Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101960 | XP_039688711.1 | 95.356 | 926 | 37 | 2 | 1 | 924 | 1 | 922 | 0.0 | 1712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101960 | sp|O48724|WEB1_ARATH | 61.087 | 699 | 235 | 11 | 250 | 919 | 115 | 805 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101960 | G7I3K8 | 95.032 | 926 | 37 | 2 | 1 | 924 | 1 | 919 | 0.0 | 1705 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0101960 | -0.810475 | 1.131570e-50 | -8.615850e-47 |
| Msa0009640 | Msa0101960 | 0.805426 | 1.342646e-49 | -8.615850e-47 |
| Msa0012200 | Msa0101960 | 0.817526 | 3.150352e-52 | -8.615850e-47 |
| Msa0022470 | Msa0101960 | 0.803056 | 4.182040e-49 | -8.615850e-47 |
| Msa0025070 | Msa0101960 | -0.800895 | 1.162998e-48 | -8.615850e-47 |
| Msa0025290 | Msa0101960 | -0.830318 | 3.141943e-55 | -8.615850e-47 |
| Msa0026630 | Msa0101960 | 0.876610 | 1.217411e-68 | -8.615850e-47 |
| Msa0029360 | Msa0101960 | 0.809941 | 1.474926e-50 | -8.615850e-47 |
| Msa0035050 | Msa0101960 | -0.801797 | 7.600360e-49 | -8.615850e-47 |
| Msa0041840 | Msa0101960 | 0.831575 | 1.544481e-55 | -8.615850e-47 |
| Msa0043740 | Msa0101960 | 0.826767 | 2.263818e-54 | -8.615850e-47 |
| Msa0043850 | Msa0101960 | 0.810513 | 1.110506e-50 | -8.615850e-47 |
| Msa0051960 | Msa0101960 | 0.992219 | 5.386268e-192 | -8.615850e-47 |
| Msa0060710 | Msa0101960 | -0.814067 | 1.860240e-51 | -8.615850e-47 |
| Msa0061220 | Msa0101960 | 0.846194 | 2.532050e-59 | -8.615850e-47 |
| Msa0072600 | Msa0101960 | -0.817432 | 3.307044e-52 | -8.615850e-47 |
| Msa0077370 | Msa0101960 | 0.825055 | 5.774978e-54 | -8.615850e-47 |
| Msa0077380 | Msa0101960 | 0.808295 | 3.321800e-50 | -8.615850e-47 |
| Msa0082230 | Msa0101960 | 0.808373 | 3.197629e-50 | -8.615850e-47 |
| Msa0082420 | Msa0101960 | 0.804230 | 2.386447e-49 | -8.615850e-47 |
| Msa0090090 | Msa0101960 | 0.836155 | 1.104505e-56 | -8.615850e-47 |
| Msa0090510 | Msa0101960 | 0.802520 | 5.396366e-49 | -8.615850e-47 |
| Msa0093950 | Msa0101960 | -0.808270 | 3.363950e-50 | -8.615850e-47 |
| Msa0094710 | Msa0101960 | 0.872351 | 3.398660e-67 | -8.615850e-47 |
| Msa0095940 | Msa0101960 | 0.859480 | 4.018670e-63 | -8.615850e-47 |
| Msa0101960 | Msa0108760 | 0.821666 | 3.576034e-53 | -8.615850e-47 |
| Msa0101960 | Msa0112550 | -0.810003 | 1.430662e-50 | -8.615850e-47 |
| Msa0101960 | Msa0113370 | -0.807172 | 5.755116e-50 | -8.615850e-47 |
| Msa0101960 | Msa0114790 | 0.835621 | 1.508456e-56 | -8.615850e-47 |
| Msa0101960 | Msa0117520 | 0.827256 | 1.729347e-54 | -8.615850e-47 |
| Msa0101960 | Msa0129770 | 0.817611 | 3.015266e-52 | -8.615850e-47 |
| Msa0101960 | Msa0137560 | 0.833208 | 6.084753e-56 | -8.615850e-47 |
| Msa0101960 | Msa0137980 | 0.802529 | 5.373828e-49 | -8.615850e-47 |
| Msa0101960 | Msa0138680 | -0.822157 | 2.752067e-53 | -8.615850e-47 |
| Msa0101960 | Msa0162140 | 0.806948 | 6.418210e-50 | -8.615850e-47 |
| Msa0101960 | Msa0171330 | 0.817446 | 3.283638e-52 | -8.615850e-47 |
| Msa0101960 | Msa0174100 | 0.825823 | 3.799159e-54 | -8.615850e-47 |
| Msa0101960 | Msa0179140 | 0.818376 | 2.024311e-52 | -8.615850e-47 |
| Msa0101960 | Msa0182560 | 0.806729 | 7.140464e-50 | -8.615850e-47 |
| Msa0101960 | Msa0183390 | 0.808694 | 2.730647e-50 | -8.615850e-47 |
| Msa0101960 | Msa0198730 | 0.819984 | 8.712982e-53 | -8.615850e-47 |
| Msa0101960 | Msa0199350 | 0.801250 | 9.837248e-49 | -8.615850e-47 |
| Msa0101960 | Msa0203090 | 0.814501 | 1.492092e-51 | -8.615850e-47 |
| Msa0101960 | Msa0213620 | -0.837656 | 4.569179e-57 | -8.615850e-47 |
| Msa0101960 | Msa0220400 | -0.821108 | 4.810366e-53 | -8.615850e-47 |
| Msa0101960 | Msa0224130 | 0.804116 | 2.521194e-49 | -8.615850e-47 |
| Msa0101960 | Msa0227360 | 0.813730 | 2.207869e-51 | -8.615850e-47 |
| Msa0101960 | Msa0241480 | 0.832710 | 8.091886e-56 | -8.615850e-47 |
| Msa0101960 | Msa0257900 | 0.812589 | 3.928409e-51 | -8.615850e-47 |
| Msa0101960 | Msa0264680 | 0.834554 | 2.801986e-56 | -8.615850e-47 |
| Msa0101960 | Msa0265270 | 0.805345 | 1.396155e-49 | -8.615850e-47 |
| Msa0101960 | Msa0276430 | 0.837565 | 4.821341e-57 | -8.615850e-47 |
| Msa0101960 | Msa0295420 | 0.802216 | 6.232676e-49 | -8.615850e-47 |
| Msa0101960 | Msa0296900 | 0.834156 | 3.527863e-56 | -8.615850e-47 |
| Msa0101960 | Msa0299530 | -0.831358 | 1.746296e-55 | -8.615850e-47 |
| Msa0101960 | Msa0302510 | 0.804724 | 1.882839e-49 | -8.615850e-47 |
| Msa0101960 | Msa0302730 | 0.831213 | 1.895928e-55 | -8.615850e-47 |
| Msa0101960 | Msa0302840 | 0.832921 | 7.171070e-56 | -8.615850e-47 |
| Msa0101960 | Msa0306000 | 0.829742 | 4.341448e-55 | -8.615850e-47 |
| Msa0101960 | Msa0306310 | 0.823296 | 1.495316e-53 | -8.615850e-47 |
| Msa0101960 | Msa0307420 | 0.817183 | 3.762513e-52 | -8.615850e-47 |
| Msa0101960 | Msa0310720 | -0.810978 | 8.810349e-51 | -8.615850e-47 |
| Msa0101960 | Msa0310730 | -0.824732 | 6.882477e-54 | -8.615850e-47 |
| Msa0101960 | Msa0316470 | 0.845865 | 3.111376e-59 | -8.615850e-47 |
| Msa0101960 | Msa0319020 | 0.821165 | 4.666728e-53 | -8.615850e-47 |
| Msa0101960 | Msa0319680 | 0.802775 | 4.780149e-49 | -8.615850e-47 |
| Msa0101960 | Msa0331380 | 0.808880 | 2.491766e-50 | -8.615850e-47 |
| Msa0101960 | Msa0335080 | 0.841195 | 5.504571e-58 | -8.615850e-47 |
| Msa0101960 | Msa0349950 | 0.826762 | 2.269936e-54 | -8.615850e-47 |
| Msa0101960 | Msa0355550 | 0.842998 | 1.835919e-58 | -8.615850e-47 |
| Msa0101960 | Msa0365950 | 0.814428 | 1.548746e-51 | -8.615850e-47 |
| Msa0101960 | Msa0370580 | -0.808966 | 2.388247e-50 | -8.615850e-47 |
| Msa0101960 | Msa0374340 | -0.807845 | 4.142017e-50 | -8.615850e-47 |
| Msa0101960 | Msa0374420 | -0.812125 | 4.961480e-51 | -8.615850e-47 |
| Msa0101960 | Msa0383870 | -0.802167 | 6.378681e-49 | -8.615850e-47 |
| Msa0101960 | Msa0383900 | 0.828666 | 7.917154e-55 | -8.615850e-47 |
| Msa0101960 | Msa0387040 | 0.819866 | 9.272503e-53 | -8.615850e-47 |
| Msa0101960 | Msa0388080 | -0.801715 | 7.900198e-49 | -8.615850e-47 |
| Msa0101960 | Msa0389900 | 0.804250 | 2.363529e-49 | -8.615850e-47 |
| Msa0101960 | Msa0403470 | -0.848754 | 5.010437e-60 | -8.615850e-47 |
| Msa0101960 | Msa0412260 | 0.802017 | 6.847605e-49 | -8.615850e-47 |
| Msa0101960 | Msa0419060 | 0.807519 | 4.857864e-50 | -8.615850e-47 |
| Msa0101960 | Msa0425590 | 0.803524 | 3.345759e-49 | -8.615850e-47 |
| Msa0101960 | Msa0427310 | 0.815328 | 9.782477e-52 | -8.615850e-47 |
| Msa0101960 | Msa0428200 | 0.832728 | 8.011288e-56 | -8.615850e-47 |
| Msa0101960 | Msa0431900 | 0.840503 | 8.360041e-58 | -8.615850e-47 |
| Msa0101960 | Msa0434300 | 0.814683 | 1.359983e-51 | -8.615850e-47 |
| Msa0101960 | Msa0434400 | 0.820443 | 6.841020e-53 | -8.615850e-47 |
| Msa0101960 | Msa0442860 | 0.815512 | 8.899956e-52 | -8.615850e-47 |
| Msa0101960 | Msa0459860 | 0.816908 | 4.339628e-52 | -8.615850e-47 |
| Msa0101960 | Msa0469870 | -0.816466 | 5.452098e-52 | -8.615850e-47 |
| Msa0101960 | Msa0470880 | 0.807452 | 5.019154e-50 | -8.615850e-47 |
| Msa0101960 | Msa0476170 | -0.808485 | 3.026297e-50 | -8.615850e-47 |
