Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150700 | XP_003623156.1 | 96.452 | 310 | 10 | 1 | 1 | 310 | 1 | 309 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150700 | sp|Q9M330|PSMF1_ARATH | 55.082 | 305 | 123 | 7 | 1 | 301 | 1 | 295 | 2.20e-90 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150700 | G7L5K7 | 96.452 | 310 | 10 | 1 | 1 | 310 | 1 | 309 | 0.0 | 599 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa1150700 | -0.813409 | 2.597484e-51 | -8.615850e-47 |
| Msa0028640 | Msa1150700 | -0.800463 | 1.424274e-48 | -8.615850e-47 |
| Msa0072900 | Msa1150700 | -0.802763 | 4.807176e-49 | -8.615850e-47 |
| Msa0074240 | Msa1150700 | -0.813223 | 2.854283e-51 | -8.615850e-47 |
| Msa0094140 | Msa1150700 | -0.810956 | 8.908158e-51 | -8.615850e-47 |
| Msa0101810 | Msa1150700 | 0.833719 | 4.537678e-56 | -8.615850e-47 |
| Msa0110970 | Msa1150700 | -0.806528 | 7.873292e-50 | -8.615850e-47 |
| Msa0626510 | Msa1150700 | -0.807062 | 6.073666e-50 | -8.615850e-47 |
| Msa0679290 | Msa1150700 | 0.805779 | 1.132009e-49 | -8.615850e-47 |
| Msa0691980 | Msa1150700 | -0.806117 | 9.610843e-50 | -8.615850e-47 |
| Msa0754520 | Msa1150700 | -0.806027 | 1.004086e-49 | -8.615850e-47 |
| Msa0828560 | Msa1150700 | -0.811937 | 5.453883e-51 | -8.615850e-47 |
| Msa0833220 | Msa1150700 | -0.804966 | 1.675616e-49 | -8.615850e-47 |
| Msa0157290 | Msa1150700 | -0.813839 | 2.089211e-51 | -8.615850e-47 |
| Msa0215320 | Msa1150700 | 0.817044 | 4.044693e-52 | -8.615850e-47 |
| Msa0225760 | Msa1150700 | -0.817418 | 3.332730e-52 | -8.615850e-47 |
| Msa0381290 | Msa1150700 | -0.801956 | 7.049264e-49 | -8.615850e-47 |
| Msa0388960 | Msa1150700 | -0.807552 | 4.779699e-50 | -8.615850e-47 |
| Msa0392510 | Msa1150700 | -0.814494 | 1.497282e-51 | -8.615850e-47 |
| Msa0410650 | Msa1150700 | -0.815463 | 9.126390e-52 | -8.615850e-47 |
| Msa0417270 | Msa1150700 | -0.803534 | 3.330592e-49 | -8.615850e-47 |
| Msa0417880 | Msa1150700 | -0.829326 | 5.480430e-55 | -8.615850e-47 |
| Msa0422850 | Msa1150700 | -0.804472 | 2.125370e-49 | -8.615850e-47 |
| Msa0422930 | Msa1150700 | -0.802840 | 4.635854e-49 | -8.615850e-47 |
| Msa0464680 | Msa1150700 | -0.800103 | 1.686364e-48 | -8.615850e-47 |
| Msa1000300 | Msa1150700 | -0.800592 | 1.340446e-48 | -8.615850e-47 |
| Msa1038990 | Msa1150700 | -0.808628 | 2.820896e-50 | -8.615850e-47 |
| Msa1085200 | Msa1150700 | -0.809939 | 1.476539e-50 | -8.615850e-47 |
| Msa1104370 | Msa1150700 | -0.802166 | 6.383736e-49 | -8.615850e-47 |
| Msa0261340 | Msa1150700 | -0.825550 | 4.410395e-54 | -8.615850e-47 |
| Msa0283450 | Msa1150700 | -0.801585 | 8.398707e-49 | -8.615850e-47 |
| Msa0283520 | Msa1150700 | -0.800651 | 1.304297e-48 | -8.615850e-47 |
| Msa0300690 | Msa1150700 | -0.806192 | 9.270590e-50 | -8.615850e-47 |
| Msa0330340 | Msa1150700 | -0.816652 | 4.952021e-52 | -8.615850e-47 |
| Msa0332000 | Msa1150700 | -0.803410 | 3.532802e-49 | -8.615850e-47 |
| Msa0336040 | Msa1150700 | 0.807395 | 5.161796e-50 | -8.615850e-47 |
| Msa1113170 | Msa1150700 | -0.803977 | 2.694388e-49 | -8.615850e-47 |
| Msa1150700 | Msa1199830 | 0.816095 | 6.596936e-52 | -8.615850e-47 |
| Msa1150700 | Msa1238930 | -0.809855 | 1.539023e-50 | -8.615850e-47 |
| Msa1150700 | Msa1313150 | -0.805640 | 1.211022e-49 | -8.615850e-47 |
| Msa1150700 | Msa1346370 | -0.805416 | 1.348952e-49 | -8.615850e-47 |
| Msa1150700 | Msa1364470 | 0.825409 | 4.762070e-54 | -8.615850e-47 |
| Msa1150700 | Msa1407640 | 0.817694 | 2.887913e-52 | -8.615850e-47 |
| Msa1150700 | Msa1423350 | -0.805416 | 1.348875e-49 | -8.615850e-47 |
| Msa1150700 | Msa1423880 | -0.837009 | 6.693754e-57 | -8.615850e-47 |
| Msa0507680 | Msa1150700 | -0.805013 | 1.638142e-49 | -8.615850e-47 |
| Msa0569200 | Msa1150700 | -0.804661 | 1.940994e-49 | -8.615850e-47 |
| Msa0574890 | Msa1150700 | -0.829761 | 4.294986e-55 | -8.615850e-47 |
| Msa0601750 | Msa1150700 | -0.811063 | 8.444909e-51 | -8.615850e-47 |
| Msa0867890 | Msa1150700 | -0.805130 | 1.548553e-49 | -8.615850e-47 |
| Msa0880140 | Msa1150700 | -0.812119 | 4.977665e-51 | -8.615850e-47 |
| Msa0897330 | Msa1150700 | -0.801817 | 7.529166e-49 | -8.615850e-47 |
| Msa0924540 | Msa1150700 | -0.811867 | 5.647819e-51 | -8.615850e-47 |
| Msa0930830 | Msa1150700 | 0.825302 | 5.048117e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150700 | MtrunA17_Chr7g0240401 | 96.452 | 310 | 10 | 1 | 1 | 310 | 1 | 309 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150700 | AT3G53970.1 | 55.082 | 305 | 123 | 7 | 1 | 301 | 1 | 295 | 2.23e-91 | 274 |
