AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038990 MtrunA17_Chr7g0273131 69.745 314 48 8 1 270 1 311 2.36e-134 393
Msa1038990 MtrunA17_Chr7g0273161 78.646 192 41 0 345 536 61 252 7.36e-111 330
Msa1038990 MtrunA17_Chr7g0273141 83.770 191 22 1 306 496 1 182 2.45e-110 326
Msa1038990 MtrunA17_Chr7g0273151 44.404 277 107 7 58 290 69 342 4.94e-59 199
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038990 AT5G27380.1 48.000 500 186 7 79 535 70 538 2.07e-149 439

Find 154 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCATGTCATTTCAGAATT+TGG 0.069198 7_1:-76011341 Msa1038990:CDS
CTGGGTGCTTGGTTTGGTTT+GGG 0.185395 7_1:-76017068 Msa1038990:CDS
CTCTCAATGGTCTTCTTGTT+GGG 0.199258 7_1:-76016783 Msa1038990:CDS
GGATATTCAGTACTTATTTA+AGG 0.203625 7_1:-76011319 Msa1038990:intron
GCTTGTTTCCAATGAGTTTC+AGG 0.219728 7_1:+76014473 None:intergenic
ATATTTATGGTGATGATCTT+AGG 0.227957 7_1:-76011484 Msa1038990:CDS
AAGACCTCCTCCTTCTCTTT+GGG 0.228835 7_1:+76011585 None:intergenic
AAGCTTTGGAAACTTTAAAA+TGG 0.234189 7_1:+76010559 None:intergenic
TCTAAAATAAAACTTCAAAA+TGG 0.235550 7_1:+76010648 None:intergenic
AAAATAATCAATATCATTAA+TGG 0.237813 7_1:-76010288 Msa1038990:three_prime_UTR
AGGTCAATGGTTGCTGGATC+TGG 0.269944 7_1:-76017087 Msa1038990:exon
CTTTGCAGGGTTGTGGAGTT+TGG 0.271620 7_1:-76011665 Msa1038990:CDS
ACAAAATAAAAGAGAAATAG+TGG 0.274884 7_1:+76010337 None:intergenic
ATCATGTCATTTCAGAATTT+GGG 0.274907 7_1:-76011340 Msa1038990:CDS
AAAGACCTCCTCCTTCTCTT+TGG 0.279994 7_1:+76011584 None:intergenic
TGTGATTATCGTTGTGGTTC+AGG 0.280652 7_1:-76013123 Msa1038990:CDS
TGACTGGATTTGCAGGAATA+AGG 0.290675 7_1:-76011227 Msa1038990:intron
CAACATTCCGTTTAAAGCTT+TGG 0.303878 7_1:+76010545 None:intergenic
CCCTAACATATCTTATCATT+TGG 0.308124 7_1:-76012296 Msa1038990:CDS
TCTGGGTGCTTGGTTTGGTT+TGG 0.316041 7_1:-76017069 Msa1038990:CDS
ACTCTCAATGGTCTTCTTGT+TGG 0.316848 7_1:-76016784 Msa1038990:CDS
AAACTGCGTAAATGCTTTGC+AGG 0.320267 7_1:-76011679 Msa1038990:CDS
CTGGATCTGGGTGCTTGGTT+TGG 0.324131 7_1:-76017074 Msa1038990:CDS
CTTGTCTTTGCCACTCTCAA+TGG 0.336236 7_1:-76016796 Msa1038990:CDS
TTGGAAACAAGCTTGTGATT+TGG 0.355833 7_1:-76014462 Msa1038990:CDS
AGGAACATACTTTCTCACTA+TGG 0.355947 7_1:-76013338 Msa1038990:CDS
ACAGTACTACTGATCTTTGT+TGG 0.373350 7_1:+76016989 None:intergenic
GTTACACGCCTCCTTTATAT+AGG 0.374517 7_1:+76010196 None:intergenic
ACCAAATGATAAGATATGTT+AGG 0.375510 7_1:+76012295 None:intergenic
TCAAACTTTATTTGCACAAA+AGG 0.378764 7_1:+76010512 None:intergenic
AATTAGCCATTCCTATATAA+AGG 0.386790 7_1:-76010207 Msa1038990:three_prime_UTR
AAGCGCCTCTTGCTCTCTCT+TGG 0.392107 7_1:+76010468 None:intergenic
GGTTGCTGGATCTGGGTGCT+TGG 0.396753 7_1:-76017079 Msa1038990:CDS
GGGGAGGTAGTAAGGAAAAT+GGG 0.399711 7_1:+76014501 None:intergenic
AAAGTTTCCAAAGCTTTAAA+CGG 0.400661 7_1:-76010552 Msa1038990:three_prime_UTR
AAGGATGGTGCAACCAGTTA+AGG 0.403402 7_1:-76010426 Msa1038990:three_prime_UTR
TCAACAAGTTCATTGAATAA+AGG 0.412215 7_1:+76014437 None:intergenic
CTTACTTGGAGAGGGATTGT+TGG 0.413267 7_1:+76014387 None:intergenic
CCCCTCTTCCTGAAACTCAT+TGG 0.421375 7_1:-76014481 Msa1038990:CDS
AAAATTGACGCCGTGTTAGC+TGG 0.424793 7_1:+76011389 None:intergenic
CAGTACTACTGATCTTTGTT+GGG 0.429310 7_1:+76016990 None:intergenic
CATTTGTACATCTATGTTTG+TGG 0.438319 7_1:+76016909 None:intergenic
CTAAAATAAAACTTCAAAAT+GGG 0.439208 7_1:+76010649 None:intergenic
AGGAGGCGTGTAACTCTTGT+AGG 0.440158 7_1:-76010187 Msa1038990:three_prime_UTR
AACATATCTTATCATTTGGT+TGG 0.445918 7_1:-76012292 Msa1038990:CDS
AATAAATTGATGCTGATCAA+TGG 0.448258 7_1:-76010401 Msa1038990:three_prime_UTR
TATTTATGGTGATGATCTTA+GGG 0.453378 7_1:-76011483 Msa1038990:CDS
AGTATTGACAGGAACCCTTT+CGG 0.455508 7_1:+76013295 None:intergenic
ACCAATAAAAGATTGATGAA+TGG 0.457952 7_1:-76010948 Msa1038990:three_prime_UTR
AAGATACCTTTCAAGAACAT+TGG 0.458442 7_1:+76012237 None:intergenic
AGATACCTTTCAAGAACATT+GGG 0.458663 7_1:+76012238 None:intergenic
GAGAACCACAATGGCATTGA+AGG 0.460299 7_1:-76010687 Msa1038990:three_prime_UTR
TCCAATGAGTTTCAGGAAGA+GGG 0.464589 7_1:+76014480 None:intergenic
TGCAGGGTTGTGGAGTTTGG+AGG 0.467159 7_1:-76011662 Msa1038990:CDS
CACAAACATAGATGTACAAA+TGG 0.468553 7_1:-76016908 Msa1038990:CDS
GTGATTATCGTTGTGGTTCA+GGG 0.475550 7_1:-76013122 Msa1038990:CDS
AACCAACTCATTGAATTATG+AGG 0.477378 7_1:-76011085 Msa1038990:three_prime_UTR
CCAAATGATAAGATATGTTA+GGG 0.477700 7_1:+76012296 None:intergenic
TCTCACTATGGAAAATTGCT+TGG 0.479320 7_1:-76013326 Msa1038990:CDS
AACAGATTGTAAACATGTCA+TGG 0.479444 7_1:+76011007 None:intergenic
TTTACATCAGATGAACAAAC+AGG 0.480520 7_1:+76010919 None:intergenic
TATGAAATGTGTTGGCCGTT+GGG 0.480879 7_1:+76010804 None:intergenic
AGCCTCATAATTCAATGAGT+TGG 0.481923 7_1:+76011083 None:intergenic
TGATGCGTGTCACAAAGTTA+AGG 0.484116 7_1:+76012844 None:intergenic
GATTTGCAGGAATAAGGATA+AGG 0.490104 7_1:-76011221 Msa1038990:intron
AAAAGCAAAGGAAAGGGAAA+AGG 0.495002 7_1:-76010445 Msa1038990:three_prime_UTR
GTTGATCGTGTTAGCTTGGA+TGG 0.498821 7_1:-76014419 Msa1038990:CDS
GTTATTGTGAATAGTGAAAG+TGG 0.498823 7_1:-76011199 Msa1038990:CDS
TTCCAATGAGTTTCAGGAAG+AGG 0.500854 7_1:+76014479 None:intergenic
CGGAGGCATTAGCTAAAGCT+TGG 0.502348 7_1:-76013256 Msa1038990:CDS
GCAGCATCTTCTTGAGAACC+TGG 0.506987 7_1:+76011437 None:intergenic
TACACCAGTTGACTATCCTT+CGG 0.507409 7_1:-76012603 Msa1038990:CDS
TCTCAATGGTCTTCTTGTTG+GGG 0.512902 7_1:-76016782 Msa1038990:CDS
AAGTGAAGGTCAATGGTTGC+TGG 0.512902 7_1:-76017093 Msa1038990:exon
GGTCAATGGTTGCTGGATCT+GGG 0.513277 7_1:-76017086 Msa1038990:exon
GTAAATGCTTTGCAGGGTTG+TGG 0.516501 7_1:-76011672 Msa1038990:CDS
CCACCTTCATCAGATAATGA+TGG 0.517376 7_1:+76011157 None:intergenic
AAACCATCATTATCTGATGA+AGG 0.519453 7_1:-76011160 Msa1038990:CDS
TAATAGTAACCACTAAGAAA+AGG 0.520804 7_1:+76013041 None:intergenic
AGACCTCCTCCTTCTCTTTG+GGG 0.522696 7_1:+76011586 None:intergenic
TGTAAACATGTCATGGGAGA+AGG 0.526187 7_1:+76011014 None:intergenic
GGTTTCATCACAAATAACTC+TGG 0.526540 7_1:+76011607 None:intergenic
GATTCCGAAGGATAGTCAAC+TGG 0.528469 7_1:+76012599 None:intergenic
TTGTTATGACTGAACTTCAC+AGG 0.529474 7_1:-76013806 Msa1038990:intron
ATATGAAATGTGTTGGCCGT+TGG 0.530805 7_1:+76010803 None:intergenic
ACTTGTTGATCGTGTTAGCT+TGG 0.531116 7_1:-76014423 Msa1038990:CDS
GTAGATGAGACGAAAGATGA+AGG 0.531307 7_1:+76017015 None:intergenic
ATATATAGGAATGGAGAGCT+AGG 0.532315 7_1:-76012351 Msa1038990:intron
ACGCCTCCTTTATATAGGAA+TGG 0.534082 7_1:+76010201 None:intergenic
TAATCAATATCATTAATGGC+TGG 0.537396 7_1:-76010284 Msa1038990:three_prime_UTR
GAAATAGTGGGAAATCTGAA+TGG 0.545133 7_1:+76010350 None:intergenic
TACACAGAAAGTGTTCCATC+TGG 0.547412 7_1:+76012766 None:intergenic