| Msa0101960 | Msa0476890 | -0.804630 | 1.969649e-49 | -8.615850e-47 |
| Msa0101960 | Msa0480090 | -0.816246 | 6.103747e-52 | -8.615850e-47 |
| Msa0101960 | Msa0490320 | 0.843676 | 1.210226e-58 | -8.615850e-47 |
| Msa0101960 | Msa0497120 | 0.823578 | 1.284599e-53 | -8.615850e-47 |
| Msa0101960 | Msa0500610 | -0.802333 | 5.895349e-49 | -8.615850e-47 |
| Msa0101960 | Msa0500700 | -0.812432 | 4.251347e-51 | -8.615850e-47 |
| Msa0101960 | Msa0512950 | -0.809350 | 1.975901e-50 | -8.615850e-47 |
| Msa0101960 | Msa0517270 | 0.837774 | 4.261567e-57 | -8.615850e-47 |
| Msa0101960 | Msa0517990 | 0.808583 | 2.884565e-50 | -8.615850e-47 |
| Msa0101960 | Msa0520770 | 0.835020 | 2.139724e-56 | -8.615850e-47 |
| Msa0101960 | Msa0528990 | 0.821338 | 4.258346e-53 | -8.615850e-47 |
| Msa0101960 | Msa0529000 | 0.813799 | 2.131299e-51 | -8.615850e-47 |
| Msa0101960 | Msa0530730 | 0.833482 | 5.201256e-56 | -8.615850e-47 |
| Msa0101960 | Msa0534610 | 0.825939 | 3.565068e-54 | -8.615850e-47 |
| Msa0101960 | Msa0545050 | 0.882164 | 1.310286e-70 | -8.615850e-47 |
| Msa0101960 | Msa0548650 | -0.849353 | 3.413786e-60 | -8.615850e-47 |
| Msa0101960 | Msa0549140 | 0.800804 | 1.213564e-48 | -8.615850e-47 |
| Msa0101960 | Msa0556660 | 0.811740 | 6.019604e-51 | -8.615850e-47 |
| Msa0101960 | Msa0558650 | 0.849966 | 2.302996e-60 | -8.615850e-47 |
| Msa0101960 | Msa0561300 | 0.802249 | 6.136901e-49 | -8.615850e-47 |
| Msa0101960 | Msa0563860 | 0.809089 | 2.247516e-50 | -8.615850e-47 |
| Msa0101960 | Msa0567370 | 0.851017 | 1.166867e-60 | -8.615850e-47 |
| Msa0101960 | Msa0567430 | 0.848912 | 4.529997e-60 | -8.615850e-47 |
| Msa0101960 | Msa0567480 | 0.872654 | 2.693950e-67 | -8.615850e-47 |
| Msa0101960 | Msa0567520 | 0.862906 | 3.634847e-64 | -8.615850e-47 |
| Msa0101960 | Msa0570700 | 0.813496 | 2.486125e-51 | -8.615850e-47 |
| Msa0101960 | Msa0574930 | 0.854403 | 1.259901e-61 | -8.615850e-47 |
| Msa0101960 | Msa0576900 | 0.807959 | 3.918302e-50 | -8.615850e-47 |
| Msa0101960 | Msa0577490 | 0.803254 | 3.805429e-49 | -8.615850e-47 |
| Msa0101960 | Msa0588590 | 0.802014 | 6.860105e-49 | -8.615850e-47 |
| Msa0101960 | Msa0588620 | 0.805026 | 1.627962e-49 | -8.615850e-47 |
| Msa0101960 | Msa0588710 | 0.816390 | 5.668863e-52 | -8.615850e-47 |
| Msa0101960 | Msa0590810 | 0.830481 | 2.866413e-55 | -8.615850e-47 |
| Msa0101960 | Msa0599220 | 0.824337 | 8.524900e-54 | -8.615850e-47 |
| Msa0101960 | Msa0600590 | 0.878835 | 2.035833e-69 | -8.615850e-47 |
| Msa0101960 | Msa0603690 | -0.809677 | 1.681585e-50 | -8.615850e-47 |
| Msa0101960 | Msa0610830 | 0.832031 | 1.192014e-55 | -8.615850e-47 |
| Msa0101960 | Msa0611060 | 0.800974 | 1.120317e-48 | -8.615850e-47 |
| Msa0101960 | Msa0613150 | 0.805086 | 1.581944e-49 | -8.615850e-47 |
| Msa0101960 | Msa0613420 | 0.883698 | 3.599644e-71 | -8.615850e-47 |
| Msa0101960 | Msa0619310 | 0.836819 | 7.484216e-57 | -8.615850e-47 |
| Msa0101960 | Msa0631130 | 0.827398 | 1.599716e-54 | -8.615850e-47 |
| Msa0101960 | Msa0635270 | 0.828232 | 1.008092e-54 | -8.615850e-47 |
| Msa0101960 | Msa0637930 | -0.808287 | 3.334960e-50 | -8.615850e-47 |
| Msa0101960 | Msa0641130 | 0.884854 | 1.343364e-71 | -8.615850e-47 |
| Msa0101960 | Msa0648950 | 0.806742 | 7.094995e-50 | -8.615850e-47 |
| Msa0101960 | Msa0650560 | 0.844527 | 7.155152e-59 | -8.615850e-47 |
| Msa0101960 | Msa0654640 | 0.811269 | 7.616598e-51 | -8.615850e-47 |
| Msa0101960 | Msa0654900 | 0.800753 | 1.242884e-48 | -8.615850e-47 |
| Msa0101960 | Msa0669350 | 0.802080 | 6.648702e-49 | -8.615850e-47 |
| Msa0101960 | Msa0679670 | 0.826219 | 3.059273e-54 | -8.615850e-47 |
| Msa0101960 | Msa0696380 | 0.818070 | 2.374289e-52 | -8.615850e-47 |
| Msa0101960 | Msa0697000 | 0.806626 | 7.507229e-50 | -8.615850e-47 |
| Msa0101960 | Msa0698450 | 0.809967 | 1.456586e-50 | -8.615850e-47 |
| Msa0101960 | Msa0703810 | 0.817509 | 3.178148e-52 | -8.615850e-47 |
| Msa0101960 | Msa0704680 | 0.817486 | 3.216921e-52 | -8.615850e-47 |
| Msa0101960 | Msa0715670 | 0.855190 | 7.447197e-62 | -8.615850e-47 |
| Msa0101960 | Msa0719900 | -0.842221 | 2.952461e-58 | -8.615850e-47 |
| Msa0101960 | Msa0723580 | 0.820596 | 6.310328e-53 | -8.615850e-47 |
| Msa0101960 | Msa0734940 | 0.827065 | 1.922234e-54 | -8.615850e-47 |
| Msa0101960 | Msa0740630 | 0.820924 | 5.302806e-53 | -8.615850e-47 |
| Msa0101960 | Msa0742430 | 0.846166 | 2.576381e-59 | -8.615850e-47 |
| Msa0101960 | Msa0744640 | 0.857478 | 1.588744e-62 | -8.615850e-47 |
| Msa0101960 | Msa0764070 | 0.856057 | 4.159315e-62 | -8.615850e-47 |
| Msa0101960 | Msa0775160 | 0.810920 | 9.068817e-51 | -8.615850e-47 |
| Msa0101960 | Msa0781330 | -0.816811 | 4.562656e-52 | -8.615850e-47 |
| Msa0101960 | Msa0788450 | -0.814776 | 1.296492e-51 | -8.615850e-47 |
| Msa0101960 | Msa0795340 | 0.845307 | 4.407865e-59 | -8.615850e-47 |
| Msa0101960 | Msa0804690 | -0.819179 | 1.330711e-52 | -8.615850e-47 |
| Msa0101960 | Msa0804870 | 0.817508 | 3.179625e-52 | -8.615850e-47 |
| Msa0101960 | Msa0805890 | 0.812111 | 4.996202e-51 | -8.615850e-47 |
| Msa0101960 | Msa0807020 | 0.833691 | 4.610470e-56 | -8.615850e-47 |
| Msa0101960 | Msa0809940 | 0.825631 | 4.218467e-54 | -8.615850e-47 |
| Msa0101960 | Msa0820880 | 0.821786 | 3.355671e-53 | -8.615850e-47 |
| Msa0101960 | Msa0823540 | 0.822557 | 2.222196e-53 | -8.615850e-47 |
| Msa0101960 | Msa0825570 | -0.814207 | 1.732639e-51 | -8.615850e-47 |
| Msa0101960 | Msa0826540 | -0.819471 | 1.141571e-52 | -8.615850e-47 |
| Msa0101960 | Msa0828200 | 0.810849 | 9.393103e-51 | -8.615850e-47 |
| Msa0101960 | Msa0829210 | -0.800849 | 1.188405e-48 | -8.615850e-47 |
| Msa0101960 | Msa0830030 | 0.836846 | 7.363929e-57 | -8.615850e-47 |
| Msa0101960 | Msa0832950 | 0.851052 | 1.140699e-60 | -8.615850e-47 |
| Msa0101960 | Msa0833270 | 0.866629 | 2.478742e-65 | -8.615850e-47 |
| Msa0101960 | Msa0841730 | 0.858072 | 1.058484e-62 | -8.615850e-47 |
| Msa0101960 | Msa0843700 | 0.806586 | 7.655455e-50 | -8.615850e-47 |
| Msa0101960 | Msa0852790 | 0.807122 | 5.897684e-50 | -8.615850e-47 |
| Msa0101960 | Msa0859040 | 0.838558 | 2.678486e-57 | -8.615850e-47 |
| Msa0101960 | Msa0862620 | 0.843606 | 1.263246e-58 | -8.615850e-47 |
| Msa0101960 | Msa0863990 | 0.820299 | 7.379530e-53 | -8.615850e-47 |
| Msa0101960 | Msa0864820 | -0.846441 | 2.167315e-59 | -8.615850e-47 |
| Msa0101960 | Msa0870510 | 0.832938 | 7.105282e-56 | -8.615850e-47 |
| Msa0101960 | Msa0882480 | -0.819168 | 1.338052e-52 | -8.615850e-47 |
| Msa0101960 | Msa0896530 | 0.800072 | 1.710649e-48 | -8.615850e-47 |
| Msa0101960 | Msa0901270 | 0.804745 | 1.864138e-49 | -8.615850e-47 |
| Msa0101960 | Msa0930740 | 0.830440 | 2.933144e-55 | -8.615850e-47 |
| Msa0101960 | Msa0966580 | 0.840479 | 8.484154e-58 | -8.615850e-47 |
| Msa0101960 | Msa0966590 | 0.803495 | 3.392750e-49 | -8.615850e-47 |
| Msa0101960 | Msa0968470 | -0.867002 | 1.885778e-65 | -8.615850e-47 |
| Msa0101960 | Msa1000800 | 0.829082 | 6.282007e-55 | -8.615850e-47 |
| Msa0101960 | Msa1001120 | 0.801833 | 7.470196e-49 | -8.615850e-47 |
