Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640860 | XP_013455698.1 | 96.931 | 391 | 12 | 0 | 1 | 391 | 1 | 391 | 0.0 | 785 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640860 | sp|Q8VWF6|SSL3_ARATH | 71.244 | 386 | 108 | 2 | 7 | 391 | 6 | 389 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa0640860 | 0.832374 | 9.806014e-56 | -8.615850e-47 |
| Msa0010890 | Msa0640860 | 0.801726 | 7.858071e-49 | -8.615850e-47 |
| Msa0022310 | Msa0640860 | 0.821393 | 4.134513e-53 | -8.615850e-47 |
| Msa0640860 | Msa0663380 | 0.801181 | 1.016429e-48 | -8.615850e-47 |
| Msa0640860 | Msa0685900 | 0.814245 | 1.699654e-51 | -8.615850e-47 |
| Msa0640860 | Msa0691050 | 0.802456 | 5.562628e-49 | -8.615850e-47 |
| Msa0640860 | Msa0731940 | 0.824821 | 6.558436e-54 | -8.615850e-47 |
| Msa0640860 | Msa0735170 | 0.814826 | 1.264369e-51 | -8.615850e-47 |
| Msa0640860 | Msa0753720 | 0.828663 | 7.933408e-55 | -8.615850e-47 |
| Msa0640860 | Msa0760130 | 0.830069 | 3.613114e-55 | -8.615850e-47 |
| Msa0640860 | Msa0834880 | 0.801968 | 7.010356e-49 | -8.615850e-47 |
| Msa0640860 | Msa0836850 | 0.804527 | 2.069927e-49 | -8.615850e-47 |
| Msa0640860 | Msa0857220 | 0.835466 | 1.651239e-56 | -8.615850e-47 |
| Msa0640860 | Msa0962340 | 0.820673 | 6.059100e-53 | -8.615850e-47 |
| Msa0640860 | Msa0965610 | 0.812264 | 4.626286e-51 | -8.615850e-47 |
| Msa0640860 | Msa0969450 | 0.803180 | 3.941568e-49 | -8.615850e-47 |
| Msa0640860 | Msa0969520 | 0.812510 | 4.087901e-51 | -8.615850e-47 |
| Msa0640860 | Msa1016320 | 0.809271 | 2.054689e-50 | -8.615850e-47 |
| Msa0640860 | Msa1038990 | 0.801153 | 1.030078e-48 | -8.615850e-47 |
| Msa0640860 | Msa1061060 | -0.812672 | 3.767879e-51 | -8.615850e-47 |
| Msa0640860 | Msa1080960 | 0.806475 | 8.080813e-50 | -8.615850e-47 |
| Msa0640860 | Msa1089940 | 0.801514 | 8.686764e-49 | -8.615850e-47 |
| Msa0640860 | Msa1098250 | 0.811491 | 6.816945e-51 | -8.615850e-47 |
| Msa0640860 | Msa1121490 | 0.821959 | 3.058931e-53 | -8.615850e-47 |
| Msa0640860 | Msa1130550 | 0.814023 | 1.903042e-51 | -8.615850e-47 |
| Msa0640860 | Msa1137570 | 0.804927 | 1.707443e-49 | -8.615850e-47 |
| Msa0640860 | Msa1158310 | 0.818944 | 1.504820e-52 | -8.615850e-47 |
| Msa0640860 | Msa1229600 | 0.803126 | 4.044646e-49 | -8.615850e-47 |
| Msa0640860 | Msa1238930 | 0.810269 | 1.253720e-50 | -8.615850e-47 |
| Msa0640860 | Msa1268880 | 0.800214 | 1.600464e-48 | -8.615850e-47 |
| Msa0640860 | Msa1313150 | 0.807678 | 4.496168e-50 | -8.615850e-47 |
| Msa0640860 | Msa1332000 | 0.800022 | 1.751138e-48 | -8.615850e-47 |
| Msa0640860 | Msa1341520 | 0.809547 | 1.792817e-50 | -8.615850e-47 |
| Msa0640860 | Msa1353470 | 0.808685 | 2.742639e-50 | -8.615850e-47 |
| Msa0640860 | Msa1393410 | 0.810195 | 1.300714e-50 | -8.615850e-47 |
| Msa0640860 | Msa1410680 | 0.804441 | 2.156615e-49 | -8.615850e-47 |
| Msa0640860 | Msa1423880 | 0.822755 | 1.999110e-53 | -8.615850e-47 |
| Msa0640860 | Msa1435420 | 0.807590 | 4.692867e-50 | -8.615850e-47 |
| Msa0149300 | Msa0640860 | 0.834351 | 3.152295e-56 | -8.615850e-47 |
| Msa0165210 | Msa0640860 | 0.801706 | 7.933046e-49 | -8.615850e-47 |
| Msa0201920 | Msa0640860 | 0.802051 | 6.737981e-49 | -8.615850e-47 |
| Msa0388960 | Msa0640860 | 0.814957 | 1.182058e-51 | -8.615850e-47 |
| Msa0395790 | Msa0640860 | 0.802980 | 4.336462e-49 | -8.615850e-47 |
| Msa0405130 | Msa0640860 | 0.801083 | 1.064428e-48 | -8.615850e-47 |
| Msa0464260 | Msa0640860 | 0.805671 | 1.193023e-49 | -8.615850e-47 |
| Msa0269810 | Msa0640860 | 0.807696 | 4.455779e-50 | -8.615850e-47 |
| Msa0294590 | Msa0640860 | 0.802566 | 5.279023e-49 | -8.615850e-47 |
| Msa0350990 | Msa0640860 | 0.812232 | 4.702973e-51 | -8.615850e-47 |
| Msa0351030 | Msa0640860 | 0.813288 | 2.761916e-51 | -8.615850e-47 |
| Msa0572420 | Msa0640860 | 0.800067 | 1.714860e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640860 | MtrunA17_Chr4g0025341 | 96.931 | 391 | 12 | 0 | 1 | 391 | 1 | 391 | 0.0 | 785 |
| Msa0640860 | MtrunA17_Chr2g0322241 | 78.571 | 392 | 83 | 1 | 1 | 391 | 4 | 395 | 0.0 | 647 |
| Msa0640860 | MtrunA17_Chr7g0256581 | 51.765 | 340 | 153 | 5 | 55 | 391 | 38 | 369 | 8.32e-118 | 347 |
| Msa0640860 | MtrunA17_Chr7g0256571 | 50.000 | 352 | 162 | 7 | 44 | 391 | 28 | 369 | 2.63e-115 | 340 |
| Msa0640860 | MtrunA17_Chr7g0256561 | 48.974 | 341 | 124 | 6 | 54 | 391 | 42 | 335 | 9.00e-104 | 310 |
| Msa0640860 | MtrunA17_Chr2g0329531 | 42.239 | 393 | 218 | 5 | 3 | 388 | 13 | 403 | 8.26e-102 | 307 |
| Msa0640860 | MtrunA17_Chr5g0443561 | 48.225 | 338 | 123 | 6 | 57 | 391 | 35 | 323 | 1.29e-98 | 296 |
| Msa0640860 | MtrunA17_Chr7g0256591 | 43.844 | 333 | 178 | 7 | 66 | 390 | 54 | 385 | 4.73e-93 | 284 |
| Msa0640860 | MtrunA17_Chr7g0256601 | 43.161 | 329 | 179 | 7 | 70 | 390 | 88 | 416 | 2.19e-89 | 276 |
| Msa0640860 | MtrunA17_Chr4g0062001 | 37.609 | 343 | 174 | 10 | 58 | 389 | 21 | 334 | 1.40e-71 | 227 |
| Msa0640860 | MtrunA17_Chr8g0376581 | 37.463 | 339 | 175 | 9 | 56 | 389 | 24 | 330 | 8.22e-70 | 223 |
| Msa0640860 | MtrunA17_Chr4g0062021 | 37.758 | 339 | 167 | 11 | 64 | 389 | 39 | 346 | 2.01e-63 | 206 |
| Msa0640860 | MtrunA17_Chr4g0062031 | 36.667 | 330 | 160 | 7 | 68 | 389 | 36 | 324 | 1.99e-62 | 203 |
| Msa0640860 | MtrunA17_Chr2g0307721 | 37.695 | 321 | 163 | 7 | 68 | 382 | 45 | 334 | 2.16e-58 | 203 |
| Msa0640860 | MtrunA17_Chr2g0307721 | 35.671 | 328 | 174 | 7 | 67 | 388 | 496 | 792 | 1.68e-54 | 192 |
| Msa0640860 | MtrunA17_Chr2g0307721 | 50.000 | 82 | 40 | 1 | 123 | 203 | 340 | 421 | 1.55e-14 | 75.5 |
| Msa0640860 | MtrunA17_Chr8g0370761 | 32.454 | 379 | 210 | 10 | 10 | 386 | 27 | 361 | 1.03e-47 | 166 |
| Msa0640860 | MtrunA17_Chr8g0370791 | 31.565 | 377 | 216 | 9 | 10 | 386 | 27 | 361 | 6.55e-45 | 159 |
| Msa0640860 | MtrunA17_Chr2g0300841 | 31.159 | 276 | 162 | 5 | 128 | 391 | 98 | 357 | 4.26e-37 | 137 |
