808860 | 2.515979e-50 | -8.615850e-47 |
| Msa0137860 | Msa1030810 | 0.828873 | 7.058845e-55 | -8.615850e-47 |
| Msa0160960 | Msa1030810 | 0.819003 | 1.458840e-52 | -8.615850e-47 |
| Msa0179270 | Msa1030810 | 0.805224 | 1.480301e-49 | -8.615850e-47 |
| Msa0224130 | Msa1030810 | 0.810181 | 1.309782e-50 | -8.615850e-47 |
| Msa0232020 | Msa1030810 | 0.809663 | 1.693193e-50 | -8.615850e-47 |
| Msa0372300 | Msa1030810 | 0.800172 | 1.632517e-48 | -8.615850e-47 |
| Msa0380930 | Msa1030810 | 0.805105 | 1.567623e-49 | -8.615850e-47 |
| Msa0394120 | Msa1030810 | 0.814729 | 1.328107e-51 | -8.615850e-47 |
| Msa0432160 | Msa1030810 | 0.812455 | 4.204128e-51 | -8.615850e-47 |
| Msa0445630 | Msa1030810 | 0.802382 | 5.759796e-49 | -8.615850e-47 |
| Msa0476680 | Msa1030810 | 0.824470 | 7.934346e-54 | -8.615850e-47 |
| Msa0999680 | Msa1030810 | 0.824951 | 6.111101e-54 | -8.615850e-47 |
| Msa1012800 | Msa1030810 | 0.807792 | 4.251822e-50 | -8.615850e-47 |
| Msa1026480 | Msa1030810 | 0.830599 | 2.681468e-55 | -8.615850e-47 |
| Msa1030810 | Msa1037780 | 0.808696 | 2.728596e-50 | -8.615850e-47 |
| Msa1030810 | Msa1038880 | 0.803873 | 2.831464e-49 | -8.615850e-47 |
| Msa1030810 | Msa1048220 | 0.821761 | 3.400221e-53 | -8.615850e-47 |
| Msa1030810 | Msa1058230 | 0.801642 | 8.179051e-49 | -8.615850e-47 |
| Msa1030810 | Msa1069890 | 0.977470 | 7.600288e-144 | -8.615850e-47 |
| Msa1030810 | Msa1089190 | 0.807288 | 5.438864e-50 | -8.615850e-47 |
| Msa1030810 | Msa1119920 | 0.913427 | 6.228968e-84 | -8.615850e-47 |
| Msa1030810 | Msa1132470 | 0.824642 | 7.226639e-54 | -8.615850e-47 |
| Msa1030810 | Msa1157670 | 0.881126 | 3.108584e-70 | -8.615850e-47 |
| Msa1030810 | Msa1175100 | 0.800155 | 1.645699e-48 | -8.615850e-47 |
| Msa1030810 | Msa1190920 | 0.804902 | 1.728545e-49 | -8.615850e-47 |
| Msa1030810 | Msa1208990 | 0.801850 | 7.411246e-49 | -8.615850e-47 |
| Msa1030810 | Msa1211230 | -0.822907 | 1.842878e-53 | -8.615850e-47 |
| Msa1030810 | Msa1212050 | 0.819832 | 9.441933e-53 | -8.615850e-47 |
| Msa1030810 | Msa1212130 | 0.843990 | 9.975027e-59 | -8.615850e-47 |
| Msa1030810 | Msa1226460 | 0.811631 | 6.356781e-51 | -8.615850e-47 |
| Msa1030810 | Msa1238170 | 0.803644 | 3.159306e-49 | -8.615850e-47 |
| Msa1030810 | Msa1238600 | 0.829686 | 4.481396e-55 | -8.615850e-47 |
| Msa1030810 | Msa1238660 | 0.818700 | 1.709161e-52 | -8.615850e-47 |
| Msa1030810 | Msa1256060 | 0.880726 | 4.329597e-70 | -8.615850e-47 |
| Msa1030810 | Msa1259860 | 0.853369 | 2.500797e-61 | -8.615850e-47 |
| Msa1030810 | Msa1296240 | 0.808785 | 2.611119e-50 | -8.615850e-47 |
| Msa1030810 | Msa1299400 | -0.835513 | 1.606504e-56 | -8.615850e-47 |
| Msa1030810 | Msa1319560 | 0.834828 | 2.392041e-56 | -8.615850e-47 |
| Msa1030810 | Msa1325410 | -0.804914 | 1.718092e-49 | -8.615850e-47 |
| Msa1030810 | Msa1331050 | -0.820814 | 5.621405e-53 | -8.615850e-47 |
| Msa1030810 | Msa1341840 | 0.811513 | 6.742892e-51 | -8.615850e-47 |
| Msa1030810 | Msa1353890 | 0.831891 | 1.290839e-55 | -8.615850e-47 |
| Msa1030810 | Msa1364080 | 0.813314 | 2.724863e-51 | -8.615850e-47 |
| Msa1030810 | Msa1369920 | -0.808061 | 3.727228e-50 | -8.615850e-47 |
| Msa1030810 | Msa1380220 | 0.819988 | 8.695658e-53 | -8.615850e-47 |
| Msa1030810 | Msa1386890 | 0.840760 | 7.161832e-58 | -8.615850e-47 |
| Msa1030810 | Msa1390290 | 0.810684 | 1.019774e-50 | -8.615850e-47 |
| Msa1030810 | Msa1395110 | 0.802359 | 5.822955e-49 | -8.615850e-47 |
| Msa1030810 | Msa1398900 | 0.805865 | 1.086027e-49 | -8.615850e-47 |
| Msa1030810 | Msa1400930 | 0.800304 | 1.534993e-48 | -8.615850e-47 |
| Msa1030810 | Msa1428900 | 0.816918 | 4.316290e-52 | -8.615850e-47 |
| Msa1030810 | Msa1433410 | 0.832076 | 1.161606e-55 | -8.615850e-47 |
| Msa1030810 | Msa1442920 | 0.841983 | 3.412674e-58 | -8.615850e-47 |
| Msa1030810 | Msa1443620 | 0.814027 | 1.898872e-51 | -8.615850e-47 |
| Msa1030810 | Msa1454570 | 0.830250 | 3.263974e-55 | -8.615850e-47 |
| Msa1030810 | Msa1458680 | 0.841873 | 3.648139e-58 | -8.615850e-47 |
| Msa1030810 | Msa1459100 | 0.801098 | 1.057048e-48 | -8.615850e-47 |
| Msa0264830 | Msa1030810 | 0.805627 | 1.218660e-49 | -8.615850e-47 |
| Msa0265270 | Msa1030810 | 0.811164 | 8.028491e-51 | -8.615850e-47 |
| Msa0267790 | Msa1030810 | 0.824088 | 9.753591e-54 | -8.615850e-47 |
| Msa0282780 | Msa1030810 | 0.822039 | 2.930957e-53 | -8.615850e-47 |
| Msa0287870 | Msa1030810 | 0.841167 | 5.598348e-58 | -8.615850e-47 |
| Msa0306610 | Msa1030810 | 0.800166 | 1.637272e-48 | -8.615850e-47 |
| Msa0317970 | Msa1030810 | 0.804293 | 2.315791e-49 | -8.615850e-47 |
| Msa0340340 | Msa1030810 | 0.809065 | 2.274481e-50 | -8.615850e-47 |
| Msa0344880 | Msa1030810 | 0.821496 | 3.915662e-53 | -8.615850e-47 |
| Msa0347470 | Msa1030810 | 0.809080 | 2.257848e-50 | -8.615850e-47 |
| Msa0355550 | Msa1030810 | 0.831098 | 2.023060e-55 | -8.615850e-47 |
| Msa0484800 | Msa1030810 | 0.840244 | 9.772705e-58 | -8.615850e-47 |
| Msa0489570 | Msa1030810 | 0.803126 | 4.045008e-49 | -8.615850e-47 |
| Msa0517270 | Msa1030810 | 0.806348 | 8.594629e-50 | -8.615850e-47 |
| Msa0521010 | Msa1030810 | 0.825614 | 4.257998e-54 | -8.615850e-47 |
| Msa0522630 | Msa1030810 | 0.816782 | 4.630874e-52 | -8.615850e-47 |
| Msa0545050 | Msa1030810 | 0.855009 | 8.410615e-62 | -8.615850e-47 |
| Msa0573890 | Msa1030810 | 0.810767 | 9.786527e-51 | -8.615850e-47 |
| Msa0574600 | Msa1030810 | 0.830910 | 2.250244e-55 | -8.615850e-47 |
| Msa0574730 | Msa1030810 | 0.815031 | 1.138420e-51 | -8.615850e-47 |
| Msa0600590 | Msa1030810 | 0.852496 | 4.442747e-61 | -8.615850e-47 |
| Msa0846860 | Msa1030810 | 0.817237 | 3.659223e-52 | -8.615850e-47 |
| Msa0863990 | Msa1030810 | 0.820051 | 8.415057e-53 | -8.615850e-47 |
| Msa0867870 | Msa1030810 | 0.811439 | 6.996602e-51 | -8.615850e-47 |
| Msa0870510 | Msa1030810 | 0.826161 | 3.157723e-54 | -8.615850e-47 |
| Msa0876930 | Msa1030810 | 0.821063 | 4.926626e-53 | -8.615850e-47 |
| Msa0879930 | Msa1030810 | 0.822982 | 1.769582e-53 | -8.615850e-47 |
| Msa0899970 | Msa1030810 | 0.809035 | 2.308371e-50 | -8.615850e-47 |
| Msa0922190 | Msa1030810 | 0.811761 | 5.954571e-51 | -8.615850e-47 |
| Msa0936060 | Msa1030810 | 0.803890 | 2.808704e-49 | -8.615850e-47 |