| Msa1150700 | AT3G53970.2 | 55.242 | 248 | 99 | 6 | 1 | 244 | 1 | 240 | 7.19e-81 | 246 |
| Msa1150700 | AT1G48530.1 | 50.323 | 155 | 71 | 3 | 1 | 153 | 12 | 162 | 8.32e-43 | 145 |
Find 112 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAGCAGTTCAAGAATT+TGG | 0.147688 | 7_4:+34495220 | Msa1150700:CDS |
| TCTGAACCTGTTCCTGGATT+TGG | 0.278596 | 7_4:+34497091 | Msa1150700:CDS |
| GGTGGTACTGGTGGAGGTAT+TGG | 0.283459 | 7_4:+34498338 | Msa1150700:CDS |
| GGTGGAGGACCTGGTGTTAT+TGG | 0.286679 | 7_4:+34498359 | Msa1150700:CDS |
| CTTCGGAAATGTTGCAAATC+TGG | 0.294350 | 7_4:-34499097 | None:intergenic |
| GCATCAAATCCTGGCCTTCT+AGG | 0.308520 | 7_4:-34499070 | None:intergenic |
| CCTCCAGTTCCCGCTGGTTC+TGG | 0.313313 | 7_4:+34498105 | Msa1150700:CDS |
| GAGACATCTGAACCTGTTCC+TGG | 0.327557 | 7_4:+34497085 | Msa1150700:CDS |
| CACTCTTCTTTCCTCGCTTC+CGG | 0.328457 | 7_4:+34493251 | Msa1150700:CDS |
| CTTGTTCATGCTTTGTCTCA+AGG | 0.338872 | 7_4:+34493555 | Msa1150700:CDS |
| TGCGTTTGTTTACGCGAATT+CGG | 0.339122 | 7_4:+34493476 | Msa1150700:CDS |
| CGTTGGTTTGGTGGTGGTAC+TGG | 0.356993 | 7_4:+34498326 | Msa1150700:CDS |
| ATGAGGTTTCTGTTGATCAT+TGG | 0.389212 | 7_4:+34493433 | Msa1150700:CDS |
| ATTGGACCTCCTGGTGTCCC+TGG | 0.390936 | 7_4:+34498831 | Msa1150700:CDS |
| CTACCAGAACCAGCGGGAAC+TGG | 0.400719 | 7_4:-34498108 | None:intergenic |
| TCTAAATAGGGGTGTTCCAC+CGG | 0.400965 | 7_4:+34498791 | Msa1150700:intron |
| TTGTCATATTCATATGGAAA+TGG | 0.411752 | 7_4:-34499178 | None:intergenic |
| TTGTTCATGCTTTGTCTCAA+GGG | 0.414533 | 7_4:+34493556 | Msa1150700:CDS |
| TTCAGGGGTGATCATGACTT+TGG | 0.415046 | 7_4:+34498272 | Msa1150700:intron |
| CCTGGATTTGGTGAACCTGC+TGG | 0.419436 | 7_4:+34497103 | Msa1150700:CDS |
| GGAGGTATTGGTGGAGGACC+TGG | 0.422408 | 7_4:+34498350 | Msa1150700:CDS |
| TTTGGTGGTGGTACTGGTGG+AGG | 0.425441 | 7_4:+34498332 | Msa1150700:CDS |
| GGTACTGGTGGAGGTATTGG+TGG | 0.429040 | 7_4:+34498341 | Msa1150700:CDS |
| GCTCTTTCCAACCCCTCTAA+TGG | 0.431340 | 7_4:+34493317 | Msa1150700:CDS |
| AGTACCACCACCAAACCAAC+GGG | 0.435240 | 7_4:-34498324 | None:intergenic |
| GTTAAATGTCTTGTCATGAA+TGG | 0.435500 | 7_4:+34493525 | Msa1150700:CDS |
| ATCCTATTGTCATATTCATA+TGG | 0.441447 | 7_4:-34499184 | None:intergenic |
| GGTCCTCATGATTATCACCC+TGG | 0.447420 | 7_4:+34497124 | Msa1150700:CDS |
| GGTGTAAGTGTGGGTGTGTT+TGG | 0.448735 | 7_4:-34493057 | None:intergenic |
| TTCCATATGAATATGACAAT+AGG | 0.455918 | 7_4:+34499182 | Msa1150700:three_prime_UTR |
| CTTAGTTGATGAGCTGGCAT+TGG | 0.455986 | 7_4:-34495297 | None:intergenic |
| AGGGTTACCATTAGAGGGGT+TGG | 0.458672 | 7_4:-34493324 | None:intergenic |
| CTCAACCATACCTAGCAAAT+CGG | 0.461116 | 7_4:-34498866 | None:intergenic |
| AATCGGTTGGGCTCAAAACC+AGG | 0.467880 | 7_4:-34498849 | None:intergenic |
| GATTTGTCGGTGGCCATTGT+TGG | 0.473746 | 7_4:-34493158 | None:intergenic |
| TGCAGTGTTGGGGACTATGC+TGG | 0.477094 | 7_4:+34495176 | Msa1150700:intron |
| TATCTTGCAGGAATCCTAGA+AGG | 0.477546 | 7_4:+34499056 | Msa1150700:intron |
| TTTGATCCCATTGGACCTCC+TGG | 0.479048 | 7_4:+34498822 | Msa1150700:CDS |
| TTAAATGTCTTGTCATGAAT+GGG | 0.485044 | 7_4:+34493526 | Msa1150700:CDS |
| TTACCTCTTAGTTGATGAGC+TGG | 0.488473 | 7_4:-34495303 | None:intergenic |
| GGGGACTATGCTGGAGAAGA+TGG | 0.489081 | 7_4:+34495185 | Msa1150700:CDS |
| TGCAGGAATCCTAGAAGGCC+AGG | 0.491835 | 7_4:+34499061 | Msa1150700:intron |
| AATCTGAATCAGTGTCTCTT+CGG | 0.495313 | 7_4:-34499114 | None:intergenic |
| GGTTCACCAAATCCAGGAAC+AGG | 0.496223 | 7_4:-34497097 | None:intergenic |
| GGGGTTGGAAAGAGCGGTAT+CGG | 0.498266 | 7_4:-34493309 | None:intergenic |
| TCAACACTGTAATTAGCAAA+AGG | 0.502028 | 7_4:-34499338 | None:intergenic |
| GGTTACATCCTCACCGCCAC+TGG | 0.502243 | 7_4:+34493272 | Msa1150700:CDS |
| GTTCAAGAATTTGGACAAGC+TGG | 0.510147 | 7_4:+34495229 | Msa1150700:CDS |
| TACTGCGAGGACTGATTTGT+CGG | 0.514155 | 7_4:-34493171 | None:intergenic |
| GGCTCAAAACCAGGGACACC+AGG | 0.514793 | 7_4:-34498840 | None:intergenic |
| TGTTTACGCGAATTCGGAGA+AGG | 0.516934 | 7_4:+34493482 | Msa1150700:CDS |
| GGACCTGGTGTTATTGGAGG+AGG | 0.517117 | 7_4:+34498365 | Msa1150700:CDS |
| GGGACACCAGGAGGTCCAAT+GGG | 0.517389 | 7_4:-34498828 | None:intergenic |
| TCTGGATGAGCATCAAATCC+TGG | 0.518424 | 7_4:-34499079 | None:intergenic |