| Msa0101960 | Msa1008390 | 0.815068 | 1.117229e-51 | -8.615850e-47 |
| Msa0101960 | Msa1011250 | 0.875226 | 3.641718e-68 | -8.615850e-47 |
| Msa0101960 | Msa1015880 | 0.827211 | 1.773560e-54 | -8.615850e-47 |
| Msa0101960 | Msa1016960 | 0.845063 | 5.128347e-59 | -8.615850e-47 |
| Msa0101960 | Msa1023310 | 0.809107 | 2.227758e-50 | -8.615850e-47 |
| Msa0101960 | Msa1026890 | 0.805752 | 1.147059e-49 | -8.615850e-47 |
| Msa0101960 | Msa1031460 | 0.872455 | 3.139645e-67 | -8.615850e-47 |
| Msa0101960 | Msa1038880 | 0.820682 | 6.027409e-53 | -8.615850e-47 |
| Msa0101960 | Msa1040960 | 0.853010 | 3.169549e-61 | -8.615850e-47 |
| Msa0101960 | Msa1058200 | 0.828908 | 6.921091e-55 | -8.615850e-47 |
| Msa0101960 | Msa1058320 | 0.804741 | 1.867513e-49 | -8.615850e-47 |
| Msa0101960 | Msa1059670 | 0.835539 | 1.582111e-56 | -8.615850e-47 |
| Msa0101960 | Msa1062040 | 0.822656 | 2.107613e-53 | -8.615850e-47 |
| Msa0101960 | Msa1062080 | 0.825102 | 5.630208e-54 | -8.615850e-47 |
| Msa0101960 | Msa1064240 | 0.810641 | 1.041743e-50 | -8.615850e-47 |
| Msa0101960 | Msa1070540 | 0.863195 | 2.961026e-64 | -8.615850e-47 |
| Msa0101960 | Msa1079720 | -0.815099 | 1.099636e-51 | -8.615850e-47 |
| Msa0101960 | Msa1080610 | -0.828875 | 7.050845e-55 | -8.615850e-47 |
| Msa0101960 | Msa1080680 | -0.830200 | 3.358280e-55 | -8.615850e-47 |
| Msa0101960 | Msa1082520 | 0.887639 | 1.196225e-72 | -8.615850e-47 |
| Msa0101960 | Msa1082600 | 0.856582 | 2.918584e-62 | -8.615850e-47 |
| Msa0101960 | Msa1084890 | 0.803068 | 4.157546e-49 | -8.615850e-47 |
| Msa0101960 | Msa1089190 | 0.814842 | 1.253872e-51 | -8.615850e-47 |
| Msa0101960 | Msa1098940 | 0.806594 | 7.626993e-50 | -8.615850e-47 |
| Msa0101960 | Msa1101240 | 0.864894 | 8.754328e-65 | -8.615850e-47 |
| Msa0101960 | Msa1104650 | 0.819234 | 1.292763e-52 | -8.615850e-47 |
| Msa0101960 | Msa1107200 | 0.809748 | 1.623520e-50 | -8.615850e-47 |
| Msa0101960 | Msa1109810 | 0.803140 | 4.017626e-49 | -8.615850e-47 |
| Msa0101960 | Msa1114670 | 0.803277 | 3.764144e-49 | -8.615850e-47 |
| Msa0101960 | Msa1124530 | -0.844827 | 5.940929e-59 | -8.615850e-47 |
| Msa0101960 | Msa1126320 | -0.825069 | 5.729208e-54 | -8.615850e-47 |
| Msa0101960 | Msa1131790 | 0.807453 | 5.016867e-50 | -8.615850e-47 |
| Msa0101960 | Msa1132980 | 0.827618 | 1.416472e-54 | -8.615850e-47 |
| Msa0101960 | Msa1140630 | 0.827361 | 1.632764e-54 | -8.615850e-47 |
| Msa0101960 | Msa1150780 | 0.819782 | 9.695518e-53 | -8.615850e-47 |
| Msa0101960 | Msa1154240 | 0.811919 | 5.503408e-51 | -8.615850e-47 |
| Msa0101960 | Msa1157110 | 0.813628 | 2.325344e-51 | -8.615850e-47 |
| Msa0101960 | Msa1159160 | 0.818218 | 2.198917e-52 | -8.615850e-47 |
| Msa0101960 | Msa1159170 | 0.839118 | 1.917957e-57 | -8.615850e-47 |
| Msa0101960 | Msa1160560 | 0.822681 | 2.079441e-53 | -8.615850e-47 |
| Msa0101960 | Msa1164720 | -0.824295 | 8.722089e-54 | -8.615850e-47 |
| Msa0101960 | Msa1165430 | 0.837652 | 4.580104e-57 | -8.615850e-47 |
| Msa0101960 | Msa1167150 | -0.834855 | 2.354529e-56 | -8.615850e-47 |
| Msa0101960 | Msa1168640 | 0.843329 | 1.498673e-58 | -8.615850e-47 |
| Msa0101960 | Msa1175100 | 0.819997 | 8.656545e-53 | -8.615850e-47 |
| Msa0101960 | Msa1180720 | 0.853223 | 2.754507e-61 | -8.615850e-47 |
| Msa0101960 | Msa1181140 | 0.842998 | 1.835947e-58 | -8.615850e-47 |
| Msa0101960 | Msa1208450 | -0.852232 | 5.285372e-61 | -8.615850e-47 |
| Msa0101960 | Msa1208990 | 0.872073 | 4.207237e-67 | -8.615850e-47 |
| Msa0101960 | Msa1214840 | 0.806782 | 6.958816e-50 | -8.615850e-47 |
| Msa0101960 | Msa1225580 | 0.834678 | 2.609268e-56 | -8.615850e-47 |
| Msa0101960 | Msa1231710 | 0.861529 | 9.620362e-64 | -8.615850e-47 |
| Msa0101960 | Msa1234470 | 0.814400 | 1.570631e-51 | -8.615850e-47 |
| Msa0101960 | Msa1236440 | 0.813118 | 3.009641e-51 | -8.615850e-47 |
| Msa0101960 | Msa1238600 | 0.813653 | 2.295553e-51 | -8.615850e-47 |
| Msa0101960 | Msa1239620 | 0.814475 | 1.511573e-51 | -8.615850e-47 |
| Msa0101960 | Msa1246780 | 0.801358 | 9.350322e-49 | -8.615850e-47 |
| Msa0101960 | Msa1246790 | 0.810113 | 1.354761e-50 | -8.615850e-47 |
| Msa0101960 | Msa1256060 | 0.882147 | 1.329485e-70 | -8.615850e-47 |
| Msa0101960 | Msa1262540 | 0.811921 | 5.495755e-51 | -8.615850e-47 |
| Msa0101960 | Msa1272010 | 0.832279 | 1.035120e-55 | -8.615850e-47 |
| Msa0101960 | Msa1275510 | 0.804408 | 2.191590e-49 | -8.615850e-47 |
| Msa0101960 | Msa1277670 | 0.822511 | 2.277658e-53 | -8.615850e-47 |
| Msa0101960 | Msa1281660 | 0.811858 | 5.673242e-51 | -8.615850e-47 |
| Msa0101960 | Msa1286210 | 0.800019 | 1.754060e-48 | -8.615850e-47 |
| Msa0101960 | Msa1289050 | 0.801476 | 8.845135e-49 | -8.615850e-47 |
| Msa0101960 | Msa1289090 | 0.815001 | 1.156321e-51 | -8.615850e-47 |
| Msa0101960 | Msa1296240 | 0.830916 | 2.243122e-55 | -8.615850e-47 |
| Msa0101960 | Msa1298390 | -0.869228 | 3.623811e-66 | -8.615850e-47 |
| Msa0101960 | Msa1306830 | 0.809442 | 1.888148e-50 | -8.615850e-47 |
| Msa0101960 | Msa1306960 | 0.812901 | 3.358102e-51 | -8.615850e-47 |
| Msa0101960 | Msa1312440 | 0.864423 | 1.229422e-64 | -8.615850e-47 |
| Msa0101960 | Msa1315480 | 0.835949 | 1.245417e-56 | -8.615850e-47 |
| Msa0101960 | Msa1320860 | 0.817423 | 3.323464e-52 | -8.615850e-47 |
| Msa0101960 | Msa1325560 | -0.810492 | 1.122394e-50 | -8.615850e-47 |
| Msa0101960 | Msa1355510 | 0.833390 | 5.482617e-56 | -8.615850e-47 |
| Msa0101960 | Msa1364080 | 0.811616 | 6.403467e-51 | -8.615850e-47 |
| Msa0101960 | Msa1365420 | -0.814595 | 1.422128e-51 | -8.615850e-47 |
| Msa0101960 | Msa1367790 | 0.818002 | 2.459897e-52 | -8.615850e-47 |
| Msa0101960 | Msa1368610 | 0.840540 | 8.177542e-58 | -8.615850e-47 |
| Msa0101960 | Msa1369920 | -0.824409 | 8.197268e-54 | -8.615850e-47 |
| Msa0101960 | Msa1375610 | -0.824964 | 6.068453e-54 | -8.615850e-47 |
| Msa0101960 | Msa1376550 | -0.808136 | 3.591670e-50 | -8.615850e-47 |
| Msa0101960 | Msa1379020 | 0.844661 | 6.584590e-59 | -8.615850e-47 |
| Msa0101960 | Msa1389170 | 0.809243 | 2.083116e-50 | -8.615850e-47 |
| Msa0101960 | Msa1395250 | 0.824342 | 8.504106e-54 | -8.615850e-47 |
| Msa0101960 | Msa1400200 | 0.822138 | 2.780889e-53 | -8.615850e-47 |
| Msa0101960 | Msa1404050 | 0.836489 | 9.080545e-57 | -8.615850e-47 |
| Msa0101960 | Msa1407760 | 0.825259 | 5.167849e-54 | -8.615850e-47 |
| Msa0101960 | Msa1407880 | 0.854601 | 1.104124e-61 | -8.615850e-47 |
| Msa0101960 | Msa1415410 | 0.840307 | 9.406124e-58 | -8.615850e-47 |
| Msa0101960 | Msa1419840 | 0.833007 | 6.827920e-56 | -8.615850e-47 |
| Msa0101960 | Msa1433410 | 0.802927 | 4.446335e-49 | -8.615850e-47 |
| Msa0101960 | Msa1435320 | 0.823384 | 1.425953e-53 | -8.615850e-47 |
| Msa0101960 | Msa1443400 | 0.827931 | 1.191087e-54 | -8.615850e-47 |
| Msa0101960 | Msa1447870 | 0.833697 | 4.594190e-56 | -8.615850e-47 |
| Msa0101960 | Msa1448040 | 0.827609 | 1.423707e-54 | -8.615850e-47 |
| Msa0101960 | Msa1450440 | 0.810344 | 1.208058e-50 | -8.615850e-47 |
| Msa0101960 | Msa1456000 | 0.820634 | 6.183300e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101960 | MtrunA17_Chr1g0153431 | 95.032 | 926 | 37 | 2 | 1 | 924 | 1 | 919 | 0.0 | 1705 |