| Msa0945130 | Msa1030810 | 0.825178 | 5.401983e-54 | -8.615850e-47 |
| Msa0960810 | Msa1030810 | 0.811383 | 7.195246e-51 | -8.615850e-47 |
| Msa0964050 | Msa1030810 | 0.815655 | 8.271149e-52 | -8.615850e-47 |
| Msa0965080 | Msa1030810 | 0.817696 | 2.884665e-52 | -8.615850e-47 |
| Msa0965290 | Msa1030810 | 0.824533 | 7.667920e-54 | -8.615850e-47 |
| Msa0972960 | Msa1030810 | 0.816628 | 5.013050e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030810 | MtrunA17_Chr7g0252031 | 98.671 | 301 | 3 | 1 | 1 | 300 | 1 | 301 | 0.0 | 600 |
| Msa1030810 | MtrunA17_Chr7g0268591 | 56.884 | 276 | 118 | 1 | 23 | 298 | 22 | 296 | 2.23e-112 | 327 |
| Msa1030810 | MtrunA17_Chr7g0244061 | 49.265 | 272 | 125 | 4 | 32 | 290 | 27 | 298 | 1.24e-82 | 251 |
| Msa1030810 | MtrunA17_Chr4g0025971 | 50.373 | 268 | 122 | 5 | 32 | 298 | 12 | 269 | 1.96e-77 | 237 |
| Msa1030810 | MtrunA17_Chr4g0026001 | 51.953 | 256 | 113 | 5 | 32 | 286 | 12 | 258 | 2.14e-77 | 237 |
| Msa1030810 | MtrunA17_Chr4g0044111 | 50.190 | 263 | 123 | 5 | 32 | 293 | 11 | 266 | 1.02e-71 | 222 |
| Msa1030810 | MtrunA17_Chr7g0266981 | 50.190 | 263 | 123 | 5 | 32 | 293 | 11 | 266 | 1.03e-71 | 222 |
| Msa1030810 | MtrunA17_Chr4g0025981 | 49.231 | 260 | 121 | 6 | 35 | 293 | 42 | 291 | 7.69e-71 | 222 |
| Msa1030810 | MtrunA17_Chr7g0270451 | 47.388 | 268 | 132 | 4 | 32 | 297 | 4 | 264 | 2.48e-70 | 218 |
| Msa1030810 | MtrunA17_Chr4g0044131 | 44.318 | 264 | 140 | 3 | 31 | 293 | 5 | 262 | 8.34e-70 | 217 |
| Msa1030810 | MtrunA17_Chr7g0270441 | 45.594 | 261 | 134 | 4 | 32 | 290 | 4 | 258 | 7.70e-69 | 214 |
| Msa1030810 | MtrunA17_Chr7g0266891 | 49.425 | 261 | 124 | 5 | 34 | 293 | 7 | 260 | 3.39e-68 | 213 |
| Msa1030810 | MtrunA17_Chr4g0040371 | 45.956 | 272 | 136 | 7 | 32 | 296 | 17 | 284 | 9.05e-68 | 213 |
| Msa1030810 | MtrunA17_Chr2g0324021 | 45.113 | 266 | 136 | 7 | 32 | 295 | 4 | 261 | 1.71e-67 | 211 |
| Msa1030810 | MtrunA17_Chr3g0084871 | 46.970 | 264 | 124 | 4 | 32 | 286 | 14 | 270 | 3.83e-66 | 208 |
| Msa1030810 | MtrunA17_Chr6g0459261 | 41.797 | 256 | 140 | 5 | 33 | 285 | 24 | 273 | 9.60e-60 | 192 |
| Msa1030810 | MtrunA17_Chr6g0459301 | 41.016 | 256 | 142 | 5 | 33 | 285 | 13 | 262 | 2.68e-59 | 190 |
| Msa1030810 | MtrunA17_Chr7g0267001 | 39.773 | 264 | 134 | 3 | 31 | 293 | 5 | 244 | 3.00e-58 | 187 |
| Msa1030810 | MtrunA17_Chr6g0459281 | 40.076 | 262 | 148 | 5 | 27 | 285 | 6 | 261 | 4.87e-56 | 182 |
| Msa1030810 | MtrunA17_Chr6g0459351 | 40.310 | 258 | 141 | 6 | 33 | 285 | 12 | 261 | 8.97e-56 | 181 |
| Msa1030810 | MtrunA17_Chr7g0267011 | 49.474 | 190 | 94 | 2 | 31 | 219 | 5 | 193 | 2.09e-54 | 175 |
| Msa1030810 | MtrunA17_Chr6g0459331 | 40.000 | 260 | 145 | 6 | 33 | 288 | 12 | 264 | 3.49e-53 | 174 |
| Msa1030810 | MtrunA17_Chr6g0459271 | 39.453 | 256 | 146 | 5 | 33 | 285 | 12 | 261 | 6.98e-52 | 171 |
| Msa1030810 | MtrunA17_Chr7g0266991 | 43.830 | 235 | 110 | 5 | 32 | 266 | 23 | 235 | 8.99e-45 | 152 |
| Msa1030810 | MtrunA17_Chr3g0142651 | 54.135 | 133 | 60 | 1 | 114 | 246 | 1 | 132 | 1.04e-43 | 145 |
| Msa1030810 | MtrunA17_Chr6g0463951 | 46.067 | 178 | 88 | 4 | 114 | 290 | 1 | 171 | 1.77e-40 | 139 |
| Msa1030810 | MtrunA17_Chr4g0044121 | 46.667 | 180 | 89 | 4 | 114 | 293 | 1 | 173 | 7.11e-38 | 132 |
| Msa1030810 | MtrunA17_Chr7g0270471 | 46.053 | 152 | 76 | 3 | 141 | 291 | 1 | 147 | 1.59e-34 | 122 |
| Msa1030810 | MtrunA17_Chr3g0122901 | 31.274 | 259 | 160 | 6 | 32 | 285 | 73 | 318 | 1.50e-27 | 108 |
| Msa1030810 | MtrunA17_Chr7g0270461 | 50.980 | 102 | 49 | 1 | 23 | 123 | 35 | 136 | 3.08e-26 | 100 |
| Msa1030810 | MtrunA17_Chr4g0075531 | 29.730 | 259 | 166 | 6 | 32 | 287 | 5 | 250 | 5.24e-24 | 98.2 |
| Msa1030810 | MtrunA17_Chr3g0112151 | 29.577 | 284 | 179 | 9 | 7 | 286 | 65 | 331 | 3.82e-23 | 97.4 |
| Msa1030810 | MtrunA17_Chr3g0112171 | 30.739 | 257 | 163 | 7 | 34 | 286 | 15 | 260 | 4.27e-22 | 93.2 |
| Msa1030810 | MtrunA17_Chr3g0112141 | 30.233 | 258 | 165 | 7 | 34 | 287 | 17 | 263 | 5.43e-22 | 93.2 |
| Msa1030810 | MtrunA17_Chr3g0112261 | 30.943 | 265 | 162 | 8 | 30 | 286 | 13 | 264 | 4.59e-21 | 90.5 |
| Msa1030810 | MtrunA17_Chr7g0259521 | 28.839 | 267 | 169 | 8 | 34 | 291 | 6 | 260 | 1.21e-20 | 89.0 |
| Msa1030810 | MtrunA17_Chr7g0259531 | 29.963 | 267 | 154 | 10 | 34 | 285 | 11 | 259 | 1.40e-20 | 89.0 |
| Msa1030810 | MtrunA17_Chr4g0028911 | 29.389 | 262 | 167 | 7 | 34 | 286 | 11 | 263 | 1.90e-20 | 89.0 |
| Msa1030810 | MtrunA17_Chr1g0191751 | 28.897 | 263 | 163 | 7 | 33 | 284 | 100 | 349 | 5.15e-20 | 89.0 |
| Msa1030810 | MtrunA17_Chr4g0074511 | 29.545 | 264 | 161 | 10 | 33 | 284 | 39 | 289 | 1.37e-19 | 86.7 |
| Msa1030810 | MtrunA17_Chr4g0028921 | 29.278 | 263 | 166 | 8 | 34 | 286 | 11 | 263 | 1.58e-19 | 86.3 |
| Msa1030810 | MtrunA17_Chr7g0272961 | 28.897 | 263 | 163 | 7 | 33 | 284 | 39 | 288 | 3.39e-19 | 85.9 |
| Msa1030810 | MtrunA17_Chr1g0171831 | 27.308 | 260 | 166 | 7 | 32 | 277 | 12 | 262 | 1.22e-18 | 83.6 |
| Msa1030810 | MtrunA17_Chr7g0239511 | 30.739 | 257 | 167 | 6 | 34 | 286 | 16 | 265 | 1.68e-17 | 80.5 |
| Msa1030810 | MtrunA17_Chr4g0054341 | 30.366 | 191 | 125 | 3 | 35 | 222 | 3 | 188 | 4.54e-17 | 79.7 |
| Msa1030810 | MtrunA17_Chr1g0182511 | 28.626 | 262 | 165 | 8 | 34 | 285 | 14 | 263 | 8.98e-17 | 78.6 |
| Msa1030810 | MtrunA17_Chr7g0239491 | 28.897 | 263 | 165 | 8 | 34 | 287 | 15 | 264 | 5.25e-16 | 76.3 |
| Msa1030810 | MtrunA17_Chr7g0239481 | 29.070 | 258 | 168 | 6 | 34 | 285 | 15 | 263 | 8.04e-16 | 75.9 |
| Msa1030810 | MtrunA17_Chr3g0112271 | 27.626 | 257 | 171 | 7 | 34 | 286 | 17 | 262 | 1.99e-15 | 74.7 |
| Msa1030810 | MtrunA17_Chr8g0357481 | 28.947 | 266 | 161 | 11 | 34 | 285 | 14 | 265 | 1.24e-14 | 72.8 |
| Msa1030810 | MtrunA17_Chr7g0239501 | 27.413 | 259 | 173 | 6 | 34 | 286 | 16 | 265 | 1.43e-14 | 72.4 |
| Msa1030810 | MtrunA17_Chr4g0033091 | 31.651 | 218 | 119 | 8 | 31 | 226 | 21 | 230 | 4.42e-13 | 67.8 |
| Msa1030810 | MtrunA17_Chr7g0239451 | 27.907 | 258 | 175 | 7 | 34 | 287 | 16 | 266 | 3.36e-12 | 65.5 |
| Msa1030810 | MtrunA17_Chr7g0249571 | 26.804 | 194 | 133 | 4 | 34 | 220 | 38 | 229 | 6.53e-12 | 65.1 |
| Msa1030810 | MtrunA17_Chr4g0032181 | 27.317 | 205 | 125 | 4 | 89 | 286 | 59 | 246 | 5.45e-11 | 61.6 |
