Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071380 | XP_039682962.1 | 94.839 | 155 | 8 | 0 | 1 | 155 | 1 | 155 | 4.04e-96 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071380 | sp|Q54SW1|Y2179_DICDI | 28.169 | 142 | 96 | 3 | 5 | 142 | 1 | 140 | 7.97e-16 | 72.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071380 | I3SNQ8 | 96.296 | 135 | 5 | 0 | 21 | 155 | 22 | 156 | 3.51e-92 | 273 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0071380 | -0.806240 | 9.056660e-50 | -8.615850e-47 |
| Msa0002240 | Msa0071380 | -0.827168 | 1.815592e-54 | -8.615850e-47 |
| Msa0003890 | Msa0071380 | -0.817672 | 2.921076e-52 | -8.615850e-47 |
| Msa0006070 | Msa0071380 | -0.813143 | 2.971781e-51 | -8.615850e-47 |
| Msa0006110 | Msa0071380 | -0.842400 | 2.645917e-58 | -8.615850e-47 |
| Msa0011170 | Msa0071380 | -0.800123 | 1.670528e-48 | -8.615850e-47 |
| Msa0011660 | Msa0071380 | 0.837836 | 4.108112e-57 | -8.615850e-47 |
| Msa0017510 | Msa0071380 | -0.818148 | 2.280578e-52 | -8.615850e-47 |
| Msa0024210 | Msa0071380 | 0.810060 | 1.390621e-50 | -8.615850e-47 |
| Msa0044090 | Msa0071380 | -0.831171 | 1.941655e-55 | -8.615850e-47 |
| Msa0052730 | Msa0071380 | -0.806397 | 8.389506e-50 | -8.615850e-47 |
| Msa0054480 | Msa0071380 | -0.814357 | 1.605224e-51 | -8.615850e-47 |
| Msa0071380 | Msa0075470 | -0.861001 | 1.394270e-63 | -8.615850e-47 |
| Msa0071380 | Msa0090570 | -0.803215 | 3.877328e-49 | -8.615850e-47 |
| Msa0071380 | Msa0091210 | 0.801347 | 9.398280e-49 | -8.615850e-47 |
| Msa0071380 | Msa0104800 | -0.800452 | 1.432017e-48 | -8.615850e-47 |
| Msa0071380 | Msa0105070 | -0.815192 | 1.048745e-51 | -8.615850e-47 |
| Msa0071380 | Msa0120010 | 0.824915 | 6.229956e-54 | -8.615850e-47 |
| Msa0071380 | Msa0120020 | 0.825969 | 3.506580e-54 | -8.615850e-47 |
| Msa0071380 | Msa0127050 | -0.806240 | 9.053376e-50 | -8.615850e-47 |
| Msa0071380 | Msa0127800 | -0.809023 | 2.322876e-50 | -8.615850e-47 |
| Msa0071380 | Msa0157290 | -0.818814 | 1.610578e-52 | -8.615850e-47 |
| Msa0071380 | Msa0166560 | -0.800152 | 1.648219e-48 | -8.615850e-47 |
| Msa0071380 | Msa0178930 | -0.809356 | 1.970052e-50 | -8.615850e-47 |
| Msa0071380 | Msa0180500 | -0.816379 | 5.700553e-52 | -8.615850e-47 |
| Msa0071380 | Msa0183760 | -0.805395 | 1.362868e-49 | -8.615850e-47 |
| Msa0071380 | Msa0188150 | -0.803623 | 3.191497e-49 | -8.615850e-47 |
| Msa0071380 | Msa0205510 | -0.801605 | 8.320816e-49 | -8.615850e-47 |
| Msa0071380 | Msa0208090 | -0.809968 | 1.455232e-50 | -8.615850e-47 |
| Msa0071380 | Msa0212990 | -0.802675 | 5.014047e-49 | -8.615850e-47 |
| Msa0071380 | Msa0215320 | 0.839339 | 1.681518e-57 | -8.615850e-47 |
| Msa0071380 | Msa0242430 | -0.819632 | 1.048915e-52 | -8.615850e-47 |
| Msa0071380 | Msa0245940 | -0.814773 | 1.298838e-51 | -8.615850e-47 |
| Msa0071380 | Msa0264150 | -0.809611 | 1.737162e-50 | -8.615850e-47 |
| Msa0071380 | Msa0267370 | -0.812042 | 5.171823e-51 | -8.615850e-47 |
| Msa0071380 | Msa0271530 | -0.823004 | 1.749306e-53 | -8.615850e-47 |
| Msa0071380 | Msa0275000 | -0.811121 | 8.203655e-51 | -8.615850e-47 |
| Msa0071380 | Msa0276630 | -0.829146 | 6.060864e-55 | -8.615850e-47 |
| Msa0071380 | Msa0277180 | -0.801038 | 1.087210e-48 | -8.615850e-47 |
| Msa0071380 | Msa0279700 | -0.805557 | 1.260386e-49 | -8.615850e-47 |
| Msa0071380 | Msa0284520 | -0.818675 | 1.732226e-52 | -8.615850e-47 |
| Msa0071380 | Msa0285450 | -0.813731 | 2.206116e-51 | -8.615850e-47 |
| Msa0071380 | Msa0292030 | -0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa0071380 | Msa0294560 | 0.812822 | 3.493916e-51 | -8.615850e-47 |
| Msa0071380 | Msa0305190 | -0.804715 | 1.890937e-49 | -8.615850e-47 |
| Msa0071380 | Msa0316810 | -0.803746 | 3.008587e-49 | -8.615850e-47 |
| Msa0071380 | Msa0317520 | -0.825088 | 5.673074e-54 | -8.615850e-47 |
| Msa0071380 | Msa0319170 | -0.842690 | 2.217209e-58 | -8.615850e-47 |
| Msa0071380 | Msa0321310 | -0.820717 | 5.918860e-53 | -8.615850e-47 |
| Msa0071380 | Msa0330340 | -0.821530 | 3.844960e-53 | -8.615850e-47 |
| Msa0071380 | Msa0336320 | -0.809724 | 1.642546e-50 | -8.615850e-47 |
| Msa0071380 | Msa0356460 | -0.815756 | 7.853156e-52 | -8.615850e-47 |
| Msa0071380 | Msa0359030 | -0.830212 | 3.334489e-55 | -8.615850e-47 |
| Msa0071380 | Msa0381610 | 0.817643 | 2.964464e-52 | -8.615850e-47 |
| Msa0071380 | Msa0385840 | -0.805942 | 1.046470e-49 | -8.615850e-47 |
| Msa0071380 | Msa0389910 | -0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa0071380 | Msa0392510 | -0.803181 | 3.940368e-49 | -8.615850e-47 |
| Msa0071380 | Msa0402790 | -0.806255 | 8.988832e-50 | -8.615850e-47 |
| Msa0071380 | Msa0411390 | -0.806403 | 8.367499e-50 | -8.615850e-47 |
| Msa0071380 | Msa0411430 | -0.817018 | 4.099240e-52 | -8.615850e-47 |
| Msa0071380 | Msa0425790 | -0.816131 | 6.476439e-52 | -8.615850e-47 |
| Msa0071380 | Msa0426900 | -0.805665 | 1.196493e-49 | -8.615850e-47 |
| Msa0071380 | Msa0436490 | 0.800279 | 1.552681e-48 | -8.615850e-47 |