ATCATTATCTGATGAAGGTG+GGG 0.547809 7_1:-76011155 Msa1038990:CDS
TGTTGGGGATAAATCTGTTG+AGG 0.548302 7_1:-76016767 Msa1038990:intron
GAAGGAGAAATTCTGCCAGA+TGG 0.548596 7_1:-76012781 Msa1038990:CDS
CGCATCATATTACAACCATA+CGG 0.548922 7_1:-76012828 Msa1038990:CDS
GGCGCTTAAAAGCAAAGGAA+AGG 0.549201 7_1:-76010452 Msa1038990:three_prime_UTR
CGACTGTCGGCAGTATTGAC+AGG 0.549842 7_1:+76013284 None:intergenic
CATCATTATCTGATGAAGGT+GGG 0.553324 7_1:-76011156 Msa1038990:CDS
AACCATACGGAAAACATTGG+CGG 0.554891 7_1:-76012815 Msa1038990:CDS
GCGCTTAAAAGCAAAGGAAA+GGG 0.556035 7_1:-76010451 Msa1038990:three_prime_UTR
CAATGAGTTTCAGGAAGAGG+GGG 0.557432 7_1:+76014482 None:intergenic
CCATCATTATCTGATGAAGG+TGG 0.563545 7_1:-76011157 Msa1038990:CDS
CTATGTTTGTGGTAGAACTC+AGG 0.563561 7_1:+76016920 None:intergenic
TGATGATAATCATTAAAGCT+AGG 0.564185 7_1:+76016859 None:intergenic
GGCATTAGCTAAAGCTTGGA+AGG 0.566933 7_1:-76013252 Msa1038990:CDS
CAGGTTCTTTGAAAACAAAG+AGG 0.567404 7_1:-76011710 Msa1038990:CDS
TGCTTGGACTAGATTCCGAA+AGG 0.569885 7_1:-76013310 Msa1038990:CDS
CTATCTATTACTCCAAAACC+AGG 0.571215 7_1:+76011127 None:intergenic
GCTTGGACTAGATTCCGAAA+GGG 0.577174 7_1:-76013309 Msa1038990:CDS
AAACATAGATGTACAAATGG+TGG 0.579552 7_1:-76016905 Msa1038990:CDS
GGCTGAAAAGTGAAGGTCAA+TGG 0.581111 7_1:-76017100 Msa1038990:exon
GCAATCGTTTACTTCCGAGC+TGG 0.583214 7_1:-76012629 Msa1038990:CDS
CCAATGAGTTTCAGGAAGAG+GGG 0.583796 7_1:+76014481 None:intergenic
GCCCTCCTTCAATGCCATTG+TGG 0.585328 7_1:+76010682 None:intergenic
CTTAAAAGATTACAGAAACC+AGG 0.586179 7_1:-76011455 Msa1038990:CDS
ACAGATTGTAAACATGTCAT+GGG 0.587330 7_1:+76011008 None:intergenic
ACCAACACCAGAAAATGAAG+TGG 0.589956 7_1:+76013830 None:intergenic
AACCACAATGGCATTGAAGG+AGG 0.590492 7_1:-76010684 Msa1038990:three_prime_UTR
CAAGAGGCGCTTAAAAGCAA+AGG 0.590801 7_1:-76010457 Msa1038990:three_prime_UTR
TTGGCGGAAATTAATCAAGA+AGG 0.591344 7_1:-76012799 Msa1038990:CDS
CAAGGCCCAATGTTCTTGAA+AGG 0.593143 7_1:-76012243 Msa1038990:intron
GGAAGGAGTATAATAACCCT+AGG 0.596260 7_1:-76013235 Msa1038990:intron
TACAACCATACGGAAAACAT+TGG 0.596330 7_1:-76012818 Msa1038990:CDS
CAACTGGTGTATAGCCAGCT+CGG 0.596989 7_1:+76012615 None:intergenic
GTGATGAAACCCCAAAGAGA+AGG 0.597189 7_1:-76011595 Msa1038990:CDS
TTAAAGCTAGGAAGCGTCAT+GGG 0.601055 7_1:+76016871 None:intergenic
TATGACCAAGAGAGAGCAAG+AGG 0.601302 7_1:-76010473 Msa1038990:three_prime_UTR
CAGGGCTGTGATTATCGTTG+TGG 0.601846 7_1:-76013129 Msa1038990:CDS
GAGGATATTTCCAGCTAACA+CGG 0.603964 7_1:-76011399 Msa1038990:CDS
CAAAATAAAAGAGAAATAGT+GGG 0.609552 7_1:+76010338 None:intergenic
GAATAGTGAAAGTGGCTACA+TGG 0.610565 7_1:-76011191 Msa1038990:CDS
TGGGAACAACAACTTTCTGA+TGG 0.611451 7_1:+76010740 None:intergenic
TGAGTTGGTTTCATCATGTG+AGG 0.613305 7_1:+76011098 None:intergenic
ATTAAAGCTAGGAAGCGTCA+TGG 0.614657 7_1:+76016870 None:intergenic
ACCACAATGGCATTGAAGGA+GGG 0.619732 7_1:-76010683 Msa1038990:three_prime_UTR
GAATTGCAGACACAAAATGC+TGG 0.619927 7_1:+76013078 None:intergenic
GAGTCACTCACTGATTCCGA+AGG 0.621213 7_1:+76012587 None:intergenic
AAACCCCAAAGAGAAGGAGG+AGG 0.622591 7_1:-76011589 Msa1038990:intron
TACTGCCGACAGTCGGTATG+CGG 0.623609 7_1:-76013276 Msa1038990:CDS
AGATTCAACAGGAACTGGCA+AGG 0.626477 7_1:-76012261 Msa1038990:CDS
AACTGCGTAAATGCTTTGCA+GGG 0.626533 7_1:-76011678 Msa1038990:CDS
ATGAAACCCCAAAGAGAAGG+AGG 0.632942 7_1:-76011592 Msa1038990:CDS
TGCCGACAGTCGGTATGCGG+AGG 0.634383 7_1:-76013273 Msa1038990:CDS
CTGCTTACATACTTATGCAG+AGG 0.636519 7_1:-76011418 Msa1038990:CDS
AAGCTTTAAACGGAATGTTG+TGG 0.644917 7_1:-76010542 Msa1038990:three_prime_UTR
AACAAGAAGACCATTGAGAG+TGG 0.648014 7_1:+76016786 None:intergenic
CTGTCAATACTGCCGACAGT+CGG 0.648699 7_1:-76013283 Msa1038990:CDS
CTTACTGATGAGAACCACAA+TGG 0.658841 7_1:-76010696 Msa1038990:three_prime_UTR
TGCCTCCGCATACCGACTGT+CGG 0.662215 7_1:+76013271 None:intergenic
GCAAAGGAAAGGGAAAAGGA+TGG 0.664238 7_1:-76010441 Msa1038990:three_prime_UTR
TAGCCATTCCTATATAAAGG+AGG 0.669276 7_1:-76010204 Msa1038990:three_prime_UTR
AAGCTAGGAAGCGTCATGGG+AGG 0.683253 7_1:+76016874 None:intergenic
TTGTCATGGCTGAAAAGTGA+AGG 0.701093 7_1:-76017107 Msa1038990:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTATTTAAATTAGTTA+GGG + chr7_1:76011446-76011465 None:intergenic 10.0%
!!! GTCATTTTTTATATTTTTTT+TGG + chr7_1:76011351-76011370 None:intergenic 10.0%
!!! TTTTGTATTTAAATTAGTTA+GGG - chr7_1:76011446-76011465 Msa1038990:CDS 10.0%
!! TAAAATTTACAAACAAATTT+AGG - chr7_1:76012540-76012559 Msa1038990:intron 10.0%
!! TTGATTTAACTAATTAATAA+TGG + chr7_1:76015149-76015168 None:intergenic 10.0%
!! AAAATAATCAATATCATTAA+TGG - chr7_1:76016983-76017002 Msa1038990:CDS 10.0%
!!! AATTTGAAAACTTTGTTTTT+CGG + chr7_1:76010868-76010887 None:intergenic 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG + chr7_1:76011447-76011466 None:intergenic 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG + chr7_1:76011445-76011464 None:intergenic 15.0%
!!! GTTTTGTATTTAAATTAGTT+AGG - chr7_1:76011445-76011464 Msa1038990:CDS 15.0%
!! TTTGTATTTAAATTAGTTAG+GGG - chr7_1:76011447-76011466 Msa1038990:CDS 15.0%
!! TATGTATTAATTATACTACA+AGG - chr7_1:76013060-76013079 Msa1038990:CDS 15.0%
!! AAAATTAGCAACTAATATAA+TGG + chr7_1:76013911-76013930 None:intergenic 15.0%
!!! TTATGCTTTATATTTTTGAA+TGG - chr7_1:76014112-76014131 Msa1038990:intron 15.0%
!!! ATAAATGTAATTACTTTTTC+AGG - chr7_1:76015759-76015778 Msa1038990:intron 15.0%
!! CTAAAATAAAACTTCAAAAT+GGG + chr7_1:76016625-76016644 None:intergenic 15.0%
!!! TCTAAAATAAAACTTCAAAA+TGG + chr7_1:76016626-76016645 None:intergenic 15.0%
!!! TAATGATATTGATTATTTTG+TGG + chr7_1:76016982-76017001 None:intergenic 15.0%
!!! AGACATATTTCTATTTTTAG+GGG + chr7_1:76010317-76010336 None:intergenic 20.0%
!!! GAGACATATTTCTATTTTTA+GGG + chr7_1:76010318-76010337 None:intergenic 20.0%
!!! TGAGACATATTTCTATTTTT+AGG + chr7_1:76010319-76010338 None:intergenic 20.0%
!!! ATTTGAAAACTTTGTTTTTC+GGG + chr7_1:76010867-76010886 None:intergenic 20.0%
!!! CATCTGAAATAAAAAAACAT+AGG - chr7_1:76011070-76011089 Msa1038990:three_prime_UTR 20.0%
!! GCTCTAACTAATAAATATAT+GGG + chr7_1:76011150-76011169 None:intergenic 20.0%
!!! TAATAAACACATGATCATTT+TGG + chr7_1:76011172-76011191 None:intergenic 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG + chr7_1:76011448-76011467 None:intergenic 20.0%
!!! TTTATATTTTTTTTGGCCTT+GGG + chr7_1:76011344-76011363 None:intergenic 20.0%
!!! TTTTATATTTTTTTTGGCCT+TGG + chr7_1:76011345-76011364 None:intergenic 20.0%
!! AAAATATAAAAAATGACACG+TGG - chr7_1:76011354-76011373 Msa1038990:CDS 20.0%
!! TTGTATTTAAATTAGTTAGG+GGG - chr7_1:76011448-76011467 Msa1038990:CDS 20.0%