| Msa1030810 | MtrunA17_Chr4g0076931 | 30.047 | 213 | 131 | 7 | 29 | 226 | 1 | 210 | 5.95e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030810 | AT3G26760.1 | 59.197 | 299 | 118 | 2 | 1 | 295 | 1 | 299 | 1.15e-124 | 358 |
| Msa1030810 | AT3G26770.1 | 59.551 | 267 | 108 | 0 | 32 | 298 | 39 | 305 | 3.01e-118 | 342 |
| Msa1030810 | AT4G03140.1 | 55.224 | 268 | 119 | 1 | 32 | 299 | 76 | 342 | 9.92e-103 | 304 |
| Msa1030810 | AT3G51680.1 | 48.889 | 270 | 127 | 5 | 32 | 290 | 30 | 299 | 2.55e-77 | 238 |
| Msa1030810 | AT2G47120.1 | 45.725 | 269 | 131 | 6 | 31 | 297 | 3 | 258 | 5.46e-70 | 218 |
| Msa1030810 | AT2G47120.2 | 45.693 | 267 | 130 | 6 | 33 | 297 | 6 | 259 | 1.18e-69 | 217 |
| Msa1030810 | AT3G29250.3 | 42.456 | 285 | 155 | 5 | 7 | 289 | 15 | 292 | 1.95e-68 | 215 |
| Msa1030810 | AT2G47130.1 | 45.211 | 261 | 133 | 4 | 31 | 289 | 3 | 255 | 2.99e-68 | 213 |
| Msa1030810 | AT3G29260.1 | 44.828 | 261 | 134 | 4 | 31 | 289 | 3 | 255 | 1.23e-67 | 212 |
| Msa1030810 | AT2G47140.1 | 44.444 | 261 | 136 | 5 | 31 | 289 | 3 | 256 | 2.78e-67 | 211 |
| Msa1030810 | AT3G29250.2 | 44.828 | 261 | 135 | 5 | 31 | 289 | 3 | 256 | 2.01e-66 | 209 |
| Msa1030810 | AT3G29250.1 | 42.160 | 287 | 155 | 6 | 7 | 289 | 15 | 294 | 2.27e-66 | 210 |
| Msa1030810 | AT1G52340.1 | 43.071 | 267 | 133 | 4 | 32 | 286 | 16 | 275 | 1.75e-59 | 192 |
| Msa1030810 | AT3G42960.1 | 47.510 | 261 | 128 | 6 | 32 | 287 | 6 | 262 | 2.74e-59 | 191 |
| Msa1030810 | AT2G47150.1 | 31.128 | 257 | 117 | 7 | 34 | 289 | 1 | 198 | 2.96e-26 | 103 |
| Msa1030810 | AT5G18210.1 | 31.439 | 264 | 157 | 9 | 34 | 285 | 8 | 259 | 8.39e-26 | 103 |
| Msa1030810 | AT1G63380.4 | 30.075 | 266 | 161 | 8 | 34 | 286 | 19 | 272 | 2.81e-24 | 99.8 |
| Msa1030810 | AT1G63380.3 | 30.075 | 266 | 161 | 8 | 34 | 286 | 15 | 268 | 3.05e-24 | 99.8 |
| Msa1030810 | AT1G63380.2 | 30.075 | 266 | 161 | 8 | 34 | 286 | 22 | 275 | 3.60e-24 | 99.8 |
| Msa1030810 | AT1G63380.1 | 30.075 | 266 | 161 | 8 | 34 | 286 | 17 | 270 | 3.76e-24 | 99.4 |
| Msa1030810 | AT2G17845.1 | 29.658 | 263 | 164 | 6 | 34 | 284 | 47 | 300 | 3.34e-23 | 97.4 |
| Msa1030810 | AT1G62610.2 | 29.434 | 265 | 164 | 7 | 34 | 286 | 13 | 266 | 4.00e-23 | 96.7 |
| Msa1030810 | AT1G62610.1 | 29.434 | 265 | 164 | 7 | 34 | 286 | 14 | 267 | 4.55e-23 | 96.3 |
| Msa1030810 | AT1G62610.3 | 29.434 | 265 | 164 | 7 | 34 | 286 | 15 | 268 | 4.58e-23 | 96.3 |
| Msa1030810 | AT1G62610.4 | 29.434 | 265 | 164 | 7 | 34 | 286 | 19 | 272 | 4.91e-23 | 96.3 |
| Msa1030810 | AT3G55290.1 | 30.534 | 262 | 164 | 6 | 34 | 286 | 18 | 270 | 3.31e-22 | 94.4 |
| Msa1030810 | AT4G13180.1 | 30.268 | 261 | 161 | 9 | 34 | 285 | 13 | 261 | 3.33e-22 | 94.0 |
| Msa1030810 | AT3G55290.2 | 30.534 | 262 | 164 | 6 | 34 | 286 | 17 | 269 | 3.49e-22 | 94.0 |
| Msa1030810 | AT2G29150.1 | 31.818 | 264 | 163 | 11 | 34 | 293 | 16 | 266 | 4.80e-22 | 93.6 |
| Msa1030810 | AT1G24360.1 | 28.669 | 293 | 184 | 10 | 1 | 285 | 42 | 317 | 9.16e-22 | 93.6 |
| Msa1030810 | AT5G18210.2 | 31.452 | 248 | 146 | 9 | 34 | 269 | 8 | 243 | 2.59e-21 | 91.7 |
| Msa1030810 | AT3G03980.1 | 29.851 | 268 | 160 | 8 | 34 | 285 | 14 | 269 | 2.70e-21 | 91.7 |
| Msa1030810 | AT2G29340.2 | 28.788 | 264 | 172 | 7 | 34 | 293 | 7 | 258 | 1.17e-20 | 89.7 |
| Msa1030810 | AT2G29370.1 | 28.302 | 265 | 174 | 8 | 34 | 294 | 16 | 268 | 1.73e-20 | 89.4 |
| Msa1030810 | AT2G29340.1 | 28.788 | 264 | 172 | 7 | 34 | 293 | 7 | 258 | 2.01e-20 | 89.7 |
| Msa1030810 | AT5G06060.1 | 27.407 | 270 | 168 | 9 | 34 | 293 | 9 | 260 | 9.47e-20 | 87.0 |
| Msa1030810 | AT4G05530.1 | 31.439 | 264 | 155 | 10 | 32 | 287 | 7 | 252 | 2.61e-19 | 85.9 |
| Msa1030810 | AT3G04000.1 | 29.478 | 268 | 160 | 8 | 34 | 284 | 14 | 269 | 3.28e-19 | 85.9 |
| Msa1030810 | AT2G29300.1 | 27.652 | 264 | 163 | 8 | 34 | 286 | 7 | 253 | 3.48e-19 | 85.5 |
| Msa1030810 | AT2G29310.1 | 27.444 | 266 | 173 | 7 | 34 | 293 | 7 | 258 | 4.23e-19 | 85.1 |
| Msa1030810 | AT2G29300.2 | 27.652 | 264 | 163 | 8 | 34 | 286 | 7 | 253 | 6.98e-19 | 85.1 |
| Msa1030810 | AT2G29360.1 | 27.985 | 268 | 176 | 9 | 34 | 296 | 16 | 271 | 7.05e-19 | 84.7 |
| Msa1030810 | AT3G55310.1 | 29.588 | 267 | 160 | 8 | 34 | 286 | 17 | 269 | 1.20e-18 | 84.3 |
| Msa1030810 | AT3G05260.1 | 26.515 | 264 | 169 | 6 | 33 | 285 | 36 | 285 | 1.63e-18 | 84.0 |
| Msa1030810 | AT1G54870.2 | 27.652 | 264 | 165 | 8 | 33 | 284 | 83 | 332 | 1.96e-18 | 84.7 |
| Msa1030810 | AT1G54870.1 | 27.652 | 264 | 165 | 8 | 33 | 284 | 81 | 330 | 2.21e-18 | 84.3 |
| Msa1030810 | AT3G46170.1 | 28.897 | 263 | 169 | 6 | 33 | 286 | 25 | 278 | 3.66e-18 | 83.2 |
| Msa1030810 | AT2G29340.3 | 30.412 | 194 | 128 | 4 | 34 | 223 | 7 | 197 | 1.16e-17 | 80.1 |
| Msa1030810 | AT2G29340.4 | 30.412 | 194 | 128 | 4 | 34 | 223 | 7 | 197 | 1.16e-17 | 80.1 |
| Msa1030810 | AT2G29320.1 | 26.966 | 267 | 174 | 8 | 34 | 293 | 13 | 265 | 1.47e-17 | 81.3 |
| Msa1030810 | AT2G29290.2 | 28.302 | 265 | 172 | 10 | 34 | 293 | 7 | 258 | 2.67e-17 | 80.1 |
| Msa1030810 | AT1G10310.1 | 32.673 | 202 | 120 | 6 | 37 | 226 | 18 | 215 | 4.48e-17 | 79.3 |
| Msa1030810 | AT2G30670.1 | 27.273 | 264 | 176 | 8 | 34 | 293 | 7 | 258 | 1.38e-16 | 78.2 |
| Msa1030810 | AT2G29330.1 | 26.692 | 266 | 175 | 7 | 34 | 293 | 7 | 258 | 6.34e-16 | 76.3 |
| Msa1030810 | AT1G07440.1 | 25.758 | 264 | 179 | 7 | 34 | 293 | 12 | 262 | 1.80e-15 | 75.1 |
| Msa1030810 | AT2G29350.1 | 27.444 | 266 | 176 | 9 | 34 | 295 | 15 | 267 | 2.25e-15 | 75.1 |
| Msa1030810 | AT2G29260.1 | 28.996 | 269 | 172 | 10 | 34 | 297 | 68 | 322 | 2.74e-15 | 75.5 |
| Msa1030810 | AT2G29310.3 | 27.320 | 194 | 134 | 3 | 34 | 223 | 7 | 197 | 1.84e-14 | 71.2 |
| Msa1030810 | AT2G29320.3 | 27.692 | 195 | 133 | 4 | 34 | 223 | 13 | 204 | 2.91e-14 | 70.9 |
| Msa1030810 | AT2G29350.2 | 29.208 | 202 | 136 | 5 | 34 | 231 | 15 | 213 | 1.12e-13 | 69.3 |
| Msa1030810 | AT3G12800.1 | 28.364 | 275 | 170 | 10 | 34 | 294 | 10 | 271 | 6.78e-13 | 68.2 |
| Msa1030810 | AT1G49670.2 | 28.270 | 237 | 131 | 8 | 39 | 252 | 9 | 229 | 1.09e-12 | 68.9 |
| Msa1030810 | AT1G49670.1 | 28.270 | 237 | 131 | 8 | 39 | 252 | 9 | 229 | 1.27e-12 | 68.6 |
| Msa1030810 | AT2G29290.1 | 27.309 | 249 | 163 | 10 | 50 | 293 | 6 | 241 | 1.89e-12 | 66.2 |
| Msa1030810 | AT2G29310.2 | 26.033 | 242 | 160 | 6 | 51 | 286 | 22 | 250 | 1.93e-12 | 66.6 |