| Msa0101960 | MtrunA17_Chr3g0133891 | 65.666 | 766 | 237 | 6 | 174 | 924 | 193 | 947 | 0.0 | 924 |
| Msa0101960 | MtrunA17_Chr8g0369191 | 48.023 | 683 | 290 | 12 | 253 | 921 | 3 | 634 | 3.14e-155 | 471 |
| Msa0101960 | MtrunA17_Chr3g0102681 | 26.868 | 696 | 424 | 17 | 256 | 924 | 4 | 641 | 3.72e-27 | 118 |
| Msa0101960 | MtrunA17_Chr2g0290651 | 26.325 | 604 | 375 | 17 | 259 | 839 | 7 | 563 | 5.53e-22 | 101 |
| Msa0101960 | MtrunA17_Chr4g0013151 | 32.075 | 265 | 174 | 2 | 580 | 843 | 229 | 488 | 5.48e-20 | 95.1 |
| Msa0101960 | MtrunA17_Chr7g0244501 | 31.086 | 267 | 174 | 6 | 581 | 845 | 177 | 435 | 7.51e-20 | 94.7 |
| Msa0101960 | MtrunA17_Chr7g0244501 | 43.925 | 107 | 56 | 3 | 267 | 369 | 18 | 124 | 5.94e-11 | 66.2 |
| Msa0101960 | MtrunA17_Chr5g0446731 | 27.177 | 379 | 245 | 7 | 279 | 645 | 21 | 380 | 1.51e-12 | 71.6 |
| Msa0101960 | MtrunA17_Chr3g0078801 | 27.632 | 380 | 242 | 9 | 279 | 645 | 21 | 380 | 4.42e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101960 | AT2G26570.1 | 61.087 | 699 | 235 | 11 | 250 | 919 | 115 | 805 | 0.0 | 759 |
| Msa0101960 | AT2G26570.2 | 61.087 | 699 | 235 | 11 | 250 | 919 | 115 | 805 | 0.0 | 759 |
| Msa0101960 | AT4G33390.1 | 58.269 | 647 | 244 | 6 | 278 | 919 | 153 | 778 | 0.0 | 643 |
| Msa0101960 | AT5G42880.1 | 46.429 | 672 | 300 | 8 | 264 | 919 | 121 | 748 | 5.63e-158 | 482 |
| Msa0101960 | AT1G45545.2 | 43.989 | 707 | 334 | 7 | 227 | 918 | 91 | 750 | 2.71e-149 | 460 |
| Msa0101960 | AT1G45545.1 | 43.989 | 707 | 334 | 7 | 227 | 918 | 90 | 749 | 3.32e-149 | 459 |
| Msa0101960 | AT5G55860.1 | 25.982 | 662 | 418 | 17 | 279 | 917 | 20 | 632 | 6.89e-15 | 79.3 |
Find 164 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTGGTTTACTACATTT+TGG | 0.153241 | 1_3:+8622507 | None:intergenic |
| GGGGCATCTGCTAGTGAATT+TGG | 0.237130 | 1_3:+8625221 | None:intergenic |
| GATCTAACGGCTTCATCTTC+TGG | 0.244045 | 1_3:-8624490 | Msa0101960:CDS |
| AGACTCCATCGTCTCCTTCT+TGG | 0.244813 | 1_3:+8623398 | None:intergenic |
| TTCTGAGGTAAATTACTTAA+AGG | 0.258185 | 1_3:-8623275 | Msa0101960:CDS |
| GGTCATGCAAACAATGAAAA+TGG | 0.264151 | 1_3:-8622407 | Msa0101960:CDS |
| CGGAGAAAAGCCGGTGAAAT+AGG | 0.268026 | 1_3:-8622530 | Msa0101960:CDS |
| GATTGCCACAAAAGAGTCTT+TGG | 0.270589 | 1_3:-8623656 | Msa0101960:CDS |
| TCATGAACTGTTTCTTCTTT+CGG | 0.275067 | 1_3:+8624984 | None:intergenic |
| GCTTCTTTAGTTGATGAAAA+AGG | 0.275514 | 1_3:-8623760 | Msa0101960:CDS |
| AAGGAAGCTGTTTCTAAGTT+TGG | 0.278467 | 1_3:-8624307 | Msa0101960:CDS |
| AAAGCACATCCAACTCATTC+AGG | 0.287960 | 1_3:-8622305 | Msa0101960:CDS |
| TTTCAATTCTTAATCATAAT+AGG | 0.296039 | 1_3:+8625669 | None:intergenic |
| GACGCTTCTTGAAGCTTCTT+TGG | 0.305159 | 1_3:+8623067 | None:intergenic |
| GAGATCAAGATTCTCTCAAT+TGG | 0.317442 | 1_3:-8623573 | Msa0101960:CDS |
| AGCTGAGTTAAATGCCTATA+TGG | 0.326058 | 1_3:-8623434 | Msa0101960:CDS |
| TACCACTATGATTTATGTTC+TGG | 0.328707 | 1_3:+8622492 | None:intergenic |
| TGCCGTTGCAATTCTCGAAT+TGG | 0.338661 | 1_3:+8622739 | None:intergenic |
| TTTATCATCTAGTGAGTTGA+TGG | 0.341644 | 1_3:+8625139 | None:intergenic |
| AGCAGTTGAGTCGGCCAAAA+AGG | 0.354376 | 1_3:-8623335 | Msa0101960:CDS |
| ATCACTAACATGTACAAGTA+TGG | 0.361225 | 1_3:+8622187 | None:intergenic |
| AAGGCAAGGGAAGGAAAATT+AGG | 0.367717 | 1_3:-8622596 | Msa0101960:CDS |
| GTTTGACTTTGATTCCATAT+AGG | 0.370779 | 1_3:+8623420 | None:intergenic |
| AAAATTGTACGAGGAGATTC+CGG | 0.373780 | 1_3:-8624088 | Msa0101960:CDS |
| GATAGTATCACACCATTTGA+TGG | 0.385892 | 1_3:+8622815 | None:intergenic |
| TGTGTATAGCCATTGAATTT+CGG | 0.387944 | 1_3:-8622047 | Msa0101960:three_prime_UTR |
| GCTTCAACTGTTACTGTTAA+CGG | 0.395660 | 1_3:-8624888 | Msa0101960:CDS |
| TTGCCTTGCTTGATGCTCTT+CGG | 0.398129 | 1_3:+8623951 | None:intergenic |
| GGCACTCGTATACCTTGCTT+TGG | 0.399846 | 1_3:+8623837 | None:intergenic |
| GAATTGAAAGCTTGCAGAAA+GGG | 0.400309 | 1_3:-8625655 | Msa0101960:five_prime_UTR |
| CGATGCAGCAACAGCATCTT+CGG | 0.403753 | 1_3:+8623720 | None:intergenic |
| CTTCGGTTTGTGCCCTCTCT+AGG | 0.404658 | 1_3:+8623968 | None:intergenic |
| ATCTGCACATTCTGCACATA+TGG | 0.405198 | 1_3:-8623632 | Msa0101960:CDS |
| TTCGATGGAAGAGTCATTAT+CGG | 0.407175 | 1_3:+8625166 | None:intergenic |
| ATGCATATAAACAACCTTTA+GGG | 0.408601 | 1_3:+8624799 | None:intergenic |
| GGTTGGAGCTGTTATTATAT+CGG | 0.413352 | 1_3:+8625187 | None:intergenic |
| AGCGTCTGAAGAGGCGAATA+TGG | 0.414635 | 1_3:-8623050 | Msa0101960:CDS |
| GCTTCTGATGAACAATCTAT+AGG | 0.415441 | 1_3:-8625047 | Msa0101960:CDS |
| GTTGAGATGTCTCCTGTTGC+AGG | 0.416977 | 1_3:+8625698 | None:intergenic |
| GGCTGCCACACTGGAATCTT+CGG | 0.417044 | 1_3:+8623879 | None:intergenic |
| ACAAAGAAATAGTTGCTAGA+AGG | 0.418428 | 1_3:-8622652 | Msa0101960:CDS |
| AATCTGTAACCACAGGTTCC+TGG | 0.423293 | 1_3:+8624593 | None:intergenic |
| TTGTCTTCAACTTCCTCCAT+TGG | 0.430502 | 1_3:+8625269 | None:intergenic |
| CGAGCTGAACAAAACTAAAT+CGG | 0.430709 | 1_3:-8623146 | Msa0101960:CDS |
| GGCAACCTCGAGTTGCGCCT+TGG | 0.433398 | 1_3:+8623858 | None:intergenic |
| TGGAGTCTCAAAGGAGCAAC+TGG | 0.446054 | 1_3:-8623383 | Msa0101960:CDS |
| CGATGTTGATCATAATCATA+TGG | 0.453913 | 1_3:-8624865 | Msa0101960:CDS |
| TAGATTACTTGCAGCTCAAA+AGG | 0.454559 | 1_3:-8622936 | Msa0101960:CDS |
| TTACAGAAGCCGAAATTCAA+TGG | 0.458957 | 1_3:+8622038 | None:intergenic |
| TAAAGCTTCAAGTTCAGAAT+CGG | 0.460892 | 1_3:+8624929 | None:intergenic |
| TAGAGCAAGAATTAAGAAAG+TGG | 0.463769 | 1_3:-8622571 | Msa0101960:CDS |
| TCAACATTTCTTGAGGAGGT+TGG | 0.463850 | 1_3:+8625245 | None:intergenic |
| CAAAGAAATAGTTGCTAGAA+GGG | 0.465795 | 1_3:-8622651 | Msa0101960:CDS |
| TTGCGCCTTGGCTGCCACAC+TGG | 0.466144 | 1_3:+8623870 | None:intergenic |
| AAGAAAATTGCTGAAAATAG+AGG | 0.467267 | 1_3:-8624364 | Msa0101960:CDS |
| GAAGCTGTTTCTAAGTTTGG+AGG | 0.479133 | 1_3:-8624304 | Msa0101960:CDS |
| CACCGATGTTAACTCTGTAA+TGG | 0.484336 | 1_3:+8623816 | None:intergenic |
| TGCAAGAGCTTCTGAAAGGT+TGG | 0.484392 | 1_3:-8622903 | Msa0101960:CDS |
| GAGAAGCTTGTGAAGTGCTT+AGG | 0.488597 | 1_3:-8623012 | Msa0101960:CDS |
| GCATCAATAACTTCGGTTTG+AGG | 0.490058 | 1_3:+8624676 | None:intergenic |
| TGAAGTGCTTAGGAGAGTAA+AGG | 0.495073 | 1_3:-8623002 | Msa0101960:CDS |
| AATCGGCAGCTATGGCTCCT+AGG | 0.499690 | 1_3:+8624946 | None:intergenic |
| CATTGTACTAGCACCAGCCT+TGG | 0.500187 | 1_3:+8622964 | None:intergenic |
| GAAGCTTCTTTGGCAGCTCA+AGG | 0.501880 | 1_3:+8623077 | None:intergenic |
| GGACTTGAAAAGTAATGTAC+AGG | 0.501997 | 1_3:+8622440 | None:intergenic |
| TGATAATCACATGGATCTAA+CGG | 0.503541 | 1_3:-8624503 | Msa0101960:CDS |
| GGAATTAAGTTCATCACCCT+TGG | 0.504644 | 1_3:-8622110 | Msa0101960:three_prime_UTR |
| AATGAAGTGGATCCATCAAA+TGG | 0.505603 | 1_3:-8622827 | Msa0101960:CDS |
| AGATCAAGATTCTCTCAATT+GGG | 0.505960 | 1_3:-8623572 | Msa0101960:CDS |
| AAAGCTCAGAGTGGAAGAAA+TGG | 0.509731 | 1_3:-8623914 | Msa0101960:CDS |
| AATCATCGCTTGCCTCGATT+AGG | 0.512741 | 1_3:-8623213 | Msa0101960:CDS |
| ACGAGGAGATTCCGGAGTAC+AGG | 0.513676 | 1_3:-8624080 | Msa0101960:CDS |