!!! TATATTTTTATTTACTGACC+AGG - chr7_1:76011619-76011638 Msa1038990:CDS 20.0%
!! ACTATGAAAATAACTAAGTA+GGG - chr7_1:76012111-76012130 Msa1038990:intron 20.0%
!!! TTGACTTTTTTTTTTCCTTT+TGG + chr7_1:76012361-76012380 None:intergenic 20.0%
!! AAGTTAATATTTGTGTAGAA+AGG + chr7_1:76012414-76012433 None:intergenic 20.0%
!! TAAAGTTGAAATTATGAATG+AGG - chr7_1:76012472-76012491 Msa1038990:CDS 20.0%
!! AAAGTTGAAATTATGAATGA+GGG - chr7_1:76012473-76012492 Msa1038990:CDS 20.0%
!! AGAAATTAGTATTTCCTTTA+TGG + chr7_1:76013313-76013332 None:intergenic 20.0%
!!! ATATTAGTTGCTAATTTTTC+AGG - chr7_1:76013913-76013932 Msa1038990:intron 20.0%
!!! TACTATTATTTGAGTTCAAA+AGG - chr7_1:76014245-76014264 Msa1038990:intron 20.0%
!!! ACTCTTTGATTTGTATAATT+AGG - chr7_1:76014302-76014321 Msa1038990:intron 20.0%
!!! CTCTTTGATTTGTATAATTA+GGG - chr7_1:76014303-76014322 Msa1038990:intron 20.0%
!!! TCTAATACTTACTCTTTTAT+TGG - chr7_1:76015208-76015227 Msa1038990:intron 20.0%
!!! CTAATACTTACTCTTTTATT+GGG - chr7_1:76015209-76015228 Msa1038990:intron 20.0%
!! ACTTTGTTGAAAAAAATAAG+AGG - chr7_1:76015720-76015739 Msa1038990:intron 20.0%
!! CTTTGTTGAAAAAAATAAGA+GGG - chr7_1:76015721-76015740 Msa1038990:intron 20.0%
!!! TTTTCAGGAAACAATATTTA+TGG - chr7_1:76015774-76015793 Msa1038990:intron 20.0%
!! AATTATGAGGCTAAAAAAAA+AGG - chr7_1:76016199-76016218 Msa1038990:intron 20.0%
!! ATTATGAGGCTAAAAAAAAA+GGG - chr7_1:76016200-76016219 Msa1038990:intron 20.0%
!!! TGTTTATTAGACATTTTACT+TGG - chr7_1:76016443-76016462 Msa1038990:intron 20.0%
!! TCATATGAGAAAAAATACAA+AGG - chr7_1:76016485-76016504 Msa1038990:intron 20.0%
!! CATATGAGAAAAAATACAAA+GGG - chr7_1:76016486-76016505 Msa1038990:intron 20.0%
!!! ATCAATTTATTTTCCTTAAC+TGG + chr7_1:76016861-76016880 None:intergenic 20.0%
!! CAAAATAAAAGAGAAATAGT+GGG + chr7_1:76016936-76016955 None:intergenic 20.0%
!! ACAAAATAAAAGAGAAATAG+TGG + chr7_1:76016937-76016956 None:intergenic 20.0%
!!! GACATATTTCTATTTTTAGG+GGG + chr7_1:76010316-76010335 None:intergenic 25.0%
! TGATGATAATCATTAAAGCT+AGG + chr7_1:76010415-76010434 None:intergenic 25.0%
!!! ACAATGTTTTTATCCAAAAC+TGG + chr7_1:76010769-76010788 None:intergenic 25.0%
! TAAAAGAATATCCTATGGAA+AGG + chr7_1:76010844-76010863 None:intergenic 25.0%
! GATAAGTAAAGACTGAAAAA+TGG - chr7_1:76011120-76011139 Msa1038990:CDS 25.0%
!! GGCTCTAACTAATAAATATA+TGG + chr7_1:76011151-76011170 None:intergenic 25.0%
!!! TTATATTTTTTTTGGCCTTG+GGG + chr7_1:76011343-76011362 None:intergenic 25.0%
!! TTTTTCTTAGGGAATATGTT+TGG + chr7_1:76011542-76011561 None:intergenic 25.0%
!!! CATTTTTTTAGTTGTATGTG+AGG + chr7_1:76011573-76011592 None:intergenic 25.0%
! ATAAGTCAAGTAATATGAGA+CGG + chr7_1:76011800-76011819 None:intergenic 25.0%
! AGAAAAATAAAGTCAAAGCA+TGG + chr7_1:76011848-76011867 None:intergenic 25.0%
! GACTATGAAAATAACTAAGT+AGG - chr7_1:76012110-76012129 Msa1038990:intron 25.0%
! CTATGAAAATAACTAAGTAG+GGG - chr7_1:76012112-76012131 Msa1038990:intron 25.0%
! TCGCAAAAGTTATCAAAAAT+TGG - chr7_1:76012633-76012652 Msa1038990:CDS 25.0%
! TCAACAAGTTCATTGAATAA+AGG + chr7_1:76012837-76012856 None:intergenic 25.0%
! ATGAATATCTAAAAGTCTAG+AGG + chr7_1:76013005-76013024 None:intergenic 25.0%
! TCAAATAATCCAATCCATAA+AGG - chr7_1:76013296-76013315 Msa1038990:CDS 25.0%
! TTAGTATTTCCTTTATGGAT+TGG + chr7_1:76013308-76013327 None:intergenic 25.0%
! CATGACTTTAATAGGAAATA+CGG - chr7_1:76013342-76013361 Msa1038990:intron 25.0%
!! ACATATATTTAGAGTCTGTT+TGG - chr7_1:76013571-76013590 Msa1038990:intron 25.0%
! ATTCATATGAACTCTGATTA+TGG - chr7_1:76013844-76013863 Msa1038990:CDS 25.0%
! TAATAGTAACCACTAAGAAA+AGG + chr7_1:76014233-76014252 None:intergenic 25.0%
!! TTACAGTTTGCTCAATATAT+AGG - chr7_1:76014906-76014925 Msa1038990:intron 25.0%
! CCAAATGATAAGATATGTTA+GGG + chr7_1:76014978-76014997 None:intergenic 25.0%
! ACCAAATGATAAGATATGTT+AGG + chr7_1:76014979-76014998 None:intergenic 25.0%
! AACATATCTTATCATTTGGT+TGG - chr7_1:76014979-76014998 Msa1038990:intron 25.0%
!! ATATTTATGGTGATGATCTT+AGG - chr7_1:76015787-76015806 Msa1038990:intron 25.0%
!! TATTTATGGTGATGATCTTA+GGG - chr7_1:76015788-76015807 Msa1038990:intron 25.0%
!! TGGTTTCTGTAATCTTTTAA+GGG + chr7_1:76015817-76015836 None:intergenic 25.0%
!! ATCATGTCATTTCAGAATTT+GGG - chr7_1:76015931-76015950 Msa1038990:intron 25.0%
! GGATATTCAGTACTTATTTA+AGG - chr7_1:76015952-76015971 Msa1038990:intron 25.0%
! TTATGAGGCTAAAAAAAAAG+GGG - chr7_1:76016201-76016220 Msa1038990:intron 25.0%
!! TTTTATTGGTAGAATCAAAC+AGG + chr7_1:76016313-76016332 None:intergenic 25.0%
! ACCAATAAAAGATTGATGAA+TGG - chr7_1:76016323-76016342 Msa1038990:intron 25.0%
!! ACCATTCATCAATCTTTTAT+TGG + chr7_1:76016327-76016346 None:intergenic 25.0%
!!! ACGATTAGCTTGTTAAAAAA+TGG - chr7_1:76016410-76016429 Msa1038990:intron 25.0%
!!! TTAGCTTGTTAAAAAATGGA+TGG - chr7_1:76016414-76016433 Msa1038990:intron 25.0%
!! TTTTCTCATATGAAATGTGT+TGG + chr7_1:76016478-76016497 None:intergenic 25.0%
!!! TTTTTAGCAATCTCAAAAGT+GGG + chr7_1:76016553-76016572 None:intergenic 25.0%
!!! TTTTTTAGCAATCTCAAAAG+TGG + chr7_1:76016554-76016573 None:intergenic 25.0%
!!! AAGCTTTGGAAACTTTAAAA+TGG + chr7_1:76016715-76016734 None:intergenic 25.0%
!!! AAAGTTTCCAAAGCTTTAAA+CGG - chr7_1:76016719-76016738 Msa1038990:intron 25.0%
!! TCAAACTTTATTTGCACAAA+AGG + chr7_1:76016762-76016781 None:intergenic 25.0%
! AATAAATTGATGCTGATCAA+TGG - chr7_1:76016870-76016889 Msa1038990:CDS 25.0%
! TAATCAATATCATTAATGGC+TGG - chr7_1:76016987-76017006 Msa1038990:CDS 25.0%
! AATTAGCCATTCCTATATAA+AGG - chr7_1:76017064-76017083 Msa1038990:CDS 25.0%
CATTTGTACATCTATGTTTG+TGG + chr7_1:76010365-76010384 None:intergenic 30.0%
CACAAACATAGATGTACAAA+TGG - chr7_1:76010363-76010382 Msa1038990:three_prime_UTR 30.0%
AAACATAGATGTACAAATGG+TGG - chr7_1:76010366-76010385 Msa1038990:three_prime_UTR 30.0%
GACTGAAAAATGTGAATCAT+AGG + chr7_1:76010676-76010695 None:intergenic 30.0%
ACATTGTCAAGTATCTTTCT+TGG - chr7_1:76010782-76010801 Msa1038990:three_prime_UTR 30.0%
CATTGTCAAGTATCTTTCTT+GGG - chr7_1:76010783-76010802 Msa1038990:three_prime_UTR 30.0%
TTGGGATCTAGGAATAAAAA+AGG - chr7_1:76010801-76010820 Msa1038990:three_prime_UTR 30.0%
TGGGATCTAGGAATAAAAAA+GGG - chr7_1:76010802-76010821 Msa1038990:three_prime_UTR 30.0%
AATAAAAAAGGGATCAAGTC+AGG - chr7_1:76010813-76010832 Msa1038990:three_prime_UTR 30.0%
! CTTTTGCTTATATTAGTGAC+CGG + chr7_1:76011033-76011052 None:intergenic 30.0%
! CTTTTGCTTATATTAGTGAC+CGG - chr7_1:76011033-76011052 Msa1038990:three_prime_UTR 30.0%
CAGTCTTTACTTATCCAAAA+TGG + chr7_1:76011115-76011134 None:intergenic 30.0%
TATGCAAAAATAAGTGTCCT+TGG - chr7_1:76011196-76011215 Msa1038990:CDS 30.0%
ATGCAAAAATAAGTGTCCTT+GGG - chr7_1:76011197-76011216 Msa1038990:CDS 30.0%