| Msa1030810 | AT5G65205.1 | 28.293 | 205 | 137 | 4 | 29 | 230 | 1 | 198 | 1.05e-11 | 64.7 |
| Msa1030810 | AT3G01980.1 | 24.324 | 259 | 177 | 6 | 36 | 284 | 5 | 254 | 1.43e-11 | 63.9 |
| Msa1030810 | AT3G01980.4 | 24.324 | 259 | 177 | 6 | 36 | 284 | 5 | 254 | 1.43e-11 | 63.9 |
| Msa1030810 | AT3G03330.1 | 25.888 | 197 | 132 | 4 | 34 | 220 | 41 | 233 | 1.54e-11 | 64.7 |
| Msa1030810 | AT5G10050.1 | 27.000 | 200 | 134 | 5 | 35 | 230 | 6 | 197 | 5.43e-11 | 62.4 |
| Msa1030810 | AT2G29320.2 | 25.200 | 250 | 166 | 8 | 51 | 293 | 12 | 247 | 6.58e-11 | 62.0 |
Find 108 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATTCCTTTGCAACTTT+TGG | 0.096535 | 7_1:-65060931 | None:intergenic |
| GATGGGTTGATGAGTATTTA+AGG | 0.193959 | 7_1:-65058207 | None:intergenic |
| GTTATGCTTGGTGGGATTAT+TGG | 0.256279 | 7_1:-65061078 | None:intergenic |
| AGAAGAGTGTTGACCTTTGA+TGG | 0.268825 | 7_1:-65058263 | None:intergenic |
| CCAATGTCATTGTATCAAAT+TGG | 0.270336 | 7_1:+65061563 | Msa1030810:CDS |
| AGTGGGCTATTTGGTGGGCT+TGG | 0.274352 | 7_1:+65061422 | Msa1030810:CDS |
| GCCAAAAGTTGCAAAGGAAT+TGG | 0.277997 | 7_1:+65060930 | Msa1030810:CDS |
| CGTTGTCGGCGATGATTACT+TGG | 0.280742 | 7_1:-65060894 | None:intergenic |
| GTGGGCTATTTGGTGGGCTT+GGG | 0.302403 | 7_1:+65061423 | Msa1030810:CDS |
| TCAAGCATAAGTGGGCTATT+TGG | 0.324040 | 7_1:+65061413 | Msa1030810:CDS |
| AGTTCACTGCTTCTTCTACT+TGG | 0.342962 | 7_1:-65060996 | None:intergenic |
| TATGCTTGATGTACATATAA+TGG | 0.345255 | 7_1:-65061399 | None:intergenic |
| CAAATTGGAAAGTTTATTCC+TGG | 0.346532 | 7_1:+65061578 | Msa1030810:CDS |
| TACAACAATGCTGGCATAAC+AGG | 0.355905 | 7_1:+65061054 | Msa1030810:CDS |
| AACTTTGCCATAACAAACTA+TGG | 0.360430 | 7_1:+65061015 | Msa1030810:CDS |
| AAATTTCGCGTTTCCTTCTC+CGG | 0.363396 | 7_1:+65061769 | Msa1030810:CDS |
| TAGTTTACCATAGTTTGTTA+TGG | 0.381695 | 7_1:-65061022 | None:intergenic |
| CCCACCAAGCATAACAGAAT+TGG | 0.384770 | 7_1:+65061086 | Msa1030810:CDS |
| GTCATGAGAATCAATGTAAC+AGG | 0.385275 | 7_1:+65061129 | Msa1030810:CDS |
| CCCCATGTTGGACAAATTCA+TGG | 0.396340 | 7_1:-65060870 | None:intergenic |
| GTTCACTGCTTCTTCTACTT+GGG | 0.400670 | 7_1:-65060995 | None:intergenic |
| GTTAGCTAGGGTTTAAATTC+CGG | 0.402050 | 7_1:+65061801 | Msa1030810:exon |
| CCAAAAGTTGCAAAGGAATT+GGG | 0.408007 | 7_1:+65060931 | Msa1030810:CDS |
| CACCAACTTCAGCAATGGTT+TGG | 0.409202 | 7_1:+65058509 | Msa1030810:CDS |
| GTGATCAAGATCTGATTGTA+AGG | 0.414105 | 7_1:-65058292 | None:intergenic |
| ACCTTTGATGGATCTAGCTC+TGG | 0.424045 | 7_1:-65058251 | None:intergenic |
| TGCTAGAGCTGCATTGTACT+TGG | 0.426496 | 7_1:+65061679 | Msa1030810:CDS |
| GCCGACAACGACACTAAACT+TGG | 0.431149 | 7_1:+65060907 | Msa1030810:CDS |
| GTAGACTTTGATATTGTGTA+TGG | 0.435479 | 7_1:-65061452 | None:intergenic |
| TCCAATTCTGTTATGCTTGG+TGG | 0.440019 | 7_1:-65061087 | None:intergenic |
| GGTCAGAATCTCATAGTTGA+TGG | 0.441728 | 7_1:+65061728 | Msa1030810:CDS |
| CCCAAGTTTAGTGTCGTTGT+CGG | 0.443828 | 7_1:-65060908 | None:intergenic |
| ACTGGATCAGCAAGTGGACT+TGG | 0.446502 | 7_1:+65060835 | Msa1030810:CDS |
| CCAATTCTGTTATGCTTGGT+GGG | 0.447299 | 7_1:-65061086 | None:intergenic |
| AACCAAACCATTGCTGAAGT+TGG | 0.452789 | 7_1:-65058511 | None:intergenic |
| CCGGATCAAATCGGTTAGCT+AGG | 0.459950 | 7_1:+65061788 | Msa1030810:exon |
| GTGATGATACCAAAGGGCTA+TGG | 0.461101 | 7_1:+65061374 | Msa1030810:CDS |
| ACACGAAATTATTCTCTTAG+TGG | 0.462248 | 7_1:-65058140 | None:intergenic |
| GCTAGTGAACTATGTGGAGC+TGG | 0.466528 | 7_1:+65061500 | Msa1030810:CDS |
| ATTTGAAAGAAAAGAAATGA+TGG | 0.466642 | 7_1:-65058225 | None:intergenic |
| TTTCCTTCTCCGGATCAAAT+CGG | 0.468245 | 7_1:+65061779 | Msa1030810:CDS |
| AATGTAACAGGAGTTATTGC+AGG | 0.478783 | 7_1:+65061141 | Msa1030810:CDS |
| GATGATGCTAAGTTTATCTC+AGG | 0.492118 | 7_1:+65061707 | Msa1030810:CDS |
| GTGTGACCCTCGAACAGATA+GGG | 0.495007 | 7_1:+65061600 | Msa1030810:CDS |
| CAATTTCCCCTATCTGTTCG+AGG | 0.495828 | 7_1:-65061607 | None:intergenic |
| CACGAAATTATTCTCTTAGT+GGG | 0.497747 | 7_1:-65058139 | None:intergenic |
| AGCATAAGTGGGCTATTTGG+TGG | 0.499085 | 7_1:+65061416 | Msa1030810:CDS |
| GCCCATGAATTTGTCCAACA+TGG | 0.508068 | 7_1:+65060868 | Msa1030810:CDS |
| GGTGTGACCCTCGAACAGAT+AGG | 0.512517 | 7_1:+65061599 | Msa1030810:CDS |
| CCAATTTGATACAATGACAT+TGG | 0.512550 | 7_1:-65061563 | None:intergenic |
| TAGGGTTTAAATTCCGGTTG+TGG | 0.513846 | 7_1:+65061807 | Msa1030810:three_prime_UTR |
| TGATTACTTGGGCCCCATGT+TGG | 0.514016 | 7_1:-65060882 | None:intergenic |
| ATGCAACAGTTGGTGGAAGA+AGG | 0.524744 | 7_1:+65058553 | Msa1030810:CDS |
| ATAATGGACCCATAGCCCTT+TGG | 0.527774 | 7_1:-65061383 | None:intergenic |
| CAGATAGGGGAAATTGTTAG+TGG | 0.528334 | 7_1:+65061614 | Msa1030810:CDS |
| CCTAGCTAACCGATTTGATC+CGG | 0.532831 | 7_1:-65061788 | None:intergenic |
| CCCATGAATTTGTCCAACAT+GGG | 0.534289 | 7_1:+65060869 | Msa1030810:CDS |
| TGATGATACCAAAGGGCTAT+GGG | 0.539265 | 7_1:+65061375 | Msa1030810:CDS |
| ATATGTACATCAAGCATAAG+TGG | 0.539440 | 7_1:+65061404 | Msa1030810:CDS |
| TGATACAATGACATTGGTGT+AGG | 0.540244 | 7_1:-65061557 | None:intergenic |
| AGATTCTATGCAACAGTTGG+TGG | 0.542590 | 7_1:+65058546 | Msa1030810:CDS |
| TCATGCTCAGAACACTAGCC+AGG | 0.543355 | 7_1:+65058323 | Msa1030810:exon |
| ATTCCACATACTGTGCTGAA+TGG | 0.544450 | 7_1:-65060954 | None:intergenic |
| AATTTCCCCTATCTGTTCGA+GGG | 0.544681 | 7_1:-65061606 | None:intergenic |
| TTTGATATTGTGTATGGATG+AGG | 0.544687 | 7_1:-65061446 | None:intergenic |
| CGGATCAAATCGGTTAGCTA+GGG | 0.545809 | 7_1:+65061789 | Msa1030810:exon |
| GCCACAGATTTCACCACCCC+TGG | 0.546305 | 7_1:-65061479 | None:intergenic |
| TTTGAAAGAAAAGAAATGAT+GGG | 0.547929 | 7_1:-65058224 | None:intergenic |
| GACATCATGTACAACAATGC+TGG | 0.549387 | 7_1:+65061045 | Msa1030810:CDS |
| ATATCAAAGTCTACAATACC+AGG | 0.550206 | 7_1:+65061461 | Msa1030810:CDS |
| AGGTCCAATTCTGTTATGCT+TGG | 0.553618 | 7_1:-65061090 | None:intergenic |
| AAGCTCACCAACTTCAGCAA+TGG | 0.557570 | 7_1:+65058504 | Msa1030810:CDS |
| GCATAAGTGGGCTATTTGGT+GGG | 0.558522 | 7_1:+65061417 | Msa1030810:CDS |
| ATCAGCAAGTGGACTTGGAA+AGG | 0.560560 | 7_1:+65060840 | Msa1030810:CDS |
| AATAAATGTTATTCATGTAG+TGG | 0.561817 | 7_1:+65061839 | Msa1030810:three_prime_UTR |