| Msa0640860 | MtrunA17_Chr8g0370771 | 33.333 | 234 | 146 | 4 | 154 | 387 | 4 | 227 | 3.75e-35 | 129 |
| Msa0640860 | MtrunA17_Chr2g0300851 | 29.710 | 276 | 165 | 5 | 128 | 391 | 91 | 349 | 2.44e-34 | 130 |
| Msa0640860 | MtrunA17_Chr2g0300861 | 30.303 | 264 | 171 | 5 | 128 | 387 | 110 | 364 | 2.06e-32 | 125 |
| Msa0640860 | MtrunA17_Chr4g0020271 | 32.524 | 206 | 114 | 3 | 179 | 383 | 2 | 183 | 2.89e-32 | 120 |
| Msa0640860 | MtrunA17_Chr4g0062051 | 42.553 | 141 | 71 | 4 | 68 | 203 | 40 | 175 | 8.15e-26 | 102 |
| Msa0640860 | MtrunA17_Chr4g0061871 | 41.237 | 97 | 57 | 0 | 203 | 299 | 18 | 114 | 1.24e-22 | 92.4 |
| Msa0640860 | MtrunA17_Chr8g0370801 | 35.185 | 108 | 67 | 1 | 153 | 257 | 2 | 109 | 2.32e-18 | 80.1 |
| Msa0640860 | MtrunA17_Chr4g0062061 | 27.027 | 148 | 76 | 1 | 242 | 389 | 4 | 119 | 2.21e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0640860 | AT1G08470.1 | 71.244 | 386 | 108 | 2 | 7 | 391 | 6 | 389 | 0.0 | 587 |
| Msa0640860 | AT5G22020.3 | 67.553 | 376 | 119 | 2 | 17 | 391 | 22 | 395 | 0.0 | 548 |
| Msa0640860 | AT5G22020.1 | 67.553 | 376 | 119 | 2 | 17 | 391 | 22 | 395 | 0.0 | 548 |
| Msa0640860 | AT5G22020.2 | 67.553 | 376 | 119 | 2 | 17 | 391 | 22 | 395 | 0.0 | 548 |
| Msa0640860 | AT3G57030.1 | 49.856 | 347 | 165 | 4 | 48 | 391 | 34 | 374 | 1.63e-119 | 352 |
| Msa0640860 | AT3G59530.3 | 43.182 | 396 | 203 | 7 | 1 | 388 | 13 | 394 | 1.78e-102 | 309 |
| Msa0640860 | AT3G59530.2 | 43.182 | 396 | 203 | 7 | 1 | 388 | 13 | 394 | 1.78e-102 | 309 |
| Msa0640860 | AT3G59530.1 | 43.182 | 396 | 203 | 7 | 1 | 388 | 13 | 394 | 1.78e-102 | 309 |
| Msa0640860 | AT3G57010.1 | 48.160 | 326 | 154 | 6 | 68 | 388 | 52 | 367 | 7.20e-100 | 301 |
| Msa0640860 | AT3G57020.1 | 48.182 | 330 | 148 | 8 | 68 | 388 | 51 | 366 | 5.80e-95 | 289 |
| Msa0640860 | AT2G41300.1 | 45.741 | 317 | 158 | 5 | 76 | 388 | 84 | 390 | 7.83e-92 | 281 |
| Msa0640860 | AT3G57020.2 | 46.341 | 328 | 143 | 7 | 68 | 388 | 51 | 352 | 7.30e-89 | 273 |
| Msa0640860 | AT2G41290.1 | 41.848 | 368 | 177 | 11 | 46 | 391 | 24 | 376 | 3.54e-85 | 264 |
| Msa0640860 | AT1G74010.1 | 38.739 | 333 | 157 | 11 | 66 | 391 | 33 | 325 | 2.38e-53 | 180 |
| Msa0640860 | AT1G74000.1 | 37.386 | 329 | 160 | 10 | 70 | 391 | 40 | 329 | 1.12e-52 | 178 |
| Msa0640860 | AT1G74020.1 | 34.848 | 330 | 169 | 9 | 69 | 391 | 37 | 327 | 7.35e-50 | 171 |
| Msa0640860 | AT3G51440.1 | 33.333 | 264 | 151 | 5 | 56 | 317 | 55 | 295 | 4.63e-35 | 133 |
| Msa0640860 | AT3G51420.1 | 29.552 | 335 | 201 | 9 | 56 | 387 | 55 | 357 | 1.88e-34 | 131 |
| Msa0640860 | AT3G51430.1 | 29.102 | 323 | 193 | 8 | 1 | 317 | 3 | 295 | 1.26e-33 | 129 |
| Msa0640860 | AT3G51450.1 | 30.097 | 309 | 184 | 10 | 10 | 317 | 18 | 295 | 1.94e-32 | 125 |
| Msa0640860 | AT3G51430.2 | 29.102 | 323 | 191 | 9 | 1 | 317 | 3 | 293 | 2.62e-32 | 125 |
Find 121 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACGTAAATATTGGTTAAA+AGG | 0.214137 | 4_3:-40240220 | Msa0640860:CDS |
| TGTTCTGGAATGGACTTTCT+TGG | 0.232101 | 4_3:-40243246 | Msa0640860:CDS |
| CCCTGAATTTGAATCCAAAA+AGG | 0.232481 | 4_3:-40243431 | Msa0640860:CDS |
| TATTTACTCTTATTCTTTGT+TGG | 0.235592 | 4_3:+40239640 | None:intergenic |
| TTATGTTCATCTCTGTCTTT+AGG | 0.242130 | 4_3:+40243382 | None:intergenic |
| AGGATTTAACCTTACCTATT+AGG | 0.245032 | 4_3:+40243202 | None:intergenic |
| AGTTTATAAACTGCAATAAA+AGG | 0.276571 | 4_3:+40239848 | None:intergenic |
| TTGCTTACACCTCGCCTAAT+AGG | 0.301819 | 4_3:-40243216 | Msa0640860:intron |
| TACATTGCAGATGCATATCT+TGG | 0.310576 | 4_3:-40241387 | Msa0640860:CDS |
| AATAATGTACCTTGAGTTCT+TGG | 0.332639 | 4_3:-40239758 | Msa0640860:three_prime_UTR |
| CTTGGTCGTGGTCCTTATAC+TGG | 0.338615 | 4_3:-40243289 | Msa0640860:CDS |
| TGTGTAGATTACGTAAATAT+TGG | 0.346326 | 4_3:-40240228 | Msa0640860:intron |
| TATTGATTCTTTGTTGGTAT+TGG | 0.352926 | 4_3:+40240031 | None:intergenic |
| GAAGGAACCATCTTTGCTTA+AGG | 0.369652 | 4_3:+40240739 | None:intergenic |
| CACATATGTGGAAGGCCTTT+GGG | 0.371425 | 4_3:-40241441 | Msa0640860:CDS |
| GCACATATGTGGAAGGCCTT+TGG | 0.374573 | 4_3:-40241442 | Msa0640860:CDS |
| GCTATGGTACTGTGCTGAAA+TGG | 0.374685 | 4_3:+40243460 | None:intergenic |
| TCAGTCTTCACATAACTAAA+TGG | 0.375496 | 4_3:+40241465 | None:intergenic |
| GTTCTGGAATGGACTTTCTT+GGG | 0.382508 | 4_3:-40243245 | Msa0640860:CDS |
| ACAGCGGTTTCCTTTGTTGC+AGG | 0.383637 | 4_3:+40240797 | None:intergenic |
| CCATCAGCAACACCAGTATA+AGG | 0.384813 | 4_3:+40243277 | None:intergenic |
| GTTTGCTCTATACTGTGGTT+TGG | 0.385134 | 4_3:-40243485 | Msa0640860:CDS |
| AGCAAACAAGAGAAAGATAA+TGG | 0.392575 | 4_3:+40243501 | None:intergenic |
| TGCTTAAGGAAATGCCATTC+GGG | 0.393137 | 4_3:+40240753 | None:intergenic |
| AGGATAGCTTTCCTTATCCT+TGG | 0.398761 | 4_3:+40240061 | None:intergenic |
| ATCTGCAGTAATTTACCTTC+AGG | 0.399510 | 4_3:+40239959 | None:intergenic |
| GGCATTTCCTTAAGCAAAGA+TGG | 0.407911 | 4_3:-40240746 | Msa0640860:CDS |
| GCTTACCTCCGATTTGAAAC+AGG | 0.409854 | 4_3:+40240008 | None:intergenic |
| GAATGAATAACGTGTTTGTT+AGG | 0.415511 | 4_3:+40243622 | None:intergenic |
| AGGTAAATTACTGCAGATAT+TGG | 0.424873 | 4_3:-40239954 | Msa0640860:CDS |
| GTTAGGTTTCAATTGAATTG+TGG | 0.427736 | 4_3:+40243639 | None:intergenic |
| TTGCTTAAGGAAATGCCATT+CGG | 0.429482 | 4_3:+40240752 | None:intergenic |
| TTAGGTTTCAATTGAATTGT+GGG | 0.430035 | 4_3:+40243640 | None:intergenic |
| TCATTCACCCTCACATTGTC+GGG | 0.430646 | 4_3:+40240151 | None:intergenic |
| AGCTACTCCTCCTTTACATT+GGG | 0.433158 | 4_3:-40243709 | Msa0640860:five_prime_UTR |
| AACAGGTATTGATTCTTTGT+TGG | 0.434766 | 4_3:+40240025 | None:intergenic |
| TTGTTGGTATTGGAAGCTTA+AGG | 0.436181 | 4_3:+40240041 | None:intergenic |
| CTCAGATTTGACAAGAAAAC+AGG | 0.439068 | 4_3:-40241417 | Msa0640860:CDS |