| ATGCCAGCTCATCAACTAAG+AGG | 0.520849 | 7_4:+34495300 | Msa1150700:CDS |
| ATATATATTATATTAATCAT+CGG | 0.521706 | 7_4:+34499265 | Msa1150700:three_prime_UTR |
| GGAAATGGAAAGTGAGAGAG+AGG | 0.522331 | 7_4:-34499163 | None:intergenic |
| CAGTACCACCACCAAACCAA+CGG | 0.525433 | 7_4:-34498325 | None:intergenic |
| GGTGCTCGATTTGATCCCAT+TGG | 0.526145 | 7_4:+34498813 | Msa1150700:CDS |
| TTGAGCCCAACCGATTTGCT+AGG | 0.534749 | 7_4:+34498856 | Msa1150700:CDS |
| AACGAATATAAACTAAATTG+AGG | 0.535995 | 7_4:-34499310 | None:intergenic |
| GACGGATACATACCGGCACC+TGG | 0.537560 | 7_4:-34498147 | None:intergenic |
| TTTCTATGTGTGCAGTGTTG+GGG | 0.537837 | 7_4:+34495166 | Msa1150700:intron |
| AGGGGTGATCATGACTTTGG+AGG | 0.539975 | 7_4:+34498275 | Msa1150700:intron |
| GTCCTCATGATTATCACCCT+GGG | 0.542217 | 7_4:+34497125 | Msa1150700:CDS |
| ACCATACCTAGCAAATCGGT+TGG | 0.543886 | 7_4:-34498862 | None:intergenic |
| TGATAATCATGAGGACCAGC+AGG | 0.544625 | 7_4:-34497118 | None:intergenic |
| AGTGGCGGTGAGGATGTAAC+CGG | 0.546122 | 7_4:-34493270 | None:intergenic |
| TTGGAGGCAGCATGCTCGTA+GGG | 0.547144 | 7_4:+34498291 | Msa1150700:CDS |
| GGAGGACCTGGTGTTATTGG+AGG | 0.548151 | 7_4:+34498362 | Msa1150700:CDS |
| TGGTTTGGTGGTGGTACTGG+TGG | 0.549196 | 7_4:+34498329 | Msa1150700:CDS |
| TTTGGAGGCAGCATGCTCGT+AGG | 0.555059 | 7_4:+34498290 | Msa1150700:CDS |
| ATTGTCCCTCCAGTTCCCGC+TGG | 0.556262 | 7_4:+34498099 | Msa1150700:CDS |
| TGGAAAGAGCGGTATCGGAG+AGG | 0.556919 | 7_4:-34493304 | None:intergenic |
| CTAAATAGGGGTGTTCCACC+GGG | 0.557474 | 7_4:+34498792 | Msa1150700:intron |
| CCATACCTAGCAAATCGGTT+GGG | 0.563249 | 7_4:-34498861 | None:intergenic |
| GTTGCGGAAGGTTGGTCGCG+CGG | 0.563767 | 7_4:-34493201 | None:intergenic |
| TACTTGATTTCAAGATGCAG+AGG | 0.566134 | 7_4:-34493588 | None:intergenic |
| ACTGGTGGAGGTATTGGTGG+AGG | 0.566270 | 7_4:+34498344 | Msa1150700:CDS |
| GATGCTTCGCGGTGTAAGTG+TGG | 0.569096 | 7_4:-34493067 | None:intergenic |
| GGAAAGAGCGGTATCGGAGA+GGG | 0.573421 | 7_4:-34493303 | None:intergenic |
| CCAGAACCAGCGGGAACTGG+AGG | 0.573485 | 7_4:-34498105 | None:intergenic |
| AGGGACACCAGGAGGTCCAA+TGG | 0.574867 | 7_4:-34498829 | None:intergenic |
| CCAGCAGGTTCACCAAATCC+AGG | 0.575713 | 7_4:-34497103 | None:intergenic |
| AGAAAGTTGAAGATGCTTCG+CGG | 0.583278 | 7_4:-34493078 | None:intergenic |
| GGGGTGGGGTTATACCTTGA+CGG | 0.583502 | 7_4:-34498165 | None:intergenic |
| ATACCTTGACGGATACATAC+CGG | 0.597491 | 7_4:-34498154 | None:intergenic |
| TACGCGAATTCGGAGAAGGA+GGG | 0.602784 | 7_4:+34493486 | Msa1150700:CDS |
| TTACGCGAATTCGGAGAAGG+AGG | 0.617959 | 7_4:+34493485 | Msa1150700:CDS |
| CTTGAGGACCAGTGGCGGTG+AGG | 0.618192 | 7_4:-34493280 | None:intergenic |
| ATGGGATCAAATCGAGCACC+CGG | 0.619736 | 7_4:-34498810 | None:intergenic |
| TGCGAGGACTGATTTGTCGG+TGG | 0.622691 | 7_4:-34493168 | None:intergenic |
| CAGAACCAGCGGGAACTGGA+GGG | 0.627447 | 7_4:-34498104 | None:intergenic |
| GGAGAGGGCTTGAGGACCAG+TGG | 0.628685 | 7_4:-34493288 | None:intergenic |
| AGATCACTACCAGAACCAGC+GGG | 0.635170 | 7_4:-34498114 | None:intergenic |
| ATTAGAGGGGTTGGAAAGAG+CGG | 0.637322 | 7_4:-34493315 | None:intergenic |
| GCGGTATCGGAGAGGGCTTG+AGG | 0.638279 | 7_4:-34493296 | None:intergenic |
| GAGGGCTTGAGGACCAGTGG+CGG | 0.638463 | 7_4:-34493285 | None:intergenic |
| TGAGGATGTAACCGGAAGCG+AGG | 0.639486 | 7_4:-34493262 | None:intergenic |
| ATCGGTTGGGCTCAAAACCA+GGG | 0.644206 | 7_4:-34498848 | None:intergenic |
| AATCCTCCTCCAATAACACC+AGG | 0.647098 | 7_4:-34498368 | None:intergenic |
| ACGTCGTCGATCACCAACAA+TGG | 0.650003 | 7_4:+34493145 | Msa1150700:exon |
| ATGCTTCGCGGTGTAAGTGT+GGG | 0.665105 | 7_4:-34493066 | None:intergenic |
| GTGCCGGTATGTATCCGTCA+AGG | 0.666927 | 7_4:+34498151 | Msa1150700:CDS |
| AAGATCACTACCAGAACCAG+CGG | 0.674259 | 7_4:-34498115 | None:intergenic |
| GACTATGCTGGAGAAGATGG+AGG | 0.675512 | 7_4:+34495188 | Msa1150700:CDS |
| TACCCAGGGTGATAATCATG+AGG | 0.675751 | 7_4:-34497127 | None:intergenic |
| GCGCGGCTCTGATTACTGCG+AGG | 0.693510 | 7_4:-34493184 | None:intergenic |
| GGATCAAATCGAGCACCCGG+TGG | 0.696291 | 7_4:-34498807 | None:intergenic |
| TCAAAACCAGGGACACCAGG+AGG | 0.703414 | 7_4:-34498837 | None:intergenic |
| TACCACCACCAAACCAACGG+GGG | 0.719675 | 7_4:-34498322 | None:intergenic |
| GTACCACCACCAAACCAACG+GGG | 0.747025 | 7_4:-34498323 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAATTTTTATTTA+TGG | + | chr7_4:34493621-34493640 | Msa1150700:intron | 0.0% |