| GGGCCATTCAGCACAGTATG+TGG | 0.564489 | 7_1:+65060951 | Msa1030810:CDS |
| TTGTCTCTTACAAATATAGG+AGG | 0.567172 | 7_1:-65058165 | None:intergenic |
| GGACCTTGATGAATTTGAGA+AGG | 0.567216 | 7_1:+65061107 | Msa1030810:CDS |
| ATCTGTTCGAGGGTCACACC+AGG | 0.568597 | 7_1:-65061596 | None:intergenic |
| AGCAGATTCTATGCAACAGT+TGG | 0.569130 | 7_1:+65058543 | Msa1030810:CDS |
| CCCATGTTGGACAAATTCAT+GGG | 0.569913 | 7_1:-65060869 | None:intergenic |
| TGACCTTCTCAAATTCATCA+AGG | 0.579050 | 7_1:-65061110 | None:intergenic |
| TAACCGATTTGATCCGGAGA+AGG | 0.582964 | 7_1:-65061782 | None:intergenic |
| TATGTACATCAAGCATAAGT+GGG | 0.587715 | 7_1:+65061405 | Msa1030810:CDS |
| CTAGTGAACTATGTGGAGCT+GGG | 0.592576 | 7_1:+65061501 | Msa1030810:CDS |
| GCTCGAGTGATGATACCAAA+GGG | 0.594724 | 7_1:+65061368 | Msa1030810:CDS |
| CAGAATCTCATAGTTGATGG+AGG | 0.597836 | 7_1:+65061731 | Msa1030810:CDS |
| ACTTGGGCCAAAAGTTGCAA+AGG | 0.606003 | 7_1:+65060924 | Msa1030810:CDS |
| TGTGACCCTCGAACAGATAG+GGG | 0.612645 | 7_1:+65061601 | Msa1030810:CDS |
| TGATCAAGATCTGATTGTAA+GGG | 0.615673 | 7_1:-65058291 | None:intergenic |
| GTTGTCGGCGATGATTACTT+GGG | 0.621879 | 7_1:-65060893 | None:intergenic |
| CCATGAATTTGTCCAACATG+GGG | 0.626707 | 7_1:+65060870 | Msa1030810:CDS |
| ACCAGAGCTAGATCCATCAA+AGG | 0.636456 | 7_1:+65058250 | Msa1030810:five_prime_UTR |
| GGCTAGTGTTCTGAGCATGA+TGG | 0.637926 | 7_1:-65058320 | None:intergenic |
| ATCATAACTGGATCAGCAAG+TGG | 0.638092 | 7_1:+65060829 | Msa1030810:CDS |
| AGAATCTCATAGTTGATGGA+GGG | 0.642750 | 7_1:+65061732 | Msa1030810:CDS |
| CAATTATACAAAGATTGTTG+AGG | 0.642862 | 7_1:-65061885 | None:intergenic |
| TATCAAAGTCTACAATACCA+GGG | 0.649064 | 7_1:+65061462 | Msa1030810:CDS |
| AAAGTCTACAATACCAGGGG+TGG | 0.651264 | 7_1:+65061466 | Msa1030810:CDS |
| GGCTCGAGTGATGATACCAA+AGG | 0.651712 | 7_1:+65061367 | Msa1030810:CDS |
| CCGACAACGACACTAAACTT+GGG | 0.660224 | 7_1:+65060908 | Msa1030810:CDS |
| ATCAAAGTCTACAATACCAG+GGG | 0.674916 | 7_1:+65061463 | Msa1030810:CDS |
| GGAATGTGATGTCACTGTTG+AGG | 0.683235 | 7_1:+65060972 | Msa1030810:CDS |
| ATTGGTGTAGGAATTGCAGT+TGG | 0.686643 | 7_1:-65061545 | None:intergenic |
| AGTGGACTTAGTGCTCTGAA+AGG | 0.687194 | 7_1:+65061632 | Msa1030810:CDS |
| ACCAGGGGTGGTGAAATCTG+TGG | 0.689503 | 7_1:+65061478 | Msa1030810:CDS |
| TCTGAAAGGTGCTAAATGTG+AGG | 0.706614 | 7_1:+65061646 | Msa1030810:CDS |
| TCTGTGGCTAGTGAACTATG+TGG | 0.715679 | 7_1:+65061494 | Msa1030810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATAGAATAATTGTT+TGG | - | chr7_1:65058391-65058410 | None:intergenic | 10.0% |
| !! | CTTAAATACAATAAAAAAAT+TGG | + | chr7_1:65058943-65058962 | Msa1030810:intron | 10.0% |
| !! | AATTTATTTAACATGAATTT+GGG | - | chr7_1:65061242-65061261 | None:intergenic | 10.0% |
| !! | AAATTTATTTAACATGAATT+TGG | - | chr7_1:65061243-65061262 | None:intergenic | 10.0% |
| !! | AATTAAAAAAGAATGACTAT+TGG | - | chr7_1:65058360-65058379 | None:intergenic | 15.0% |
| !!! | TTTAAATCTTTTATATATGC+AGG | + | chr7_1:65058475-65058494 | Msa1030810:intron | 15.0% |
| !!! | TTAAATCTTTTATATATGCA+GGG | + | chr7_1:65058476-65058495 | Msa1030810:intron | 15.0% |
| !! | TCCAAAAATAAATAAACTAT+AGG | + | chr7_1:65058758-65058777 | Msa1030810:intron | 15.0% |
| !!! | TCCTATAGTTTATTTATTTT+TGG | - | chr7_1:65058762-65058781 | None:intergenic | 15.0% |
| !! | CAACTGTAAATAAATAAAAA+AGG | - | chr7_1:65059151-65059170 | None:intergenic | 15.0% |
| !!! | GTTCTTTTAAACAATTTATT+TGG | + | chr7_1:65059516-65059535 | Msa1030810:intron | 15.0% |
| !! | TACGAATGAAAATAAAAAAT+AGG | + | chr7_1:65059591-65059610 | Msa1030810:intron | 15.0% |
| !!! | TCATTAGTTTCATTATTTTA+TGG | - | chr7_1:65059631-65059650 | None:intergenic | 15.0% |
| !! | GTTCAATTAAAAAATAAAAG+TGG | - | chr7_1:65059936-65059955 | None:intergenic | 15.0% |
| !! | ATTGATTAATTTAGAAATCT+AGG | - | chr7_1:65059991-65060010 | None:intergenic | 15.0% |
| !! | AAATAAATAATGATTGATGA+TGG | - | chr7_1:65060663-65060682 | None:intergenic | 15.0% |
| !! | ACAAAAACATAAGAAAAATA+TGG | + | chr7_1:65061206-65061225 | Msa1030810:intron | 15.0% |
| !! | CAAAAACATAAGAAAAATAT+GGG | + | chr7_1:65061207-65061226 | Msa1030810:intron | 15.0% |
| !! | TTTGAAAGAAAAGAAATGAT+GGG | - | chr7_1:65058227-65058246 | None:intergenic | 20.0% |
| !! | ATTTGAAAGAAAAGAAATGA+TGG | - | chr7_1:65058228-65058247 | None:intergenic | 20.0% |
| !! | ATAAGTATTCTGTTCTATAT+AGG | + | chr7_1:65058420-65058439 | Msa1030810:intron | 20.0% |
| !! | TACTATAATTGCACATAATA+TGG | - | chr7_1:65058632-65058651 | None:intergenic | 20.0% |
| !! | CAATGAATCAAAAGTAATAT+AGG | + | chr7_1:65059295-65059314 | Msa1030810:intron | 20.0% |
| !!! | ACTTTTGATTCAAACATATT+CGG | - | chr7_1:65059331-65059350 | None:intergenic | 20.0% |
| !! | TGTTTGAATCAAAAGTAATA+TGG | + | chr7_1:65059335-65059354 | Msa1030810:intron | 20.0% |
| !! | GTTTGAATCAAAAGTAATAT+GGG | + | chr7_1:65059336-65059355 | Msa1030810:intron | 20.0% |
| !!! | CTTTTAAACAATTTATTTGG+TGG | + | chr7_1:65059519-65059538 | Msa1030810:intron | 20.0% |
| !! | AAATGAAATTGAATTCAAGT+GGG | - | chr7_1:65059554-65059573 | None:intergenic | 20.0% |
| !! | TAAATGAAATTGAATTCAAG+TGG | - | chr7_1:65059555-65059574 | None:intergenic | 20.0% |
| !! | TAAAATTGAATTAAACAGTG+TGG | - | chr7_1:65059696-65059715 | None:intergenic | 20.0% |
| !!! | ATACTTTAGTTTAGAAACAA+TGG | + | chr7_1:65059800-65059819 | Msa1030810:intron | 20.0% |
| !!! | CACTTTTTTTTTACAATGTT+TGG | - | chr7_1:65060021-65060040 | None:intergenic | 20.0% |
| !! | ATTATTATCTTGAAGAGATA+GGG | - | chr7_1:65060161-65060180 | None:intergenic | 20.0% |
| !! | AATTATTATCTTGAAGAGAT+AGG | - | chr7_1:65060162-65060181 | None:intergenic | 20.0% |
| !! | AATATGCTTACAAAAATGAA+TGG | - | chr7_1:65060224-65060243 | None:intergenic | 20.0% |
| !!! | TAAGCATTTTTATAAGCATA+TGG | + | chr7_1:65060251-65060270 | Msa1030810:intron | 20.0% |
| !! | AGACAAGTTTATATTTGAAA+GGG | + | chr7_1:65060341-65060360 | Msa1030810:intron | 20.0% |
| !!! | TTACTTTTCAAAGTCATTTA+AGG | + | chr7_1:65060498-65060517 | Msa1030810:intron | 20.0% |
| !! | ATCTTACAAAAAAATCTTGT+TGG | + | chr7_1:65060529-65060548 | Msa1030810:intron | 20.0% |
| !!! | CATTCAATTCAATTCATTTT+TGG | + | chr7_1:65060774-65060793 | Msa1030810:intron | 20.0% |