| ACATCGTTAGTAAATCTTAG+AGG | 0.441444 | 4_3:+40241300 | None:intergenic |
| AAAAGGTTGACATGCCTGAT+TGG | 0.446198 | 4_3:-40243414 | Msa0640860:CDS |
| CTGGTTTATATCCAAGGATA+AGG | 0.446658 | 4_3:-40240072 | Msa0640860:CDS |
| CTATGGTACTGTGCTGAAAT+GGG | 0.451510 | 4_3:+40243461 | None:intergenic |
| TTCATTCACCCTCACATTGT+CGG | 0.455467 | 4_3:+40240150 | None:intergenic |
| AAATGGTGTCGCATTTGCTA+TGG | 0.459583 | 4_3:+40241482 | None:intergenic |
| AAGAGAAAGACGGTCAACTT+TGG | 0.464501 | 4_3:-40239889 | Msa0640860:CDS |
| AATCAATACCTGTTTCAAAT+CGG | 0.471637 | 4_3:-40240016 | Msa0640860:CDS |
| CTCACATTGTCGGGAGCTCC+AGG | 0.471745 | 4_3:+40240160 | None:intergenic |
| CTGTTGAAGGTGGGGCCCGA+GGG | 0.473423 | 4_3:-40241363 | Msa0640860:CDS |
| AGCATTGTGTTTGACCCTCT+TGG | 0.482152 | 4_3:-40243307 | Msa0640860:CDS |
| TTTGTGAAGGGTCTATTGGC+AGG | 0.483688 | 4_3:-40240709 | Msa0640860:intron |
| GCTGTTGAAGGTGGGGCCCG+AGG | 0.486767 | 4_3:-40241364 | Msa0640860:CDS |
| TTGAAGGTGGGGCCCGAGGG+AGG | 0.489783 | 4_3:-40241360 | Msa0640860:CDS |
| TATCTTGGGCTGTTGAAGGT+GGG | 0.490836 | 4_3:-40241372 | Msa0640860:CDS |
| GAAATACAACCCTGCAACAA+AGG | 0.493586 | 4_3:-40240807 | Msa0640860:CDS |
| ATCTTGGGCTGTTGAAGGTG+GGG | 0.493839 | 4_3:-40241371 | Msa0640860:CDS |
| CCTTATACTGGTGTTGCTGA+TGG | 0.493982 | 4_3:-40243277 | Msa0640860:CDS |
| ATGGAAGCAAAGCTCATCTC+AGG | 0.494668 | 4_3:+40239723 | None:intergenic |
| AGATGTTGCTAAACCTCCCT+CGG | 0.499939 | 4_3:+40241347 | None:intergenic |
| GTACAGGAATTTCATGCAGC+TGG | 0.501498 | 4_3:-40240861 | Msa0640860:intron |
| ATATTGGTTAAAAGGAGAAA+AGG | 0.502297 | 4_3:-40240212 | Msa0640860:CDS |
| CTCTTGCAACTGAGGCTGAA+GGG | 0.504563 | 4_3:-40241326 | Msa0640860:CDS |
| AAAGACGGTCAACTTTGGAT+TGG | 0.506234 | 4_3:-40239884 | Msa0640860:CDS |
| TTAGGAACCTCAGACCAATC+AGG | 0.508111 | 4_3:+40243400 | None:intergenic |
| TGCATATCTTGGGCTGTTGA+AGG | 0.508916 | 4_3:-40241376 | Msa0640860:CDS |
| ATATTTGTTTCCCAATGTAA+AGG | 0.510898 | 4_3:+40243699 | None:intergenic |
| GGGTCAAACACAATGCTCTC+AGG | 0.511757 | 4_3:+40243313 | None:intergenic |
| TGGTTAAAAGGAGAAAAGGC+TGG | 0.512231 | 4_3:-40240208 | Msa0640860:CDS |
| CAGCGGTTTCCTTTGTTGCA+GGG | 0.514020 | 4_3:+40240798 | None:intergenic |
| TTCTGGGGATGATAGTGGAA+AGG | 0.516244 | 4_3:-40240834 | Msa0640860:CDS |
| AATGGTGTCGCATTTGCTAT+GGG | 0.516733 | 4_3:+40241483 | None:intergenic |
| AGGAGAAAAGGCTGGGACAT+CGG | 0.522741 | 4_3:-40240200 | Msa0640860:CDS |
| TGTTAGAGCTGTGAGTGAAG+TGG | 0.524832 | 4_3:-40239912 | Msa0640860:CDS |
| AAATTCAGGGAAATTTGCTA+TGG | 0.527486 | 4_3:+40243444 | None:intergenic |
| ACATTGCAGATGCATATCTT+GGG | 0.529752 | 4_3:-40241386 | Msa0640860:CDS |
| TTGATCTTCAGCTCTATCAC+AGG | 0.531244 | 4_3:-40239804 | Msa0640860:three_prime_UTR |
| ATATCTTGGGCTGTTGAAGG+TGG | 0.531295 | 4_3:-40241373 | Msa0640860:CDS |
| CTCTTGTTTGCTCTATACTG+TGG | 0.532134 | 4_3:-40243490 | Msa0640860:CDS |
| GAGCTACTCCTCCTTTACAT+TGG | 0.532785 | 4_3:-40243710 | Msa0640860:five_prime_UTR |
| GTGTTTGACCCTCTTGGTCG+TGG | 0.539308 | 4_3:-40243301 | Msa0640860:CDS |
| AATGTACCTTGAGTTCTTGG+TGG | 0.542542 | 4_3:-40239755 | Msa0640860:three_prime_UTR |
| ACTATACTGGTTTATATCCA+AGG | 0.552390 | 4_3:-40240078 | Msa0640860:CDS |
| GTTTCAATTGAATTGTGGGT+AGG | 0.555087 | 4_3:+40243644 | None:intergenic |
| TTTATTCCACCAAGAACTCA+AGG | 0.564758 | 4_3:+40239749 | None:intergenic |
| GATGTTGCTAAACCTCCCTC+GGG | 0.566662 | 4_3:+40241348 | None:intergenic |
| TCTTGCAACTGAGGCTGAAG+GGG | 0.566753 | 4_3:-40241325 | Msa0640860:CDS |
| TAAATTACTGCAGATATTGG+AGG | 0.568473 | 4_3:-40239951 | Msa0640860:CDS |
| AGCAACATCTCTTGCAACTG+AGG | 0.569286 | 4_3:-40241334 | Msa0640860:CDS |
| TCTCTTGCAACTGAGGCTGA+AGG | 0.569638 | 4_3:-40241327 | Msa0640860:CDS |
| GAGATCTTAGCTATCCTACC+TGG | 0.569639 | 4_3:-40240178 | Msa0640860:CDS |
| AATTGAATTGTGGGTAGGTG+AGG | 0.574263 | 4_3:+40243649 | None:intergenic |
| CAAGAGAAAGATAATGGCAA+AGG | 0.575699 | 4_3:+40243507 | None:intergenic |
| AGAGTCATGATGTTATTGAA+AGG | 0.575842 | 4_3:+40243538 | None:intergenic |
| GGTTAAAAGGAGAAAAGGCT+GGG | 0.576153 | 4_3:-40240207 | Msa0640860:CDS |
| TTTGTTTCCCAATGTAAAGG+AGG | 0.577937 | 4_3:+40243702 | None:intergenic |
| AGGAAACCGCTGTTCTAGTG+AGG | 0.578954 | 4_3:-40240787 | Msa0640860:CDS |
| GTGATAGAGCTGAAGATCAA+AGG | 0.580671 | 4_3:+40239807 | None:intergenic |
| CTGGAGCTCCCGACAATGTG+AGG | 0.585247 | 4_3:-40240159 | Msa0640860:CDS |
| AGGTTGAAATGTGAATGTTA+TGG | 0.598072 | 4_3:+40243558 | None:intergenic |
| TTGTCAAATCTGAGTCCCAA+AGG | 0.599150 | 4_3:+40241426 | None:intergenic |
| CAATACCTGTTTCAAATCGG+AGG | 0.600119 | 4_3:-40240013 | Msa0640860:CDS |
| GTGAAGACTGAGCACATATG+TGG | 0.600536 | 4_3:-40241453 | Msa0640860:CDS |
| GCAGTTCTATTTATCAGAGG+AGG | 0.604762 | 4_3:-40241239 | Msa0640860:intron |
| AACATCCCTCACTAGAACAG+CGG | 0.608476 | 4_3:+40240781 | None:intergenic |
| CAAATCGGAGGTAAGCAACA+TGG | 0.612312 | 4_3:-40240001 | Msa0640860:CDS |
| AAAGCAGTTCTATTTATCAG+AGG | 0.613913 | 4_3:-40241242 | Msa0640860:CDS |
| GGAAACCGCTGTTCTAGTGA+GGG | 0.616307 | 4_3:-40240786 | Msa0640860:CDS |
| TGGAGCTCCCGACAATGTGA+GGG | 0.616670 | 4_3:-40240158 | Msa0640860:CDS |
| TGACATGCCTGATTGGTCTG+AGG | 0.623043 | 4_3:-40243407 | Msa0640860:CDS |
| CAGATATTGGAGGACAGTGA+GGG | 0.630580 | 4_3:-40239941 | Msa0640860:CDS |
| GCAGATATTGGAGGACAGTG+AGG | 0.631429 | 4_3:-40239942 | Msa0640860:CDS |
| GATGTCGATGTTGATTCAGA+AGG | 0.631934 | 4_3:-40241282 | Msa0640860:CDS |
| AATGTGAGGGTGAATGAAGA+TGG | 0.632486 | 4_3:-40240145 | Msa0640860:CDS |
| GAGGTAGCAAGCAACGTGTG+TGG | 0.645184 | 4_3:+40243668 | None:intergenic |
| CATTGTCGGGAGCTCCAGGT+AGG | 0.648945 | 4_3:+40240164 | None:intergenic |
| AGGGATGTTCAATTCCCGAA+TGG | 0.653548 | 4_3:-40240767 | Msa0640860:CDS |
| AGACTGAGCACATATGTGGA+AGG | 0.658947 | 4_3:-40241449 | Msa0640860:CDS |