! ATTAGGCTTAATTGCACTTT+TGG - chr7_1:76011225-76011244 Msa1038990:intron 30.0%
!! CTCTCTAAGTATTGAATCTT+TGG - chr7_1:76011307-76011326 Msa1038990:intron 30.0%
! TATTGAATCTTTGGCAGTTT+TGG - chr7_1:76011316-76011335 Msa1038990:intron 30.0%
!!! TATATTTTTTTTGGCCTTGG+GGG + chr7_1:76011342-76011361 None:intergenic 30.0%
! TATTGAATCTTTGGCAGTTT+TGG + chr7_1:76011316-76011335 None:intergenic 30.0%
!! TGTTTGGCTCTTTAATAAGT+TGG + chr7_1:76011526-76011545 None:intergenic 30.0%
TCAACTAGGTCAAGTAATAT+GGG - chr7_1:76012016-76012035 Msa1038990:intron 30.0%
!! TGTGTGAGTTTATTTTCCAA+CGG - chr7_1:76012316-76012335 Msa1038990:CDS 30.0%
TTATTTGAACAACTCTTCCT+TGG - chr7_1:76012499-76012518 Msa1038990:intron 30.0%
TATTTGAACAACTCTTCCTT+GGG - chr7_1:76012500-76012519 Msa1038990:intron 30.0%
! ACTTTCTCTCTCTATTGTTT+TGG + chr7_1:76012580-76012599 None:intergenic 30.0%
!! GTGAGTGTGAATATTTTTGT+TGG - chr7_1:76012701-76012720 Msa1038990:intron 30.0%
TTGTTGGAATTATAGAGATC+AGG - chr7_1:76012717-76012736 Msa1038990:intron 30.0%
AAAAATAGCTTACTTGGAGA+GGG + chr7_1:76012895-76012914 None:intergenic 30.0%
AAAAAATAGCTTACTTGGAG+AGG + chr7_1:76012896-76012915 None:intergenic 30.0%
TGGCAAAAAAATAGCTTACT+TGG + chr7_1:76012901-76012920 None:intergenic 30.0%
!!! TTTTTTTGCCAGATTGAGTT+TGG - chr7_1:76012910-76012929 Msa1038990:intron 30.0%
! TTTGTTCATCTCAAGCATTT+TGG + chr7_1:76013029-76013048 None:intergenic 30.0%
! CTCTTGATAGTAAACATTTG+TGG + chr7_1:76013093-76013112 None:intergenic 30.0%
GATTATTTGAGCTTATCTAC+CGG + chr7_1:76013286-76013305 None:intergenic 30.0%
TTTCTTGCCATGACTTTAAT+AGG - chr7_1:76013334-76013353 Msa1038990:CDS 30.0%
CGTATTTCCTATTAAAGTCA+TGG + chr7_1:76013344-76013363 None:intergenic 30.0%
ACTTTAATAGGAAATACGGA+TGG - chr7_1:76013346-76013365 Msa1038990:intron 30.0%
CTTTAATAGGAAATACGGAT+GGG - chr7_1:76013347-76013366 Msa1038990:intron 30.0%
! ACTATTTCCACTTCATTTTC+TGG - chr7_1:76013434-76013453 Msa1038990:intron 30.0%
CCAATGCTTCAATTAAACAA+AGG + chr7_1:76013518-76013537 None:intergenic 30.0%
! CCTTTGTTTAATTGAAGCAT+TGG - chr7_1:76013515-76013534 Msa1038990:intron 30.0%
! TATTTAGAGTCTGTTTGGTT+TGG - chr7_1:76013576-76013595 Msa1038990:intron 30.0%
! GATTTGTTTCATAGCTTTCA+CGG - chr7_1:76013653-76013672 Msa1038990:intron 30.0%
ATAATCAGATGTCACAAACT+AGG - chr7_1:76013779-76013798 Msa1038990:intron 30.0%
TCATATGAATTATTTCACCG+TGG + chr7_1:76013834-76013853 None:intergenic 30.0%
! GAGAAATATCCTTTTCTTAG+TGG - chr7_1:76014221-76014240 Msa1038990:intron 30.0%
! ACCTATCTGCTATAATTTTG+TGG - chr7_1:76014547-76014566 Msa1038990:intron 30.0%
ACCACAAAATTATAGCAGAT+AGG + chr7_1:76014551-76014570 None:intergenic 30.0%
AAAAAGCTACATGTACAAGA+AGG + chr7_1:76014783-76014802 None:intergenic 30.0%
GTTTGCTCAATATATAGGAA+TGG - chr7_1:76014911-76014930 Msa1038990:intron 30.0%
CCCTAACATATCTTATCATT+TGG - chr7_1:76014975-76014994 Msa1038990:intron 30.0%
AAAAAAGATTCAACAGGAAC+TGG - chr7_1:76015005-76015024 Msa1038990:intron 30.0%
AGATACCTTTCAAGAACATT+GGG + chr7_1:76015036-76015055 None:intergenic 30.0%
AAGATACCTTTCAAGAACAT+TGG + chr7_1:76015037-76015056 None:intergenic 30.0%
TGAAATAAGCATGGAAGAAA+CGG + chr7_1:76015074-76015093 None:intergenic 30.0%
TTATTTCATCCTCTATGCTT+TGG - chr7_1:76015086-76015105 Msa1038990:intron 30.0%
AAACTAGTATGAGAAATGCT+AGG - chr7_1:76015176-76015195 Msa1038990:intron 30.0%
CTAATACTCACTCTCTTATA+GGG + chr7_1:76015304-76015323 None:intergenic 30.0%
TCTAATACTCACTCTCTTAT+AGG + chr7_1:76015305-76015324 None:intergenic 30.0%
AGAAATAAACGCAAAAGAGA+GGG + chr7_1:76015440-76015459 None:intergenic 30.0%
AAGAAATAAACGCAAAAGAG+AGG + chr7_1:76015441-76015460 None:intergenic 30.0%
CTTAGAAAACATTTGTTCCA+TGG - chr7_1:76015458-76015477 Msa1038990:intron 30.0%
! AAAAGTGTACAAATTAGCCA+TGG + chr7_1:76015478-76015497 None:intergenic 30.0%
!!! TTTTTTCAACAAAGTCAGAG+AGG + chr7_1:76015715-76015734 None:intergenic 30.0%
! CTGGTTTCTGTAATCTTTTA+AGG + chr7_1:76015818-76015837 None:intergenic 30.0%
CTTAAAAGATTACAGAAACC+AGG - chr7_1:76015816-76015835 Msa1038990:intron 30.0%
! GATCATGTCATTTCAGAATT+TGG - chr7_1:76015930-76015949 Msa1038990:intron 30.0%
GTTATTGTGAATAGTGAAAG+TGG - chr7_1:76016072-76016091 Msa1038990:intron 30.0%
AAACCATCATTATCTGATGA+AGG - chr7_1:76016111-76016130 Msa1038990:intron 30.0%
AACCAACTCATTGAATTATG+AGG - chr7_1:76016186-76016205 Msa1038990:intron 30.0%
AAAAAAAAGGGGAGAAAAAG+AGG - chr7_1:76016212-76016231 Msa1038990:intron 30.0%
ACAGATTGTAAACATGTCAT+GGG + chr7_1:76016266-76016285 None:intergenic 30.0%
AACAGATTGTAAACATGTCA+TGG + chr7_1:76016267-76016286 None:intergenic 30.0%
TTTACATCAGATGAACAAAC+AGG + chr7_1:76016355-76016374 None:intergenic 30.0%
CCTAGCAAAAAGAAAACAAA+AGG + chr7_1:76017016-76017035 None:intergenic 30.0%
!!! CCTTTTGTTTTCTTTTTGCT+AGG - chr7_1:76017013-76017032 Msa1038990:CDS 30.0%
CAGTACTACTGATCTTTGTT+GGG + chr7_1:76010284-76010303 None:intergenic 35.0%
ACAGTACTACTGATCTTTGT+TGG + chr7_1:76010285-76010304 None:intergenic 35.0%
GTAAAGTAAAAAAGCAGCAG+TGG + chr7_1:76010538-76010557 None:intergenic 35.0%
!! TTTTGTTGTCGGGTCAATTT+TGG - chr7_1:76010723-76010742 Msa1038990:three_prime_UTR 35.0%
!!! AAAACTGGCTTGATTTTCCT+GGG + chr7_1:76010754-76010773 None:intergenic 35.0%
AAGTATCTTTCTTGGGATCT+AGG - chr7_1:76010790-76010809 Msa1038990:three_prime_UTR 35.0%
TCGGGTAAAAGAATATCCTA+TGG + chr7_1:76010849-76010868 None:intergenic 35.0%
! ATAGGATTAGTGTTGTTGTC+AGG - chr7_1:76011088-76011107 Msa1038990:three_prime_UTR 35.0%
CTGCCAAAGATTCAATACTT+AGG - chr7_1:76011417-76011436 Msa1038990:CDS 35.0%
!! CCTCCTAAGTATTGAATCTT+TGG + chr7_1:76011423-76011442 None:intergenic 35.0%
CCAAAGATTCAATACTTAGG+AGG - chr7_1:76011420-76011439 Msa1038990:CDS 35.0%
! TGGCTCTTTAATAAGTTGGA+AGG + chr7_1:76011522-76011541 None:intergenic 35.0%
!!! AGGCGCTTGTTTTTTTCTTA+GGG + chr7_1:76011553-76011572 None:intergenic 35.0%
!!! GTGTCTTTAGGACATTTTCA+AGG + chr7_1:76011741-76011760 None:intergenic 35.0%
GTCAACTAGGTCAAGTAATA+TGG - chr7_1:76012015-76012034 Msa1038990:intron 35.0%
! TCTAGGGCACATTTATATCA+TGG + chr7_1:76012161-76012180 None:intergenic 35.0%
TCTAGAAGACTTAACTCAAC+TGG - chr7_1:76012230-76012249 Msa1038990:intron 35.0%
TGGCAAATGTCAAAATTGCA+AGG - chr7_1:76012250-76012269 Msa1038990:CDS 35.0%
AAATGTCAAAATTGCAAGGC+CGG - chr7_1:76012254-76012273 Msa1038990:CDS 35.0%
!!! CCTTTTGGTTTTAGATGAAG+TGG + chr7_1:76012346-76012365 None:intergenic 35.0%
! CCACTTCATCTAAAACCAAA+AGG - chr7_1:76012343-76012362 Msa1038990:CDS 35.0%
TTATCCAAGAAATTGTCCCA+AGG + chr7_1:76012519-76012538 None:intergenic 35.0%
TTGGAAACAAGCTTGTGATT+TGG - chr7_1:76012809-76012828 Msa1038990:CDS 35.0%