| !!! | TTTGTTTTCTAGTTTCTTTT+TGG | - | chr7_1:65061191-65061210 | None:intergenic | 20.0% |
| !! | AATAAATGTTATTCATGTAG+TGG | + | chr7_1:65061839-65061858 | Msa1030810:three_prime_UTR | 20.0% |
| !! | GTTTTGTCTCTTACAAATAT+AGG | - | chr7_1:65058171-65058190 | None:intergenic | 25.0% |
| ! | TCATTAAAGCTCTTTACTAT+GGG | + | chr7_1:65058585-65058604 | Msa1030810:intron | 25.0% |
| ! | CTAAATGTACACTAAACTAT+AGG | + | chr7_1:65058725-65058744 | Msa1030810:intron | 25.0% |
| ! | TGTCAATTTAGAAGAAAGTT+GGG | - | chr7_1:65058828-65058847 | None:intergenic | 25.0% |
| ! | ATGTCAATTTAGAAGAAAGT+TGG | - | chr7_1:65058829-65058848 | None:intergenic | 25.0% |
| !! | TATTGTATTTAAGACAAGAG+AGG | - | chr7_1:65058936-65058955 | None:intergenic | 25.0% |
| !! | TAAGTATATGTTTTCAACAC+AGG | + | chr7_1:65058997-65059016 | Msa1030810:intron | 25.0% |
| ! | CTAACAAATTATCTTCACAT+AGG | - | chr7_1:65059039-65059058 | None:intergenic | 25.0% |
| !!! | TATTTTGTTTCTCATGAGTT+CGG | - | chr7_1:65059409-65059428 | None:intergenic | 25.0% |
| ! | AAGAACTATAATTACCATGT+CGG | - | chr7_1:65059502-65059521 | None:intergenic | 25.0% |
| ! | AGAATCATTAGTTGAGTTAT+TGG | - | chr7_1:65059963-65059982 | None:intergenic | 25.0% |
| ! | AATGATTATGATCCTGAATT+TGG | - | chr7_1:65060095-65060114 | None:intergenic | 25.0% |
| ! | TCAAATATAAACTTGTCTCA+AGG | - | chr7_1:65060339-65060358 | None:intergenic | 25.0% |
| ! | GAGACAAGTTTATATTTGAA+AGG | + | chr7_1:65060340-65060359 | Msa1030810:intron | 25.0% |
| ! | GACAAGTTTATATTTGAAAG+GGG | + | chr7_1:65060342-65060361 | Msa1030810:intron | 25.0% |
| !! | TCATGGAGTATCAATAAAAA+TGG | + | chr7_1:65060392-65060411 | Msa1030810:intron | 25.0% |
| ! | TGAAAGTAACACAAATCTAA+AGG | + | chr7_1:65060458-65060477 | Msa1030810:intron | 25.0% |
| !! | AAATGACTTTGAAAAGTAAG+AGG | - | chr7_1:65060497-65060516 | None:intergenic | 25.0% |
| ! | AATCTTGTTGGATAAATCTT+CGG | + | chr7_1:65060541-65060560 | Msa1030810:intron | 25.0% |
| !!! | TCATTTCTTTTTCAACAAGT+TGG | - | chr7_1:65060583-65060602 | None:intergenic | 25.0% |
| !!! | TAGTTTACCATAGTTTGTTA+TGG | - | chr7_1:65061025-65061044 | None:intergenic | 25.0% |
| ! | AAACATAAGAAAAATATGGG+AGG | + | chr7_1:65061210-65061229 | Msa1030810:intron | 25.0% |
| !! | GCATTACAACTTTAAGTTAA+AGG | - | chr7_1:65061273-65061292 | None:intergenic | 25.0% |
| ! | CTAAAATGATGAGTTTATTG+TGG | - | chr7_1:65061334-65061353 | None:intergenic | 25.0% |
| !! | CACAATAAACTCATCATTTT+AGG | + | chr7_1:65061332-65061351 | Msa1030810:intron | 25.0% |
| !!! | CATTTTAGGTATAAAACATG+CGG | + | chr7_1:65061346-65061365 | Msa1030810:intron | 25.0% |
| ! | TATGCTTGATGTACATATAA+TGG | - | chr7_1:65061402-65061421 | None:intergenic | 25.0% |
| !! | TATTCATAATTTTCCACAAC+CGG | - | chr7_1:65061823-65061842 | None:intergenic | 25.0% |
| ! | CAATTATACAAAGATTGTTG+AGG | - | chr7_1:65061888-65061907 | None:intergenic | 25.0% |
| CACGAAATTATTCTCTTAGT+GGG | - | chr7_1:65058142-65058161 | None:intergenic | 30.0% | |
| ACACGAAATTATTCTCTTAG+TGG | - | chr7_1:65058143-65058162 | None:intergenic | 30.0% | |
| TTGTCTCTTACAAATATAGG+AGG | - | chr7_1:65058168-65058187 | None:intergenic | 30.0% | |
| TGATCAAGATCTGATTGTAA+GGG | - | chr7_1:65058294-65058313 | None:intergenic | 30.0% | |
| CTCATTAAAGCTCTTTACTA+TGG | + | chr7_1:65058584-65058603 | Msa1030810:intron | 30.0% | |
| !!! | ATTTTTTTTCCTTGATTCCC+TGG | + | chr7_1:65058686-65058705 | Msa1030810:intron | 30.0% |
| ! | ACATTTAGAGTAGCATAATC+AGG | - | chr7_1:65058713-65058732 | None:intergenic | 30.0% |
| TCTAAATTGACATGTATGAG+TGG | + | chr7_1:65058836-65058855 | Msa1030810:intron | 30.0% | |
| ! | GTGTCAAAAGTTTTACAATG+TGG | - | chr7_1:65058874-65058893 | None:intergenic | 30.0% |
| GCAAAATGTCAAATAAGTAC+AGG | - | chr7_1:65059227-65059246 | None:intergenic | 30.0% | |
| CTATTGTACTATGTATGATC+AGG | + | chr7_1:65059771-65059790 | Msa1030810:intron | 30.0% | |
| TAGTTTAGAAACAATGGCAA+CGG | + | chr7_1:65059806-65059825 | Msa1030810:intron | 30.0% | |
| ! | GTTTATGTTTGCTAAATCCA+TGG | - | chr7_1:65059893-65059912 | None:intergenic | 30.0% |
| AATTTGGCTACACAACAAAA+AGG | - | chr7_1:65060079-65060098 | None:intergenic | 30.0% | |
| ! | TGGACGTAGTATTTAAAGTA+TGG | - | chr7_1:65060200-65060219 | None:intergenic | 30.0% |
| TGCTTACAAAAATGAATGGA+TGG | - | chr7_1:65060220-65060239 | None:intergenic | 30.0% | |
| AAGGTCTCACTACTTTAATT+TGG | - | chr7_1:65060320-65060339 | None:intergenic | 30.0% | |
| !!! | TTTCTTTTTCAACAAGTTGG+AGG | - | chr7_1:65060580-65060599 | None:intergenic | 30.0% |
| GAATGAATGAGAATCATCAT+GGG | - | chr7_1:65060759-65060778 | None:intergenic | 30.0% | |
| TGAATGAATGAGAATCATCA+TGG | - | chr7_1:65060760-65060779 | None:intergenic | 30.0% | |
| GGAAAAATTGCAATCATAAC+TGG | + | chr7_1:65060817-65060836 | Msa1030810:CDS | 30.0% | |
| AACTTTGCCATAACAAACTA+TGG | + | chr7_1:65061015-65061034 | Msa1030810:CDS | 30.0% | |
| ATATGTACATCAAGCATAAG+TGG | + | chr7_1:65061404-65061423 | Msa1030810:CDS | 30.0% | |
| TATGTACATCAAGCATAAGT+GGG | + | chr7_1:65061405-65061424 | Msa1030810:CDS | 30.0% | |
| TTTGATATTGTGTATGGATG+AGG | - | chr7_1:65061449-65061468 | None:intergenic | 30.0% | |
| GTAGACTTTGATATTGTGTA+TGG | - | chr7_1:65061455-65061474 | None:intergenic | 30.0% | |
| ATATCAAAGTCTACAATACC+AGG | + | chr7_1:65061461-65061480 | Msa1030810:CDS | 30.0% | |
| TATCAAAGTCTACAATACCA+GGG | + | chr7_1:65061462-65061481 | Msa1030810:CDS | 30.0% | |
| CCAATTTGATACAATGACAT+TGG | - | chr7_1:65061566-65061585 | None:intergenic | 30.0% | |
| CCAATGTCATTGTATCAAAT+TGG | + | chr7_1:65061563-65061582 | Msa1030810:CDS | 30.0% | |
| CAAATTGGAAAGTTTATTCC+TGG | + | chr7_1:65061578-65061597 | Msa1030810:CDS | 30.0% | |
| ! | AGGAAACGCGAAATTTTTAA+TGG | - | chr7_1:65061765-65061784 | None:intergenic | 30.0% |
| !! | GATGGGTTGATGAGTATTTA+AGG | - | chr7_1:65058210-65058229 | None:intergenic | 35.0% |
| GTGATCAAGATCTGATTGTA+AGG | - | chr7_1:65058295-65058314 | None:intergenic | 35.0% | |
| CTATTGGAGTATATTGAACC+TGG | - | chr7_1:65058344-65058363 | None:intergenic | 35.0% | |
| AGAGACACGTACACTTAAAA+AGG | - | chr7_1:65059184-65059203 | None:intergenic | 35.0% | |
| GTCAAATAAGTACAGGAGTT+AGG | - | chr7_1:65059220-65059239 | None:intergenic | 35.0% | |
| TCGGTTCATTTCGGATAATT+TGG | - | chr7_1:65059390-65059409 | None:intergenic | 35.0% | |