| !!! | AAAAAAAGAAGATTTTTTTA+GGG | - | chr7_4:34493346-34493365 | None:intergenic | 10.0% |
| !!! | TTTTAATTTTTATTTATGGT+TGG | + | chr7_4:34493625-34493644 | Msa1150700:intron | 10.0% |
| !!! | AAAAAAATTACCTTTTTAAA+TGG | + | chr7_4:34496814-34496833 | Msa1150700:intron | 10.0% |
| !! | AACTATAAATTTATCTAAAT+AGG | + | chr7_4:34498778-34498797 | Msa1150700:intron | 10.0% |
| !! | ACTATAAATTTATCTAAATA+GGG | + | chr7_4:34498779-34498798 | Msa1150700:intron | 10.0% |
| !!! | GAAAAAAAGAAGATTTTTTT+AGG | - | chr7_4:34493347-34493366 | None:intergenic | 15.0% |
| !!! | TATTTTTGTGTTGAAATTTT+TGG | + | chr7_4:34493943-34493962 | Msa1150700:intron | 15.0% |
| !! | ATTATGATAATATGGAAAAT+GGG | + | chr7_4:34493999-34494018 | Msa1150700:intron | 15.0% |
| !! | TGATATATAATAGAACATTA+TGG | + | chr7_4:34494362-34494381 | Msa1150700:intron | 15.0% |
| !! | TATTACATTGAAAATTGAAA+AGG | - | chr7_4:34495349-34495368 | None:intergenic | 15.0% |
| !!! | ATACTTGAAAATTTTGAATT+GGG | + | chr7_4:34495405-34495424 | Msa1150700:intron | 15.0% |
| !!! | TCAAATATGTGATTAATTTT+GGG | + | chr7_4:34497222-34497241 | Msa1150700:intron | 15.0% |
| !! | GATATTATATTTATCTTTCT+TGG | + | chr7_4:34497711-34497730 | Msa1150700:intron | 15.0% |
| !! | CTATAAATTTATCTAAATAG+GGG | + | chr7_4:34498780-34498799 | Msa1150700:intron | 15.0% |
| !!! | CTTTCTTTCTTTCAATTTTT+TGG | + | chr7_4:34493366-34493385 | Msa1150700:intron | 20.0% |
| !!! | TTTTGTGTTGTTGATAAATT+TGG | + | chr7_4:34493660-34493679 | Msa1150700:intron | 20.0% |
| !!! | ATGTTGAATTATGCTAATTT+TGG | + | chr7_4:34493705-34493724 | Msa1150700:intron | 20.0% |
| !!! | ATTATGCTAATTTTGGAAAT+TGG | + | chr7_4:34493712-34493731 | Msa1150700:intron | 20.0% |
| !!! | TTATGCTAATTTTGGAAATT+GGG | + | chr7_4:34493713-34493732 | Msa1150700:intron | 20.0% |
| !!! | TATTACTCTTTTTCTTTTGT+GGG | + | chr7_4:34493737-34493756 | Msa1150700:intron | 20.0% |
| !! | GATTATGATAATATGGAAAA+TGG | + | chr7_4:34493998-34494017 | Msa1150700:intron | 20.0% |
| !! | TTATGATAATATGGAAAATG+GGG | + | chr7_4:34494000-34494019 | Msa1150700:intron | 20.0% |
| !!! | TCTTTCTTAATAGTTTTTCT+AGG | - | chr7_4:34494334-34494353 | None:intergenic | 20.0% |
| !!! | AACGTTTTCAGATTTATATT+GGG | - | chr7_4:34494596-34494615 | None:intergenic | 20.0% |
| !! | AATAAGCTGAAAATAGTTTA+TGG | + | chr7_4:34494910-34494929 | Msa1150700:intron | 20.0% |
| !! | AAACATTTATCAAACTGTTT+GGG | - | chr7_4:34494970-34494989 | None:intergenic | 20.0% |
| !! | TAAACATTTATCAAACTGTT+TGG | - | chr7_4:34494971-34494990 | None:intergenic | 20.0% |
| !!! | GATATTTTGTCAAAATTAGA+TGG | + | chr7_4:34495269-34495288 | Msa1150700:CDS | 20.0% |
| !!! | CATACTTGAAAATTTTGAAT+TGG | + | chr7_4:34495404-34495423 | Msa1150700:intron | 20.0% |
| !!! | TAAACTTTACATCGTTTTTT+CGG | + | chr7_4:34495586-34495605 | Msa1150700:intron | 20.0% |
| !!! | CATATACAAAAACATTTTGT+TGG | - | chr7_4:34495751-34495770 | None:intergenic | 20.0% |
| !!! | TTTGTATATGCTTTTTTACT+TGG | + | chr7_4:34495761-34495780 | Msa1150700:intron | 20.0% |
| !! | AGAAAAGAAAAAGGTTATAT+TGG | - | chr7_4:34496065-34496084 | None:intergenic | 20.0% |
| !! | TATTGAAACAGAAAAGAAAA+AGG | - | chr7_4:34496074-34496093 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAAAAAAACGAG+AGG | - | chr7_4:34496418-34496437 | None:intergenic | 20.0% |
| !!! | TAACTTTTGGATATTTTGAT+CGG | + | chr7_4:34496556-34496575 | Msa1150700:intron | 20.0% |
| !! | AACCAATGTAAGATAATAAA+AGG | + | chr7_4:34496611-34496630 | Msa1150700:intron | 20.0% |
| !!! | AACCTTTTATTATCTTACAT+TGG | - | chr7_4:34496616-34496635 | None:intergenic | 20.0% |
| !!! | GTCAAATATGTGATTAATTT+TGG | + | chr7_4:34497221-34497240 | Msa1150700:intron | 20.0% |
| !! | GATAAAATATATACCAAACA+GGG | - | chr7_4:34497289-34497308 | None:intergenic | 20.0% |
| !! | ATAATAATGTGACATTTGAT+GGG | - | chr7_4:34497475-34497494 | None:intergenic | 20.0% |
| !! | TATAATAATGTGACATTTGA+TGG | - | chr7_4:34497476-34497495 | None:intergenic | 20.0% |
| !! | TATTTATATTCCCAAAACTT+TGG | + | chr7_4:34497494-34497513 | Msa1150700:intron | 20.0% |
| !! | GAAAAACATATATACATGAA+GGG | - | chr7_4:34497547-34497566 | None:intergenic | 20.0% |
| !! | AGAAAAACATATATACATGA+AGG | - | chr7_4:34497548-34497567 | None:intergenic | 20.0% |
| !!! | TTCATGTATATATGTTTTTC+TGG | + | chr7_4:34497547-34497566 | Msa1150700:intron | 20.0% |