| GAATGATCACAAAGAACTAA+AGG | 0.515894 | 1_3:-8624452 | Msa0101960:CDS |
| AACTTCAGCATCTGAGGTTG+AGG | 0.515980 | 1_3:+8624636 | None:intergenic |
| AAGTTCAGAATCGGCAGCTA+TGG | 0.516741 | 1_3:+8624938 | None:intergenic |
| AGTGCTTAGGAGAGTAAAGG+AGG | 0.520512 | 1_3:-8622999 | Msa0101960:CDS |
| GAAGCAGAAGAACACAGAAT+AGG | 0.520706 | 1_3:-8623610 | Msa0101960:CDS |
| AGAACATACCCTGATTAAGC+AGG | 0.522764 | 1_3:+8626099 | None:intergenic |
| AGATTCCAGTGTGGCAGCCA+AGG | 0.524007 | 1_3:-8623875 | Msa0101960:CDS |
| TGAGTTGATGGAAGCTTCGA+TGG | 0.525513 | 1_3:+8625151 | None:intergenic |
| ACATCAGGAATCTTGATTTG+AGG | 0.528054 | 1_3:+8624421 | None:intergenic |
| TGGATAAATCTGAGAAGGCA+AGG | 0.529566 | 1_3:-8622610 | Msa0101960:CDS |
| TGTTCAGAATCTGTAACCAC+AGG | 0.530763 | 1_3:+8624586 | None:intergenic |
| TGGAGGAATTGTCGATTGGA+AGG | 0.530992 | 1_3:-8624287 | Msa0101960:CDS |
| AACTTCATTCAACTTCTCCA+TGG | 0.531531 | 1_3:+8622676 | None:intergenic |
| CATGGACAACGGAGAAAAGC+CGG | 0.537596 | 1_3:-8622539 | Msa0101960:CDS |
| ACACTTCCATCAGCAACATC+AGG | 0.542110 | 1_3:+8624406 | None:intergenic |
| GGAATCATTGAAGATTGCTA+TGG | 0.544639 | 1_3:-8622630 | Msa0101960:CDS |
| TTGAGCAGCATCAATAACTT+CGG | 0.545249 | 1_3:+8624669 | None:intergenic |
| TCCTCACCGGATGTGAAAAG+TGG | 0.546596 | 1_3:-8622383 | Msa0101960:CDS |
| TGTCAAGCTCCTGAAGTACT+TGG | 0.546825 | 1_3:+8624025 | None:intergenic |
| ATGGAAGAGTCATTATCGGT+TGG | 0.547014 | 1_3:+8625170 | None:intergenic |
| AGAATTGAAAGCTTGCAGAA+AGG | 0.548483 | 1_3:-8625656 | Msa0101960:five_prime_UTR |
| AGGAGACGATGGAGTCTCAA+AGG | 0.549934 | 1_3:-8623392 | Msa0101960:CDS |
| CAACTCTTCTGTTACAGAAG+AGG | 0.555295 | 1_3:+8624830 | None:intergenic |
| GTTTGCATGACCATAAGACT+TGG | 0.556311 | 1_3:+8622418 | None:intergenic |
| AAGCACATCCAACTCATTCA+GGG | 0.559299 | 1_3:-8622304 | Msa0101960:CDS |
| AGTTTGGAGGAATTGTCGAT+TGG | 0.559426 | 1_3:-8624291 | Msa0101960:CDS |
| GAAGCAGAACAAGCCAAGGC+TGG | 0.560630 | 1_3:-8622977 | Msa0101960:CDS |
| TGGTTCAACATTTCTTGAGG+AGG | 0.561487 | 1_3:+8625241 | None:intergenic |
| TGATATTGTGAACATGCATA+AGG | 0.563041 | 1_3:-8624551 | Msa0101960:CDS |
| TTCTGAGATCGATATAGCTA+AGG | 0.564068 | 1_3:-8622714 | Msa0101960:CDS |
| TGAGGTAAATTACTTAAAGG+TGG | 0.567020 | 1_3:-8623272 | Msa0101960:CDS |
| AACTCGAGGTTGCCAAAGCA+AGG | 0.569107 | 1_3:-8623849 | Msa0101960:CDS |
| GGAGACTGAATTGAAAACCA+TGG | 0.569236 | 1_3:-8622693 | Msa0101960:CDS |
| AAGATTCCTGATGTTGCTGA+TGG | 0.570955 | 1_3:-8624412 | Msa0101960:CDS |
| AAGATTCTCTCAATTGGGAG+AGG | 0.572141 | 1_3:-8623567 | Msa0101960:CDS |
| GATTAGGCAAAGAGAGGGAA+TGG | 0.573233 | 1_3:-8623197 | Msa0101960:CDS |
| GCTTCAAGAAGCGTCTGAAG+AGG | 0.573977 | 1_3:-8623059 | Msa0101960:CDS |
| AACTAAAACTGAGCCTAGAG+AGG | 0.574371 | 1_3:-8623981 | Msa0101960:CDS |
| AACCAGAACATAAATCATAG+TGG | 0.575238 | 1_3:-8622494 | Msa0101960:CDS |
| ATCAAATGGTGTGATACTAT+CGG | 0.575258 | 1_3:-8622813 | Msa0101960:CDS |
| CGAGTTAGATTCGTTGCGTG+TGG | 0.575491 | 1_3:-8623788 | Msa0101960:CDS |
| ATTTGGTTCAACATTTCTTG+AGG | 0.575747 | 1_3:+8625238 | None:intergenic |
| TACATGAACTTCAGCATCTG+AGG | 0.576726 | 1_3:+8624630 | None:intergenic |
| TGCTATGGATAAATCTGAGA+AGG | 0.581662 | 1_3:-8622615 | Msa0101960:CDS |
| GGCAGCCAAGGCGCAACTCG+AGG | 0.584945 | 1_3:-8623863 | Msa0101960:CDS |
| GAATCAAAGTCAAACCAAGA+AGG | 0.585631 | 1_3:-8623412 | Msa0101960:CDS |
| TTTGCATGACCATAAGACTT+GGG | 0.589944 | 1_3:+8622419 | None:intergenic |
| CAATGAAAATGGATCCTCAC+CGG | 0.594662 | 1_3:-8622396 | Msa0101960:CDS |
| AGCTTCTCGAGCAAGCAAGT+TGG | 0.594786 | 1_3:+8623027 | None:intergenic |
| AAACCGAAGAGCATCAAGCA+AGG | 0.595409 | 1_3:-8623954 | Msa0101960:CDS |
| AGTGACTACCCTGAATGAGT+TGG | 0.597230 | 1_3:+8622296 | None:intergenic |
| GGATAAATCTGAGAAGGCAA+GGG | 0.599722 | 1_3:-8622609 | Msa0101960:CDS |
| TCCCTCTCTTTGCCTAATCG+AGG | 0.600136 | 1_3:+8623201 | None:intergenic |
| AGCTCCATTCGAATCTGTCA+AGG | 0.606757 | 1_3:-8624326 | Msa0101960:CDS |
| AGATTCTCTCAATTGGGAGA+GGG | 0.608093 | 1_3:-8623566 | Msa0101960:CDS |
| AGAAAGTGGAGAGCAGAACA+TGG | 0.609255 | 1_3:-8622557 | Msa0101960:CDS |
| GCCTCGATTAGGCAAAGAGA+GGG | 0.612208 | 1_3:-8623202 | Msa0101960:CDS |
| GGAGGAAGCAGAACAAGCCA+AGG | 0.613105 | 1_3:-8622981 | Msa0101960:CDS |
| AAGCTGCAAGAGCTTCTGAA+AGG | 0.613956 | 1_3:-8622907 | Msa0101960:CDS |
| TATTTGATTTCAGCGAAGCA+AGG | 0.615921 | 1_3:-8624130 | Msa0101960:intron |
| GCTTTAGAAGATATACAAGA+TGG | 0.618193 | 1_3:-8624912 | Msa0101960:CDS |
| AGCCAATTCGAGAATTGCAA+CGG | 0.618494 | 1_3:-8622741 | Msa0101960:CDS |
| ATCGAAGCAAGTGGAAAAGA+CGG | 0.619879 | 1_3:-8623701 | Msa0101960:CDS |
| TCCGGAGTACAGGAAAAGAT+CGG | 0.623837 | 1_3:-8624070 | Msa0101960:CDS |
| GAGTTGCAGATTGACCCTAA+AGG | 0.624207 | 1_3:-8624813 | Msa0101960:intron |
| GCTTCCTTGACAGATTCGAA+TGG | 0.625828 | 1_3:+8624322 | None:intergenic |
| AAATCTGAGAAGGCAAGGGA+AGG | 0.626732 | 1_3:-8622605 | Msa0101960:CDS |
| CATAGAGAAAGCTACTTCTG+AGG | 0.629665 | 1_3:-8623290 | Msa0101960:CDS |
| TCAAACCAAGAAGGAGACGA+TGG | 0.635731 | 1_3:-8623403 | Msa0101960:CDS |
| TAGAAGCAACAACAATGAAG+TGG | 0.641955 | 1_3:-8622840 | Msa0101960:CDS |
| AATGCAAGCAGCAGTTGAGT+CGG | 0.646409 | 1_3:-8623344 | Msa0101960:CDS |
| ACACAGAATAGGAACAGTCA+TGG | 0.648205 | 1_3:-8623599 | Msa0101960:CDS |
| TGCCTCGATTAGGCAAAGAG+AGG | 0.654005 | 1_3:-8623203 | Msa0101960:CDS |
| TGTAACAGAACAAAGTCACC+AGG | 0.655246 | 1_3:-8624611 | Msa0101960:CDS |
| AGAACTTGCAAAGCTCAGAG+TGG | 0.657807 | 1_3:-8623923 | Msa0101960:CDS |
| GATAGACGCAACTGTAATCG+AGG | 0.658612 | 1_3:+8623174 | None:intergenic |
| ACAAAGTCACCAGGAACCTG+TGG | 0.660157 | 1_3:-8624602 | Msa0101960:CDS |
| CGGCAGCTATGGCTCCTAGG+TGG | 0.667123 | 1_3:+8624949 | None:intergenic |
| ACTAAAACTGAGCCTAGAGA+GGG | 0.671828 | 1_3:-8623980 | Msa0101960:CDS |
| AGAGTGGAAGAAATGGAGCA+AGG | 0.675194 | 1_3:-8623907 | Msa0101960:CDS |
| TTGAGATGTCTCCTGTTGCA+GGG | 0.677433 | 1_3:+8625699 | None:intergenic |
| GTGAACATGCATAAGGATGG+TGG | 0.677588 | 1_3:-8624544 | Msa0101960:CDS |
| ATTGTGAACATGCATAAGGA+TGG | 0.682817 | 1_3:-8624547 | Msa0101960:CDS |
| TGTTGCTGCATCGAAGCAAG+TGG | 0.684932 | 1_3:-8623710 | Msa0101960:CDS |
| AAGATTGAGATATACCTCGA+CGG | 0.686708 | 1_3:+8624249 | None:intergenic |
| GAAACAGAAGAAAACCACCT+AGG | 0.696012 | 1_3:-8624963 | Msa0101960:CDS |
| TCATCGAATGATAGCCGTCG+AGG | 0.697705 | 1_3:-8624263 | Msa0101960:intron |
| AGCATTGCAAGAGAGCGAGT+CGG | 0.699995 | 1_3:-8622864 | Msa0101960:CDS |
| GGAGAGCAGAACATGGACAA+CGG | 0.701482 | 1_3:-8622550 | Msa0101960:CDS |
| GGAGTACAGGAAAAGATCGG+AGG | 0.701685 | 1_3:-8624067 | Msa0101960:CDS |
| TGCCATTACAGAGTTAACAT+CGG | 0.702576 | 1_3:-8623818 | Msa0101960:CDS |
| TATTGCCGAAGATTCCAGTG+TGG | 0.782850 | 1_3:-8623884 | Msa0101960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATAACAAAAGT+AGG | + | chr1_3:8622132-8622151 | None:intergenic | 15.0% |
| !!! | TGATATAATTATTTCTCATA+TGG | - | chr1_3:8622349-8622368 | Msa0101960:CDS | 15.0% |
| !! | TTTCAATTCTTAATCATAAT+AGG | + | chr1_3:8622531-8622550 | None:intergenic | 15.0% |