| CATATGAACATGCATATTGG+AGG | - | chr7_1:65059870-65059889 | None:intergenic | 35.0% | |
| TGGCATATGAACATGCATAT+TGG | - | chr7_1:65059873-65059892 | None:intergenic | 35.0% | |
| ATATGCATGTTCATATGCCA+TGG | + | chr7_1:65059873-65059892 | Msa1030810:intron | 35.0% | |
| ! | TTTGTTGTGTAGCCAAATTC+AGG | + | chr7_1:65060080-65060099 | Msa1030810:intron | 35.0% |
| !!! | CATTTTTGGTTCCAAAAAGC+AGG | + | chr7_1:65060788-65060807 | Msa1030810:intron | 35.0% |
| !! | TTTCCTTCTAACCTGCTTTT+TGG | - | chr7_1:65060802-65060821 | None:intergenic | 35.0% |
| CCAAAAGTTGCAAAGGAATT+GGG | + | chr7_1:65060931-65060950 | Msa1030810:CDS | 35.0% | |
| TGACCTTCTCAAATTCATCA+AGG | - | chr7_1:65061113-65061132 | None:intergenic | 35.0% | |
| GTCATGAGAATCAATGTAAC+AGG | + | chr7_1:65061129-65061148 | Msa1030810:CDS | 35.0% | |
| AATGTAACAGGAGTTATTGC+AGG | + | chr7_1:65061141-65061160 | Msa1030810:CDS | 35.0% | |
| ATCAAAGTCTACAATACCAG+GGG | + | chr7_1:65061463-65061482 | Msa1030810:CDS | 35.0% | |
| TGATACAATGACATTGGTGT+AGG | - | chr7_1:65061560-65061579 | None:intergenic | 35.0% | |
| GATGATGCTAAGTTTATCTC+AGG | + | chr7_1:65061707-65061726 | Msa1030810:CDS | 35.0% | |
| !! | AGAATCTCATAGTTGATGGA+GGG | + | chr7_1:65061732-65061751 | Msa1030810:CDS | 35.0% |
| GTTAGCTAGGGTTTAAATTC+CGG | + | chr7_1:65061801-65061820 | Msa1030810:exon | 35.0% | |
| !! | AGAAGAGTGTTGACCTTTGA+TGG | - | chr7_1:65058266-65058285 | None:intergenic | 40.0% |
| AACCAAACCATTGCTGAAGT+TGG | - | chr7_1:65058514-65058533 | None:intergenic | 40.0% | |
| AGCAGATTCTATGCAACAGT+TGG | + | chr7_1:65058543-65058562 | Msa1030810:CDS | 40.0% | |
| AGATTCTATGCAACAGTTGG+TGG | + | chr7_1:65058546-65058565 | Msa1030810:CDS | 40.0% | |
| CTCATGAGTTCGGTTCATTT+CGG | - | chr7_1:65059399-65059418 | None:intergenic | 40.0% | |
| !!! | GCGCTTTTTTGTGTTAACTC+CGG | + | chr7_1:65059457-65059476 | Msa1030810:intron | 40.0% |
| ACGGATTTCTGTGAAACACA+TGG | + | chr7_1:65059825-65059844 | Msa1030810:intron | 40.0% | |
| CATCCTTCATCGCTAATTGA+AGG | - | chr7_1:65060369-65060388 | None:intergenic | 40.0% | |
| CTTCAATTAGCGATGAAGGA+TGG | + | chr7_1:65060367-65060386 | Msa1030810:intron | 40.0% | |
| GAAAGACAAAAGGAGTTGCT+TGG | - | chr7_1:65060714-65060733 | None:intergenic | 40.0% | |
| TGTGAGAAAAGAAAGATGGG+GGG | - | chr7_1:65060736-65060755 | None:intergenic | 40.0% | |
| GTGTGAGAAAAGAAAGATGG+GGG | - | chr7_1:65060737-65060756 | None:intergenic | 40.0% | |
| GGTGTGAGAAAAGAAAGATG+GGG | - | chr7_1:65060738-65060757 | None:intergenic | 40.0% | |
| GGGTGTGAGAAAAGAAAGAT+GGG | - | chr7_1:65060739-65060758 | None:intergenic | 40.0% | |
| TGGGTGTGAGAAAAGAAAGA+TGG | - | chr7_1:65060740-65060759 | None:intergenic | 40.0% | |
| GTTCCAAAAAGCAGGTTAGA+AGG | + | chr7_1:65060796-65060815 | Msa1030810:intron | 40.0% | |
| ATCATAACTGGATCAGCAAG+TGG | + | chr7_1:65060829-65060848 | Msa1030810:CDS | 40.0% | |
| CCCATGTTGGACAAATTCAT+GGG | - | chr7_1:65060872-65060891 | None:intergenic | 40.0% | |
| CCCATGAATTTGTCCAACAT+GGG | + | chr7_1:65060869-65060888 | Msa1030810:CDS | 40.0% | |
| CCATGAATTTGTCCAACATG+GGG | + | chr7_1:65060870-65060889 | Msa1030810:CDS | 40.0% | |
| GCCAAAAGTTGCAAAGGAAT+TGG | + | chr7_1:65060930-65060949 | Msa1030810:CDS | 40.0% | |
| ! | CCCAATTCCTTTGCAACTTT+TGG | - | chr7_1:65060934-65060953 | None:intergenic | 40.0% |
| ATTCCACATACTGTGCTGAA+TGG | - | chr7_1:65060957-65060976 | None:intergenic | 40.0% | |
| GTTCACTGCTTCTTCTACTT+GGG | - | chr7_1:65060998-65061017 | None:intergenic | 40.0% | |
| AGTTCACTGCTTCTTCTACT+TGG | - | chr7_1:65060999-65061018 | None:intergenic | 40.0% | |
| GACATCATGTACAACAATGC+TGG | + | chr7_1:65061045-65061064 | Msa1030810:CDS | 40.0% | |
| TACAACAATGCTGGCATAAC+AGG | + | chr7_1:65061054-65061073 | Msa1030810:CDS | 40.0% | |
| ! | GTTATGCTTGGTGGGATTAT+TGG | - | chr7_1:65061081-65061100 | None:intergenic | 40.0% |
| CCAATTCTGTTATGCTTGGT+GGG | - | chr7_1:65061089-65061108 | None:intergenic | 40.0% | |
| TCCAATTCTGTTATGCTTGG+TGG | - | chr7_1:65061090-65061109 | None:intergenic | 40.0% | |
| AGGTCCAATTCTGTTATGCT+TGG | - | chr7_1:65061093-65061112 | None:intergenic | 40.0% | |
| GGACCTTGATGAATTTGAGA+AGG | + | chr7_1:65061107-65061126 | Msa1030810:CDS | 40.0% | |
| TGATGATACCAAAGGGCTAT+GGG | + | chr7_1:65061375-65061394 | Msa1030810:CDS | 40.0% | |
| !! | TCAAGCATAAGTGGGCTATT+TGG | + | chr7_1:65061413-65061432 | Msa1030810:CDS | 40.0% |
| ATTGGTGTAGGAATTGCAGT+TGG | - | chr7_1:65061548-65061567 | None:intergenic | 40.0% | |
| AATTTCCCCTATCTGTTCGA+GGG | - | chr7_1:65061609-65061628 | None:intergenic | 40.0% | |
| CAGATAGGGGAAATTGTTAG+TGG | + | chr7_1:65061614-65061633 | Msa1030810:CDS | 40.0% | |
| !! | TCTGAAAGGTGCTAAATGTG+AGG | + | chr7_1:65061646-65061665 | Msa1030810:CDS | 40.0% |
| GGTCAGAATCTCATAGTTGA+TGG | + | chr7_1:65061728-65061747 | Msa1030810:CDS | 40.0% | |
| !! | CAGAATCTCATAGTTGATGG+AGG | + | chr7_1:65061731-65061750 | Msa1030810:CDS | 40.0% |
| AAATTTCGCGTTTCCTTCTC+CGG | + | chr7_1:65061769-65061788 | Msa1030810:CDS | 40.0% | |
| TTTCCTTCTCCGGATCAAAT+CGG | + | chr7_1:65061779-65061798 | Msa1030810:CDS | 40.0% | |
| TAGGGTTTAAATTCCGGTTG+TGG | + | chr7_1:65061807-65061826 | Msa1030810:three_prime_UTR | 40.0% | |
| ACCAGAGCTAGATCCATCAA+AGG | + | chr7_1:65058250-65058269 | Msa1030810:five_prime_UTR | 45.0% | |
| ! | ACCTTTGATGGATCTAGCTC+TGG | - | chr7_1:65058254-65058273 | None:intergenic | 45.0% |
| AAGCTCACCAACTTCAGCAA+TGG | + | chr7_1:65058504-65058523 | Msa1030810:CDS | 45.0% | |
| CACCAACTTCAGCAATGGTT+TGG | + | chr7_1:65058509-65058528 | Msa1030810:CDS | 45.0% | |
| !! | ATGCAACAGTTGGTGGAAGA+AGG | + | chr7_1:65058553-65058572 | Msa1030810:CDS | 45.0% |
| TAATCAGGACCAGGGAATCA+AGG | - | chr7_1:65058698-65058717 | None:intergenic | 45.0% | |
| GAGTAGCATAATCAGGACCA+GGG | - | chr7_1:65058706-65058725 | None:intergenic | 45.0% | |
| AGAGTAGCATAATCAGGACC+AGG | - | chr7_1:65058707-65058726 | None:intergenic | 45.0% | |
| GTACGTGTCTCTCACTTTAG+AGG | + | chr7_1:65059192-65059211 | Msa1030810:intron | 45.0% | |
| TGACAGACTCTCACAACGTA+AGG | + | chr7_1:65059362-65059381 | Msa1030810:intron | 45.0% | |
| TGTGTTAACTCCGGATCCTA+TGG | + | chr7_1:65059466-65059485 | Msa1030810:intron | 45.0% | |