| !!! | TCATGTATATATGTTTTTCT+GGG | + | chr7_4:34497548-34497567 | Msa1150700:intron | 20.0% |
| !!! | CAAAAAACAGTTTTGAATTT+TGG | - | chr7_4:34497883-34497902 | None:intergenic | 20.0% |
| !! | AACTAATTATTCCATTAAAG+TGG | - | chr7_4:34497963-34497982 | None:intergenic | 20.0% |
| !! | TATAGAGTTTAAATGACTTA+CGG | - | chr7_4:34498395-34498414 | None:intergenic | 20.0% |
| !! | AACGAATATAAACTAAATTG+AGG | - | chr7_4:34499313-34499332 | None:intergenic | 20.0% |
| ! | TTAAATGTCTTGTCATGAAT+GGG | + | chr7_4:34493526-34493545 | Msa1150700:CDS | 25.0% |
| ! | TTGATAAATTTGGAAGAAGA+TGG | + | chr7_4:34493670-34493689 | Msa1150700:intron | 25.0% |
| ! | TGATAAATTTGGAAGAAGAT+GGG | + | chr7_4:34493671-34493690 | Msa1150700:intron | 25.0% |
| !!! | TATGCTAATTTTGGAAATTG+GGG | + | chr7_4:34493714-34493733 | Msa1150700:intron | 25.0% |
| !! | GTATTACTCTTTTTCTTTTG+TGG | + | chr7_4:34493736-34493755 | Msa1150700:intron | 25.0% |
| !!! | AATTTTTGGATTTTTGCAAC+TGG | + | chr7_4:34493957-34493976 | Msa1150700:intron | 25.0% |
| !!! | ATTTTTGGATTTTTGCAACT+GGG | + | chr7_4:34493958-34493977 | Msa1150700:intron | 25.0% |
| !! | TGGATTGGATTATGATAATA+TGG | + | chr7_4:34493991-34494010 | Msa1150700:intron | 25.0% |
| ! | TGCTTAATTTATTCTCGAAT+TGG | - | chr7_4:34494087-34494106 | None:intergenic | 25.0% |
| ! | TAGACATGATTGGATTATAA+AGG | + | chr7_4:34494147-34494166 | Msa1150700:intron | 25.0% |
| ! | GATTATAAAGGACAACATAA+GGG | + | chr7_4:34494159-34494178 | Msa1150700:intron | 25.0% |
| ! | ATGCTTTATAAACACTACAT+AGG | - | chr7_4:34494533-34494552 | None:intergenic | 25.0% |
| !! | CAACGTTTTCAGATTTATAT+TGG | - | chr7_4:34494597-34494616 | None:intergenic | 25.0% |
| !!! | AATGATCTGATTTTTTGTGT+AGG | + | chr7_4:34494671-34494690 | Msa1150700:intron | 25.0% |
| ! | ACAGTTACGAAAATCATAAA+TGG | - | chr7_4:34494697-34494716 | None:intergenic | 25.0% |
| ! | AGATAATAAGCACATTTGTT+TGG | - | chr7_4:34495023-34495042 | None:intergenic | 25.0% |
| !!! | TAAAACCTTGATTTTAGTCT+AGG | + | chr7_4:34495062-34495081 | Msa1150700:intron | 25.0% |
| ! | AAAATCCTAGACTAAAATCA+AGG | - | chr7_4:34495070-34495089 | None:intergenic | 25.0% |
| ! | GTGTAAAAAAGCTTCTATAT+TGG | + | chr7_4:34495549-34495568 | Msa1150700:intron | 25.0% |
| !!! | ATAATGTTTGTTATTAGCCA+TGG | + | chr7_4:34495609-34495628 | Msa1150700:intron | 25.0% |
| !! | TCAAAACAATGTTTTGTACA+AGG | + | chr7_4:34496036-34496055 | Msa1150700:intron | 25.0% |
| ! | AATATGAAACTGAATTAAGC+TGG | - | chr7_4:34496281-34496300 | None:intergenic | 25.0% |
| !!! | GTACCGAAGAAATTTTTTTA+GGG | - | chr7_4:34496503-34496522 | None:intergenic | 25.0% |
| !!! | AGTACCGAAGAAATTTTTTT+AGG | - | chr7_4:34496504-34496523 | None:intergenic | 25.0% |
| ! | ATATCCAAAAGTTAATGAAG+AGG | - | chr7_4:34496550-34496569 | None:intergenic | 25.0% |
| ! | CAAATAAAAAACACAGCAAT+AGG | + | chr7_4:34496685-34496704 | Msa1150700:intron | 25.0% |
| ! | CCATTGTATTTGTTTCATTT+GGG | + | chr7_4:34496942-34496961 | Msa1150700:intron | 25.0% |
| ! | AATTAGAAATTTCTTACCCA+GGG | - | chr7_4:34497144-34497163 | None:intergenic | 25.0% |
| ! | GGATAAAATATATACCAAAC+AGG | - | chr7_4:34497290-34497309 | None:intergenic | 25.0% |
| ! | TAAATATTGCATCAGAATGT+GGG | - | chr7_4:34497331-34497350 | None:intergenic | 25.0% |
| ! | TTAAATATTGCATCAGAATG+TGG | - | chr7_4:34497332-34497351 | None:intergenic | 25.0% |
| ! | GGATAAGTATGTAACTTAAA+AGG | - | chr7_4:34497942-34497961 | None:intergenic | 25.0% |
| ! | TACATACTTATCCACTTTAA+TGG | + | chr7_4:34497949-34497968 | Msa1150700:intron | 25.0% |
| ! | AATAATTAGTTACCTTATGC+CGG | + | chr7_4:34497972-34497991 | Msa1150700:intron | 25.0% |
| ! | ACAAGTTCAAAATTAGAGAA+GGG | - | chr7_4:34498013-34498032 | None:intergenic | 25.0% |
| ! | TACAAGTTCAAAATTAGAGA+AGG | - | chr7_4:34498014-34498033 | None:intergenic | 25.0% |
| !! | TGAACTTGTACAAATACTTT+TGG | + | chr7_4:34498024-34498043 | Msa1150700:intron | 25.0% |
| ! | TCAGTGTAGTTAAATGTTAA+AGG | + | chr7_4:34498433-34498452 | Msa1150700:intron | 25.0% |
| ! | TAAGTAAGCTGTTAAATGTT+AGG | - | chr7_4:34498534-34498553 | None:intergenic | 25.0% |
| ! | AGATTGACTAAAACAAATTG+TGG | - | chr7_4:34498973-34498992 | None:intergenic | 25.0% |
| !!! | CTACATTTTTTCACATGTTA+AGG | + | chr7_4:34498997-34499016 | Msa1150700:intron | 25.0% |
| ! | TTGTCATATTCATATGGAAA+TGG | - | chr7_4:34499181-34499200 | None:intergenic | 25.0% |
| ! | TTCCATATGAATATGACAAT+AGG | + | chr7_4:34499182-34499201 | Msa1150700:three_prime_UTR | 25.0% |