| !!! | GAATATATCTGAATTATTTT+AGG | - | chr1_3:8622570-8622589 | Msa0101960:CDS | 15.0% |
| !! | AAAAAATGAAGCAAAAAACT+TGG | + | chr1_3:8622191-8622210 | None:intergenic | 20.0% |
| !!! | ATTATGAATTTTTTGCAACA+TGG | + | chr1_3:8622263-8622282 | None:intergenic | 20.0% |
| !! | TATTATAGCCAAAAAAATTC+TGG | - | chr1_3:8622283-8622302 | Msa0101960:exon | 20.0% |
| !! | TAATAATTCTCTAGCAAATT+TGG | - | chr1_3:8622374-8622393 | Msa0101960:CDS | 20.0% |
| !!! | GAGTTTAGTCAATTTTTATA+TGG | + | chr1_3:8622460-8622479 | None:intergenic | 20.0% |
| !! | AGAATAATGACATATACAAT+AGG | + | chr1_3:8622655-8622674 | None:intergenic | 20.0% |
| !! | AATTTGAATATGTATGCATA+GGG | - | chr1_3:8622733-8622752 | Msa0101960:CDS | 20.0% |
| !! | GTGATTATCAAAAAAACTAT+CGG | + | chr1_3:8623684-8623703 | None:intergenic | 20.0% |
| !!! | TAGTTTTTTTGATAATCACA+TGG | - | chr1_3:8623685-8623704 | Msa0101960:CDS | 20.0% |
| !!! | TCAAAAAATTTTGTTTGCTA+AGG | - | chr1_3:8624691-8624710 | Msa0101960:CDS | 20.0% |
| !!! | TTTGCAAACCAGAATTTTTT+TGG | + | chr1_3:8622294-8622313 | None:intergenic | 25.0% |
| !! | AACCTAGTGATAGTAATTTT+AGG | - | chr1_3:8622707-8622726 | Msa0101960:CDS | 25.0% |
| ! | AACCTAAAATTACTATCACT+AGG | + | chr1_3:8622712-8622731 | None:intergenic | 25.0% |
| ! | CAATTTGAATATGTATGCAT+AGG | - | chr1_3:8622732-8622751 | Msa0101960:CDS | 25.0% |
| !! | CTCAATTTCTTTTTAACCAA+TGG | - | chr1_3:8622912-8622931 | Msa0101960:CDS | 25.0% |
| !! | AATTTCTTTTTAACCAATGG+AGG | - | chr1_3:8622915-8622934 | Msa0101960:CDS | 25.0% |
| !! | TTATATCGGTATTTTCTTGA+GGG | + | chr1_3:8622999-8623018 | None:intergenic | 25.0% |
| !! | ATTATATCGGTATTTTCTTG+AGG | + | chr1_3:8623000-8623019 | None:intergenic | 25.0% |
| ! | ATGCATATAAACAACCTTTA+GGG | + | chr1_3:8623401-8623420 | None:intergenic | 25.0% |
| ! | AAGAAAATTGCTGAAAATAG+AGG | - | chr1_3:8623833-8623852 | Msa0101960:CDS | 25.0% |
| ! | TGAAACAATCGAAATTGAAA+CGG | + | chr1_3:8624043-8624062 | None:intergenic | 25.0% |
| !!! | TTCTGAGGTAAATTACTTAA+AGG | - | chr1_3:8624922-8624941 | Msa0101960:CDS | 25.0% |
| !! | AAAAATCACATAGTGGAAAT+TGG | + | chr1_3:8626059-8626078 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTTTCTCACCAA+GGG | + | chr1_3:8626106-8626125 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTTTTTCTCACCA+AGG | + | chr1_3:8626107-8626126 | None:intergenic | 25.0% |
| ! | AATTTTCTTCCTGCTTAATC+AGG | - | chr1_3:8622089-8622108 | Msa0101960:three_prime_UTR | 30.0% |
| ! | ATTTTCTTCCTGCTTAATCA+GGG | - | chr1_3:8622090-8622109 | Msa0101960:three_prime_UTR | 30.0% |
| !! | AAATTCTGGTTTGCAAAGTT+TGG | - | chr1_3:8622297-8622316 | Msa0101960:exon | 30.0% |
| GTTTATGAAATTGCTTCTTC+TGG | - | chr1_3:8622620-8622639 | Msa0101960:CDS | 30.0% | |
| ! | ACTTGCCTTTTAGATACTTT+TGG | - | chr1_3:8622885-8622904 | Msa0101960:CDS | 30.0% |
| ! | ATTTGGTTCAACATTTCTTG+AGG | + | chr1_3:8622962-8622981 | None:intergenic | 30.0% |
| ! | TATATCGGTATTTTCTTGAG+GGG | + | chr1_3:8622998-8623017 | None:intergenic | 30.0% |
| ! | TTTATCATCTAGTGAGTTGA+TGG | + | chr1_3:8623061-8623080 | None:intergenic | 30.0% |
| ! | TCATGAACTGTTTCTTCTTT+CGG | + | chr1_3:8623216-8623235 | None:intergenic | 30.0% |
| ! | TAAAGCTTCAAGTTCAGAAT+CGG | + | chr1_3:8623271-8623290 | None:intergenic | 30.0% |
| !! | GCTTTAGAAGATATACAAGA+TGG | - | chr1_3:8623285-8623304 | Msa0101960:CDS | 30.0% |
| CGATGTTGATCATAATCATA+TGG | - | chr1_3:8623332-8623351 | Msa0101960:CDS | 30.0% | |
| CATGCATATAAACAACCTTT+AGG | + | chr1_3:8623402-8623421 | None:intergenic | 30.0% | |
| TGATATTGTGAACATGCATA+AGG | - | chr1_3:8623646-8623665 | Msa0101960:CDS | 30.0% | |
| TGATAATCACATGGATCTAA+CGG | - | chr1_3:8623694-8623713 | Msa0101960:CDS | 30.0% | |
| GAATGATCACAAAGAACTAA+AGG | - | chr1_3:8623745-8623764 | Msa0101960:CDS | 30.0% | |
| ! | GCAATTTTCTTCTCATTTGT+AGG | + | chr1_3:8623824-8623843 | None:intergenic | 30.0% |
| TTTGAGCAAAACACAAAGAA+AGG | + | chr1_3:8623975-8623994 | None:intergenic | 30.0% | |
| CATGAAGAAGTTAAGTATTC+AGG | + | chr1_3:8624002-8624021 | None:intergenic | 30.0% | |
| !! | TACTTGGACTTTTTCTTGTT+CGG | + | chr1_3:8624159-8624178 | None:intergenic | 30.0% |
| !! | GCTTCTTTAGTTGATGAAAA+AGG | - | chr1_3:8624437-8624456 | Msa0101960:CDS | 30.0% |
| AGATCAAGATTCTCTCAATT+GGG | - | chr1_3:8624625-8624644 | Msa0101960:CDS | 30.0% | |
| ! | GTTTGACTTTGATTCCATAT+AGG | + | chr1_3:8624780-8624799 | None:intergenic | 30.0% |
| !! | TACTTCTTCAAGTTCCTTTT+TGG | + | chr1_3:8624879-8624898 | None:intergenic | 30.0% |
| TGAGGTAAATTACTTAAAGG+TGG | - | chr1_3:8624925-8624944 | Msa0101960:CDS | 30.0% | |
| !! | TATTGCTTTTGTTCAGATGA+AGG | - | chr1_3:8625075-8625094 | Msa0101960:CDS | 30.0% |
| ATCAAATGGTGTGATACTAT+CGG | - | chr1_3:8625384-8625403 | Msa0101960:intron | 30.0% | |
| ACAAAGAAATAGTTGCTAGA+AGG | - | chr1_3:8625545-8625564 | Msa0101960:intron | 30.0% | |
| CAAAGAAATAGTTGCTAGAA+GGG | - | chr1_3:8625546-8625565 | Msa0101960:intron | 30.0% | |
| TAGAGCAAGAATTAAGAAAG+TGG | - | chr1_3:8625626-8625645 | Msa0101960:intron | 30.0% | |
| !!! | TGTTCTGGTTTACTACATTT+TGG | + | chr1_3:8625693-8625712 | None:intergenic | 30.0% |
| AACCAGAACATAAATCATAG+TGG | - | chr1_3:8625703-8625722 | Msa0101960:five_prime_UTR | 30.0% | |
| TACCACTATGATTTATGTTC+TGG | + | chr1_3:8625708-8625727 | None:intergenic | 30.0% | |
| ATCACTAACATGTACAAGTA+TGG | + | chr1_3:8626013-8626032 | None:intergenic | 30.0% | |
| ! | TGATTTTGCAGTATTGTGAA+TGG | - | chr1_3:8626029-8626048 | Msa0101960:intron | 30.0% |
| ! | TTTCCACTATGTGATTTTTG+AGG | - | chr1_3:8626060-8626079 | Msa0101960:intron | 30.0% |
| ! | CCTTGAAAAAAGAAGCACAA+AGG | + | chr1_3:8622166-8622185 | None:intergenic | 35.0% |
| !!! | CCTTTGTGCTTCTTTTTTCA+AGG | - | chr1_3:8622163-8622182 | Msa0101960:three_prime_UTR | 35.0% |
| AGAATTGAAAGCTTGCAGAA+AGG | - | chr1_3:8622541-8622560 | Msa0101960:CDS | 35.0% | |
| GAATTGAAAGCTTGCAGAAA+GGG | - | chr1_3:8622542-8622561 | Msa0101960:CDS | 35.0% | |
| !! | GAGTGCCAAAAGTATCTAAA+AGG | + | chr1_3:8622893-8622912 | None:intergenic | 35.0% |
| GGTTGGAGCTGTTATTATAT+CGG | + | chr1_3:8623013-8623032 | None:intergenic | 35.0% | |
| TTCGATGGAAGAGTCATTAT+CGG | + | chr1_3:8623034-8623053 | None:intergenic | 35.0% | |
| GCTTCTGATGAACAATCTAT+AGG | - | chr1_3:8623150-8623169 | Msa0101960:CDS | 35.0% | |
| GCTTCAACTGTTACTGTTAA+CGG | - | chr1_3:8623309-8623328 | Msa0101960:CDS | 35.0% | |
| TTGAGCAGCATCAATAACTT+CGG | + | chr1_3:8623531-8623550 | None:intergenic | 35.0% | |
| ATTGTGAACATGCATAAGGA+TGG | - | chr1_3:8623650-8623669 | Msa0101960:CDS | 35.0% | |
| ! | ACATCAGGAATCTTGATTTG+AGG | + | chr1_3:8623779-8623798 | None:intergenic | 35.0% |
| !! | AAGGAAGCTGTTTCTAAGTT+TGG | - | chr1_3:8623890-8623909 | Msa0101960:CDS | 35.0% |
| AAGATTGAGATATACCTCGA+CGG | + | chr1_3:8623951-8623970 | None:intergenic | 35.0% | |
| ! | TATTTGATTTCAGCGAAGCA+AGG | - | chr1_3:8624067-8624086 | Msa0101960:CDS | 35.0% |
| ACAGCTTGAAAAATTGTACG+AGG | - | chr1_3:8624100-8624119 | Msa0101960:CDS | 35.0% | |
| AAAATTGTACGAGGAGATTC+CGG | - | chr1_3:8624109-8624128 | Msa0101960:CDS | 35.0% | |