| GTGTTAACTCCGGATCCTAT+GGG | + | chr7_1:65059467-65059486 | Msa1030810:intron | 45.0% | |
| GGACCTTCAATTAGCGATGA+AGG | + | chr7_1:65060363-65060382 | Msa1030810:intron | 45.0% | |
| ! | CAAGTTGGAGGATGATGTTG+TGG | - | chr7_1:65060568-65060587 | None:intergenic | 45.0% |
| AAGATGGGGGGAAAGACAAA+AGG | - | chr7_1:65060724-65060743 | None:intergenic | 45.0% | |
| ! | ATCAGCAAGTGGACTTGGAA+AGG | + | chr7_1:65060840-65060859 | Msa1030810:CDS | 45.0% |
| GCCCATGAATTTGTCCAACA+TGG | + | chr7_1:65060868-65060887 | Msa1030810:CDS | 45.0% | |
| CCCCATGTTGGACAAATTCA+TGG | - | chr7_1:65060873-65060892 | None:intergenic | 45.0% | |
| GTTGTCGGCGATGATTACTT+GGG | - | chr7_1:65060896-65060915 | None:intergenic | 45.0% | |
| ! | CCCAAGTTTAGTGTCGTTGT+CGG | - | chr7_1:65060911-65060930 | None:intergenic | 45.0% |
| CCGACAACGACACTAAACTT+GGG | + | chr7_1:65060908-65060927 | Msa1030810:CDS | 45.0% | |
| ACTTGGGCCAAAAGTTGCAA+AGG | + | chr7_1:65060924-65060943 | Msa1030810:CDS | 45.0% | |
| GGAATGTGATGTCACTGTTG+AGG | + | chr7_1:65060972-65060991 | Msa1030810:CDS | 45.0% | |
| CCCACCAAGCATAACAGAAT+TGG | + | chr7_1:65061086-65061105 | Msa1030810:CDS | 45.0% | |
| GCTCGAGTGATGATACCAAA+GGG | + | chr7_1:65061368-65061387 | Msa1030810:CDS | 45.0% | |
| GTGATGATACCAAAGGGCTA+TGG | + | chr7_1:65061374-65061393 | Msa1030810:CDS | 45.0% | |
| !! | ATAATGGACCCATAGCCCTT+TGG | - | chr7_1:65061386-65061405 | None:intergenic | 45.0% |
| !! | AGCATAAGTGGGCTATTTGG+TGG | + | chr7_1:65061416-65061435 | Msa1030810:CDS | 45.0% |
| !! | GCATAAGTGGGCTATTTGGT+GGG | + | chr7_1:65061417-65061436 | Msa1030810:CDS | 45.0% |
| AAAGTCTACAATACCAGGGG+TGG | + | chr7_1:65061466-65061485 | Msa1030810:CDS | 45.0% | |
| TCTGTGGCTAGTGAACTATG+TGG | + | chr7_1:65061494-65061513 | Msa1030810:CDS | 45.0% | |
| CTAGTGAACTATGTGGAGCT+GGG | + | chr7_1:65061501-65061520 | Msa1030810:CDS | 45.0% | |
| CAATTTCCCCTATCTGTTCG+AGG | - | chr7_1:65061610-65061629 | None:intergenic | 45.0% | |
| ! | AGTGGACTTAGTGCTCTGAA+AGG | + | chr7_1:65061632-65061651 | Msa1030810:CDS | 45.0% |
| TGCTAGAGCTGCATTGTACT+TGG | + | chr7_1:65061679-65061698 | Msa1030810:CDS | 45.0% | |
| !! | TAACCGATTTGATCCGGAGA+AGG | - | chr7_1:65061785-65061804 | None:intergenic | 45.0% |
| !! | CCTAGCTAACCGATTTGATC+CGG | - | chr7_1:65061791-65061810 | None:intergenic | 45.0% |
| ! | CGGATCAAATCGGTTAGCTA+GGG | + | chr7_1:65061789-65061808 | Msa1030810:exon | 45.0% |
| !! | ATTAAAAATTAAAGAAAAAA+AGG | - | chr7_1:65059251-65059270 | None:intergenic | 5.0% |
| ! | GGCTAGTGTTCTGAGCATGA+TGG | - | chr7_1:65058323-65058342 | None:intergenic | 50.0% |
| TCATGCTCAGAACACTAGCC+AGG | + | chr7_1:65058323-65058342 | Msa1030810:exon | 50.0% | |
| AACTCCGGATCCTATGGGAA+AGG | + | chr7_1:65059472-65059491 | Msa1030810:intron | 50.0% | |
| ACTCCGGATCCTATGGGAAA+GGG | + | chr7_1:65059473-65059492 | Msa1030810:intron | 50.0% | |
| TGTCCCTTTCCCATAGGATC+CGG | - | chr7_1:65059479-65059498 | None:intergenic | 50.0% | |
| CATATTGGAGGCAAGCTTGC+GGG | - | chr7_1:65059858-65059877 | None:intergenic | 50.0% | |
| GCATATTGGAGGCAAGCTTG+CGG | - | chr7_1:65059859-65059878 | None:intergenic | 50.0% | |
| AGCGATGAAGGATGGAGTCA+TGG | + | chr7_1:65060375-65060394 | Msa1030810:intron | 50.0% | |
| ! | ACTGGATCAGCAAGTGGACT+TGG | + | chr7_1:65060835-65060854 | Msa1030810:CDS | 50.0% |
| TGATTACTTGGGCCCCATGT+TGG | - | chr7_1:65060885-65060904 | None:intergenic | 50.0% | |
| CGTTGTCGGCGATGATTACT+TGG | - | chr7_1:65060897-65060916 | None:intergenic | 50.0% | |
| GCCGACAACGACACTAAACT+TGG | + | chr7_1:65060907-65060926 | Msa1030810:CDS | 50.0% | |
| GGCTCGAGTGATGATACCAA+AGG | + | chr7_1:65061367-65061386 | Msa1030810:CDS | 50.0% | |
| GCTAGTGAACTATGTGGAGC+TGG | + | chr7_1:65061500-65061519 | Msa1030810:CDS | 50.0% | |
| GTGTGACCCTCGAACAGATA+GGG | + | chr7_1:65061600-65061619 | Msa1030810:CDS | 50.0% | |
| TGTGACCCTCGAACAGATAG+GGG | + | chr7_1:65061601-65061620 | Msa1030810:CDS | 50.0% | |
| ! | CCGGATCAAATCGGTTAGCT+AGG | + | chr7_1:65061788-65061807 | Msa1030810:exon | 50.0% |
| ! | TGTCGGTGTCCCTTTCCCAT+AGG | - | chr7_1:65059485-65059504 | None:intergenic | 55.0% |
| ATGGGAAAGGGACACCGACA+TGG | + | chr7_1:65059485-65059504 | Msa1030810:intron | 55.0% | |
| GGGCCATTCAGCACAGTATG+TGG | + | chr7_1:65060951-65060970 | Msa1030810:CDS | 55.0% | |
| !! | AGTGGGCTATTTGGTGGGCT+TGG | + | chr7_1:65061422-65061441 | Msa1030810:CDS | 55.0% |
| !! | GTGGGCTATTTGGTGGGCTT+GGG | + | chr7_1:65061423-65061442 | Msa1030810:CDS | 55.0% |
| ACCAGGGGTGGTGAAATCTG+TGG | + | chr7_1:65061478-65061497 | Msa1030810:CDS | 55.0% | |
| ATCTGTTCGAGGGTCACACC+AGG | - | chr7_1:65061599-65061618 | None:intergenic | 55.0% | |
| GGTGTGACCCTCGAACAGAT+AGG | + | chr7_1:65061599-65061618 | Msa1030810:CDS | 55.0% | |
| GCCACAGATTTCACCACCCC+TGG | - | chr7_1:65061482-65061501 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 65058132 | 65061933 | 65058132 | ID=Msa1030810;Name=Msa1030810 |
| chr7_1 | mRNA | 65058132 | 65061933 | 65058132 | ID=Msa1030810-mRNA-1;Parent=Msa1030810;Name=Msa1030810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=193|1|1|1|1|1|4|128|300 |
| chr7_1 | exon | 65058132 | 65058344 | 65058132 | ID=Msa1030810-mRNA-1:exon:14344;Parent=Msa1030810-mRNA-1 |
| chr7_1 | exon | 65058497 | 65058574 | 65058497 | ID=Msa1030810-mRNA-1:exon:14345;Parent=Msa1030810-mRNA-1 |
| chr7_1 | exon | 65060810 | 65061162 | 65060810 | ID=Msa1030810-mRNA-1:exon:14346;Parent=Msa1030810-mRNA-1 |
| chr7_1 | exon | 65061354 | 65061933 | 65061354 | ID=Msa1030810-mRNA-1:exon:14347;Parent=Msa1030810-mRNA-1 |
| chr7_1 | five_prime_UTR | 65058132 | 65058324 | 65058132 | ID=Msa1030810-mRNA-1:five_prime_utr;Parent=Msa1030810-mRNA-1 |
| chr7_1 | CDS | 65058325 | 65058344 | 65058325 | ID=Msa1030810-mRNA-1:cds;Parent=Msa1030810-mRNA-1 |
| chr7_1 | CDS | 65058497 | 65058574 | 65058497 | ID=Msa1030810-mRNA-1:cds;Parent=Msa1030810-mRNA-1 |
| chr7_1 | CDS | 65060810 | 65061162 | 65060810 | ID=Msa1030810-mRNA-1:cds;Parent=Msa1030810-mRNA-1 |
| chr7_1 | CDS | 65061354 | 65061805 | 65061354 | ID=Msa1030810-mRNA-1:cds;Parent=Msa1030810-mRNA-1 |
| chr7_1 | three_prime_UTR | 65061806 | 65061933 | 65061806 | ID=Msa1030810-mRNA-1:three_prime_utr;Parent=Msa1030810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