GAGTTTGGCTATGCTTTAAT+TGG - chr7_1:76012925-76012944 Msa1038990:intron 35.0%
GCTTGAGATGAACAAAAAAG+AGG - chr7_1:76013033-76013052 Msa1038990:intron 35.0%
TTAAGCTATCGTAGAGCTTA+TGG - chr7_1:76013182-76013201 Msa1038990:intron 35.0%
AGTACCACAAATGTTTATGC+CGG - chr7_1:76013264-76013283 Msa1038990:CDS 35.0%
TTGTTATGACTGAACTTCAC+AGG - chr7_1:76013465-76013484 Msa1038990:intron 35.0%
! AGCTCTTTTAGACATGAGTT+TGG + chr7_1:76013613-76013632 None:intergenic 35.0%
!! CGTTGTATTTTTCAAACGTG+CGG + chr7_1:76013694-76013713 None:intergenic 35.0%
TATCAGTGTATGCTTATCCA+CGG - chr7_1:76013814-76013833 Msa1038990:CDS 35.0%
AGGAACATACTTTCTCACTA+TGG - chr7_1:76013933-76013952 Msa1038990:intron 35.0%
TCTCACTATGGAAAATTGCT+TGG - chr7_1:76013945-76013964 Msa1038990:intron 35.0%
! TAATAACCCTAGGTCAGTTT+TGG - chr7_1:76014046-76014065 Msa1038990:intron 35.0%
! AATAACCCTAGGTCAGTTTT+GGG - chr7_1:76014047-76014066 Msa1038990:intron 35.0%
AGCAGCAAAAGAAATCGAAA+AGG + chr7_1:76014082-76014101 None:intergenic 35.0%
! ATTTTTGAATGGATCCATGC+AGG - chr7_1:76014123-76014142 Msa1038990:intron 35.0%
! TTTTTGAATGGATCCATGCA+GGG - chr7_1:76014124-76014143 Msa1038990:intron 35.0%
GCTATCAAATGTGATATCCA+AGG - chr7_1:76014325-76014344 Msa1038990:intron 35.0%
TGTGATATCCAAGGATTGAA+AGG - chr7_1:76014334-76014353 Msa1038990:intron 35.0%
GTGATATCCAAGGATTGAAA+GGG - chr7_1:76014335-76014354 Msa1038990:intron 35.0%
CGCATCATATTACAACCATA+CGG - chr7_1:76014443-76014462 Msa1038990:CDS 35.0%
TACAACCATACGGAAAACAT+TGG - chr7_1:76014453-76014472 Msa1038990:CDS 35.0%
TTGGCGGAAATTAATCAAGA+AGG - chr7_1:76014472-76014491 Msa1038990:CDS 35.0%
TTATAGCAGATAGGTAGTCA+AGG + chr7_1:76014542-76014561 None:intergenic 35.0%
GTACAAGAAGGAGTTAAATC+AGG + chr7_1:76014771-76014790 None:intergenic 35.0%
ATATATAGGAATGGAGAGCT+AGG - chr7_1:76014920-76014939 Msa1038990:intron 35.0%
TGGCACAAAAAAGATTCAAC+AGG - chr7_1:76014999-76015018 Msa1038990:intron 35.0%
CATAGAGGATGAAATAAGCA+TGG + chr7_1:76015083-76015102 None:intergenic 35.0%
ACTCCTCAAACTAGTATTGT+CGG - chr7_1:76015354-76015373 Msa1038990:intron 35.0%
GAAATAAACGCAAAAGAGAG+GGG + chr7_1:76015439-76015458 None:intergenic 35.0%
! CAGGTTCTTTGAAAACAAAG+AGG - chr7_1:76015561-76015580 Msa1038990:intron 35.0%
GGTTTCATCACAAATAACTC+TGG + chr7_1:76015667-76015686 None:intergenic 35.0%
TTGTGCTTGAATTTGTGAAC+CGG - chr7_1:76016007-76016026 Msa1038990:intron 35.0%
GATTTGCAGGAATAAGGATA+AGG - chr7_1:76016050-76016069 Msa1038990:intron 35.0%
CATCATTATCTGATGAAGGT+GGG - chr7_1:76016115-76016134 Msa1038990:intron 35.0%
ATCATTATCTGATGAAGGTG+GGG - chr7_1:76016116-76016135 Msa1038990:intron 35.0%
CTATCTATTACTCCAAAACC+AGG + chr7_1:76016147-76016166 None:intergenic 35.0%
AGCCTCATAATTCAATGAGT+TGG + chr7_1:76016191-76016210 None:intergenic 35.0%
! CAACATTCCGTTTAAAGCTT+TGG + chr7_1:76016729-76016748 None:intergenic 35.0%
!! AAGCTTTAAACGGAATGTTG+TGG - chr7_1:76016729-76016748 Msa1038990:intron 35.0%
AAAAGCAAAGGAAAGGGAAA+AGG - chr7_1:76016826-76016845 Msa1038990:CDS 35.0%
! GAAATAGTGGGAAATCTGAA+TGG + chr7_1:76016924-76016943 None:intergenic 35.0%
TAGCCATTCCTATATAAAGG+AGG - chr7_1:76017067-76017086 Msa1038990:CDS 35.0%
TTGTCATGGCTGAAAAGTGA+AGG - chr7_1:76010164-76010183 Msa1038990:three_prime_UTR 40.0%
GTAGATGAGACGAAAGATGA+AGG + chr7_1:76010259-76010278 None:intergenic 40.0%
CTATGTTTGTGGTAGAACTC+AGG + chr7_1:76010354-76010373 None:intergenic 40.0%
!! TTAAAGCTAGGAAGCGTCAT+GGG + chr7_1:76010403-76010422 None:intergenic 40.0%
!! ATTAAAGCTAGGAAGCGTCA+TGG + chr7_1:76010404-76010423 None:intergenic 40.0%
AACAAGAAGACCATTGAGAG+TGG + chr7_1:76010488-76010507 None:intergenic 40.0%
ACTCTCAATGGTCTTCTTGT+TGG - chr7_1:76010487-76010506 Msa1038990:three_prime_UTR 40.0%
CTCTCAATGGTCTTCTTGTT+GGG - chr7_1:76010488-76010507 Msa1038990:three_prime_UTR 40.0%
TCTCAATGGTCTTCTTGTTG+GGG - chr7_1:76010489-76010508 Msa1038990:three_prime_UTR 40.0%
TGTTGGGGATAAATCTGTTG+AGG - chr7_1:76010504-76010523 Msa1038990:three_prime_UTR 40.0%
!!! ACAGCAGCTAGTTTTGTTGT+CGG - chr7_1:76010712-76010731 Msa1038990:three_prime_UTR 40.0%
!!! CAAAACTGGCTTGATTTTCC+TGG + chr7_1:76010755-76010774 None:intergenic 40.0%
! CAGGAAAATCAAGCCAGTTT+TGG - chr7_1:76010753-76010772 Msa1038990:three_prime_UTR 40.0%
TGCTTATATTAGTGACCGGA+GGG + chr7_1:76011037-76011056 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + chr7_1:76011036-76011055 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr7_1:76011036-76011055 Msa1038990:three_prime_UTR 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr7_1:76011037-76011056 Msa1038990:three_prime_UTR 40.0%
! TGTTGTTGTCAGGTCCATTT+TGG - chr7_1:76011098-76011117 Msa1038990:exon 40.0%
TTAAGCCTAATAAGCTCCCA+AGG + chr7_1:76011216-76011235 None:intergenic 40.0%
!!! GCAAGTTTTGGAAAGATAGG+GGG + chr7_1:76011479-76011498 None:intergenic 40.0%
!!! CGCAAGTTTTGGAAAGATAG+GGG + chr7_1:76011478-76011497 None:intergenic 40.0%
!!! CCGCAAGTTTTGGAAAGATA+GGG + chr7_1:76011477-76011496 None:intergenic 40.0%
CCCTATCTTTCCAAAACTTG+CGG - chr7_1:76011250-76011269 Msa1038990:intron 40.0%
!!! ACCGCAAGTTTTGGAAAGAT+AGG + chr7_1:76011476-76011495 None:intergenic 40.0%
!!! ACCGCAAGTTTTGGAAAGAT+AGG - chr7_1:76011476-76011495 Msa1038990:CDS 40.0%
CCCTATCTTTCCAAAACTTG+CGG + chr7_1:76011250-76011269 None:intergenic 40.0%
!!! CCGCAAGTTTTGGAAAGATA+GGG - chr7_1:76011477-76011496 Msa1038990:CDS 40.0%
!!! CGCAAGTTTTGGAAAGATAG+GGG - chr7_1:76011478-76011497 Msa1038990:CDS 40.0%
!!! GCAAGTTTTGGAAAGATAGG+GGG - chr7_1:76011479-76011498 Msa1038990:CDS 40.0%
!!! GAGGCGCTTGTTTTTTTCTT+AGG + chr7_1:76011554-76011573 None:intergenic 40.0%
GTCTTACAACGAGTGTCTTT+AGG + chr7_1:76011753-76011772 None:intergenic 40.0%
CTAGGTCAAGTAATATGGGA+TGG - chr7_1:76012020-76012039 Msa1038990:intron 40.0%
GTCAAGTAATATGGGATGGA+GGG - chr7_1:76012024-76012043 Msa1038990:intron 40.0%
! CTCTTGCTTCTTTTGAGCTT+CGG + chr7_1:76012060-76012079 None:intergenic 40.0%
AACAATACTCCTCGACTCTA+GGG + chr7_1:76012177-76012196 None:intergenic 40.0%
AAACAATACTCCTCGACTCT+AGG + chr7_1:76012178-76012197 None:intergenic 40.0%
TAAACTCACACACAACTGTG+AGG + chr7_1:76012308-76012327 None:intergenic 40.0%
TAGATGAAGTGGTAATCCGT+TGG + chr7_1:76012335-76012354 None:intergenic 40.0%
TCTTCCTTGGGACAATTTCT+TGG - chr7_1:76012512-76012531 Msa1038990:intron 40.0%
TCCAATGAGTTTCAGGAAGA+GGG + chr7_1:76012794-76012813 None:intergenic 40.0%
TTCCAATGAGTTTCAGGAAG+AGG + chr7_1:76012795-76012814 None:intergenic 40.0%
GCTTGTTTCCAATGAGTTTC+AGG + chr7_1:76012801-76012820 None:intergenic 40.0%
! ACTTGTTGATCGTGTTAGCT+TGG - chr7_1:76012848-76012867 Msa1038990:CDS 40.0%
AAGCATAGCCAAACTCAATC+TGG + chr7_1:76012921-76012940 None:intergenic 40.0%