| ATTGTGAAGTATAGTCCTGA+AGG | 0.659981 | 4_3:-40239974 | Msa0640860:CDS |
| GTATAAGGACCACGACCAAG+AGG | 0.662985 | 4_3:+40243292 | None:intergenic |
| TTAACCTTACCTATTAGGCG+AGG | 0.666533 | 4_3:+40243207 | None:intergenic |
| AGTGAAGTGGAAGAGAAAGA+CGG | 0.668343 | 4_3:-40239899 | Msa0640860:CDS |
| TATAAGGACCACGACCAAGA+GGG | 0.675484 | 4_3:+40243293 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTACAATTTTTATTT+GGG | + | chr4_3:40240543-40240562 | None:intergenic | 10.0% |
| !!! | AATTTTGTACAATTTTTATT+TGG | + | chr4_3:40240544-40240563 | None:intergenic | 10.0% |
| !!! | TATTTTTAAAAGATTCATTT+TGG | + | chr4_3:40241699-40241718 | None:intergenic | 10.0% |
| !! | TTGTTTGTAAAAAAAAAAAT+GGG | + | chr4_3:40243037-40243056 | None:intergenic | 10.0% |
| !! | TATAAAAAGAGTTATTGTTA+AGG | + | chr4_3:40240332-40240351 | None:intergenic | 15.0% |
| !! | TGACAATAATAAATAGTAAA+AGG | + | chr4_3:40240606-40240625 | None:intergenic | 15.0% |
| !!! | TAAAGTAGTCAATTTTATAT+GGG | + | chr4_3:40240675-40240694 | None:intergenic | 15.0% |
| !!! | TTAAAGTAGTCAATTTTATA+TGG | + | chr4_3:40240676-40240695 | None:intergenic | 15.0% |
| !!! | TAATTTTGAGTAAAAGATAA+AGG | - | chr4_3:40241731-40241750 | Msa0640860:intron | 15.0% |
| !!! | TTTAGTTTATTTTTAAGCTT+TGG | - | chr4_3:40241771-40241790 | Msa0640860:intron | 15.0% |
| !! | TATATATCTATTTCAAAAAC+AGG | - | chr4_3:40241841-40241860 | Msa0640860:intron | 15.0% |
| !! | TTTCAGAATTAAAAACATTA+AGG | + | chr4_3:40242427-40242446 | None:intergenic | 15.0% |
| !! | TGTTTGTAAAAAAAAAAATG+GGG | + | chr4_3:40243036-40243055 | None:intergenic | 15.0% |
| !! | CTTGTTTGTAAAAAAAAAAA+TGG | + | chr4_3:40243038-40243057 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTTTTACAAACA+AGG | - | chr4_3:40243036-40243055 | Msa0640860:intron | 15.0% |
| !! | AAGAAATTATTGAAATGAAA+AGG | + | chr4_3:40243109-40243128 | None:intergenic | 15.0% |
| !! | AATAAGTAAGTATATACCAA+AGG | - | chr4_3:40240367-40240386 | Msa0640860:intron | 20.0% |
| !! | ATAAGTAAGTATATACCAAA+GGG | - | chr4_3:40240368-40240387 | Msa0640860:intron | 20.0% |
| !! | TGTTAATCTATGAATATGAA+TGG | + | chr4_3:40241137-40241156 | None:intergenic | 20.0% |
| !! | CATATTCATAGATTAACATA+AGG | - | chr4_3:40241139-40241158 | Msa0640860:intron | 20.0% |
| !!! | ATCTTTTACTCAGTTTATTT+TGG | - | chr4_3:40241263-40241282 | Msa0640860:CDS | 20.0% |
| !! | TATAACATTGCAAAGATAAA+AGG | + | chr4_3:40241318-40241337 | None:intergenic | 20.0% |
| !!! | AGAAGGAAATGTTTATTTTA+CGG | - | chr4_3:40242094-40242113 | Msa0640860:intron | 20.0% |
| !!! | AATGTATTATGTTAGTTTCT+TGG | - | chr4_3:40242732-40242751 | Msa0640860:intron | 20.0% |
| !!! | ATGTATTATGTTAGTTTCTT+GGG | - | chr4_3:40242733-40242752 | Msa0640860:intron | 20.0% |
| !!! | GAAATTTTATCTGTTATAGT+AGG | - | chr4_3:40242759-40242778 | Msa0640860:intron | 20.0% |
| !! | TCAAAATATATCACTTTAGA+CGG | + | chr4_3:40242803-40242822 | None:intergenic | 20.0% |
| !!! | TTACGTAAATATTGGTTAAA+AGG | - | chr4_3:40243139-40243158 | Msa0640860:intron | 20.0% |
| !! | AGTTTATAAACTGCAATAAA+AGG | + | chr4_3:40243514-40243533 | None:intergenic | 20.0% |
| !! | AATAACCAAAAAAGACAATA+TGG | + | chr4_3:40243658-40243677 | None:intergenic | 20.0% |
| ! | ATATTTGTTTCCCAATGTAA+AGG | + | chr4_3:40239663-40239682 | None:intergenic | 25.0% |
| ! | TTAGGTTTCAATTGAATTGT+GGG | + | chr4_3:40239722-40239741 | None:intergenic | 25.0% |
| !!! | GGATTTTTTGTTCATTCTTT+AGG | - | chr4_3:40240192-40240211 | Msa0640860:CDS | 25.0% |
| ! | ACTATATACTCCTAAAGTAA+AGG | - | chr4_3:40240232-40240251 | Msa0640860:intron | 25.0% |
| ! | GATTGATAGAACAGTATTAA+CGG | - | chr4_3:40240390-40240409 | Msa0640860:intron | 25.0% |
| !!! | TTGGAATTTTGATACATTCA+AGG | - | chr4_3:40240469-40240488 | Msa0640860:intron | 25.0% |
| !!! | ATTTGGGTTAATAGTCATTT+TGG | + | chr4_3:40240527-40240546 | None:intergenic | 25.0% |
| !!! | CTTTAATGTTATTTTCCTAC+AGG | - | chr4_3:40240579-40240598 | Msa0640860:intron | 25.0% |
| !! | ACTCTTATAATTTGAGATAG+AGG | - | chr4_3:40240718-40240737 | Msa0640860:CDS | 25.0% |
| ! | AGGTAATACTATATAGTTGA+GGG | - | chr4_3:40240738-40240757 | Msa0640860:CDS | 25.0% |
| ! | CTTGATATTGTGGAAAATTA+CGG | - | chr4_3:40240799-40240818 | Msa0640860:CDS | 25.0% |
| ! | CATTAAAAACTGTTATGTAG+CGG | - | chr4_3:40240864-40240883 | Msa0640860:intron | 25.0% |
| ! | TAATTAGTTGTTAGAAATGC+TGG | + | chr4_3:40241034-40241053 | None:intergenic | 25.0% |
| ! | CAGATTCAACAAAAGAAAAA+GGG | + | chr4_3:40241228-40241247 | None:intergenic | 25.0% |
| ! | TCAGATTCAACAAAAGAAAA+AGG | + | chr4_3:40241229-40241248 | None:intergenic | 25.0% |
| ! | CTGAGTAAAAGATAAAAGAT+AGG | + | chr4_3:40241256-40241275 | None:intergenic | 25.0% |
| ! | ATACAAATATAGTGAAAGGA+AGG | + | chr4_3:40241406-40241425 | None:intergenic | 25.0% |
| ! | TTCGATACAAATATAGTGAA+AGG | + | chr4_3:40241410-40241429 | None:intergenic | 25.0% |
| !! | GATTCATGATTTTCAAAGTT+TGG | + | chr4_3:40241503-40241522 | None:intergenic | 25.0% |
| !!! | ATGGATATTTTGATTATCAC+AGG | - | chr4_3:40241575-40241594 | Msa0640860:intron | 25.0% |
| ! | ACTTTAATGTAGGTAGTAAA+TGG | - | chr4_3:40241641-40241660 | Msa0640860:intron | 25.0% |
| ! | TGATTCTGTTGTTAAACTTT+CGG | - | chr4_3:40242145-40242164 | Msa0640860:intron | 25.0% |
| ! | GAATAATCATATCCTTAAGA+GGG | - | chr4_3:40242249-40242268 | Msa0640860:intron | 25.0% |
| !! | TATGCAAAGAAAGTACATAT+AGG | + | chr4_3:40242375-40242394 | None:intergenic | 25.0% |
| ! | CATTCACCAATAAAAAAAGA+CGG | + | chr4_3:40242702-40242721 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAATGGGGAAGA+AGG | + | chr4_3:40243029-40243048 | None:intergenic | 25.0% |
| ! | CAGACATAGGAATTTAATAT+AGG | + | chr4_3:40243063-40243082 | None:intergenic | 25.0% |
| ! | TGTGTAGATTACGTAAATAT+TGG | - | chr4_3:40243131-40243150 | Msa0640860:intron | 25.0% |