| ! | ATCCTATTGTCATATTCATA+TGG | - | chr7_4:34499187-34499206 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTGGTTTGTGAAA+GGG | - | chr7_4:34493110-34493129 | None:intergenic | 30.0% |
| !!! | TTTTTAGGGTTACCATTAGA+GGG | - | chr7_4:34493332-34493351 | None:intergenic | 30.0% |
| !!! | TTTTTTAGGGTTACCATTAG+AGG | - | chr7_4:34493333-34493352 | None:intergenic | 30.0% |
| GTTAAATGTCTTGTCATGAA+TGG | + | chr7_4:34493525-34493544 | Msa1150700:CDS | 30.0% | |
| TTGTTATGCTGTAAATGATC+TGG | + | chr7_4:34494039-34494058 | Msa1150700:intron | 30.0% | |
| GGATTATAAAGGACAACATA+AGG | + | chr7_4:34494158-34494177 | Msa1150700:intron | 30.0% | |
| TTCCACATTGTTAAGAGATA+TGG | + | chr7_4:34494507-34494526 | Msa1150700:intron | 30.0% | |
| TTAAGATGTTTATCCAACCA+GGG | - | chr7_4:34494744-34494763 | None:intergenic | 30.0% | |
| ATTAAGATGTTTATCCAACC+AGG | - | chr7_4:34494745-34494764 | None:intergenic | 30.0% | |
| GCTGAAAATAGTTTATGGAT+TGG | + | chr7_4:34494915-34494934 | Msa1150700:intron | 30.0% | |
| ACTTATTTGAGCTTATCAAC+TGG | - | chr7_4:34494996-34495015 | None:intergenic | 30.0% | |
| ! | CTTATTATCTGAAGTGTCTA+AGG | + | chr7_4:34495033-34495052 | Msa1150700:intron | 30.0% |
| !!! | ATTTTTTATCCGTTTGTGCA+AGG | + | chr7_4:34495085-34495104 | Msa1150700:intron | 30.0% |
| CATCAACTAAGAGGTAAATA+TGG | + | chr7_4:34495309-34495328 | Msa1150700:intron | 30.0% | |
| ! | ATCTTTATGCTGATAGTGAA+TGG | + | chr7_4:34495460-34495479 | Msa1150700:intron | 30.0% |
| TGAAATTTAGAGACTGTGTT+CGG | - | chr7_4:34495657-34495676 | None:intergenic | 30.0% | |
| GATAAGAATGTTGACATGTA+AGG | - | chr7_4:34495976-34495995 | None:intergenic | 30.0% | |
| GAGAAGAATTTGAGAAATCA+AGG | - | chr7_4:34496006-34496025 | None:intergenic | 30.0% | |
| ! | TTGTATTTTGCTACATTGTC+TGG | + | chr7_4:34496108-34496127 | Msa1150700:intron | 30.0% |
| ! | TGTATTTTGCTACATTGTCT+GGG | + | chr7_4:34496109-34496128 | Msa1150700:intron | 30.0% |
| AAAACAATTAAGACGATGGA+TGG | - | chr7_4:34496181-34496200 | None:intergenic | 30.0% | |
| ACTGAAAACAATTAAGACGA+TGG | - | chr7_4:34496185-34496204 | None:intergenic | 30.0% | |
| GAGTGAAGTGAATTATCTAA+AGG | - | chr7_4:34496334-34496353 | None:intergenic | 30.0% | |
| CTAAGTTCATTATAAGATGC+TGG | + | chr7_4:34496353-34496372 | Msa1150700:intron | 30.0% | |
| GAGCCCTAAAAAAATTTCTT+CGG | + | chr7_4:34496497-34496516 | Msa1150700:intron | 30.0% | |
| GTAGTAAACCTACACAAAAT+AGG | + | chr7_4:34496750-34496769 | Msa1150700:intron | 30.0% | |
| !!! | GTAATTTTTTTACTCCGACA+TGG | - | chr7_4:34496805-34496824 | None:intergenic | 30.0% |
| GCCATTGTATTTGTTTCATT+TGG | + | chr7_4:34496941-34496960 | Msa1150700:intron | 30.0% | |
| CCCAAATGAAACAAATACAA+TGG | - | chr7_4:34496945-34496964 | None:intergenic | 30.0% | |
| CACGAAGAATGTAATACATA+GGG | - | chr7_4:34496994-34497013 | None:intergenic | 30.0% | |
| TCACGAAGAATGTAATACAT+AGG | - | chr7_4:34496995-34497014 | None:intergenic | 30.0% | |
| ! | GAAGGAAACAAAAACGATTT+TGG | - | chr7_4:34497033-34497052 | None:intergenic | 30.0% |
| GAATTAGAAATTTCTTACCC+AGG | - | chr7_4:34497145-34497164 | None:intergenic | 30.0% | |
| AGTGAAACTTAAATAGCATC+AGG | - | chr7_4:34497167-34497186 | None:intergenic | 30.0% | |
| !! | GTTGACTATTTTGAGCTTAT+TGG | + | chr7_4:34497255-34497274 | Msa1150700:intron | 30.0% |
| AAAATATATACCAAACAGGG+TGG | - | chr7_4:34497286-34497305 | None:intergenic | 30.0% | |
| !!! | GGGAAATACTATTTTTGTGT+TGG | - | chr7_4:34497311-34497330 | None:intergenic | 30.0% |
| ! | TTCCAAAATCTAGAACAAAG+CGG | + | chr7_4:34497398-34497417 | Msa1150700:intron | 30.0% |
| TATTCCCAAAACTTTGGTAA+TGG | + | chr7_4:34497500-34497519 | Msa1150700:intron | 30.0% | |
| ! | TTCTCCATTACCAAAGTTTT+GGG | - | chr7_4:34497507-34497526 | None:intergenic | 30.0% |
| ! | TTTCTCCATTACCAAAGTTT+TGG | - | chr7_4:34497508-34497527 | None:intergenic | 30.0% |
| !! | AACTTTGGTAATGGAGAAAA+CGG | + | chr7_4:34497509-34497528 | Msa1150700:intron | 30.0% |
| ! | TTATATAGCAGGGTTTCTTT+TGG | - | chr7_4:34497626-34497645 | None:intergenic | 30.0% |
| CTAATGTAACCACTAATCTT+TGG | + | chr7_4:34497772-34497791 | Msa1150700:intron | 30.0% | |
| ! | AACCACTAATCTTTGGAAAT+TGG | + | chr7_4:34497779-34497798 | Msa1150700:intron | 30.0% |
| AACATCATGATATGGAATAG+TGG | - | chr7_4:34497811-34497830 | None:intergenic | 30.0% | |
| GTTGAAGTAACATCATGATA+TGG | - | chr7_4:34497819-34497838 | None:intergenic | 30.0% | |