TCTACCGGCATAAACATTTG+TGG + chr7_1:76013271-76013290 None:intergenic 40.0%
!! TCCACTTCATTTTCTGGTGT+TGG - chr7_1:76013440-76013459 Msa1038990:intron 40.0%
ACCAACACCAGAAAATGAAG+TGG + chr7_1:76013444-76013463 None:intergenic 40.0%
! GTCTAAAAGAGCTACTTTCG+TGG - chr7_1:76013620-76013639 Msa1038990:intron 40.0%
!! TATTTTTCAAACGTGCGGCA+AGG + chr7_1:76013689-76013708 None:intergenic 40.0%
ACTCCAAACACATGCTTAGT+GGG - chr7_1:76013716-76013735 Msa1038990:intron 40.0%
!! AGTATTGACAGGAACCCTTT+CGG + chr7_1:76013979-76013998 None:intergenic 40.0%
! GGAAGGAGTATAATAACCCT+AGG - chr7_1:76014036-76014055 Msa1038990:intron 40.0%
! ATAACCCTAGGTCAGTTTTG+GGG - chr7_1:76014048-76014067 Msa1038990:intron 40.0%
! TTTTCCCCAAAACTGACCTA+GGG + chr7_1:76014055-76014074 None:intergenic 40.0%
! ATTTTCCCCAAAACTGACCT+AGG + chr7_1:76014056-76014075 None:intergenic 40.0%
GAATTGCAGACACAAAATGC+TGG + chr7_1:76014196-76014215 None:intergenic 40.0%
CAAACAACCCTTTCAATCCT+TGG + chr7_1:76014345-76014364 None:intergenic 40.0%
TGATGCGTGTCACAAAGTTA+AGG + chr7_1:76014430-76014449 None:intergenic 40.0%
AACCATACGGAAAACATTGG+CGG - chr7_1:76014456-76014475 Msa1038990:CDS 40.0%
!! TACACAGAAAGTGTTCCATC+TGG + chr7_1:76014508-76014527 None:intergenic 40.0%
! TATAATGTCATGCCACTTGC+AGG - chr7_1:76014604-76014623 Msa1038990:intron 40.0%
! ATAATGTCATGCCACTTGCA+GGG - chr7_1:76014605-76014624 Msa1038990:intron 40.0%
TACACCAGTTGACTATCCTT+CGG - chr7_1:76014668-76014687 Msa1038990:intron 40.0%
! GAAAGCACATGTTTCTGTGT+TGG + chr7_1:76014747-76014766 None:intergenic 40.0%
ACTGTAAGAGCTCATCGTAT+AGG + chr7_1:76014893-76014912 None:intergenic 40.0%
CTACTACTTCCAAAGCATAG+AGG + chr7_1:76015098-76015117 None:intergenic 40.0%
TTTATTGGGTGAAACCCATG+TGG - chr7_1:76015223-76015242 Msa1038990:intron 40.0%
TTATTGGGTGAAACCCATGT+GGG - chr7_1:76015224-76015243 Msa1038990:intron 40.0%
AAAATGCATCCCGCATAAAG+TGG + chr7_1:76015255-76015274 None:intergenic 40.0%
CTTATAGGGTGAAAGTCATG+TGG + chr7_1:76015290-76015309 None:intergenic 40.0%
!! TACTAGTTTGAGGAGTGCTA+TGG + chr7_1:76015350-76015369 None:intergenic 40.0%
AAACTAGTATTGTCGGTGCA+CGG - chr7_1:76015361-76015380 Msa1038990:intron 40.0%
! CCTGCTTACAGTTTTTCTCA+AGG + chr7_1:76015545-76015564 None:intergenic 40.0%
CCTTGAGAAAAACTGTAAGC+AGG - chr7_1:76015542-76015561 Msa1038990:intron 40.0%
AAACTGCGTAAATGCTTTGC+AGG - chr7_1:76015592-76015611 Msa1038990:intron 40.0%
AACTGCGTAAATGCTTTGCA+GGG - chr7_1:76015593-76015612 Msa1038990:intron 40.0%
CTGCTTACATACTTATGCAG+AGG - chr7_1:76015853-76015872 Msa1038990:intron 40.0%
GAGGATATTTCCAGCTAACA+CGG - chr7_1:76015872-76015891 Msa1038990:intron 40.0%
!! GCGTCAATTTTGATGCGTAA+TGG - chr7_1:76015894-76015913 Msa1038990:intron 40.0%
AGTCATAAGTGGATGTCATC+CGG + chr7_1:76016029-76016048 None:intergenic 40.0%
TGACTGGATTTGCAGGAATA+AGG - chr7_1:76016044-76016063 Msa1038990:intron 40.0%
GAATAGTGAAAGTGGCTACA+TGG - chr7_1:76016080-76016099 Msa1038990:intron 40.0%
CCACCTTCATCAGATAATGA+TGG + chr7_1:76016117-76016136 None:intergenic 40.0%
CCATCATTATCTGATGAAGG+TGG - chr7_1:76016114-76016133 Msa1038990:intron 40.0%
!! TGAGTTGGTTTCATCATGTG+AGG + chr7_1:76016176-76016195 None:intergenic 40.0%
TGTAAACATGTCATGGGAGA+AGG + chr7_1:76016260-76016279 None:intergenic 40.0%
! GACATTTTACTTGGACCCAA+CGG - chr7_1:76016452-76016471 Msa1038990:intron 40.0%
! TATGAAATGTGTTGGCCGTT+GGG + chr7_1:76016470-76016489 None:intergenic 40.0%
! ATATGAAATGTGTTGGCCGT+TGG + chr7_1:76016471-76016490 None:intergenic 40.0%
TGGGAACAACAACTTTCTGA+TGG + chr7_1:76016534-76016553 None:intergenic 40.0%
CTTACTGATGAGAACCACAA+TGG - chr7_1:76016575-76016594 Msa1038990:intron 40.0%
GCGCTTAAAAGCAAAGGAAA+GGG - chr7_1:76016820-76016839 Msa1038990:CDS 40.0%
ACGCCTCCTTTATATAGGAA+TGG + chr7_1:76017073-76017092 None:intergenic 40.0%
GTTACACGCCTCCTTTATAT+AGG + chr7_1:76017078-76017097 None:intergenic 40.0%
GGCTGAAAAGTGAAGGTCAA+TGG - chr7_1:76010171-76010190 Msa1038990:three_prime_UTR 45.0%
AAGTGAAGGTCAATGGTTGC+TGG - chr7_1:76010178-76010197 Msa1038990:three_prime_UTR 45.0%
CTTGTCTTTGCCACTCTCAA+TGG - chr7_1:76010475-76010494 Msa1038990:three_prime_UTR 45.0%
!!! CAGCAGCTAGTTTTGTTGTC+GGG - chr7_1:76010713-76010732 Msa1038990:three_prime_UTR 45.0%
! GGTCAATTTTGGATAGTCCC+AGG - chr7_1:76010734-76010753 Msa1038990:three_prime_UTR 45.0%
GTCAGGTCAAACCTTTCCAT+AGG - chr7_1:76010830-76010849 Msa1038990:three_prime_UTR 45.0%
AACTAGTACAGTACACCCTC+CGG - chr7_1:76010902-76010921 Msa1038990:three_prime_UTR 45.0%
AGATGAACATGTACACCCTC+CGG + chr7_1:76011055-76011074 None:intergenic 45.0%
AGTGTCCTTGGGAGCTTATT+AGG - chr7_1:76011208-76011227 Msa1038990:CDS 45.0%
TTATTTACTGACCAGGCTCC+AGG - chr7_1:76011626-76011645 Msa1038990:CDS 45.0%
TATTTACTGACCAGGCTCCA+GGG - chr7_1:76011627-76011646 Msa1038990:CDS 45.0%
! AATTTGGAATCCTTGTGCCC+TGG + chr7_1:76011647-76011666 None:intergenic 45.0%
CATACGTGACAGAGTCAACT+AGG - chr7_1:76012002-76012021 Msa1038990:intron 45.0%
GGTCAAGTAATATGGGATGG+AGG - chr7_1:76012023-76012042 Msa1038990:intron 45.0%
CGAAGCTCAAAAGAAGCAAG+AGG - chr7_1:76012058-76012077 Msa1038990:intron 45.0%
! AAAGAAGCAAGAGGCGCAAA+TGG - chr7_1:76012067-76012086 Msa1038990:intron 45.0%
! AAGAAGCAAGAGGCGCAAAT+GGG - chr7_1:76012068-76012087 Msa1038990:intron 45.0%
ATAAATGTGCCCTAGAGTCG+AGG - chr7_1:76012165-76012184 Msa1038990:intron 45.0%
TAGAGATCAGGAAGAGTTCC+TGG - chr7_1:76012729-76012748 Msa1038990:intron 45.0%
GGGGAGGTAGTAAGGAAAAT+GGG + chr7_1:76012773-76012792 None:intergenic 45.0%
CAATGAGTTTCAGGAAGAGG+GGG + chr7_1:76012792-76012811 None:intergenic 45.0%
CCAATGAGTTTCAGGAAGAG+GGG + chr7_1:76012793-76012812 None:intergenic 45.0%
! GTTGATCGTGTTAGCTTGGA+TGG - chr7_1:76012852-76012871 Msa1038990:CDS 45.0%
CTTACTTGGAGAGGGATTGT+TGG + chr7_1:76012887-76012906 None:intergenic 45.0%
!! AGTCTGTTTGGTTTGGCAGT+GGG - chr7_1:76013583-76013602 Msa1038990:intron 45.0%
CACTAAGCATGTGTTTGGAG+TGG + chr7_1:76013717-76013736 None:intergenic 45.0%
CACTCCAAACACATGCTTAG+TGG - chr7_1:76013715-76013734 Msa1038990:intron 45.0%
CTCCAAACACATGCTTAGTG+GGG - chr7_1:76013717-76013736 Msa1038990:intron 45.0%
TCCAAACACATGCTTAGTGG+GGG - chr7_1:76013718-76013737 Msa1038990:intron 45.0%
! TGCTTGGACTAGATTCCGAA+AGG - chr7_1:76013961-76013980 Msa1038990:intron 45.0%
! GCTTGGACTAGATTCCGAAA+GGG - chr7_1:76013962-76013981 Msa1038990:intron 45.0%
GGCATTAGCTAAAGCTTGGA+AGG - chr7_1:76014019-76014038 Msa1038990:intron 45.0%
! TTCCGCCAATGTTTTCCGTA+TGG + chr7_1:76014461-76014480 None:intergenic 45.0%
GAAGGAGAAATTCTGCCAGA+TGG - chr7_1:76014490-76014509 Msa1038990:CDS 45.0%
CAGATAGGTAGTCAAGGCTA+GGG + chr7_1:76014536-76014555 None:intergenic 45.0%
GATTCCGAAGGATAGTCAAC+TGG + chr7_1:76014675-76014694 None:intergenic 45.0%