| !! | ATATTGGTTAAAAGGAGAAA+AGG | - | chr4_3:40243147-40243166 | Msa0640860:intron | 25.0% |
| !! | TCTATGTTTTCATACTATAC+TGG | - | chr4_3:40243268-40243287 | Msa0640860:CDS | 25.0% |
| !!! | TATTGATTCTTTGTTGGTAT+TGG | + | chr4_3:40243331-40243350 | None:intergenic | 25.0% |
| ! | AATCAATACCTGTTTCAAAT+CGG | - | chr4_3:40243343-40243362 | Msa0640860:CDS | 25.0% |
| GTTAGGTTTCAATTGAATTG+TGG | + | chr4_3:40239723-40239742 | None:intergenic | 30.0% | |
| GAATGAATAACGTGTTTGTT+AGG | + | chr4_3:40239740-40239759 | None:intergenic | 30.0% | |
| AGGTTGAAATGTGAATGTTA+TGG | + | chr4_3:40239804-40239823 | None:intergenic | 30.0% | |
| AGAGTCATGATGTTATTGAA+AGG | + | chr4_3:40239824-40239843 | None:intergenic | 30.0% | |
| AGCAAACAAGAGAAAGATAA+TGG | + | chr4_3:40239861-40239880 | None:intergenic | 30.0% | |
| !! | AAATTCAGGGAAATTTGCTA+TGG | + | chr4_3:40239918-40239937 | None:intergenic | 30.0% |
| ! | CCTTTTTGGATTCAAATTCA+GGG | + | chr4_3:40239931-40239950 | None:intergenic | 30.0% |
| ! | ACCTTTTTGGATTCAAATTC+AGG | + | chr4_3:40239932-40239951 | None:intergenic | 30.0% |
| TTATGTTCATCTCTGTCTTT+AGG | + | chr4_3:40239980-40239999 | None:intergenic | 30.0% | |
| TGTTGCAAAAATCAGAGATA+AGG | - | chr4_3:40240002-40240021 | Msa0640860:CDS | 30.0% | |
| ! | AGGTTTTTGAATCAAGTACA+AGG | - | chr4_3:40240022-40240041 | Msa0640860:CDS | 30.0% |
| AGGATTTAACCTTACCTATT+AGG | + | chr4_3:40240160-40240179 | None:intergenic | 30.0% | |
| TTAAATCCTAATTCCTTCTC+AGG | - | chr4_3:40240171-40240190 | Msa0640860:CDS | 30.0% | |
| AAAAATCCTGAGAAGGAATT+AGG | + | chr4_3:40240180-40240199 | None:intergenic | 30.0% | |
| ATGAACAAAAAATCCTGAGA+AGG | + | chr4_3:40240187-40240206 | None:intergenic | 30.0% | |
| TGCAAAACTACCTTTACTTT+AGG | + | chr4_3:40240245-40240264 | None:intergenic | 30.0% | |
| !! | TAAAGGTAGTTTTGCAAGAA+GGG | - | chr4_3:40240249-40240268 | Msa0640860:intron | 30.0% |
| TAAGGACTATTTCAACATCA+AGG | + | chr4_3:40240314-40240333 | None:intergenic | 30.0% | |
| ! | TGCACAATCATGAACTATTT+TGG | - | chr4_3:40240450-40240469 | Msa0640860:intron | 30.0% |
| TAAATAGTAAAAGGTCCTGT+AGG | + | chr4_3:40240597-40240616 | None:intergenic | 30.0% | |
| GAGGTAATACTATATAGTTG+AGG | - | chr4_3:40240737-40240756 | Msa0640860:CDS | 30.0% | |
| ! | ATTTTCCACAATATCAAGGA+TGG | + | chr4_3:40240797-40240816 | None:intergenic | 30.0% |
| ! | CGTAATTTTCCACAATATCA+AGG | + | chr4_3:40240801-40240820 | None:intergenic | 30.0% |
| TTTCAAGACACTTCATTAGT+TGG | - | chr4_3:40240917-40240936 | Msa0640860:intron | 30.0% | |
| TGGAAATAGCTATCATTTGA+CGG | - | chr4_3:40240937-40240956 | Msa0640860:intron | 30.0% | |
| ! | GATTTTCAAAGTTTGGACAT+GGG | + | chr4_3:40241496-40241515 | None:intergenic | 30.0% |
| ! | TGATTTTCAAAGTTTGGACA+TGG | + | chr4_3:40241497-40241516 | None:intergenic | 30.0% |
| TCATGAATCGTACTGAAATT+AGG | - | chr4_3:40241514-40241533 | Msa0640860:intron | 30.0% | |
| CATGAATCGTACTGAAATTA+GGG | - | chr4_3:40241515-40241534 | Msa0640860:intron | 30.0% | |
| GGTTATTTATCTTAGCAATG+CGG | + | chr4_3:40241678-40241697 | None:intergenic | 30.0% | |
| TCAGTCTTCACATAACTAAA+TGG | + | chr4_3:40241897-40241916 | None:intergenic | 30.0% | |
| ACATCGTTAGTAAATCTTAG+AGG | + | chr4_3:40242062-40242081 | None:intergenic | 30.0% | |
| AAAGCAGTTCTATTTATCAG+AGG | - | chr4_3:40242117-40242136 | Msa0640860:intron | 30.0% | |
| ACTTCATACACACAAAATGA+TGG | + | chr4_3:40242198-40242217 | None:intergenic | 30.0% | |
| TTTGTGTGTATGAAGTTCAT+TGG | - | chr4_3:40242202-40242221 | Msa0640860:intron | 30.0% | |
| GGAATAATCATATCCTTAAG+AGG | - | chr4_3:40242248-40242267 | Msa0640860:intron | 30.0% | |
| ! | ATGTGCAAGATGTGTTATTA+AGG | - | chr4_3:40242312-40242331 | Msa0640860:intron | 30.0% |
| ! | AGATGTGTTATTAAGGACAA+TGG | - | chr4_3:40242319-40242338 | Msa0640860:intron | 30.0% |
| ATTAAGGACAATGGTTTAAC+TGG | - | chr4_3:40242328-40242347 | Msa0640860:intron | 30.0% | |
| TTAAGGACAATGGTTTAACT+GGG | - | chr4_3:40242329-40242348 | Msa0640860:intron | 30.0% | |
| ! | TTCTGACATAATTTGTGTAC+AGG | - | chr4_3:40242482-40242501 | Msa0640860:intron | 30.0% |
| !!! | TCCTTCTTTGTTTTTTGTGA+AGG | - | chr4_3:40242637-40242656 | Msa0640860:intron | 30.0% |
| !!! | CCTTCTTTGTTTTTTGTGAA+GGG | - | chr4_3:40242638-40242657 | Msa0640860:intron | 30.0% |
| !!! | AGCTATCCGTCTTTTTTTAT+TGG | - | chr4_3:40242693-40242712 | Msa0640860:intron | 30.0% |
| AACATTGAGATTAGATTAGC+AGG | + | chr4_3:40242858-40242877 | None:intergenic | 30.0% | |
| TCTCGCAGACAATATAATAT+AGG | + | chr4_3:40242888-40242907 | None:intergenic | 30.0% | |
| TTTAGCATGATTTCAGACAT+AGG | + | chr4_3:40243076-40243095 | None:intergenic | 30.0% | |
| ! | TGAATGAAGATGGTGATTTT+TGG | - | chr4_3:40243224-40243243 | Msa0640860:CDS | 30.0% |
| ! | GAATGAAGATGGTGATTTTT+GGG | - | chr4_3:40243225-40243244 | Msa0640860:CDS | 30.0% |
| !! | ACTATACTGGTTTATATCCA+AGG | - | chr4_3:40243281-40243300 | Msa0640860:CDS | 30.0% |
| !! | AACAGGTATTGATTCTTTGT+TGG | + | chr4_3:40243337-40243356 | None:intergenic | 30.0% |
| AGGTAAATTACTGCAGATAT+TGG | - | chr4_3:40243405-40243424 | Msa0640860:CDS | 30.0% | |
| TAAATTACTGCAGATATTGG+AGG | - | chr4_3:40243408-40243427 | Msa0640860:CDS | 30.0% | |
| AATAATGTACCTTGAGTTCT+TGG | - | chr4_3:40243601-40243620 | Msa0640860:five_prime_UTR | 30.0% | |
| !!! | TGCTTCCATATTGTCTTTTT+TGG | - | chr4_3:40243650-40243669 | Msa0640860:five_prime_UTR | 30.0% |
| TTTGTTTCCCAATGTAAAGG+AGG | + | chr4_3:40239660-40239679 | None:intergenic | 35.0% | |
| GTTTCAATTGAATTGTGGGT+AGG | + | chr4_3:40239718-40239737 | None:intergenic | 35.0% | |
| ! | CAAGAGAAAGATAATGGCAA+AGG | + | chr4_3:40239855-40239874 | None:intergenic | 35.0% |
| CCCTGAATTTGAATCCAAAA+AGG | - | chr4_3:40239928-40239947 | Msa0640860:CDS | 35.0% | |
| ! | CTGATGGTAGAATTTTGTTC+TGG | - | chr4_3:40240098-40240117 | Msa0640860:CDS | 35.0% |