| ATAATTAGTTACCTTATGCC+GGG | + | chr7_4:34497973-34497992 | Msa1150700:intron | 30.0% | |
| CAAGTTCAAAATTAGAGAAG+GGG | - | chr7_4:34498012-34498031 | None:intergenic | 30.0% | |
| TCAACACTGTAATTAGCAAA+AGG | - | chr7_4:34499341-34499360 | None:intergenic | 30.0% | |
| ! | TGTTGATCTGTTTTCAGAAT+TGG | + | chr7_4:34499355-34499374 | Msa1150700:three_prime_UTR | 30.0% |
| !!! | GAGTGTTTTTGGTTTGTGAA+AGG | - | chr7_4:34493111-34493130 | None:intergenic | 35.0% |
| !!! | TTTTAGGGTTACCATTAGAG+GGG | - | chr7_4:34493331-34493350 | None:intergenic | 35.0% |
| !! | TGTGTTTTTGTGTGTAGATG+AGG | + | chr7_4:34493416-34493435 | Msa1150700:intron | 35.0% |
| ATGAGGTTTCTGTTGATCAT+TGG | + | chr7_4:34493433-34493452 | Msa1150700:CDS | 35.0% | |
| TTGTTCATGCTTTGTCTCAA+GGG | + | chr7_4:34493556-34493575 | Msa1150700:CDS | 35.0% | |
| TACTTGATTTCAAGATGCAG+AGG | - | chr7_4:34493591-34493610 | None:intergenic | 35.0% | |
| AATTAAGCATAGCAGAGATG+AGG | + | chr7_4:34494098-34494117 | Msa1150700:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGA+TGG | + | chr7_4:34494198-34494217 | Msa1150700:intron | 35.0% | |
| ACCTATAGTAGAAAAGATGG+TGG | + | chr7_4:34494201-34494220 | Msa1150700:intron | 35.0% | |
| ! | TCCACCATCTTTTCTACTAT+AGG | - | chr7_4:34494205-34494224 | None:intergenic | 35.0% |
| ! | AAGGAGCGTATATCATAGAT+AGG | + | chr7_4:34494279-34494298 | Msa1150700:intron | 35.0% |
| ! | AGGAGCGTATATCATAGATA+GGG | + | chr7_4:34494280-34494299 | Msa1150700:intron | 35.0% |
| ! | TTCATTATACTGGCTGTGAA+GGG | + | chr7_4:34494474-34494493 | Msa1150700:intron | 35.0% |
| TCGTAACTGTGTTTCTTTGT+TGG | + | chr7_4:34494707-34494726 | Msa1150700:intron | 35.0% | |
| AATTCTAAGCCTTGCACAAA+CGG | - | chr7_4:34495097-34495116 | None:intergenic | 35.0% | |
| AACACAGAACACATCTCAAA+GGG | - | chr7_4:34495146-34495165 | None:intergenic | 35.0% | |
| AAACACAGAACACATCTCAA+AGG | - | chr7_4:34495147-34495166 | None:intergenic | 35.0% | |
| ! | TTTTTCTATGTGTGCAGTGT+TGG | + | chr7_4:34495164-34495183 | Msa1150700:intron | 35.0% |
| ! | TTTTCTATGTGTGCAGTGTT+GGG | + | chr7_4:34495165-34495184 | Msa1150700:intron | 35.0% |
| TTCTCAGCAGTTCAAGAATT+TGG | + | chr7_4:34495220-34495239 | Msa1150700:CDS | 35.0% | |
| GCATGCCTTACATAATTCTT+CGG | + | chr7_4:34495376-34495395 | Msa1150700:intron | 35.0% | |
| CATGCCTTACATAATTCTTC+GGG | + | chr7_4:34495377-34495396 | Msa1150700:intron | 35.0% | |
| TACTCCCGAAGAATTATGTA+AGG | - | chr7_4:34495384-34495403 | None:intergenic | 35.0% | |
| GTACTCTTATAAGTCATGAC+TGG | - | chr7_4:34495438-34495457 | None:intergenic | 35.0% | |
| AAAAGCTTCTATATTGGCAG+TGG | + | chr7_4:34495555-34495574 | Msa1150700:intron | 35.0% | |
| AAATTTAGAGACTGTGTTCG+GGG | - | chr7_4:34495655-34495674 | None:intergenic | 35.0% | |
| GAAATTTAGAGACTGTGTTC+GGG | - | chr7_4:34495656-34495675 | None:intergenic | 35.0% | |
| !! | TTGCTGTCTTCGTTTTAACA+TGG | - | chr7_4:34495694-34495713 | None:intergenic | 35.0% |
| !! | CGCACTATGATTTGTTTGAA+GGG | - | chr7_4:34495871-34495890 | None:intergenic | 35.0% |
| GTAGCAAAATACAAAGCTGT+TGG | - | chr7_4:34496102-34496121 | None:intergenic | 35.0% | |
| ! | GTATTTTGCTACATTGTCTG+GGG | + | chr7_4:34496110-34496129 | Msa1150700:intron | 35.0% |
| CTTCAAAATGACTGTCAGTA+TGG | + | chr7_4:34496235-34496254 | Msa1150700:intron | 35.0% | |
| TGAAACTGAATTAAGCTGGA+TGG | - | chr7_4:34496277-34496296 | None:intergenic | 35.0% | |
| !!! | GCTCTAGTAATTTTTTCGAG+GGG | - | chr7_4:34496481-34496500 | None:intergenic | 35.0% |
| !!! | GGCTCTAGTAATTTTTTCGA+GGG | - | chr7_4:34496482-34496501 | None:intergenic | 35.0% |
| AAAAGTTAATGAAGAGGTGG+AGG | - | chr7_4:34496544-34496563 | None:intergenic | 35.0% | |
| ! | TCCACCTCTTCATTAACTTT+TGG | + | chr7_4:34496543-34496562 | Msa1150700:intron | 35.0% |
| TCCAAAAGTTAATGAAGAGG+TGG | - | chr7_4:34496547-34496566 | None:intergenic | 35.0% | |
| !! | CATTAGTCTGTAACTTGTTC+TGG | - | chr7_4:34496731-34496750 | None:intergenic | 35.0% |
| ! | GTATTGTGCCTATTTTGTGT+AGG | - | chr7_4:34496761-34496780 | None:intergenic | 35.0% |
| AGGCACAATACATCATAAGA+AGG | + | chr7_4:34496770-34496789 | Msa1150700:intron | 35.0% | |
| GGCACAATACATCATAAGAA+GGG | + | chr7_4:34496771-34496790 | Msa1150700:intron | 35.0% | |
| ATTCGGGTGTCCATTTAAAA+AGG | - | chr7_4:34496827-34496846 | None:intergenic | 35.0% | |
| GAATGATGCATTAGTAAACC+TGG | + | chr7_4:34496919-34496938 | Msa1150700:intron | 35.0% | |