| Msa0071380 | Msa0436760 | -0.802049 | 6.746995e-49 | -8.615850e-47 |
| Msa0071380 | Msa0443260 | -0.813907 | 2.017878e-51 | -8.615850e-47 |
| Msa0071380 | Msa0444750 | 0.811311 | 7.461002e-51 | -8.615850e-47 |
| Msa0071380 | Msa0455760 | -0.817631 | 2.983913e-52 | -8.615850e-47 |
| Msa0071380 | Msa0467640 | 0.861836 | 7.751754e-64 | -8.615850e-47 |
| Msa0071380 | Msa0481530 | -0.805568 | 1.253922e-49 | -8.615850e-47 |
| Msa0071380 | Msa0490390 | -0.808122 | 3.616725e-50 | -8.615850e-47 |
| Msa0071380 | Msa0498650 | -0.821271 | 4.411111e-53 | -8.615850e-47 |
| Msa0071380 | Msa0512750 | -0.805117 | 1.558399e-49 | -8.615850e-47 |
| Msa0071380 | Msa0514070 | 0.856562 | 2.958941e-62 | -8.615850e-47 |
| Msa0071380 | Msa0521670 | -0.802506 | 5.432423e-49 | -8.615850e-47 |
| Msa0071380 | Msa0523940 | -0.814536 | 1.465520e-51 | -8.615850e-47 |
| Msa0071380 | Msa0529040 | -0.821335 | 4.264345e-53 | -8.615850e-47 |
| Msa0071380 | Msa0529890 | -0.826162 | 3.155556e-54 | -8.615850e-47 |
| Msa0071380 | Msa0531180 | -0.805711 | 1.169860e-49 | -8.615850e-47 |
| Msa0071380 | Msa0539530 | 0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa0071380 | Msa0540020 | -0.802590 | 5.219095e-49 | -8.615850e-47 |
| Msa0071380 | Msa0547320 | -0.844055 | 9.578515e-59 | -8.615850e-47 |
| Msa0071380 | Msa0548920 | -0.809259 | 2.067568e-50 | -8.615850e-47 |
| Msa0071380 | Msa0571130 | -0.830011 | 3.733451e-55 | -8.615850e-47 |
| Msa0071380 | Msa0585560 | -0.819730 | 9.961106e-53 | -8.615850e-47 |
| Msa0071380 | Msa0592440 | -0.828611 | 8.165597e-55 | -8.615850e-47 |
| Msa0071380 | Msa0601750 | -0.802320 | 5.933427e-49 | -8.615850e-47 |
| Msa0071380 | Msa0610430 | -0.801977 | 6.979107e-49 | -8.615850e-47 |
| Msa0071380 | Msa0610840 | 0.823438 | 1.385105e-53 | -8.615850e-47 |
| Msa0071380 | Msa0625720 | -0.823589 | 1.276830e-53 | -8.615850e-47 |
| Msa0071380 | Msa0627450 | -0.800869 | 1.177361e-48 | -8.615850e-47 |
| Msa0071380 | Msa0632740 | -0.818848 | 1.581870e-52 | -8.615850e-47 |
| Msa0071380 | Msa0643350 | -0.807339 | 5.305893e-50 | -8.615850e-47 |
| Msa0071380 | Msa0661650 | -0.815141 | 1.076400e-51 | -8.615850e-47 |
| Msa0071380 | Msa0663390 | -0.809667 | 1.689500e-50 | -8.615850e-47 |
| Msa0071380 | Msa0669320 | -0.812718 | 3.682240e-51 | -8.615850e-47 |
| Msa0071380 | Msa0679290 | 0.829418 | 5.205801e-55 | -8.615850e-47 |
| Msa0071380 | Msa0679710 | -0.801304 | 9.592475e-49 | -8.615850e-47 |
| Msa0071380 | Msa0681250 | -0.832266 | 1.042979e-55 | -8.615850e-47 |
| Msa0071380 | Msa0681270 | -0.836923 | 7.039505e-57 | -8.615850e-47 |
| Msa0071380 | Msa0683510 | -0.816134 | 6.467269e-52 | -8.615850e-47 |
| Msa0071380 | Msa0688070 | -0.802241 | 6.158449e-49 | -8.615850e-47 |
| Msa0071380 | Msa0692040 | 0.845034 | 5.223167e-59 | -8.615850e-47 |
| Msa0071380 | Msa0715470 | -0.805348 | 1.394381e-49 | -8.615850e-47 |
| Msa0071380 | Msa0715700 | -0.853828 | 1.846426e-61 | -8.615850e-47 |
| Msa0071380 | Msa0731940 | -0.825918 | 3.606459e-54 | -8.615850e-47 |
| Msa0071380 | Msa0735660 | -0.838819 | 2.292346e-57 | -8.615850e-47 |
| Msa0071380 | Msa0739280 | -0.811870 | 5.638835e-51 | -8.615850e-47 |
| Msa0071380 | Msa0743720 | -0.806680 | 7.311785e-50 | -8.615850e-47 |
| Msa0071380 | Msa0749290 | -0.832094 | 1.149856e-55 | -8.615850e-47 |
| Msa0071380 | Msa0749320 | -0.803472 | 3.430170e-49 | -8.615850e-47 |
| Msa0071380 | Msa0753720 | -0.810885 | 9.228315e-51 | -8.615850e-47 |
| Msa0071380 | Msa0756540 | -0.807767 | 4.304539e-50 | -8.615850e-47 |
| Msa0071380 | Msa0757450 | 0.809932 | 1.482079e-50 | -8.615850e-47 |
| Msa0071380 | Msa0757500 | 0.817226 | 3.679871e-52 | -8.615850e-47 |
| Msa0071380 | Msa0759690 | -0.815673 | 8.195897e-52 | -8.615850e-47 |
| Msa0071380 | Msa0762970 | -0.806320 | 8.712368e-50 | -8.615850e-47 |
| Msa0071380 | Msa0777570 | 0.836360 | 9.795031e-57 | -8.615850e-47 |
| Msa0071380 | Msa0793800 | -0.809642 | 1.710383e-50 | -8.615850e-47 |
| Msa0071380 | Msa0794730 | -0.800055 | 1.724570e-48 | -8.615850e-47 |
| Msa0071380 | Msa0808080 | -0.830096 | 3.560207e-55 | -8.615850e-47 |
| Msa0071380 | Msa0810220 | -0.819288 | 1.256334e-52 | -8.615850e-47 |
| Msa0071380 | Msa0816710 | -0.808683 | 2.745331e-50 | -8.615850e-47 |
| Msa0071380 | Msa0832340 | -0.828089 | 1.091193e-54 | -8.615850e-47 |
| Msa0071380 | Msa0843260 | -0.801543 | 8.569148e-49 | -8.615850e-47 |
| Msa0071380 | Msa0844490 | -0.820568 | 6.403473e-53 | -8.615850e-47 |
| Msa0071380 | Msa0844570 | -0.803748 | 3.006720e-49 | -8.615850e-47 |
| Msa0071380 | Msa0849030 | -0.837972 | 3.790890e-57 | -8.615850e-47 |
| Msa0071380 | Msa0861930 | -0.812902 | 3.355030e-51 | -8.615850e-47 |
| Msa0071380 | Msa0866410 | -0.803677 | 3.110433e-49 | -8.615850e-47 |
| Msa0071380 | Msa0868440 | -0.811806 | 5.823964e-51 | -8.615850e-47 |
| Msa0071380 | Msa0880140 | -0.813154 | 2.955293e-51 | -8.615850e-47 |
| Msa0071380 | Msa0897330 | -0.841990 | 3.397456e-58 | -8.615850e-47 |
| Msa0071380 | Msa0925250 | -0.816189 | 6.288077e-52 | -8.615850e-47 |