| !!! | GGTAGAATTTTGTTCTGGAA+TGG | - | chr4_3:40240103-40240122 | Msa0640860:CDS | 35.0% |
| !! | GTAAAGGTAGTTTTGCAAGA+AGG | - | chr4_3:40240248-40240267 | Msa0640860:intron | 35.0% |
| !! | AAAGGTAGTTTTGCAAGAAG+GGG | - | chr4_3:40240250-40240269 | Msa0640860:intron | 35.0% |
| ! | TTTTAGTCTCCGAATATGCA+AGG | - | chr4_3:40240282-40240301 | Msa0640860:intron | 35.0% |
| TACTGTTCTATCAATCCCTT+TGG | + | chr4_3:40240386-40240405 | None:intergenic | 35.0% | |
| !! | TAACGGAACATTTTAACACG+AGG | - | chr4_3:40240407-40240426 | Msa0640860:intron | 35.0% |
| !! | AACGGAACATTTTAACACGA+GGG | - | chr4_3:40240408-40240427 | Msa0640860:intron | 35.0% |
| !!! | ACGAGGGACTATTTTGATTA+AGG | - | chr4_3:40240424-40240443 | Msa0640860:intron | 35.0% |
| ! | GTGACTATTTGTTGCACATT+CGG | - | chr4_3:40240498-40240517 | Msa0640860:intron | 35.0% |
| ! | TGACTATTTGTTGCACATTC+GGG | - | chr4_3:40240499-40240518 | Msa0640860:intron | 35.0% |
| TAGTTGAGGGTTGTAAATAG+AGG | - | chr4_3:40240751-40240770 | Msa0640860:CDS | 35.0% | |
| TGGAAAATTACGGTCAAATG+TGG | - | chr4_3:40240809-40240828 | Msa0640860:CDS | 35.0% | |
| AAAACTGTTATGTAGCGGTT+TGG | - | chr4_3:40240869-40240888 | Msa0640860:intron | 35.0% | |
| AGTGTCTTGAAACTCATTGT+TGG | + | chr4_3:40240909-40240928 | None:intergenic | 35.0% | |
| AAATAGCTATCATTTGACGG+AGG | - | chr4_3:40240940-40240959 | Msa0640860:intron | 35.0% | |
| AATAGCTATCATTTGACGGA+GGG | - | chr4_3:40240941-40240960 | Msa0640860:intron | 35.0% | |
| TTAGTTGTTAGAAATGCTGG+TGG | + | chr4_3:40241031-40241050 | None:intergenic | 35.0% | |
| CTTTGAGCAGTTGTATAATC+AGG | - | chr4_3:40241102-40241121 | Msa0640860:intron | 35.0% | |
| AAAAGGGTTGAACAAATTGC+TGG | + | chr4_3:40241212-40241231 | None:intergenic | 35.0% | |
| TTGATTATCACAGGCAAAGT+TGG | - | chr4_3:40241584-40241603 | Msa0640860:intron | 35.0% | |
| TGATTATCACAGGCAAAGTT+GGG | - | chr4_3:40241585-40241604 | Msa0640860:intron | 35.0% | |
| CAGTTAGGACACTTTAATGT+AGG | - | chr4_3:40241631-40241650 | Msa0640860:intron | 35.0% | |
| CTTGCAATGGCATGATTAAA+TGG | - | chr4_3:40241803-40241822 | Msa0640860:intron | 35.0% | |
| CTCAGATTTGACAAGAAAAC+AGG | - | chr4_3:40241942-40241961 | Msa0640860:intron | 35.0% | |
| TACATTGCAGATGCATATCT+TGG | - | chr4_3:40241972-40241991 | Msa0640860:intron | 35.0% | |
| ACATTGCAGATGCATATCTT+GGG | - | chr4_3:40241973-40241992 | Msa0640860:intron | 35.0% | |
| AACATGTGATAACTGCATGA+AGG | - | chr4_3:40242226-40242245 | Msa0640860:intron | 35.0% | |
| ACATGTGATAACTGCATGAA+GGG | - | chr4_3:40242227-40242246 | Msa0640860:intron | 35.0% | |
| ACCTGCATATATAAGTTTCG+TGG | - | chr4_3:40242278-40242297 | Msa0640860:intron | 35.0% | |
| TCCACGAAACTTATATATGC+AGG | + | chr4_3:40242282-40242301 | None:intergenic | 35.0% | |
| ! | CTGGGATGATTATTGAGTTT+TGG | - | chr4_3:40242347-40242366 | Msa0640860:intron | 35.0% |
| TTGCTTAAGGAAATGCCATT+CGG | + | chr4_3:40242610-40242629 | None:intergenic | 35.0% | |
| CCCTTCACAAAAAACAAAGA+AGG | + | chr4_3:40242641-40242660 | None:intergenic | 35.0% | |
| !!! | GTTTTTTGTGAAGGGTCTAT+TGG | - | chr4_3:40242646-40242665 | Msa0640860:intron | 35.0% |
| ! | ATTTTACAATTGTCTCCGAG+AGG | + | chr4_3:40242975-40242994 | None:intergenic | 35.0% |
| CTGGTTTATATCCAAGGATA+AGG | - | chr4_3:40243287-40243306 | Msa0640860:CDS | 35.0% | |
| ! | TTGTTGGTATTGGAAGCTTA+AGG | + | chr4_3:40243321-40243340 | None:intergenic | 35.0% |
| ATTGTGAAGTATAGTCCTGA+AGG | - | chr4_3:40243385-40243404 | Msa0640860:CDS | 35.0% | |
| ATCTGCAGTAATTTACCTTC+AGG | + | chr4_3:40243403-40243422 | None:intergenic | 35.0% | |
| TTTATTCCACCAAGAACTCA+AGG | + | chr4_3:40243613-40243632 | None:intergenic | 35.0% | |
| AGCTACTCCTCCTTTACATT+GGG | - | chr4_3:40239650-40239669 | Msa0640860:three_prime_UTR | 40.0% | |
| AATTGAATTGTGGGTAGGTG+AGG | + | chr4_3:40239713-40239732 | None:intergenic | 40.0% | |
| ! | CTCTTGTTTGCTCTATACTG+TGG | - | chr4_3:40239869-40239888 | Msa0640860:CDS | 40.0% |
| GTTTGCTCTATACTGTGGTT+TGG | - | chr4_3:40239874-40239893 | Msa0640860:CDS | 40.0% | |
| CTATGGTACTGTGCTGAAAT+GGG | + | chr4_3:40239901-40239920 | None:intergenic | 40.0% | |
| ! | ATCAGGCATGTCAACCTTTT+TGG | + | chr4_3:40239945-40239964 | None:intergenic | 40.0% |
| AAAAGGTTGACATGCCTGAT+TGG | - | chr4_3:40239945-40239964 | Msa0640860:CDS | 40.0% | |
| !! | TGTTCTGGAATGGACTTTCT+TGG | - | chr4_3:40240113-40240132 | Msa0640860:CDS | 40.0% |
| !! | GTTCTGGAATGGACTTTCTT+GGG | - | chr4_3:40240114-40240133 | Msa0640860:CDS | 40.0% |
| TTAACCTTACCTATTAGGCG+AGG | + | chr4_3:40240155-40240174 | None:intergenic | 40.0% | |
| AGGACTACTCCTTGCATATT+CGG | + | chr4_3:40240294-40240313 | None:intergenic | 40.0% | |
| ! | GACTATTTGTTGCACATTCG+GGG | - | chr4_3:40240500-40240519 | Msa0640860:intron | 40.0% |
| AGGGTTGTAAATAGAGGTCA+TGG | - | chr4_3:40240757-40240776 | Msa0640860:CDS | 40.0% | |
| TGTCACCATCCTTGATATTG+TGG | - | chr4_3:40240789-40240808 | Msa0640860:CDS | 40.0% | |
| !!! | GTTATGTAGCGGTTTGGTTT+TGG | - | chr4_3:40240875-40240894 | Msa0640860:intron | 40.0% |
| ATAGCTATCATTTGACGGAG+GGG | - | chr4_3:40240942-40240961 | Msa0640860:intron | 40.0% | |
| AGAAAGTAGAGGTTGGACTT+TGG | - | chr4_3:40240975-40240994 | Msa0640860:intron | 40.0% | |
| TTGTTAGAAATGCTGGTGGA+GGG | + | chr4_3:40241027-40241046 | None:intergenic | 40.0% | |
| CGTTGCGGTTACAAGTAAAA+GGG | + | chr4_3:40241349-40241368 | None:intergenic | 40.0% | |
| TCGTTGCGGTTACAAGTAAA+AGG | + | chr4_3:40241350-40241369 | None:intergenic | 40.0% | |
| ! | GTGAAAGGAAGGTATAGACA+GGG | + | chr4_3:40241395-40241414 | None:intergenic | 40.0% |
| ! | AGTGAAAGGAAGGTATAGAC+AGG | + | chr4_3:40241396-40241415 | None:intergenic | 40.0% |
| TGATAGAAGAGAACCAACAG+TGG | - | chr4_3:40241459-40241478 | Msa0640860:CDS | 40.0% | |
| GAAGAGAATAACCACGTAAG+TGG | - | chr4_3:40241546-40241565 | Msa0640860:intron | 40.0% | |