GAGCTCATCGTATAGGTACA+CGG + chr7_1:76014886-76014905 None:intergenic 45.0%
AGATTCAACAGGAACTGGCA+AGG - chr7_1:76015010-76015029 Msa1038990:intron 45.0%
CAAGGCCCAATGTTCTTGAA+AGG - chr7_1:76015028-76015047 Msa1038990:intron 45.0%
TAAAGTGGTGAGACCCACAT+GGG + chr7_1:76015240-76015259 None:intergenic 45.0%
ATAAAGTGGTGAGACCCACA+TGG + chr7_1:76015241-76015260 None:intergenic 45.0%
! CGGGATGCATTTTCAAAGTG+TGG - chr7_1:76015262-76015281 Msa1038990:intron 45.0%
! GCACCGACAATACTAGTTTG+AGG + chr7_1:76015360-76015379 None:intergenic 45.0%
AACTAGTATTGTCGGTGCAC+GGG - chr7_1:76015362-76015381 Msa1038990:intron 45.0%
TAAACGCAAAAGAGAGGGGA+GGG + chr7_1:76015435-76015454 None:intergenic 45.0%
ATAAACGCAAAAGAGAGGGG+AGG + chr7_1:76015436-76015455 None:intergenic 45.0%
GTAAATGCTTTGCAGGGTTG+TGG - chr7_1:76015599-76015618 Msa1038990:intron 45.0%
GTGATGAAACCCCAAAGAGA+AGG - chr7_1:76015676-76015695 Msa1038990:intron 45.0%
ATGAAACCCCAAAGAGAAGG+AGG - chr7_1:76015679-76015698 Msa1038990:intron 45.0%
AAGACCTCCTCCTTCTCTTT+GGG + chr7_1:76015689-76015708 None:intergenic 45.0%
AAAGACCTCCTCCTTCTCTT+TGG + chr7_1:76015690-76015709 None:intergenic 45.0%
AAAATTGACGCCGTGTTAGC+TGG + chr7_1:76015885-76015904 None:intergenic 45.0%
GGATGACATCCACTTATGAC+TGG - chr7_1:76016028-76016047 Msa1038990:intron 45.0%
CCTGCAAATCCAGTCATAAG+TGG + chr7_1:76016040-76016059 None:intergenic 45.0%
CCACTTATGACTGGATTTGC+AGG - chr7_1:76016037-76016056 Msa1038990:intron 45.0%
! GAGAACCACAATGGCATTGA+AGG - chr7_1:76016584-76016603 Msa1038990:intron 45.0%
! AACCACAATGGCATTGAAGG+AGG - chr7_1:76016587-76016606 Msa1038990:intron 45.0%
! ACCACAATGGCATTGAAGGA+GGG - chr7_1:76016588-76016607 Msa1038990:intron 45.0%
TATGACCAAGAGAGAGCAAG+AGG - chr7_1:76016798-76016817 Msa1038990:CDS 45.0%
!! CAAGAGGCGCTTAAAAGCAA+AGG - chr7_1:76016814-76016833 Msa1038990:CDS 45.0%
GGCGCTTAAAAGCAAAGGAA+AGG - chr7_1:76016819-76016838 Msa1038990:CDS 45.0%
GCAAAGGAAAGGGAAAAGGA+TGG - chr7_1:76016830-76016849 Msa1038990:CDS 45.0%
AAGGATGGTGCAACCAGTTA+AGG - chr7_1:76016845-76016864 Msa1038990:CDS 45.0%
!!! AATAATTAACTTTTTTAATT+TGG + chr7_1:76011663-76011682 None:intergenic 5.0%
!!! ATATTTTTAAGTAATTATTA+AGG + chr7_1:76011775-76011794 None:intergenic 5.0%
AGGTCAATGGTTGCTGGATC+TGG - chr7_1:76010184-76010203 Msa1038990:three_prime_UTR 50.0%
GGTCAATGGTTGCTGGATCT+GGG - chr7_1:76010185-76010204 Msa1038990:three_prime_UTR 50.0%
!! TCTGGGTGCTTGGTTTGGTT+TGG - chr7_1:76010202-76010221 Msa1038990:three_prime_UTR 50.0%
!! CTGGGTGCTTGGTTTGGTTT+GGG - chr7_1:76010203-76010222 Msa1038990:three_prime_UTR 50.0%
TGACACGTGGCACCTCATTT+AGG - chr7_1:76011367-76011386 Msa1038990:CDS 50.0%
GACACGTGGCACCTCATTTA+GGG - chr7_1:76011368-76011387 Msa1038990:CDS 50.0%
CTGACGTAGCACCCTAAATG+AGG + chr7_1:76011382-76011401 None:intergenic 50.0%
TCAGGAAGAGTTCCTGGTGT+AGG - chr7_1:76012735-76012754 Msa1038990:intron 50.0%
CAGGAAGAGTTCCTGGTGTA+GGG - chr7_1:76012736-76012755 Msa1038990:intron 50.0%
AAGAGTTCCTGGTGTAGGGT+TGG - chr7_1:76012740-76012759 Msa1038990:intron 50.0%
GGGGGAGGTAGTAAGGAAAA+TGG + chr7_1:76012774-76012793 None:intergenic 50.0%
CCCCTCTTCCTGAAACTCAT+TGG - chr7_1:76012790-76012809 Msa1038990:CDS 50.0%
!! GAGTCTGTTTGGTTTGGCAG+TGG - chr7_1:76013582-76013601 Msa1038990:intron 50.0%
AAACGTGCGGCAAGGAATCA+CGG + chr7_1:76013681-76013700 None:intergenic 50.0%
CCAAACACATGCTTAGTGGG+GGG - chr7_1:76013719-76013738 Msa1038990:intron 50.0%
CTGTCAATACTGCCGACAGT+CGG - chr7_1:76013988-76014007 Msa1038990:intron 50.0%
!! CGGAGGCATTAGCTAAAGCT+TGG - chr7_1:76014015-76014034 Msa1038990:intron 50.0%
GCAGATAGGTAGTCAAGGCT+AGG + chr7_1:76014537-76014556 None:intergenic 50.0%
GCAATCGTTTACTTCCGAGC+TGG - chr7_1:76014642-76014661 Msa1038990:intron 50.0%
CAACTGGTGTATAGCCAGCT+CGG + chr7_1:76014659-76014678 None:intergenic 50.0%
!! GAGTCACTCACTGATTCCGA+AGG + chr7_1:76014687-76014706 None:intergenic 50.0%
GTGGGTCTCACCACTTTATG+CGG - chr7_1:76015242-76015261 Msa1038990:intron 50.0%
TGGGTCTCACCACTTTATGC+GGG - chr7_1:76015243-76015262 Msa1038990:intron 50.0%
ACTAGTATTGTCGGTGCACG+GGG - chr7_1:76015363-76015382 Msa1038990:intron 50.0%
AAACGCAAAAGAGAGGGGAG+GGG + chr7_1:76015434-76015453 None:intergenic 50.0%
CTTTGCAGGGTTGTGGAGTT+TGG - chr7_1:76015606-76015625 Msa1038990:intron 50.0%
AAACCCCAAAGAGAAGGAGG+AGG - chr7_1:76015682-76015701 Msa1038990:intron 50.0%
AGACCTCCTCCTTCTCTTTG+GGG + chr7_1:76015688-76015707 None:intergenic 50.0%
GCAGCATCTTCTTGAGAACC+TGG + chr7_1:76015837-76015856 None:intergenic 50.0%
! AGGAGGCGTGTAACTCTTGT+AGG - chr7_1:76017084-76017103 Msa1038990:CDS 50.0%
CTGGATCTGGGTGCTTGGTT+TGG - chr7_1:76010197-76010216 Msa1038990:three_prime_UTR 55.0%
!! AAGCTAGGAAGCGTCATGGG+AGG + chr7_1:76010400-76010419 None:intergenic 55.0%
! GGGGCTGTAACCGCAAGTTT+TGG + chr7_1:76011467-76011486 None:intergenic 55.0%
!! TTTGGCAGTTTTGGCCCCCA+AGG - chr7_1:76011325-76011344 Msa1038990:CDS 55.0%
! TTAGGGTGCTACGTCAGCGT+TGG - chr7_1:76011385-76011404 Msa1038990:CDS 55.0%
! TAGGGTGCTACGTCAGCGTT+GGG - chr7_1:76011386-76011405 Msa1038990:CDS 55.0%
! GGGGCTGTAACCGCAAGTTT+TGG - chr7_1:76011467-76011486 Msa1038990:CDS 55.0%
ACACACAACTGTGAGGTCCC+GGG + chr7_1:76012301-76012320 None:intergenic 55.0%
CACACACAACTGTGAGGTCC+CGG + chr7_1:76012302-76012321 None:intergenic 55.0%
AGATGCACCAACCCTACACC+AGG + chr7_1:76012750-76012769 None:intergenic 55.0%
AGGAAGAGGGGGAGGTAGTA+AGG + chr7_1:76012781-76012800 None:intergenic 55.0%
TGAGTTTCAGGAAGAGGGGG+AGG + chr7_1:76012789-76012808 None:intergenic 55.0%
! TGCCGCTGCTATGGGTTTTG+AGG - chr7_1:76013492-76013511 Msa1038990:intron 55.0%
GGCCTCAAAACCCATAGCAG+CGG + chr7_1:76013497-76013516 None:intergenic 55.0%
CCCCCCACTAAGCATGTGTT+TGG + chr7_1:76013722-76013741 None:intergenic 55.0%
!! CGACTGTCGGCAGTATTGAC+AGG + chr7_1:76013990-76014009 None:intergenic 55.0%
TACTGCCGACAGTCGGTATG+CGG - chr7_1:76013995-76014014 Msa1038990:intron 55.0%
! TGTCATGCCACTTGCAGGGA+TGG - chr7_1:76014609-76014628 Msa1038990:intron 55.0%
TGCTTGTCCATCCCTGCAAG+TGG + chr7_1:76014619-76014638 None:intergenic 55.0%
AACGCAAAAGAGAGGGGAGG+GGG + chr7_1:76015433-76015452 None:intergenic 55.0%
TGCAGGGTTGTGGAGTTTGG+AGG - chr7_1:76015609-76015628 Msa1038990:intron 55.0%
! GATGAAGGTGGGGTTTTGCC+TGG - chr7_1:76016126-76016145 Msa1038990:intron 55.0%
! GGTGGGGTTTTGCCTGGTTT+TGG - chr7_1:76016132-76016151 Msa1038990:intron 55.0%
GCCCTCCTTCAATGCCATTG+TGG + chr7_1:76016592-76016611 None:intergenic 55.0%
AAGCGCCTCTTGCTCTCTCT+TGG + chr7_1:76016806-76016825 None:intergenic 55.0%
GGTTGCTGGATCTGGGTGCT+TGG - chr7_1:76010192-76010211 Msa1038990:three_prime_UTR 60.0%