| Msa0071380 | Msa0925290 | -0.822228 | 2.650718e-53 | -8.615850e-47 |
| Msa0071380 | Msa0933100 | -0.852672 | 3.959129e-61 | -8.615850e-47 |
| Msa0071380 | Msa0936390 | -0.807238 | 5.574043e-50 | -8.615850e-47 |
| Msa0071380 | Msa0947660 | -0.816662 | 4.926651e-52 | -8.615850e-47 |
| Msa0071380 | Msa0953120 | -0.819852 | 9.341207e-53 | -8.615850e-47 |
| Msa0071380 | Msa0959360 | -0.818989 | 1.469645e-52 | -8.615850e-47 |
| Msa0071380 | Msa0963190 | -0.812178 | 4.831798e-51 | -8.615850e-47 |
| Msa0071380 | Msa0969520 | -0.827847 | 1.247508e-54 | -8.615850e-47 |
| Msa0071380 | Msa0969730 | -0.804846 | 1.775687e-49 | -8.615850e-47 |
| Msa0071380 | Msa0969810 | -0.823409 | 1.406675e-53 | -8.615850e-47 |
| Msa0071380 | Msa0974070 | -0.845741 | 3.360269e-59 | -8.615850e-47 |
| Msa0071380 | Msa0974080 | -0.811143 | 8.114554e-51 | -8.615850e-47 |
| Msa0071380 | Msa0976670 | -0.812800 | 3.532859e-51 | -8.615850e-47 |
| Msa0071380 | Msa1000900 | -0.812495 | 4.119242e-51 | -8.615850e-47 |
| Msa0071380 | Msa1003620 | -0.813654 | 2.294906e-51 | -8.615850e-47 |
| Msa0071380 | Msa1005880 | -0.813332 | 2.700550e-51 | -8.615850e-47 |
| Msa0071380 | Msa1014540 | -0.804143 | 2.488533e-49 | -8.615850e-47 |
| Msa0071380 | Msa1036410 | -0.800530 | 1.380497e-48 | -8.615850e-47 |
| Msa0071380 | Msa1036440 | -0.808406 | 3.145566e-50 | -8.615850e-47 |
| Msa0071380 | Msa1036610 | -0.816700 | 4.830729e-52 | -8.615850e-47 |
| Msa0071380 | Msa1036710 | 0.807476 | 4.962537e-50 | -8.615850e-47 |
| Msa0071380 | Msa1038990 | -0.804643 | 1.957645e-49 | -8.615850e-47 |
| Msa0071380 | Msa1046460 | -0.814708 | 1.342335e-51 | -8.615850e-47 |
| Msa0071380 | Msa1048160 | -0.821152 | 4.699678e-53 | -8.615850e-47 |
| Msa0071380 | Msa1051200 | -0.804485 | 2.111870e-49 | -8.615850e-47 |
| Msa0071380 | Msa1068870 | -0.811263 | 7.641565e-51 | -8.615850e-47 |
| Msa0071380 | Msa1075540 | -0.816944 | 4.259630e-52 | -8.615850e-47 |
| Msa0071380 | Msa1100050 | -0.827423 | 1.577533e-54 | -8.615850e-47 |
| Msa0071380 | Msa1109680 | -0.808617 | 2.835537e-50 | -8.615850e-47 |
| Msa0071380 | Msa1113170 | -0.844550 | 7.055268e-59 | -8.615850e-47 |
| Msa0071380 | Msa1118320 | -0.802422 | 5.654021e-49 | -8.615850e-47 |
| Msa0071380 | Msa1121490 | -0.807312 | 5.375676e-50 | -8.615850e-47 |
| Msa0071380 | Msa1123380 | -0.821194 | 4.597221e-53 | -8.615850e-47 |
| Msa0071380 | Msa1131220 | -0.801189 | 1.012418e-48 | -8.615850e-47 |
| Msa0071380 | Msa1135470 | -0.828907 | 6.926178e-55 | -8.615850e-47 |
| Msa0071380 | Msa1137570 | -0.849283 | 3.571814e-60 | -8.615850e-47 |
| Msa0071380 | Msa1144040 | -0.810952 | 8.925111e-51 | -8.615850e-47 |
| Msa0071380 | Msa1162780 | -0.817197 | 3.735489e-52 | -8.615850e-47 |
| Msa0071380 | Msa1167340 | -0.805034 | 1.622322e-49 | -8.615850e-47 |
| Msa0071380 | Msa1169550 | -0.813199 | 2.889004e-51 | -8.615850e-47 |
| Msa0071380 | Msa1173100 | -0.811626 | 6.371603e-51 | -8.615850e-47 |
| Msa0071380 | Msa1181250 | -0.811396 | 7.148172e-51 | -8.615850e-47 |
| Msa0071380 | Msa1181330 | -0.802962 | 4.373480e-49 | -8.615850e-47 |
| Msa0071380 | Msa1190920 | -0.808648 | 2.793042e-50 | -8.615850e-47 |
| Msa0071380 | Msa1193290 | -0.837257 | 5.783020e-57 | -8.615850e-47 |
| Msa0071380 | Msa1199220 | -0.813681 | 2.262727e-51 | -8.615850e-47 |
| Msa0071380 | Msa1211140 | 0.805876 | 1.080120e-49 | -8.615850e-47 |
| Msa0071380 | Msa1224480 | -0.803143 | 4.012250e-49 | -8.615850e-47 |
| Msa0071380 | Msa1232740 | -0.804388 | 2.212854e-49 | -8.615850e-47 |
| Msa0071380 | Msa1235740 | -0.801425 | 9.058475e-49 | -8.615850e-47 |
| Msa0071380 | Msa1237980 | -0.811946 | 5.427447e-51 | -8.615850e-47 |
| Msa0071380 | Msa1238930 | -0.802590 | 5.220305e-49 | -8.615850e-47 |
| Msa0071380 | Msa1253020 | -0.824762 | 6.770921e-54 | -8.615850e-47 |
| Msa0071380 | Msa1254730 | -0.821826 | 3.285077e-53 | -8.615850e-47 |
| Msa0071380 | Msa1274520 | -0.808503 | 3.000344e-50 | -8.615850e-47 |
| Msa0071380 | Msa1277660 | -0.826090 | 3.282055e-54 | -8.615850e-47 |
| Msa0071380 | Msa1282580 | 0.803069 | 4.156790e-49 | -8.615850e-47 |
| Msa0071380 | Msa1284680 | -0.817387 | 3.386390e-52 | -8.615850e-47 |
| Msa0071380 | Msa1286800 | -0.814989 | 1.163096e-51 | -8.615850e-47 |
| Msa0071380 | Msa1294820 | -0.811484 | 6.840838e-51 | -8.615850e-47 |
| Msa0071380 | Msa1299290 | 0.800054 | 1.725587e-48 | -8.615850e-47 |
| Msa0071380 | Msa1299950 | -0.802411 | 5.681453e-49 | -8.615850e-47 |
| Msa0071380 | Msa1313320 | -0.805458 | 1.321813e-49 | -8.615850e-47 |
| Msa0071380 | Msa1327680 | -0.807458 | 5.006058e-50 | -8.615850e-47 |
| Msa0071380 | Msa1332040 | 0.802570 | 5.269275e-49 | -8.615850e-47 |
| Msa0071380 | Msa1336670 | -0.804812 | 1.804912e-49 | -8.615850e-47 |
| Msa0071380 | Msa1346370 | -0.803859 | 2.850523e-49 | -8.615850e-47 |
| Msa0071380 | Msa1349520 | -0.811822 | 5.776366e-51 | -8.615850e-47 |
| Msa0071380 | Msa1352760 | -0.847428 | 1.163543e-59 | -8.615850e-47 |
| Msa0071380 | Msa1353470 | -0.824816 | 6.574380e-54 | -8.615850e-47 |