| AGAAAAAGTCCAAGTACTTC+AGG | - | chr1_3:8624163-8624182 | Msa0101960:intron | 35.0% | |
| TGCCATTACAGAGTTAACAT+CGG | - | chr1_3:8624379-8624398 | Msa0101960:CDS | 35.0% | |
| ! | AGATTCCAAAGACTCTTTTG+TGG | + | chr1_3:8624549-8624568 | None:intergenic | 35.0% |
| GAGATCAAGATTCTCTCAAT+TGG | - | chr1_3:8624624-8624643 | Msa0101960:CDS | 35.0% | |
| AGCTGAGTTAAATGCCTATA+TGG | - | chr1_3:8624763-8624782 | Msa0101960:intron | 35.0% | |
| GAATCAAAGTCAAACCAAGA+AGG | - | chr1_3:8624785-8624804 | Msa0101960:intron | 35.0% | |
| CGAGCTGAACAAAACTAAAT+CGG | - | chr1_3:8625051-8625070 | Msa0101960:CDS | 35.0% | |
| GTTCAGATGAAGGAAAAAGA+AGG | - | chr1_3:8625085-8625104 | Msa0101960:CDS | 35.0% | |
| TAGATTACTTGCAGCTCAAA+AGG | - | chr1_3:8625261-8625280 | Msa0101960:CDS | 35.0% | |
| TAGAAGCAACAACAATGAAG+TGG | - | chr1_3:8625357-8625376 | Msa0101960:intron | 35.0% | |
| AATGAAGTGGATCCATCAAA+TGG | - | chr1_3:8625370-8625389 | Msa0101960:intron | 35.0% | |
| GATAGTATCACACCATTTGA+TGG | + | chr1_3:8625385-8625404 | None:intergenic | 35.0% | |
| !! | TTCTGAGATCGATATAGCTA+AGG | - | chr1_3:8625483-8625502 | Msa0101960:intron | 35.0% |
| AACTTCATTCAACTTCTCCA+TGG | + | chr1_3:8625524-8625543 | None:intergenic | 35.0% | |
| GGAATCATTGAAGATTGCTA+TGG | - | chr1_3:8625567-8625586 | Msa0101960:intron | 35.0% | |
| TGCTATGGATAAATCTGAGA+AGG | - | chr1_3:8625582-8625601 | Msa0101960:intron | 35.0% | |
| !! | TACATTTTGGCCTATTTCAC+CGG | + | chr1_3:8625680-8625699 | None:intergenic | 35.0% |
| GGACTTGAAAAGTAATGTAC+AGG | + | chr1_3:8625760-8625779 | None:intergenic | 35.0% | |
| !!! | TTTTCAAGTCCCAAGTCTTA+TGG | - | chr1_3:8625769-8625788 | Msa0101960:intron | 35.0% |
| TTTGCATGACCATAAGACTT+GGG | + | chr1_3:8625781-8625800 | None:intergenic | 35.0% | |
| GGTCATGCAAACAATGAAAA+TGG | - | chr1_3:8625790-8625809 | Msa0101960:intron | 35.0% | |
| !! | TTCTTTCCACTTTTCACATC+CGG | + | chr1_3:8625823-8625842 | None:intergenic | 35.0% |
| GCAAAGAACATAAAAAGTCG+CGG | + | chr1_3:8625865-8625884 | None:intergenic | 35.0% | |
| TGTCCTCAAAAATCACATAG+TGG | + | chr1_3:8626066-8626085 | None:intergenic | 35.0% | |
| !! | CTATGTGATTTTTGAGGACA+TGG | - | chr1_3:8626066-8626085 | Msa0101960:intron | 35.0% |
| AGAACATACCCTGATTAAGC+AGG | + | chr1_3:8622101-8622120 | None:intergenic | 40.0% | |
| TGTTGCAGGGAAAATTCTTC+AGG | + | chr1_3:8622488-8622507 | None:intergenic | 40.0% | |
| ! | TGAAGAATTTTCCCTGCAAC+AGG | - | chr1_3:8622487-8622506 | Msa0101960:CDS | 40.0% |
| TTGTCTTCAACTTCCTCCAT+TGG | + | chr1_3:8622931-8622950 | None:intergenic | 40.0% | |
| TCAACATTTCTTGAGGAGGT+TGG | + | chr1_3:8622955-8622974 | None:intergenic | 40.0% | |
| TGGTTCAACATTTCTTGAGG+AGG | + | chr1_3:8622959-8622978 | None:intergenic | 40.0% | |
| ATGGAAGAGTCATTATCGGT+TGG | + | chr1_3:8623030-8623049 | None:intergenic | 40.0% | |
| GAAACAGAAGAAAACCACCT+AGG | - | chr1_3:8623234-8623253 | Msa0101960:CDS | 40.0% | |
| CAACTCTTCTGTTACAGAAG+AGG | + | chr1_3:8623370-8623389 | None:intergenic | 40.0% | |
| ! | GCATCAATAACTTCGGTTTG+AGG | + | chr1_3:8623524-8623543 | None:intergenic | 40.0% |
| TACATGAACTTCAGCATCTG+AGG | + | chr1_3:8623570-8623589 | None:intergenic | 40.0% | |
| TGTAACAGAACAAAGTCACC+AGG | - | chr1_3:8623586-8623605 | Msa0101960:CDS | 40.0% | |
| TGTTCAGAATCTGTAACCAC+AGG | + | chr1_3:8623614-8623633 | None:intergenic | 40.0% | |
| AAGATTCCTGATGTTGCTGA+TGG | - | chr1_3:8623785-8623804 | Msa0101960:CDS | 40.0% | |
| !! | GAAGCTGTTTCTAAGTTTGG+AGG | - | chr1_3:8623893-8623912 | Msa0101960:CDS | 40.0% |
| AGTTTGGAGGAATTGTCGAT+TGG | - | chr1_3:8623906-8623925 | Msa0101960:CDS | 40.0% | |
| AACTAAAACTGAGCCTAGAG+AGG | - | chr1_3:8624216-8624235 | Msa0101960:intron | 40.0% | |
| ACTAAAACTGAGCCTAGAGA+GGG | - | chr1_3:8624217-8624236 | Msa0101960:intron | 40.0% | |
| AAAGCTCAGAGTGGAAGAAA+TGG | - | chr1_3:8624283-8624302 | Msa0101960:CDS | 40.0% | |
| CACCGATGTTAACTCTGTAA+TGG | + | chr1_3:8624384-8624403 | None:intergenic | 40.0% | |
| ATCGAAGCAAGTGGAAAAGA+CGG | - | chr1_3:8624496-8624515 | Msa0101960:CDS | 40.0% | |
| GATTGCCACAAAAGAGTCTT+TGG | - | chr1_3:8624541-8624560 | Msa0101960:CDS | 40.0% | |
| ATCTGCACATTCTGCACATA+TGG | - | chr1_3:8624565-8624584 | Msa0101960:CDS | 40.0% | |
| GAAGCAGAAGAACACAGAAT+AGG | - | chr1_3:8624587-8624606 | Msa0101960:CDS | 40.0% | |
| ACACAGAATAGGAACAGTCA+TGG | - | chr1_3:8624598-8624617 | Msa0101960:CDS | 40.0% | |
| AAGATTCTCTCAATTGGGAG+AGG | - | chr1_3:8624630-8624649 | Msa0101960:CDS | 40.0% | |
| AGATTCTCTCAATTGGGAGA+GGG | - | chr1_3:8624631-8624650 | Msa0101960:CDS | 40.0% | |
| CATAGAGAAAGCTACTTCTG+AGG | - | chr1_3:8624907-8624926 | Msa0101960:CDS | 40.0% | |
| ! | TGAAGTGCTTAGGAGAGTAA+AGG | - | chr1_3:8625195-8625214 | Msa0101960:CDS | 40.0% |
| AGCCAATTCGAGAATTGCAA+CGG | - | chr1_3:8625456-8625475 | Msa0101960:intron | 40.0% | |
| GGAGACTGAATTGAAAACCA+TGG | - | chr1_3:8625504-8625523 | Msa0101960:intron | 40.0% | |
| TGGATAAATCTGAGAAGGCA+AGG | - | chr1_3:8625587-8625606 | Msa0101960:intron | 40.0% | |
| GGATAAATCTGAGAAGGCAA+GGG | - | chr1_3:8625588-8625607 | Msa0101960:intron | 40.0% | |
| AAGGCAAGGGAAGGAAAATT+AGG | - | chr1_3:8625601-8625620 | Msa0101960:intron | 40.0% | |
| GTTTGCATGACCATAAGACT+TGG | + | chr1_3:8625782-8625801 | None:intergenic | 40.0% | |
| CAATGAAAATGGATCCTCAC+CGG | - | chr1_3:8625801-8625820 | Msa0101960:intron | 40.0% | |
| AAAGCACATCCAACTCATTC+AGG | - | chr1_3:8625892-8625911 | Msa0101960:intron | 40.0% | |
| AAGCACATCCAACTCATTCA+GGG | - | chr1_3:8625893-8625912 | Msa0101960:intron | 40.0% | |
| GGAATTAAGTTCATCACCCT+TGG | - | chr1_3:8626087-8626106 | Msa0101960:intron | 40.0% | |
| GACATGCAAAGAGTGGACAA+GGG | + | chr1_3:8622241-8622260 | None:intergenic | 45.0% | |
| CAACATGGACATGCAAAGAG+TGG | + | chr1_3:8622248-8622267 | None:intergenic | 45.0% | |
| TTGAGATGTCTCCTGTTGCA+GGG | + | chr1_3:8622501-8622520 | None:intergenic | 45.0% | |
| !! | TGAGTTGATGGAAGCTTCGA+TGG | + | chr1_3:8623049-8623068 | None:intergenic | 45.0% |
| AAGTTCAGAATCGGCAGCTA+TGG | + | chr1_3:8623262-8623281 | None:intergenic | 45.0% | |
| GAGTTGCAGATTGACCCTAA+AGG | - | chr1_3:8623384-8623403 | Msa0101960:CDS | 45.0% | |
| ! | AACTTCAGCATCTGAGGTTG+AGG | + | chr1_3:8623564-8623583 | None:intergenic | 45.0% |
| AATCTGTAACCACAGGTTCC+TGG | + | chr1_3:8623607-8623626 | None:intergenic | 45.0% | |
| GTGAACATGCATAAGGATGG+TGG | - | chr1_3:8623653-8623672 | Msa0101960:CDS | 45.0% | |
| GATCTAACGGCTTCATCTTC+TGG | - | chr1_3:8623707-8623726 | Msa0101960:CDS | 45.0% | |
| ACACTTCCATCAGCAACATC+AGG | + | chr1_3:8623794-8623813 | None:intergenic | 45.0% | |
| AGCTCCATTCGAATCTGTCA+AGG | - | chr1_3:8623871-8623890 | Msa0101960:CDS | 45.0% | |
| GCTTCCTTGACAGATTCGAA+TGG | + | chr1_3:8623878-8623897 | None:intergenic | 45.0% | |
| ! | TGGAGGAATTGTCGATTGGA+AGG | - | chr1_3:8623910-8623929 | Msa0101960:CDS | 45.0% |
| TCCGGAGTACAGGAAAAGAT+CGG | - | chr1_3:8624127-8624146 | Msa0101960:intron | 45.0% | |
| ! | TCCGATCTTTTCCTGTACTC+CGG | + | chr1_3:8624131-8624150 | None:intergenic | 45.0% |