| ACCACGTAAGTGGTATTTGA+TGG | - | chr4_3:40241556-40241575 | Msa0640860:intron | 40.0% | |
| TCCATCAAATACCACTTACG+TGG | + | chr4_3:40241560-40241579 | None:intergenic | 40.0% | |
| TTGGCAAAAGTCTCTTGCAA+TGG | - | chr4_3:40241790-40241809 | Msa0640860:intron | 40.0% | |
| !! | AATGGTGTCGCATTTGCTAT+GGG | + | chr4_3:40241879-40241898 | None:intergenic | 40.0% |
| !! | AAATGGTGTCGCATTTGCTA+TGG | + | chr4_3:40241880-40241899 | None:intergenic | 40.0% |
| TTGTCAAATCTGAGTCCCAA+AGG | + | chr4_3:40241936-40241955 | None:intergenic | 40.0% | |
| !! | GATGTCGATGTTGATTCAGA+AGG | - | chr4_3:40242077-40242096 | Msa0640860:intron | 40.0% |
| GCAGTTCTATTTATCAGAGG+AGG | - | chr4_3:40242120-40242139 | Msa0640860:intron | 40.0% | |
| ! | TTCATGCAGCTGGTATTTTC+TGG | - | chr4_3:40242508-40242527 | Msa0640860:intron | 40.0% |
| ! | TCATGCAGCTGGTATTTTCT+GGG | - | chr4_3:40242509-40242528 | Msa0640860:intron | 40.0% |
| !! | GTATTTTCTGGGGATGATAG+TGG | - | chr4_3:40242520-40242539 | Msa0640860:intron | 40.0% |
| GAAATACAACCCTGCAACAA+AGG | - | chr4_3:40242552-40242571 | Msa0640860:intron | 40.0% | |
| TGCTTAAGGAAATGCCATTC+GGG | + | chr4_3:40242609-40242628 | None:intergenic | 40.0% | |
| GGCATTTCCTTAAGCAAAGA+TGG | - | chr4_3:40242613-40242632 | Msa0640860:intron | 40.0% | |
| GAAGGAACCATCTTTGCTTA+AGG | + | chr4_3:40242623-40242642 | None:intergenic | 40.0% | |
| GACGGATAGCTAAAGAAGTA+AGG | + | chr4_3:40242684-40242703 | None:intergenic | 40.0% | |
| AAAAATGGGGAAGAAGGAGA+TGG | + | chr4_3:40243023-40243042 | None:intergenic | 40.0% | |
| TGGTTAAAAGGAGAAAAGGC+TGG | - | chr4_3:40243151-40243170 | Msa0640860:intron | 40.0% | |
| GGTTAAAAGGAGAAAAGGCT+GGG | - | chr4_3:40243152-40243171 | Msa0640860:intron | 40.0% | |
| TTCATTCACCCTCACATTGT+CGG | + | chr4_3:40243212-40243231 | None:intergenic | 40.0% | |
| AATGTGAGGGTGAATGAAGA+TGG | - | chr4_3:40243214-40243233 | Msa0640860:intron | 40.0% | |
| !! | TGAAGATGGTGATTTTTGGG+TGG | - | chr4_3:40243228-40243247 | Msa0640860:CDS | 40.0% |
| AGGATAGCTTTCCTTATCCT+TGG | + | chr4_3:40243301-40243320 | None:intergenic | 40.0% | |
| CAATACCTGTTTCAAATCGG+AGG | - | chr4_3:40243346-40243365 | Msa0640860:CDS | 40.0% | |
| AGTGAAGTGGAAGAGAAAGA+CGG | - | chr4_3:40243460-40243479 | Msa0640860:CDS | 40.0% | |
| AAGAGAAAGACGGTCAACTT+TGG | - | chr4_3:40243470-40243489 | Msa0640860:CDS | 40.0% | |
| AAAGACGGTCAACTTTGGAT+TGG | - | chr4_3:40243475-40243494 | Msa0640860:CDS | 40.0% | |
| GTGATAGAGCTGAAGATCAA+AGG | + | chr4_3:40243555-40243574 | None:intergenic | 40.0% | |
| TTGATCTTCAGCTCTATCAC+AGG | - | chr4_3:40243555-40243574 | Msa0640860:five_prime_UTR | 40.0% | |
| AATGTACCTTGAGTTCTTGG+TGG | - | chr4_3:40243604-40243623 | Msa0640860:five_prime_UTR | 40.0% | |
| GAGCTACTCCTCCTTTACAT+TGG | - | chr4_3:40239649-40239668 | Msa0640860:three_prime_UTR | 45.0% | |
| GCTATGGTACTGTGCTGAAA+TGG | + | chr4_3:40239902-40239921 | None:intergenic | 45.0% | |
| TTAGGAACCTCAGACCAATC+AGG | + | chr4_3:40239962-40239981 | None:intergenic | 45.0% | |
| AGCATTGTGTTTGACCCTCT+TGG | - | chr4_3:40240052-40240071 | Msa0640860:CDS | 45.0% | |
| TATAAGGACCACGACCAAGA+GGG | + | chr4_3:40240069-40240088 | None:intergenic | 45.0% | |
| CCATCAGCAACACCAGTATA+AGG | + | chr4_3:40240085-40240104 | None:intergenic | 45.0% | |
| !! | CCTTATACTGGTGTTGCTGA+TGG | - | chr4_3:40240082-40240101 | Msa0640860:CDS | 45.0% |
| TTGCTTACACCTCGCCTAAT+AGG | - | chr4_3:40240143-40240162 | Msa0640860:CDS | 45.0% | |
| TACACCTCGCCTAATAGGTA+AGG | - | chr4_3:40240148-40240167 | Msa0640860:CDS | 45.0% | |
| CCACAATGTGACTGCAATTG+AGG | + | chr4_3:40240835-40240854 | None:intergenic | 45.0% | |
| CCTCAATTGCAGTCACATTG+TGG | - | chr4_3:40240832-40240851 | Msa0640860:CDS | 45.0% | |
| TATCATTTGACGGAGGGGTT+TGG | - | chr4_3:40240947-40240966 | Msa0640860:intron | 45.0% | |
| ATCATTTGACGGAGGGGTTT+GGG | - | chr4_3:40240948-40240967 | Msa0640860:intron | 45.0% | |
| GTTGTTAGAAATGCTGGTGG+AGG | + | chr4_3:40241028-40241047 | None:intergenic | 45.0% | |
| ! | GAAGGTACAAGTAGGGCTTA+TGG | + | chr4_3:40241373-40241392 | None:intergenic | 45.0% |
| ! | AGACAGGGAAGGTACAAGTA+GGG | + | chr4_3:40241380-40241399 | None:intergenic | 45.0% |
| ! | TAGACAGGGAAGGTACAAGT+AGG | + | chr4_3:40241381-40241400 | None:intergenic | 45.0% |
| ! | AAGGAAGGTATAGACAGGGA+AGG | + | chr4_3:40241391-40241410 | None:intergenic | 45.0% |
| AGGCAAAGTTGGGTAGTTCA+CGG | - | chr4_3:40241595-40241614 | Msa0640860:intron | 45.0% | |
| GTGAAGACTGAGCACATATG+TGG | - | chr4_3:40241906-40241925 | Msa0640860:intron | 45.0% | |
| AGACTGAGCACATATGTGGA+AGG | - | chr4_3:40241910-40241929 | Msa0640860:intron | 45.0% | |
| CACATATGTGGAAGGCCTTT+GGG | - | chr4_3:40241918-40241937 | Msa0640860:intron | 45.0% | |
| TGCATATCTTGGGCTGTTGA+AGG | - | chr4_3:40241983-40242002 | Msa0640860:intron | 45.0% | |
| ATATCTTGGGCTGTTGAAGG+TGG | - | chr4_3:40241986-40242005 | Msa0640860:intron | 45.0% | |
| TATCTTGGGCTGTTGAAGGT+GGG | - | chr4_3:40241987-40242006 | Msa0640860:intron | 45.0% | |
| AGATGTTGCTAAACCTCCCT+CGG | + | chr4_3:40242015-40242034 | None:intergenic | 45.0% | |
| AGCAACATCTCTTGCAACTG+AGG | - | chr4_3:40242025-40242044 | Msa0640860:intron | 45.0% | |
| GTACAGGAATTTCATGCAGC+TGG | - | chr4_3:40242498-40242517 | Msa0640860:intron | 45.0% | |
| ! | CATGCAGCTGGTATTTTCTG+GGG | - | chr4_3:40242510-40242529 | Msa0640860:intron | 45.0% |
| !! | TTCTGGGGATGATAGTGGAA+AGG | - | chr4_3:40242525-40242544 | Msa0640860:intron | 45.0% |
| AACATCCCTCACTAGAACAG+CGG | + | chr4_3:40242581-40242600 | None:intergenic | 45.0% | |
| AGGGATGTTCAATTCCCGAA+TGG | - | chr4_3:40242592-40242611 | Msa0640860:intron | 45.0% | |
| TTTGTGAAGGGTCTATTGGC+AGG | - | chr4_3:40242650-40242669 | Msa0640860:intron | 45.0% | |
| GTCATGTCAGCTTAGTCAAG+TGG | - | chr4_3:40242909-40242928 | Msa0640860:intron | 45.0% | |