| Msa0071380 | Msa1359040 | -0.810081 | 1.376497e-50 | -8.615850e-47 |
| Msa0071380 | Msa1365600 | -0.802734 | 4.875393e-49 | -8.615850e-47 |
| Msa0071380 | Msa1370070 | 0.828730 | 7.641155e-55 | -8.615850e-47 |
| Msa0071380 | Msa1374470 | -0.805282 | 1.439476e-49 | -8.615850e-47 |
| Msa0071380 | Msa1379500 | -0.804737 | 1.871135e-49 | -8.615850e-47 |
| Msa0071380 | Msa1392780 | -0.820138 | 8.036973e-53 | -8.615850e-47 |
| Msa0071380 | Msa1409880 | -0.811827 | 5.761177e-51 | -8.615850e-47 |
| Msa0071380 | Msa1415910 | -0.810374 | 1.190119e-50 | -8.615850e-47 |
| Msa0071380 | Msa1449340 | 0.801399 | 9.172188e-49 | -8.615850e-47 |
| Msa0071380 | Msa1454570 | -0.805403 | 1.357907e-49 | -8.615850e-47 |
| Msa0071380 | Msa1459270 | -0.825412 | 4.755536e-54 | -8.615850e-47 |
| Msa0071380 | Msa1460830 | -0.803629 | 3.181478e-49 | -8.615850e-47 |
| Msa0071380 | Msa1461300 | -0.810622 | 1.051639e-50 | -8.615850e-47 |
| Msa0071380 | Msa1466540 | -0.852147 | 5.587211e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071380 | MtrunA17_Chr1g0176931 | 96.296 | 135 | 5 | 0 | 21 | 155 | 22 | 156 | 6.76e-96 | 273 |
| Msa0071380 | MtrunA17_Chr1g0176921 | 80.000 | 155 | 31 | 0 | 1 | 155 | 1 | 155 | 3.01e-83 | 241 |
| Msa0071380 | MtrunA17_Chr4g0025381 | 56.000 | 125 | 55 | 0 | 31 | 155 | 30 | 154 | 2.64e-44 | 143 |
| Msa0071380 | MtrunA17_Chr5g0439431 | 37.956 | 137 | 83 | 1 | 21 | 155 | 26 | 162 | 2.03e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071380 | AT3G11780.1 | 63.194 | 144 | 53 | 0 | 12 | 155 | 10 | 153 | 3.01e-69 | 206 |
| Msa0071380 | AT3G11780.2 | 56.173 | 162 | 53 | 1 | 12 | 155 | 10 | 171 | 8.62e-65 | 196 |
| Msa0071380 | AT5G06480.1 | 66.923 | 130 | 43 | 0 | 26 | 155 | 24 | 153 | 5.71e-64 | 193 |
| Msa0071380 | AT3G44100.1 | 48.175 | 137 | 69 | 2 | 16 | 152 | 15 | 149 | 1.63e-39 | 131 |
Find 45 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAATCACCAACCGAAAT+AGG | 0.176755 | 1_2:+43214441 | None:intergenic |
| ACTAGGAACTCGATATTATA+AGG | 0.266095 | 1_2:+43212745 | None:intergenic |
| ATGTTCAGATGCATATAAAT+TGG | 0.269141 | 1_2:-43212788 | Msa0071380:three_prime_UTR |
| GGCTATGATGTTCAAGTTAA+AGG | 0.294771 | 1_2:-43215050 | Msa0071380:CDS |
| GCTGATATCTAATTGCTAAT+TGG | 0.315728 | 1_2:-43212823 | Msa0071380:exon |
| TGAAAAGAATAAGAAGAGTT+TGG | 0.337784 | 1_2:+43216099 | None:intergenic |
| GTGGTTGATGTGTCGTATTT+TGG | 0.341756 | 1_2:-43214513 | Msa0071380:CDS |
| AGAATCATCTTGCCCTATTT+CGG | 0.351220 | 1_2:-43214454 | Msa0071380:CDS |
| TGGCCTCTTGCAACGGGCTC+AGG | 0.355000 | 1_2:+43215014 | None:intergenic |
| ATTACTTGTAGTTGCAGAAA+TGG | 0.376462 | 1_2:+43214977 | None:intergenic |
| CAAAATCACCAACCGAAATA+GGG | 0.409253 | 1_2:+43214442 | None:intergenic |
| GCAGGCTGGCCTCTTGCAAC+GGG | 0.412012 | 1_2:+43215008 | None:intergenic |
| GAGTTGACTTGCATTACATT+TGG | 0.422988 | 1_2:-43212874 | Msa0071380:CDS |
| AATCTCTTCAAAACAAAACT+TGG | 0.437835 | 1_2:-43216162 | Msa0071380:five_prime_UTR |
| AGCAGGCTGGCCTCTTGCAA+CGG | 0.452618 | 1_2:+43215007 | None:intergenic |
| TATTATCTTACTATACTATG+AGG | 0.476521 | 1_2:-43212578 | Msa0071380:three_prime_UTR |
| AGTGAGACCCATGACCTTTG+TGG | 0.480719 | 1_2:-43214477 | Msa0071380:CDS |
| ATGATTCTCCACAAAGGTCA+TGG | 0.491107 | 1_2:+43214469 | None:intergenic |
| TCATCATAATCCAGCACGAC+TGG | 0.513392 | 1_2:-43212721 | Msa0071380:three_prime_UTR |
| TTGAAGATGAAGCTGTATGA+TGG | 0.520552 | 1_2:-43212907 | Msa0071380:CDS |
| CTAGGAACTCGATATTATAA+GGG | 0.522369 | 1_2:+43212746 | None:intergenic |
| TCATCTTGCCCTATTTCGGT+TGG | 0.527245 | 1_2:-43214450 | Msa0071380:CDS |
| GATAATAGACATATATAGAC+TGG | 0.536744 | 1_2:+43212594 | None:intergenic |
| AATCAACATACCAGTCGTGC+TGG | 0.537940 | 1_2:+43212711 | None:intergenic |
| CATGTCACAGGTAAGAAAGA+TGG | 0.543834 | 1_2:-43215071 | Msa0071380:intron |
| TCTCCATCGTTTCTCAAGGG+AGG | 0.555824 | 1_2:+43216137 | None:intergenic |
| GCAGAAATGGTGAATGTAGC+AGG | 0.564150 | 1_2:+43214990 | None:intergenic |
| CTTACAGGTGGGGTGTATGC+AGG | 0.566295 | 1_2:+43214396 | None:intergenic |
| TGCTGGATTATGATGATACT+AGG | 0.566748 | 1_2:+43212728 | None:intergenic |
| ATAGACATATATAGACTGGC+TGG | 0.567658 | 1_2:+43212598 | None:intergenic |
| GCCACCGATGTTCACTATTG+CGG | 0.568515 | 1_2:-43216046 | Msa0071380:intron |
| TCTCCTGAGCCCGTTGCAAG+AGG | 0.575410 | 1_2:-43215017 | Msa0071380:CDS |
| TGATTCTCCACAAAGGTCAT+GGG | 0.579839 | 1_2:+43214470 | None:intergenic |
| TCAGGTCAAGCATTATCAGA+AGG | 0.588195 | 1_2:-43214543 | Msa0071380:intron |
| GATCCTCCCTTGAGAAACGA+TGG | 0.588700 | 1_2:-43216140 | Msa0071380:exon |
| AAATGGTGAATGTAGCAGGC+TGG | 0.595213 | 1_2:+43214994 | None:intergenic |
| CAGGTCAAGCATTATCAGAA+GGG | 0.612990 | 1_2:-43214542 | Msa0071380:CDS |
| ATAGTGAACATCGGTGGCGT+CGG | 0.635936 | 1_2:+43216051 | None:intergenic |
| ATTATCTTACTATACTATGA+GGG | 0.642472 | 1_2:-43212577 | Msa0071380:three_prime_UTR |
| ATTATCAGAAGGGAAACTAG+TGG | 0.674625 | 1_2:-43214532 | Msa0071380:CDS |
| GGCAAGATGATTCTCCACAA+AGG | 0.677071 | 1_2:+43214463 | None:intergenic |