! AGGGTGCTACGTCAGCGTTG+GGG - chr7_1:76011387-76011406 Msa1038990:CDS 60.0%
AATCCTTGTGCCCTGGAGCC+TGG + chr7_1:76011640-76011659 None:intergenic 60.0%
CAAGGCCGGATGTCATGACC+CGG - chr7_1:76012268-76012287 Msa1038990:CDS 60.0%
AAGGCCGGATGTCATGACCC+GGG - chr7_1:76012269-76012288 Msa1038990:CDS 60.0%
CGAACCCGGGTCATGACATC+CGG + chr7_1:76012276-76012295 None:intergenic 60.0%
TCATGACCCGGGTTCGAACC+CGG - chr7_1:76012280-76012299 Msa1038990:CDS 60.0%
! ACAGGTCAGTGCCGCTGCTA+TGG - chr7_1:76013483-76013502 Msa1038990:intron 60.0%
! CAGGTCAGTGCCGCTGCTAT+GGG - chr7_1:76013484-76013503 Msa1038990:intron 60.0%
! TGCCTCCGCATACCGACTGT+CGG + chr7_1:76014003-76014022 None:intergenic 60.0%
AAAAGAGAGGGGAGGGGGAG+GGG + chr7_1:76015428-76015447 None:intergenic 60.0%
CAAAAGAGAGGGGAGGGGGA+GGG + chr7_1:76015429-76015448 None:intergenic 60.0%
! GGGTGCTACGTCAGCGTTGG+GGG - chr7_1:76011388-76011407 Msa1038990:CDS 65.0%
TGACCAGGCTCCAGGGCACA+AGG - chr7_1:76011634-76011653 Msa1038990:CDS 65.0%
CATGACCCGGGTTCGAACCC+GGG - chr7_1:76012281-76012300 Msa1038990:CDS 65.0%
TGAGGTCCCGGGTTCGAACC+CGG + chr7_1:76012290-76012309 None:intergenic 65.0%
TGCCGACAGTCGGTATGCGG+AGG - chr7_1:76013998-76014017 Msa1038990:intron 65.0%
AAAGAGAGGGGAGGGGGAGG+GGG + chr7_1:76015427-76015446 None:intergenic 65.0%
GCAAAAGAGAGGGGAGGGGG+AGG + chr7_1:76015430-76015449 None:intergenic 65.0%
GAGGTCCCGGGTTCGAACCC+GGG + chr7_1:76012289-76012308 None:intergenic 70.0%
AGAGGGGAGGGGGAGGGGGA+GGG + chr7_1:76015423-76015442 None:intergenic 75.0%
! AGGGGAGGGGGAGGGGGAGG+GGG + chr7_1:76015421-76015440 None:intergenic 80.0%
! GAGGGGAGGGGGAGGGGGAG+GGG + chr7_1:76015422-76015441 None:intergenic 80.0%
! GAGAGGGGAGGGGGAGGGGG+AGG + chr7_1:76015424-76015443 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 76010154 76017139 76010154 ID=Msa1038990;Name=Msa1038990
chr7_1 mRNA 76010154 76017139 76010154 ID=Msa1038990-mRNA-1;Parent=Msa1038990;Name=Msa1038990-mRNA-1;_AED=0.12;_eAED=0.12;_QI=36|0.54|0.58|0.91|0.63|0.75|12|957|536
chr7_1 exon 76010154 76011234 76010154 ID=Msa1038990-mRNA-1:exon:19652;Parent=Msa1038990-mRNA-1
chr7_1 exon 76011320 76011512 76011320 ID=Msa1038990-mRNA-1:exon:19651;Parent=Msa1038990-mRNA-1
chr7_1 exon 76011590 76011729 76011590 ID=Msa1038990-mRNA-1:exon:19650;Parent=Msa1038990-mRNA-1
chr7_1 exon 76012244 76012365 76012244 ID=Msa1038990-mRNA-1:exon:19649;Parent=Msa1038990-mRNA-1
chr7_1 exon 76012466 76012496 76012466 ID=Msa1038990-mRNA-1:exon:19648;Parent=Msa1038990-mRNA-1
chr7_1 exon 76012598 76012667 76012598 ID=Msa1038990-mRNA-1:exon:19647;Parent=Msa1038990-mRNA-1
chr7_1 exon 76012769 76012894 76012769 ID=Msa1038990-mRNA-1:exon:19646;Parent=Msa1038990-mRNA-1
chr7_1 exon 76013051 76013148 76013051 ID=Msa1038990-mRNA-1:exon:19645;Parent=Msa1038990-mRNA-1
chr7_1 exon 76013236 76013358 76013236 ID=Msa1038990-mRNA-1:exon:19644;Parent=Msa1038990-mRNA-1
chr7_1 exon 76013807 76013909 76013807 ID=Msa1038990-mRNA-1:exon:19643;Parent=Msa1038990-mRNA-1
chr7_1 exon 76014392 76014536 76014392 ID=Msa1038990-mRNA-1:exon:19642;Parent=Msa1038990-mRNA-1
chr7_1 exon 76016768 76017139 76016768 ID=Msa1038990-mRNA-1:exon:19641;Parent=Msa1038990-mRNA-1
chr7_1 five_prime_UTR 76017104 76017139 76017104 ID=Msa1038990-mRNA-1:five_prime_utr;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76016768 76017103 76016768 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76014392 76014536 76014392 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76013807 76013909 76013807 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76013236 76013358 76013236 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76013051 76013148 76013051 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76012769 76012894 76012769 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76012598 76012667 76012598 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76012466 76012496 76012466 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76012244 76012365 76012244 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76011590 76011729 76011590 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76011320 76011512 76011320 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 CDS 76011111 76011234 76011111 ID=Msa1038990-mRNA-1:cds;Parent=Msa1038990-mRNA-1
chr7_1 three_prime_UTR 76010154 76011110 76010154 ID=Msa1038990-mRNA-1:three_prime_utr;Parent=Msa1038990-mRNA-1
Gene Sequence

>Msa1038990

ATGGTTGCTGGATCTGGGTGCTTGGTTTGGTTTGGGACTAATCACTCGTGCTCTAACAATATTTTTCCTTCATCTTTCGTCTCATCTACTTCCCAACAAAGATCAGTAGTACTGTCAATTTTTCCCCCTAAAAATAGAAATATGTCTCAACAACAGCTGAACCTGAGTTCTACCACAAACATAGATGTACAAATGGTGGATAATTCTCCTCCCATGACGCTTCCTAGCTTTAATGATTATCATCAGATAGATGACAAAGTTCTTGAAAACATTGTTTATGATGCTCTTGTCTTTGCCACTCTCAATGGTCTTCTTGTTGGGGATAAATCTGTTGAGGGTTGGTGCATCTCCCATTTTCCTTACTACCTCCCCCTCTTCCTGAAACTCATTGGAAACAAGCTTGTGATTTGGCACCTTTATTCAATGAACTTGTTGATCGTGTTAGCTTGGATGGAAAATTTCTCCAACAATCCCTCTCCAAATTACATGCTTGATGAAAAGACTAAGTCACTTTTGCAAATTGAGATGAACACTATTTCCACTTCATTTTCTGGTGTTGGTGTTGTTATGACTGAACTTCACAGGAACATACTTTCTCACTATGGAAAATTGCTTGGACTAGATTCCGAAAGGGTTCCTGTCAATACTGCCGACAGTCGGTATGCGGAGGCATTAGCTAAAGCTTGGAAGGAGTATAATAACCCTAGGGCTGTGATTATCGTTGTGGTTCAGGGTGAAGAACGAAACATGTATGACCAGCATTTTGTGTCTGCAATTCTAAGAGAGAAATATCCTTTTCTTAGTGCACATATTTGTGTTGTTAGTGTTTTTATCCTTAACTTTGTGACACGCATCATATTACAACCATACGGAAAACATTGGCGGAAATTAATCAAGAAGGAGAAATTCTGCCAGATGGAACACTTTCTGTGGATGGACAAGCAGTCGCAATCGTTTACTTCCGAGCTGGCTATACACCAGTTGACTATCCTTCGGAATCACTTTTTTCACTTGAAACTAACAAGATCTGATGAATGGAGAGCTAGGCTACTCATAGAACAATCTTCTGCTATCAAATGCCCTAACATATCTTATCATTTGGTTGGCACAAAAAAGATTCAACAGGAACTGGCAAGGCCCAATGTTCTTGAAAGGTTCTTTGAAAACAAAGAGGATATTGCGAAACTGCGTAAATGCTTTGCAGGGTTGTGGAGTTTGGAGGATTCAGATATTGTTAATGAAGCAATTGAGAAGCCAGAGTTATTTGTGATGAAACCCCAAAGAGAAGGAGGAGGAAACAATATTTATGGTGATGATCTTAGGGAGACCCTTAAAAGATTACAGAAACCAGGTTCTCAAGAAGATGCTGCTTACATACTTATGCAGAGGATATTTCCAGCTAACACGGCGTCAATTTTGATGCGTAATGGCTTCTTGCATAAAGATCATGTCATTTCAGAATTTGGGATATTCAGTACTTATTTAAGGAATAAGGATAAGGTTATTGTGAATAGTGAAAGTGGCTACATGGTACGTACAAAACCATCATTATCTGATGAAGGTGGGGTTTTGCCTGGTTTTGGAGTAATAGATAGTGTATACCTCACATGA
Protein sequence

>Msa1038990

MVAGSGCLVWFGTNHSCSNNIFPSSFVSSTSQQRSVVLSIFPPKNRNMSQQQLNLSSTTNIDVQMVDNSPPMTLPSFNDYHQIDDKVLENIVYDALVFATLNGLLVGDKSVEGWCISHFPYYLPLFLKLIGNKLVIWHLYSMNLLIVLAWMENFSNNPSPNYMLDEKTKSLLQIEMNTISTSFSGVGVVMTELHRNILSHYGKLLGLDSERVPVNTADSRYAEALAKAWKEYNNPRAVIIVVVQGEERNMYDQHFVSAILREKYPFLSAHICVVSVFILNFVTRIILQPYGKHWRKLIKKEKFCQMEHFLWMDKQSQSFTSELAIHQLTILRNHFFHLKLTRSDEWRARLLIEQSSAIKCPNISYHLVGTKKIQQELARPNVLERFFENKEDIAKLRKCFAGLWSLEDSDIVNEAIEKPELFVMKPQREGGGNNIYGDDLRETLKRLQKPGSQEDAAYILMQRIFPANTASILMRNGFLHKDHVISEFGIFSTYLRNKDKVIVNSESGYMVRTKPSLSDEGGVLPGFGVIDSVYLT*