| AGTTTGATCAGTAGCCGCAA+GGG | - | chr4_3:40242936-40242955 | Msa0640860:intron | 45.0% | |
| GATTTGGATACTGTCCCTTG+CGG | + | chr4_3:40242953-40242972 | None:intergenic | 45.0% | |
| GGACAGTATCCAAATCCTCT+CGG | - | chr4_3:40242957-40242976 | Msa0640860:intron | 45.0% | |
| CAATTGTCTCCGAGAGGATT+TGG | + | chr4_3:40242969-40242988 | None:intergenic | 45.0% | |
| GAGATCTTAGCTATCCTACC+TGG | - | chr4_3:40243181-40243200 | Msa0640860:intron | 45.0% | |
| TCATTCACCCTCACATTGTC+GGG | + | chr4_3:40243211-40243230 | None:intergenic | 45.0% | |
| ! | GCTTACCTCCGATTTGAAAC+AGG | + | chr4_3:40243354-40243373 | None:intergenic | 45.0% |
| CAAATCGGAGGTAAGCAACA+TGG | - | chr4_3:40243358-40243377 | Msa0640860:CDS | 45.0% | |
| CAGATATTGGAGGACAGTGA+GGG | - | chr4_3:40243418-40243437 | Msa0640860:CDS | 45.0% | |
| TGTTAGAGCTGTGAGTGAAG+TGG | - | chr4_3:40243447-40243466 | Msa0640860:CDS | 45.0% | |
| ATGGAAGCAAAGCTCATCTC+AGG | + | chr4_3:40243639-40243658 | None:intergenic | 45.0% | |
| !! | AATTTAAAAAATATGAAATT+CGG | + | chr4_3:40242174-40242193 | None:intergenic | 5.0% |
| !! | TGACATGCCTGATTGGTCTG+AGG | - | chr4_3:40239952-40239971 | Msa0640860:CDS | 50.0% |
| GGGTCAAACACAATGCTCTC+AGG | + | chr4_3:40240049-40240068 | None:intergenic | 50.0% | |
| GTATAAGGACCACGACCAAG+AGG | + | chr4_3:40240070-40240089 | None:intergenic | 50.0% | |
| CTTGGTCGTGGTCCTTATAC+TGG | - | chr4_3:40240070-40240089 | Msa0640860:CDS | 50.0% | |
| !!! | TAGCGGTTTGGTTTTGGTCG+CGG | - | chr4_3:40240881-40240900 | Msa0640860:intron | 50.0% |
| TCATTTGACGGAGGGGTTTG+GGG | - | chr4_3:40240949-40240968 | Msa0640860:intron | 50.0% | |
| GTTTGGGGGACAGAAAGTAG+AGG | - | chr4_3:40240964-40240983 | Msa0640860:intron | 50.0% | |
| GCTGGCATTCACTGTTCTGT+AGG | + | chr4_3:40241194-40241213 | None:intergenic | 50.0% | |
| AGTAGGGCTTATGGTCGTTG+CGG | + | chr4_3:40241364-40241383 | None:intergenic | 50.0% | |
| ! | GGCTAGCTCAACTCACAGTT+AGG | - | chr4_3:40241616-40241635 | Msa0640860:intron | 50.0% |
| GCACATATGTGGAAGGCCTT+TGG | - | chr4_3:40241917-40241936 | Msa0640860:intron | 50.0% | |
| ATCTTGGGCTGTTGAAGGTG+GGG | - | chr4_3:40241988-40242007 | Msa0640860:intron | 50.0% | |
| GATGTTGCTAAACCTCCCTC+GGG | + | chr4_3:40242014-40242033 | None:intergenic | 50.0% | |
| TCTCTTGCAACTGAGGCTGA+AGG | - | chr4_3:40242032-40242051 | Msa0640860:intron | 50.0% | |
| CTCTTGCAACTGAGGCTGAA+GGG | - | chr4_3:40242033-40242052 | Msa0640860:intron | 50.0% | |
| TCTTGCAACTGAGGCTGAAG+GGG | - | chr4_3:40242034-40242053 | Msa0640860:intron | 50.0% | |
| GCAGGTTAAGTGCCCTCTTA+AGG | + | chr4_3:40242264-40242283 | None:intergenic | 50.0% | |
| CAGCGGTTTCCTTTGTTGCA+GGG | + | chr4_3:40242564-40242583 | None:intergenic | 50.0% | |
| ACAGCGGTTTCCTTTGTTGC+AGG | + | chr4_3:40242565-40242584 | None:intergenic | 50.0% | |
| AGGAAACCGCTGTTCTAGTG+AGG | - | chr4_3:40242572-40242591 | Msa0640860:intron | 50.0% | |
| GGAAACCGCTGTTCTAGTGA+GGG | - | chr4_3:40242573-40242592 | Msa0640860:intron | 50.0% | |
| TGAAGGGTCTATTGGCAGGT+CGG | - | chr4_3:40242654-40242673 | Msa0640860:intron | 50.0% | |
| GAGTTTGATCAGTAGCCGCA+AGG | - | chr4_3:40242935-40242954 | Msa0640860:intron | 50.0% | |
| AGGAGAAAAGGCTGGGACAT+CGG | - | chr4_3:40243159-40243178 | Msa0640860:intron | 50.0% | |
| GCAGATATTGGAGGACAGTG+AGG | - | chr4_3:40243417-40243436 | Msa0640860:CDS | 50.0% | |
| GAGGTAGCAAGCAACGTGTG+TGG | + | chr4_3:40239694-40239713 | None:intergenic | 55.0% | |
| GTGTTTGACCCTCTTGGTCG+TGG | - | chr4_3:40240058-40240077 | Msa0640860:CDS | 55.0% | |
| CATTTGACGGAGGGGTTTGG+GGG | - | chr4_3:40240950-40240969 | Msa0640860:intron | 55.0% | |
| GGGGGACAGAAAGTAGAGGT+TGG | - | chr4_3:40240968-40240987 | Msa0640860:intron | 55.0% | |
| GGCTTGTGACATGCCACTGT+TGG | + | chr4_3:40241475-40241494 | None:intergenic | 55.0% | |
| TGGAGCTCCCGACAATGTGA+GGG | - | chr4_3:40243201-40243220 | Msa0640860:intron | 55.0% | |
| CATTGTCGGGAGCTCCAGGT+AGG | + | chr4_3:40243198-40243217 | None:intergenic | 60.0% | |
| CTCACATTGTCGGGAGCTCC+AGG | + | chr4_3:40243202-40243221 | None:intergenic | 60.0% | |
| CTGGAGCTCCCGACAATGTG+AGG | - | chr4_3:40243200-40243219 | Msa0640860:intron | 60.0% | |
| CTGTTGAAGGTGGGGCCCGA+GGG | - | chr4_3:40241996-40242015 | Msa0640860:intron | 65.0% | |
| GCTGTTGAAGGTGGGGCCCG+AGG | - | chr4_3:40241995-40242014 | Msa0640860:intron | 70.0% | |
| TTGAAGGTGGGGCCCGAGGG+AGG | - | chr4_3:40241999-40242018 | Msa0640860:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 40239647 | 40243734 | 40239647 | ID=Msa0640860;Name=Msa0640860 |
| chr4_3 | mRNA | 40239647 | 40243734 | 40239647 | ID=Msa0640860-mRNA-1;Parent=Msa0640860;Name=Msa0640860-mRNA-1;_AED=0.03;_eAED=0.03;_QI=189|1|1|1|1|1|4|197|391 |
| chr4_3 | exon | 40239647 | 40240243 | 40239647 | ID=Msa0640860-mRNA-1:exon:9049;Parent=Msa0640860-mRNA-1 |
| chr4_3 | exon | 40240710 | 40240877 | 40240710 | ID=Msa0640860-mRNA-1:exon:9048;Parent=Msa0640860-mRNA-1 |
| chr4_3 | exon | 40241240 | 40241518 | 40241240 | ID=Msa0640860-mRNA-1:exon:9047;Parent=Msa0640860-mRNA-1 |
| chr4_3 | exon | 40243217 | 40243734 | 40243217 | ID=Msa0640860-mRNA-1:exon:9046;Parent=Msa0640860-mRNA-1 |
| chr4_3 | five_prime_UTR | 40243546 | 40243734 | 40243546 | ID=Msa0640860-mRNA-1:five_prime_utr;Parent=Msa0640860-mRNA-1 |
| chr4_3 | CDS | 40243217 | 40243545 | 40243217 | ID=Msa0640860-mRNA-1:cds;Parent=Msa0640860-mRNA-1 |
| chr4_3 | CDS | 40241240 | 40241518 | 40241240 | ID=Msa0640860-mRNA-1:cds;Parent=Msa0640860-mRNA-1 |
| chr4_3 | CDS | 40240710 | 40240877 | 40240710 | ID=Msa0640860-mRNA-1:cds;Parent=Msa0640860-mRNA-1 |
| chr4_3 | CDS | 40239844 | 40240243 | 40239844 | ID=Msa0640860-mRNA-1:cds;Parent=Msa0640860-mRNA-1 |
| chr4_3 | three_prime_UTR | 40239647 | 40239843 | 40239647 | ID=Msa0640860-mRNA-1:three_prime_utr;Parent=Msa0640860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