| CAATTAGATATCAGCCACAG+AGG | 0.690807 | 1_2:+43212831 | None:intergenic |
| ACCGCAATAGTGAACATCGG+TGG | 0.695945 | 1_2:+43216045 | None:intergenic |
| ATAGCAACGACTTACAGGTG+GGG | 0.696202 | 1_2:+43214386 | None:intergenic |
| AAAACCGCAATAGTGAACAT+CGG | 0.700134 | 1_2:+43216042 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTTATTTGTTTTTATT+TGG | - | chr1_2:43212948-43212967 | Msa0071380:intron | 10.0% |
| !! | ATTATTCAAATATTAATTAC+CGG | - | chr1_2:43213067-43213086 | Msa0071380:intron | 10.0% |
| !!! | AAAAAAATATACACAAATTT+TGG | - | chr1_2:43213199-43213218 | Msa0071380:intron | 10.0% |
| !! | TAAATTAAATTATATCTGTT+TGG | + | chr1_2:43213646-43213665 | None:intergenic | 10.0% |
| !!! | ATCTAATTTTAAAAAACAAA+AGG | + | chr1_2:43213894-43213913 | None:intergenic | 10.0% |
| !! | AAAAAATAATGAGAAAGAAA+AGG | + | chr1_2:43212790-43212809 | None:intergenic | 15.0% |
| !!! | AATTATTGATTAATTCAACT+CGG | + | chr1_2:43212985-43213004 | None:intergenic | 15.0% |
| !!! | TATTTGCTTATGAAATTTTT+TGG | - | chr1_2:43213022-43213041 | Msa0071380:intron | 15.0% |
| !!! | ATTTGCTTATGAAATTTTTT+GGG | - | chr1_2:43213023-43213042 | Msa0071380:intron | 15.0% |
| !! | TATTTGAATAATTGCAATTA+CGG | + | chr1_2:43213059-43213078 | None:intergenic | 15.0% |
| !! | ATATGAATAATTCAAAATAC+AGG | - | chr1_2:43213293-43213312 | Msa0071380:intron | 15.0% |
| !! | AACTTATACTATTAATTGAA+GGG | + | chr1_2:43213397-43213416 | None:intergenic | 15.0% |
| !! | AAACTTATACTATTAATTGA+AGG | + | chr1_2:43213398-43213417 | None:intergenic | 15.0% |
| !! | ATTATATCAATATTATGTAG+CGG | + | chr1_2:43214060-43214079 | None:intergenic | 15.0% |
| !! | TAAAGATTCAAAATACATTA+AGG | - | chr1_2:43214888-43214907 | Msa0071380:intron | 15.0% |
| !! | CAAATAAACATTGAATATTC+AGG | + | chr1_2:43212940-43212959 | None:intergenic | 20.0% |
| !!! | TATTTGCTTATGAAATTTTC+CGG | + | chr1_2:43213089-43213108 | None:intergenic | 20.0% |
| !! | GCAAATAATTAATCTTAGTT+TGG | - | chr1_2:43213102-43213121 | Msa0071380:intron | 20.0% |
| !!! | TTTACCCTATTAAATTCTTT+TGG | - | chr1_2:43213234-43213253 | Msa0071380:intron | 20.0% |
| !!! | TTACCCTATTAAATTCTTTT+GGG | - | chr1_2:43213235-43213254 | Msa0071380:intron | 20.0% |
| !! | CATAAAAGATAATTAGGTAA+TGG | + | chr1_2:43213708-43213727 | None:intergenic | 20.0% |
| !! | GACATACATAAAAGATAATT+AGG | + | chr1_2:43213714-43213733 | None:intergenic | 20.0% |
| !!! | TATATCTATTTTCATGCATT+TGG | - | chr1_2:43213917-43213936 | Msa0071380:intron | 20.0% |
| !! | AAAAAGGTAAAATATAGTAC+AGG | + | chr1_2:43213965-43213984 | None:intergenic | 20.0% |
| !! | TATTATTCTATGATAGAATG+TGG | + | chr1_2:43214095-43214114 | None:intergenic | 20.0% |
| !!! | TTAAAAGTTGAATTAGGTTT+TGG | - | chr1_2:43215398-43215417 | Msa0071380:intron | 20.0% |
| !! | TATAAATTAGAGGATACAAT+TGG | + | chr1_2:43215554-43215573 | None:intergenic | 20.0% |
| !! | ATGCATATAGTATAAATTAG+AGG | + | chr1_2:43215564-43215583 | None:intergenic | 20.0% |
| !!! | TGGTTATTTCACATAAATTA+AGG | + | chr1_2:43215699-43215718 | None:intergenic | 20.0% |
| !! | TATTATCTTACTATACTATG+AGG | - | chr1_2:43216226-43216245 | Msa0071380:five_prime_UTR | 20.0% |
| !! | ATTATCTTACTATACTATGA+GGG | - | chr1_2:43216227-43216246 | Msa0071380:five_prime_UTR | 20.0% |
| ! | AATCTCTTCAAAACAAAACT+TGG | - | chr1_2:43212642-43212661 | Msa0071380:three_prime_UTR | 25.0% |
| ! | TGAAAAGAATAAGAAGAGTT+TGG | + | chr1_2:43212708-43212727 | None:intergenic | 25.0% |
| !! | TACCCTATTAAATTCTTTTG+GGG | - | chr1_2:43213236-43213255 | Msa0071380:intron | 25.0% |
| !! | TCCAAAAATAGCTTTTGTAA+AGG | - | chr1_2:43213264-43213283 | Msa0071380:intron | 25.0% |
| !! | CCAAAAATAGCTTTTGTAAA+GGG | - | chr1_2:43213265-43213284 | Msa0071380:intron | 25.0% |
| ! | AATAATTCAAAATACAGGTG+TGG | - | chr1_2:43213298-43213317 | Msa0071380:intron | 25.0% |
| !!! | AACTGTGTATTTTATTTCAC+AGG | - | chr1_2:43213322-43213341 | Msa0071380:intron | 25.0% |
| ! | TAAAATAACCCCTGTAATTT+GGG | + | chr1_2:43213366-43213385 | None:intergenic | 25.0% |
| ! | TAAACATTAATTACCATGCT+CGG | + | chr1_2:43213999-43214018 | None:intergenic | 25.0% |
| ! | ATTATGTGTAGAAATAGATG+AGG | - | chr1_2:43214185-43214204 | Msa0071380:intron | 25.0% |
| ! | CTAGTACAAATTTGCATTAT+TGG | - | chr1_2:43214515-43214534 | Msa0071380:CDS | 25.0% |
| ! | AATGACATAACACAAAGTAT+TGG | + | chr1_2:43214546-43214565 | None:intergenic | 25.0% |
| !! | TTATGTCATTTAGATATCCT+AGG | - | chr1_2:43214556-43214575 | Msa0071380:intron | 25.0% |
| !! | TTTTACAATGATTTGAGCAT+TGG | - | chr1_2:43214686-43214705 | Msa0071380:intron | 25.0% |
| ! | ATTCAAAGAGAAGATACAAA+GGG | - | chr1_2:43214932-43214951 | Msa0071380:intron | 25.0% |
| !! | CTTGTTAATAGTTGTTATTC+TGG | + | chr1_2:43215077-43215096 | None:intergenic | 25.0% |
| ! | TTATGTATCTGTGAATAAAG+GGG | + | chr1_2:43215164-43215183 | None:intergenic | 25.0% |
| ! | CTTATGTATCTGTGAATAAA+GGG | + | chr1_2:43215165-43215184 | None:intergenic | 25.0% |
| ! | ACTTATGTATCTGTGAATAA+AGG | + | chr1_2:43215166-43215185 | None:intergenic | 25.0% |