| ! | TGTCAAGCTCCTGAAGTACT+TGG | + | chr1_3:8624175-8624194 | None:intergenic | 45.0% |
| !! | AAACCGAAGAGCATCAAGCA+AGG | - | chr1_3:8624243-8624262 | Msa0101960:intron | 45.0% |
| TTGCCTTGCTTGATGCTCTT+CGG | + | chr1_3:8624249-8624268 | None:intergenic | 45.0% | |
| AGAACTTGCAAAGCTCAGAG+TGG | - | chr1_3:8624274-8624293 | Msa0101960:CDS | 45.0% | |
| AGAGTGGAAGAAATGGAGCA+AGG | - | chr1_3:8624290-8624309 | Msa0101960:CDS | 45.0% | |
| TATTGCCGAAGATTCCAGTG+TGG | - | chr1_3:8624313-8624332 | Msa0101960:CDS | 45.0% | |
| TCAAACCAAGAAGGAGACGA+TGG | - | chr1_3:8624794-8624813 | Msa0101960:intron | 45.0% | |
| AATGCAAGCAGCAGTTGAGT+CGG | - | chr1_3:8624853-8624872 | Msa0101960:CDS | 45.0% | |
| AATCATCGCTTGCCTCGATT+AGG | - | chr1_3:8624984-8625003 | Msa0101960:CDS | 45.0% | |
| GATTAGGCAAAGAGAGGGAA+TGG | - | chr1_3:8625000-8625019 | Msa0101960:CDS | 45.0% | |
| GATAGACGCAACTGTAATCG+AGG | + | chr1_3:8625026-8625045 | None:intergenic | 45.0% | |
| GACGCTTCTTGAAGCTTCTT+TGG | + | chr1_3:8625133-8625152 | None:intergenic | 45.0% | |
| ! | GAGAAGCTTGTGAAGTGCTT+AGG | - | chr1_3:8625185-8625204 | Msa0101960:CDS | 45.0% |
| AGTGCTTAGGAGAGTAAAGG+AGG | - | chr1_3:8625198-8625217 | Msa0101960:CDS | 45.0% | |
| AAGCTGCAAGAGCTTCTGAA+AGG | - | chr1_3:8625290-8625309 | Msa0101960:five_prime_UTR | 45.0% | |
| ! | TGCAAGAGCTTCTGAAAGGT+TGG | - | chr1_3:8625294-8625313 | Msa0101960:five_prime_UTR | 45.0% |
| TGCCGTTGCAATTCTCGAAT+TGG | + | chr1_3:8625461-8625480 | None:intergenic | 45.0% | |
| AAATCTGAGAAGGCAAGGGA+AGG | - | chr1_3:8625592-8625611 | Msa0101960:intron | 45.0% | |
| AGAAAGTGGAGAGCAGAACA+TGG | - | chr1_3:8625640-8625659 | Msa0101960:five_prime_UTR | 45.0% | |
| AGTGACTACCCTGAATGAGT+TGG | + | chr1_3:8625904-8625923 | None:intergenic | 45.0% | |
| TGCAAAGAGTGGACAAGGGA+AGG | + | chr1_3:8622237-8622256 | None:intergenic | 50.0% | |
| GGACATGCAAAGAGTGGACA+AGG | + | chr1_3:8622242-8622261 | None:intergenic | 50.0% | |
| GTTGAGATGTCTCCTGTTGC+AGG | + | chr1_3:8622502-8622521 | None:intergenic | 50.0% | |
| ! | GGGGCATCTGCTAGTGAATT+TGG | + | chr1_3:8622979-8622998 | None:intergenic | 50.0% |
| ACAAAGTCACCAGGAACCTG+TGG | - | chr1_3:8623595-8623614 | Msa0101960:CDS | 50.0% | |
| TCATCGAATGATAGCCGTCG+AGG | - | chr1_3:8623934-8623953 | Msa0101960:CDS | 50.0% | |
| GGAGTACAGGAAAAGATCGG+AGG | - | chr1_3:8624130-8624149 | Msa0101960:intron | 50.0% | |
| AACTCGAGGTTGCCAAAGCA+AGG | - | chr1_3:8624348-8624367 | Msa0101960:CDS | 50.0% | |
| GGCACTCGTATACCTTGCTT+TGG | + | chr1_3:8624363-8624382 | None:intergenic | 50.0% | |
| CGAGTTAGATTCGTTGCGTG+TGG | - | chr1_3:8624409-8624428 | Msa0101960:CDS | 50.0% | |
| CGATGCAGCAACAGCATCTT+CGG | + | chr1_3:8624480-8624499 | None:intergenic | 50.0% | |
| TGTTGCTGCATCGAAGCAAG+TGG | - | chr1_3:8624487-8624506 | Msa0101960:CDS | 50.0% | |
| AGACTCCATCGTCTCCTTCT+TGG | + | chr1_3:8624802-8624821 | None:intergenic | 50.0% | |
| AGGAGACGATGGAGTCTCAA+AGG | - | chr1_3:8624805-8624824 | Msa0101960:intron | 50.0% | |
| TGGAGTCTCAAAGGAGCAAC+TGG | - | chr1_3:8624814-8624833 | Msa0101960:CDS | 50.0% | |
| AGCAGTTGAGTCGGCCAAAA+AGG | - | chr1_3:8624862-8624881 | Msa0101960:CDS | 50.0% | |
| TGCCTCGATTAGGCAAAGAG+AGG | - | chr1_3:8624994-8625013 | Msa0101960:CDS | 50.0% | |
| GCCTCGATTAGGCAAAGAGA+GGG | - | chr1_3:8624995-8625014 | Msa0101960:CDS | 50.0% | |
| TCCCTCTCTTTGCCTAATCG+AGG | + | chr1_3:8624999-8625018 | None:intergenic | 50.0% | |
| GAAGCTTCTTTGGCAGCTCA+AGG | + | chr1_3:8625123-8625142 | None:intergenic | 50.0% | |
| !! | GCTTCAAGAAGCGTCTGAAG+AGG | - | chr1_3:8625138-8625157 | Msa0101960:CDS | 50.0% |
| AGCGTCTGAAGAGGCGAATA+TGG | - | chr1_3:8625147-8625166 | Msa0101960:CDS | 50.0% | |
| AGCTTCTCGAGCAAGCAAGT+TGG | + | chr1_3:8625173-8625192 | None:intergenic | 50.0% | |
| CATTGTACTAGCACCAGCCT+TGG | + | chr1_3:8625236-8625255 | None:intergenic | 50.0% | |
| AGCATTGCAAGAGAGCGAGT+CGG | - | chr1_3:8625333-8625352 | Msa0101960:intron | 50.0% | |
| GGAGAGCAGAACATGGACAA+CGG | - | chr1_3:8625647-8625666 | Msa0101960:five_prime_UTR | 50.0% | |
| CATGGACAACGGAGAAAAGC+CGG | - | chr1_3:8625658-8625677 | Msa0101960:five_prime_UTR | 50.0% | |
| CGGAGAAAAGCCGGTGAAAT+AGG | - | chr1_3:8625667-8625686 | Msa0101960:five_prime_UTR | 50.0% | |
| TCCTCACCGGATGTGAAAAG+TGG | - | chr1_3:8625814-8625833 | Msa0101960:intron | 50.0% | |
| !! | TCCACTTTTCACATCCGGTG+AGG | + | chr1_3:8625818-8625837 | None:intergenic | 50.0% |
| AATCGGCAGCTATGGCTCCT+AGG | + | chr1_3:8623254-8623273 | None:intergenic | 55.0% | |
| ACGAGGAGATTCCGGAGTAC+AGG | - | chr1_3:8624117-8624136 | Msa0101960:CDS | 55.0% | |
| ! | CTTCGGTTTGTGCCCTCTCT+AGG | + | chr1_3:8624232-8624251 | None:intergenic | 55.0% |
| GGCTGCCACACTGGAATCTT+CGG | + | chr1_3:8624321-8624340 | None:intergenic | 55.0% | |
| AGATTCCAGTGTGGCAGCCA+AGG | - | chr1_3:8624322-8624341 | Msa0101960:CDS | 55.0% | |
| GGAGGAAGCAGAACAAGCCA+AGG | - | chr1_3:8625216-8625235 | Msa0101960:CDS | 55.0% | |
| GAAGCAGAACAAGCCAAGGC+TGG | - | chr1_3:8625220-8625239 | Msa0101960:CDS | 55.0% | |
| CGGCAGCTATGGCTCCTAGG+TGG | + | chr1_3:8623251-8623270 | None:intergenic | 65.0% | |
| TTGCGCCTTGGCTGCCACAC+TGG | + | chr1_3:8624330-8624349 | None:intergenic | 65.0% | |
| ! | GGCAACCTCGAGTTGCGCCT+TGG | + | chr1_3:8624342-8624361 | None:intergenic | 65.0% |
| GGCAGCCAAGGCGCAACTCG+AGG | - | chr1_3:8624334-8624353 | Msa0101960:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 8622047 | 8626172 | 8622047 | ID=Msa0101960;Name=Msa0101960 |
| chr1_3 | mRNA | 8622047 | 8626172 | 8622047 | ID=Msa0101960-mRNA-1;Parent=Msa0101960;Name=Msa0101960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=198|0.75|0.8|1|0.5|0.4|5|254|924 |
| chr1_3 | exon | 8622047 | 8624139 | 8622047 | ID=Msa0101960-mRNA-1:exon:3465;Parent=Msa0101960-mRNA-1 |
| chr1_3 | exon | 8624264 | 8624724 | 8624264 | ID=Msa0101960-mRNA-1:exon:3464;Parent=Msa0101960-mRNA-1 |
| chr1_3 | exon | 8624814 | 8625321 | 8624814 | ID=Msa0101960-mRNA-1:exon:3463;Parent=Msa0101960-mRNA-1 |
| chr1_3 | exon | 8625628 | 8625727 | 8625628 | ID=Msa0101960-mRNA-1:exon:3462;Parent=Msa0101960-mRNA-1 |
| chr1_3 | exon | 8626108 | 8626172 | 8626108 | ID=Msa0101960-mRNA-1:exon:3461;Parent=Msa0101960-mRNA-1 |
| chr1_3 | five_prime_UTR | 8626108 | 8626172 | 8626108 | ID=Msa0101960-mRNA-1:five_prime_utr;Parent=Msa0101960-mRNA-1 |
| chr1_3 | five_prime_UTR | 8625628 | 8625727 | 8625628 | ID=Msa0101960-mRNA-1:five_prime_utr;Parent=Msa0101960-mRNA-1 |
| chr1_3 | five_prime_UTR | 8625289 | 8625321 | 8625289 | ID=Msa0101960-mRNA-1:five_prime_utr;Parent=Msa0101960-mRNA-1 |
| chr1_3 | CDS | 8624814 | 8625288 | 8624814 | ID=Msa0101960-mRNA-1:cds;Parent=Msa0101960-mRNA-1 |
| chr1_3 | CDS | 8624264 | 8624724 | 8624264 | ID=Msa0101960-mRNA-1:cds;Parent=Msa0101960-mRNA-1 |
| chr1_3 | CDS | 8622301 | 8624139 | 8622301 | ID=Msa0101960-mRNA-1:cds;Parent=Msa0101960-mRNA-1 |
| chr1_3 | three_prime_UTR | 8622047 | 8622300 | 8622047 | ID=Msa0101960-mRNA-1:three_prime_utr;Parent=Msa0101960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