| ! | ATCATTTCTACATTGGAAAA+AGG | + | chr1_2:43215193-43215212 | None:intergenic | 25.0% |
| !! | ATTTGTCAATATAGCATTGA+GGG | + | chr1_2:43215301-43215320 | None:intergenic | 25.0% |
| ! | AATTTGTCAATATAGCATTG+AGG | + | chr1_2:43215302-43215321 | None:intergenic | 25.0% |
| ! | AAAATGGAAGATATTGAGTT+GGG | + | chr1_2:43215591-43215610 | None:intergenic | 25.0% |
| ! | AAATCAACCTTATCAAGTAT+TGG | + | chr1_2:43215638-43215657 | None:intergenic | 25.0% |
| !! | AATACTTGATAAGGTTGATT+TGG | - | chr1_2:43215637-43215656 | Msa0071380:intron | 25.0% |
| ! | AGACTAGCATTAAACAAAAA+AGG | + | chr1_2:43215815-43215834 | None:intergenic | 25.0% |
| !!! | ATTACATTTGGTTTTGATGT+TGG | - | chr1_2:43215942-43215961 | Msa0071380:intron | 25.0% |
| !!! | TTACATTTGGTTTTGATGTT+GGG | - | chr1_2:43215943-43215962 | Msa0071380:intron | 25.0% |
| ! | ATGTTCAGATGCATATAAAT+TGG | - | chr1_2:43216016-43216035 | Msa0071380:intron | 25.0% |
| ! | GATAATAGACATATATAGAC+TGG | + | chr1_2:43216213-43216232 | None:intergenic | 25.0% |
| TCATCTTCTGTTCAATATTG+CGG | - | chr1_2:43212841-43212860 | Msa0071380:CDS | 30.0% | |
| CTCCCCAAAAGAATTTAATA+GGG | + | chr1_2:43213241-43213260 | None:intergenic | 30.0% | |
| TCTCCCCAAAAGAATTTAAT+AGG | + | chr1_2:43213242-43213261 | None:intergenic | 30.0% | |
| !! | CCCTTTACAAAAGCTATTTT+TGG | + | chr1_2:43213268-43213287 | None:intergenic | 30.0% |
| CTAAAATAACCCCTGTAATT+TGG | + | chr1_2:43213367-43213386 | None:intergenic | 30.0% | |
| !! | CAAATTACAGGGGTTATTTT+AGG | - | chr1_2:43213365-43213384 | Msa0071380:intron | 30.0% |
| CACAAAACTTATGTCAAACT+AGG | + | chr1_2:43213499-43213518 | None:intergenic | 30.0% | |
| TTTGACGAACCTAATAAAAC+AGG | - | chr1_2:43213526-43213545 | Msa0071380:intron | 30.0% | |
| !! | CTGTCATAACCTGTTTTATT+AGG | + | chr1_2:43213538-43213557 | None:intergenic | 30.0% |
| ! | TTTTATGTATGTCATGTCAC+AGG | - | chr1_2:43213721-43213740 | Msa0071380:intron | 30.0% |
| ATTACTTGTAGTTGCAGAAA+TGG | + | chr1_2:43213830-43213849 | None:intergenic | 30.0% | |
| ! | TGATTGGATTAGAGAAAAGA+AGG | + | chr1_2:43214232-43214251 | None:intergenic | 30.0% |
| ! | ACACGAACACATTTTATTCA+AGG | + | chr1_2:43214454-43214473 | None:intergenic | 30.0% |
| TCATTTAGATATCCTAGGAA+AGG | - | chr1_2:43214561-43214580 | Msa0071380:intron | 30.0% | |
| CATTTAGATATCCTAGGAAA+GGG | - | chr1_2:43214562-43214581 | Msa0071380:intron | 30.0% | |
| ! | ATTGGAGTGTTAAGTCAATA+TGG | - | chr1_2:43214704-43214723 | Msa0071380:intron | 30.0% |
| GTGTTAAGTCAATATGGTTA+AGG | - | chr1_2:43214710-43214729 | Msa0071380:intron | 30.0% | |
| GTTAAGGTGAAATTTGTAGT+TGG | - | chr1_2:43214726-43214745 | Msa0071380:intron | 30.0% | |
| !! | TATTAGGTCTGCTTAGTTTT+GGG | + | chr1_2:43214843-43214862 | None:intergenic | 30.0% |
| ! | TTATTAGGTCTGCTTAGTTT+TGG | + | chr1_2:43214844-43214863 | None:intergenic | 30.0% |
| GAATTGTTCTCTTGGTTATT+AGG | + | chr1_2:43214859-43214878 | None:intergenic | 30.0% | |
| TCTAGTTAGAATTGTTCTCT+TGG | + | chr1_2:43214867-43214886 | None:intergenic | 30.0% | |
| GATTCAAAGAGAAGATACAA+AGG | - | chr1_2:43214931-43214950 | Msa0071380:intron | 30.0% | |
| ATATGACAAACATGTACACA+AGG | - | chr1_2:43214964-43214983 | Msa0071380:intron | 30.0% | |
| TGGAACTATCATTTCTACAT+TGG | + | chr1_2:43215200-43215219 | None:intergenic | 30.0% | |
| ! | TTTGTCAATATAGCATTGAG+GGG | + | chr1_2:43215300-43215319 | None:intergenic | 30.0% |
| AGCGGTTTAAAAGTTGAATT+AGG | - | chr1_2:43215392-43215411 | Msa0071380:intron | 30.0% | |
| ! | GACAAGAATTGATAACACAA+AGG | + | chr1_2:43215440-43215459 | None:intergenic | 30.0% |
| CAAAATGGAAGATATTGAGT+TGG | + | chr1_2:43215592-43215611 | None:intergenic | 30.0% | |
| CCAATGTCATAAATGCAAAA+TGG | + | chr1_2:43215607-43215626 | None:intergenic | 30.0% | |
| ! | CCATTTTGCATTTATGACAT+TGG | - | chr1_2:43215604-43215623 | Msa0071380:intron | 30.0% |
| GAATACACCAATACTTGATA+AGG | - | chr1_2:43215628-43215647 | Msa0071380:intron | 30.0% | |
| !! | TTTTAAGTGTTTGTTTGCAC+TGG | - | chr1_2:43215749-43215768 | Msa0071380:intron | 30.0% |
| GCTGATATCTAATTGCTAAT+TGG | - | chr1_2:43215981-43216000 | Msa0071380:intron | 30.0% | |
| CTAGGAACTCGATATTATAA+GGG | + | chr1_2:43216061-43216080 | None:intergenic | 30.0% | |
| ACTAGGAACTCGATATTATA+AGG | + | chr1_2:43216062-43216081 | None:intergenic | 30.0% | |
| ! | TTCTATTTTGTAATCTCAGC+AGG | + | chr1_2:43216143-43216162 | None:intergenic | 30.0% |
| ! | TTTTCTCCATCGTTTCTCAA+GGG | + | chr1_2:43212673-43212692 | None:intergenic | 35.0% |
| ! | TTTTTCTCCATCGTTTCTCA+AGG | + | chr1_2:43212674-43212693 | None:intergenic | 35.0% |
| AAAACCGCAATAGTGAACAT+CGG | + | chr1_2:43212765-43212784 | None:intergenic | 35.0% | |
| GTCACATATACCGTGTAATT+TGG | - | chr1_2:43213149-43213168 | Msa0071380:intron | 35.0% | |
| !! | TATTTCACAGGTGCTATTTC+TGG | - | chr1_2:43213334-43213353 | Msa0071380:intron | 35.0% |
| ! | GGCTATGATGTTCAAGTTAA+AGG | - | chr1_2:43213754-43213773 | Msa0071380:intron | 35.0% |
| CTCGGAACAAACACTTAAAA+AGG | + | chr1_2:43213981-43214000 | None:intergenic | 35.0% | |
| ATAGCAGCACTATAACACAA+CGG | + | chr1_2:43214146-43214165 | None:intergenic | 35.0% | |
| ATCCAATCATTTCATGACTC+AGG | - | chr1_2:43214243-43214262 | Msa0071380:intron | 35.0% | |
| ATTATCAGAAGGGAAACTAG+TGG | - | chr1_2:43214272-43214291 | Msa0071380:intron | 35.0% | |
| !! | TTGATGTGTCGTATTTTGGA+TGG | - | chr1_2:43214295-43214314 | Msa0071380:intron | 35.0% |
| AGAATCATCTTGCCCTATTT+CGG | - | chr1_2:43214350-43214369 | Msa0071380:intron | 35.0% | |
| CAAAATCACCAACCGAAATA+GGG | + | chr1_2:43214365-43214384 | None:intergenic | 35.0% | |
| ACAAAATCACCAACCGAAAT+AGG | + | chr1_2:43214366-43214385 | None:intergenic | 35.0% | |
| AACTTATAGCAACGACTTAC+AGG | + | chr1_2:43214426-43214445 | None:intergenic | 35.0% | |
| !!! | TGCTTGTAGTTTTTGGCAAT+AGG | - | chr1_2:43214475-43214494 | Msa0071380:CDS | 35.0% |
| TAATGTCGTCTTATCTGTCT+TGG | - | chr1_2:43214605-43214624 | Msa0071380:intron | 35.0% | |
| ! | GTAACCTTTGTGTTGGTATA+TGG | - | chr1_2:43214809-43214828 | Msa0071380:intron | 35.0% |
| CTTTCCATATACCAACACAA+AGG | + | chr1_2:43214816-43214835 | None:intergenic | 35.0% | |
| CCTTTAAATTATAGCCCTCA+AGG | + | chr1_2:43215040-43215059 | None:intergenic | 35.0% | |
| CCTTGAGGGCTATAATTTAA+AGG | - | chr1_2:43215037-43215056 | Msa0071380:CDS | 35.0% | |
| !! | AAAGGGGAGTTTGTTAGAAA+TGG | + | chr1_2:43215148-43215167 | None:intergenic | 35.0% |
| !! | TTCCACCGTTTGAGATTTTA+GGG | - | chr1_2:43215215-43215234 | Msa0071380:intron | 35.0% |
| CTAGACCCTAAAATCTCAAA+CGG | + | chr1_2:43215223-43215242 | None:intergenic | 35.0% | |
| !!! | GATTTTAGGGTCTAGGTTTT+TGG | - | chr1_2:43215228-43215247 | Msa0071380:intron | 35.0% |
| ! | CAACTTTTAAACCGCTTGAA+GGG | + | chr1_2:43215388-43215407 | None:intergenic | 35.0% |
| ! | TCAACTTTTAAACCGCTTGA+AGG | + | chr1_2:43215389-43215408 | None:intergenic | 35.0% |
| TTACCATCTGTTGTAATTGC+AGG | - | chr1_2:43215863-43215882 | Msa0071380:intron | 35.0% | |
| TACCATCTGTTGTAATTGCA+GGG | - | chr1_2:43215864-43215883 | Msa0071380:intron | 35.0% | |
| TTGAAGATGAAGCTGTATGA+TGG | - | chr1_2:43215897-43215916 | Msa0071380:intron | 35.0% | |
| !! | GAGTTGACTTGCATTACATT+TGG | - | chr1_2:43215930-43215949 | Msa0071380:intron | 35.0% |
| TGCTGGATTATGATGATACT+AGG | + | chr1_2:43216079-43216098 | None:intergenic | 35.0% | |
| ATAGACATATATAGACTGGC+TGG | + | chr1_2:43216209-43216228 | None:intergenic | 35.0% | |
| TATACCGTGTAATTTGGACG+AGG | - | chr1_2:43213155-43213174 | Msa0071380:intron | 40.0% | |
| TAGACCTCGTCCAAATTACA+CGG | + | chr1_2:43213162-43213181 | None:intergenic | 40.0% | |
| TGTGCAAAAATGTGCTTGCT+AGG | - | chr1_2:43213473-43213492 | Msa0071380:intron | 40.0% | |
| CATGTCACAGGTAAGAAAGA+TGG | - | chr1_2:43213733-43213752 | Msa0071380:intron | 40.0% | |
| TTAAGTGTTTGTTCCGAGCA+TGG | - | chr1_2:43213983-43214002 | Msa0071380:intron | 40.0% | |
| ! | GTTGTGTTATAGTGCTGCTA+TGG | - | chr1_2:43214145-43214164 | Msa0071380:intron | 40.0% |
| CATAATGCAACACCGAATAG+CGG | + | chr1_2:43214171-43214190 | None:intergenic | 40.0% | |
| GACCTGAGTCATGAAATGAT+TGG | + | chr1_2:43214248-43214267 | None:intergenic | 40.0% | |
| TCAGGTCAAGCATTATCAGA+AGG | - | chr1_2:43214261-43214280 | Msa0071380:intron | 40.0% | |
| CAGGTCAAGCATTATCAGAA+GGG | - | chr1_2:43214262-43214281 | Msa0071380:intron | 40.0% | |
| !! | GTGGTTGATGTGTCGTATTT+TGG | - | chr1_2:43214291-43214310 | Msa0071380:intron | 40.0% |
| TGATTCTCCACAAAGGTCAT+GGG | + | chr1_2:43214337-43214356 | None:intergenic | 40.0% | |
| ATGATTCTCCACAAAGGTCA+TGG | + | chr1_2:43214338-43214357 | None:intergenic | 40.0% | |
| TATAGCAACGACTTACAGGT+GGG | + | chr1_2:43214422-43214441 | None:intergenic | 40.0% | |
| TTATAGCAACGACTTACAGG+TGG | + | chr1_2:43214423-43214442 | None:intergenic | 40.0% | |
| ! | TCGTGTGTGCTTGTAGTTTT+TGG | - | chr1_2:43214468-43214487 | Msa0071380:CDS | 40.0% |
| ACTGCTAGTAACCTTTGTGT+TGG | - | chr1_2:43214802-43214821 | Msa0071380:intron | 40.0% | |
| CTCTAGTGTGAAAGTCTTTG+GGG | + | chr1_2:43214993-43215012 | None:intergenic | 40.0% | |
| GCTCTAGTGTGAAAGTCTTT+GGG | + | chr1_2:43214994-43215013 | None:intergenic | 40.0% | |
| TGCTCTAGTGTGAAAGTCTT+TGG | + | chr1_2:43214995-43215014 | None:intergenic | 40.0% | |
| TTATAGCCCTCAAGGATAGA+GGG | + | chr1_2:43215032-43215051 | None:intergenic | 40.0% | |
| ATTATAGCCCTCAAGGATAG+AGG | + | chr1_2:43215033-43215052 | None:intergenic | 40.0% | |
| !! | GTTCCACCGTTTGAGATTTT+AGG | - | chr1_2:43215214-43215233 | Msa0071380:intron | 40.0% |
| !!! | CGTTTGAGATTTTAGGGTCT+AGG | - | chr1_2:43215221-43215240 | Msa0071380:intron | 40.0% |
| GATTCATCTTTCCCTTCAAG+CGG | - | chr1_2:43215374-43215393 | Msa0071380:intron | 40.0% | |
| ACCAAATGCGACACTCATAA+TGG | - | chr1_2:43215715-43215734 | Msa0071380:intron | 40.0% | |
| ! | TCCATTATGAGTGTCGCATT+TGG | + | chr1_2:43215719-43215738 | None:intergenic | 40.0% |
| AACCCTGCAATTACAACAGA+TGG | + | chr1_2:43215869-43215888 | None:intergenic | 40.0% | |
| !!! | TGTTGGGTTTTTTTCCTCTG+TGG | - | chr1_2:43215959-43215978 | Msa0071380:intron | 40.0% |
| CAATTAGATATCAGCCACAG+AGG | + | chr1_2:43215976-43215995 | None:intergenic | 40.0% | |
| TGGACCTTGCCCAAATTACA+GGG | - | chr1_2:43213354-43213373 | Msa0071380:intron | 45.0% | |
| TAACCCCTGTAATTTGGGCA+AGG | + | chr1_2:43213361-43213380 | None:intergenic | 45.0% | |
| AAATGGTGAATGTAGCAGGC+TGG | + | chr1_2:43213813-43213832 | None:intergenic | 45.0% | |
| GCAGAAATGGTGAATGTAGC+AGG | + | chr1_2:43213817-43213836 | None:intergenic | 45.0% | |
| GGCAAGATGATTCTCCACAA+AGG | + | chr1_2:43214344-43214363 | None:intergenic | 45.0% | |
| TCATCTTGCCCTATTTCGGT+TGG | - | chr1_2:43214354-43214373 | Msa0071380:intron | 45.0% | |
| ATAGCAACGACTTACAGGTG+GGG | + | chr1_2:43214421-43214440 | None:intergenic | 45.0% | |
| ATCTTTCCCCTCTATCCTTG+AGG | - | chr1_2:43215022-43215041 | Msa0071380:CDS | 45.0% | |
| TCTTTCCCCTCTATCCTTGA+GGG | - | chr1_2:43215023-43215042 | Msa0071380:CDS | 45.0% | |
| TATAGCCCTCAAGGATAGAG+GGG | + | chr1_2:43215031-43215050 | None:intergenic | 45.0% | |
| GACCCTAAAATCTCAAACGG+TGG | + | chr1_2:43215220-43215239 | None:intergenic | 45.0% | |
| !!! | AGGGTCTAGGTTTTTGGTAC+TGG | - | chr1_2:43215234-43215253 | Msa0071380:intron | 45.0% |
| !!! | GGGTCTAGGTTTTTGGTACT+GGG | - | chr1_2:43215235-43215254 | Msa0071380:intron | 45.0% |
| TGAACACAGAAGAGCGAACT+AGG | + | chr1_2:43215325-43215344 | None:intergenic | 45.0% | |
| ! | TGCGACACTCATAATGGAAC+AGG | - | chr1_2:43215721-43215740 | Msa0071380:intron | 45.0% |
| ! | GCGACACTCATAATGGAACA+GGG | - | chr1_2:43215722-43215741 | Msa0071380:intron | 45.0% |
| ! | CGACACTCATAATGGAACAG+GGG | - | chr1_2:43215723-43215742 | Msa0071380:intron | 45.0% |
| TCATCATAATCCAGCACGAC+TGG | - | chr1_2:43216083-43216102 | Msa0071380:CDS | 45.0% | |
| AATCAACATACCAGTCGTGC+TGG | + | chr1_2:43216096-43216115 | None:intergenic | 45.0% | |
| GATCCTCCCTTGAGAAACGA+TGG | - | chr1_2:43212664-43212683 | Msa0071380:three_prime_UTR | 50.0% | |
| TCTCCATCGTTTCTCAAGGG+AGG | + | chr1_2:43212670-43212689 | None:intergenic | 50.0% | |
| ATAGTGAACATCGGTGGCGT+CGG | + | chr1_2:43212756-43212775 | None:intergenic | 50.0% | |
| GCCACCGATGTTCACTATTG+CGG | - | chr1_2:43212758-43212777 | Msa0071380:three_prime_UTR | 50.0% | |
| ACCGCAATAGTGAACATCGG+TGG | + | chr1_2:43212762-43212781 | None:intergenic | 50.0% | |
| CTGGACCTTGCCCAAATTAC+AGG | - | chr1_2:43213353-43213372 | Msa0071380:intron | 50.0% | |
| GGACCTTGCCCAAATTACAG+GGG | - | chr1_2:43213355-43213374 | Msa0071380:intron | 50.0% | |
| AGTGAGACCCATGACCTTTG+TGG | - | chr1_2:43214327-43214346 | Msa0071380:intron | 50.0% | |
| CAGATGTCAGTCCCTTTCCT+AGG | + | chr1_2:43214576-43214595 | None:intergenic | 50.0% | |
| TGGTCGATGCCTGATCAACG+TGG | - | chr1_2:43213122-43213141 | Msa0071380:intron | 55.0% | |
| TCGATGCCTGATCAACGTGG+AGG | - | chr1_2:43213125-43213144 | Msa0071380:intron | 55.0% | |
| CGATGCCTGATCAACGTGGA+GGG | - | chr1_2:43213126-43213145 | Msa0071380:intron | 55.0% | |
| GATGCCTGATCAACGTGGAG+GGG | - | chr1_2:43213127-43213146 | Msa0071380:intron | 55.0% | |
| ! | GTGCTGCTATGGCCGCTATT+CGG | - | chr1_2:43214156-43214175 | Msa0071380:intron | 55.0% |
| CTTACAGGTGGGGTGTATGC+AGG | + | chr1_2:43214411-43214430 | None:intergenic | 55.0% | |
| GTGACCCCTCCACGTTGATC+AGG | + | chr1_2:43213134-43213153 | None:intergenic | 60.0% | |
| TCTCCTGAGCCCGTTGCAAG+AGG | - | chr1_2:43213787-43213806 | Msa0071380:intron | 60.0% | |
| !! | AGCAGGCTGGCCTCTTGCAA+CGG | + | chr1_2:43213800-43213819 | None:intergenic | 60.0% |
| ! | TGGCCTCTTGCAACGGGCTC+AGG | + | chr1_2:43213793-43213812 | None:intergenic | 65.0% |
| !! | GCAGGCTGGCCTCTTGCAAC+GGG | + | chr1_2:43213799-43213818 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 43212571 | 43216255 | 43212571 | ID=Msa0071380;Name=Msa0071380 |
| chr1_2 | mRNA | 43212571 | 43216255 | 43212571 | ID=Msa0071380-mRNA-1;Parent=Msa0071380;Name=Msa0071380-mRNA-1;_AED=0.24;_eAED=0.24;_QI=112|1|1|1|1|1|4|263|155 |
| chr1_2 | exon | 43212571 | 43212941 | 43212571 | ID=Msa0071380-mRNA-1:exon:13049;Parent=Msa0071380-mRNA-1 |
| chr1_2 | exon | 43214401 | 43214561 | 43214401 | ID=Msa0071380-mRNA-1:exon:13048;Parent=Msa0071380-mRNA-1 |
| chr1_2 | exon | 43214982 | 43215083 | 43214982 | ID=Msa0071380-mRNA-1:exon:13047;Parent=Msa0071380-mRNA-1 |
| chr1_2 | exon | 43216047 | 43216255 | 43216047 | ID=Msa0071380-mRNA-1:exon:13046;Parent=Msa0071380-mRNA-1 |
| chr1_2 | five_prime_UTR | 43216144 | 43216255 | 43216144 | ID=Msa0071380-mRNA-1:five_prime_utr;Parent=Msa0071380-mRNA-1 |
| chr1_2 | CDS | 43216047 | 43216143 | 43216047 | ID=Msa0071380-mRNA-1:cds;Parent=Msa0071380-mRNA-1 |
| chr1_2 | CDS | 43214982 | 43215083 | 43214982 | ID=Msa0071380-mRNA-1:cds;Parent=Msa0071380-mRNA-1 |
| chr1_2 | CDS | 43214401 | 43214561 | 43214401 | ID=Msa0071380-mRNA-1:cds;Parent=Msa0071380-mRNA-1 |
| chr1_2 | CDS | 43212834 | 43212941 | 43212834 | ID=Msa0071380-mRNA-1:cds;Parent=Msa0071380-mRNA-1 |
| chr1_2 | three_prime_UTR | 43212571 | 43212833 | 43212571 | ID=Msa0071380-mRNA-1:three_prime_utr;Parent=Msa0071380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