| ATGAAACAAATACAATGGCC+AGG | - | chr7_4:34496940-34496959 | None:intergenic | 35.0% | |
| AATACATAGGGATTGCATCA+TGG | - | chr7_4:34496982-34497001 | None:intergenic | 35.0% | |
| !! | TACATTTTAATGCTGCTCAG+TGG | + | chr7_4:34497191-34497210 | Msa1150700:intron | 35.0% |
| !! | TTCCGCTTTGTTCTAGATTT+TGG | - | chr7_4:34497403-34497422 | None:intergenic | 35.0% |
| TAGAACAAAGCGGAAAAAAG+AGG | + | chr7_4:34497408-34497427 | Msa1150700:intron | 35.0% | |
| AGAACAAAGCGGAAAAAAGA+GGG | + | chr7_4:34497409-34497428 | Msa1150700:intron | 35.0% | |
| !! | AAAAAGAGGGTGTTACTGTT+AGG | + | chr7_4:34497422-34497441 | Msa1150700:intron | 35.0% |
| !! | CAATTAGTCTTGATTTGGAG+AGG | - | chr7_4:34497450-34497469 | None:intergenic | 35.0% |
| CTCTCCAAATCAAGACTAAT+TGG | + | chr7_4:34497448-34497467 | Msa1150700:intron | 35.0% | |
| CAGTTATGATGTTCAGCATA+TGG | + | chr7_4:34497582-34497601 | Msa1150700:intron | 35.0% | |
| !! | TATGGTTGCTGTTTGCTATT+AGG | + | chr7_4:34497600-34497619 | Msa1150700:intron | 35.0% |
| CTAGGCACATTTATATAGCA+GGG | - | chr7_4:34497636-34497655 | None:intergenic | 35.0% | |
| ACTAGGCACATTTATATAGC+AGG | - | chr7_4:34497637-34497656 | None:intergenic | 35.0% | |
| AAATGTGCCTAGTTTCCTAT+TGG | + | chr7_4:34497644-34497663 | Msa1150700:intron | 35.0% | |
| AAGATAGCCAATAGGAAACT+AGG | - | chr7_4:34497654-34497673 | None:intergenic | 35.0% | |
| TCTTTGACAAGATAGCCAAT+AGG | - | chr7_4:34497662-34497681 | None:intergenic | 35.0% | |
| CACCAATTTCCAAAGATTAG+TGG | - | chr7_4:34497784-34497803 | None:intergenic | 35.0% | |
| AGAGACAAGAAATGTAACGT+GGG | - | chr7_4:34498188-34498207 | None:intergenic | 35.0% | |
| AAGAGACAAGAAATGTAACG+TGG | - | chr7_4:34498189-34498208 | None:intergenic | 35.0% | |
| ACGTTACATTTCTTGTCTCT+TGG | + | chr7_4:34498188-34498207 | Msa1150700:intron | 35.0% | |
| CGTTACATTTCTTGTCTCTT+GGG | + | chr7_4:34498189-34498208 | Msa1150700:intron | 35.0% | |
| TTGAGTGGTGCATATTTAGA+AGG | - | chr7_4:34498251-34498270 | None:intergenic | 35.0% | |
| AATATGCACCACTCAATTTC+AGG | + | chr7_4:34498255-34498274 | Msa1150700:intron | 35.0% | |
| ATATGCACCACTCAATTTCA+GGG | + | chr7_4:34498256-34498275 | Msa1150700:intron | 35.0% | |
| TAGGTTCCCTCTACAAAATA+CGG | - | chr7_4:34498515-34498534 | None:intergenic | 35.0% | |
| ACAGGGTAGTCAAATACAAA+AGG | - | chr7_4:34498722-34498741 | None:intergenic | 35.0% | |
| AACCACATGTATCAATCACA+GGG | - | chr7_4:34498739-34498758 | None:intergenic | 35.0% | |
| TAACCACATGTATCAATCAC+AGG | - | chr7_4:34498740-34498759 | None:intergenic | 35.0% | |
| ! | ACTTTTCTTTCCTATCTTGC+AGG | + | chr7_4:34499044-34499063 | Msa1150700:intron | 35.0% |
| AATCTGAATCAGTGTCTCTT+CGG | - | chr7_4:34499117-34499136 | None:intergenic | 35.0% | |
| AGAAAGTTGAAGATGCTTCG+CGG | - | chr7_4:34493081-34493100 | None:intergenic | 40.0% | |
| !!! | GTTCACGATGAGAGTGTTTT+TGG | - | chr7_4:34493122-34493141 | None:intergenic | 40.0% |
| !!! | CGATTTTGTCGTTTTGGTTG+CGG | - | chr7_4:34493220-34493239 | None:intergenic | 40.0% |
| !! | CGAAAGCGATTTTGTCGTTT+TGG | - | chr7_4:34493226-34493245 | None:intergenic | 40.0% |
| TGCGTTTGTTTACGCGAATT+CGG | + | chr7_4:34493476-34493495 | Msa1150700:CDS | 40.0% | |
| CTTGTTCATGCTTTGTCTCA+AGG | + | chr7_4:34493555-34493574 | Msa1150700:CDS | 40.0% | |
| CGGACACATGTGATTACATT+CGG | - | chr7_4:34493849-34493868 | None:intergenic | 40.0% | |
| ! | TAAATGATCTGGAACAGTGC+TGG | + | chr7_4:34494050-34494069 | Msa1150700:intron | 40.0% |
| ! | AAATGATCTGGAACAGTGCT+GGG | + | chr7_4:34494051-34494070 | Msa1150700:intron | 40.0% |
| GTGGTAAGACTAGACATGAT+TGG | + | chr7_4:34494137-34494156 | Msa1150700:intron | 40.0% | |
| GACAACATAAGGGAGAGTTA+GGG | + | chr7_4:34494169-34494188 | Msa1150700:intron | 40.0% | |
| ! | AAACTAGCCTAAGGTGGTTT+GGG | + | chr7_4:34494224-34494243 | Msa1150700:intron | 40.0% |
| TGTAAATTCCTCCTTCATCG+TGG | + | chr7_4:34494392-34494411 | Msa1150700:intron | 40.0% | |
| ACAGAAATACCGCAATTAGG+CGG | - | chr7_4:34494429-34494448 | None:intergenic | 40.0% | |
| GCAACAGAAATACCGCAATT+AGG | - | chr7_4:34494432-34494451 | None:intergenic | 40.0% | |
| !! | CAGTATAATGAAGGTGTTGG+AGG | - | chr7_4:34494466-34494485 | None:intergenic | 40.0% |
| CTCCAACACCTTCATTATAC+TGG | + | chr7_4:34494464-34494483 | Msa1150700:intron | 40.0% | |
| ! | AGCCAGTATAATGAAGGTGT+TGG | - | chr7_4:34494469-34494488 | None:intergenic | 40.0% |
| CTTCACAGCCAGTATAATGA+AGG | - | chr7_4:34494475-34494494 | None:intergenic | 40.0% | |
| ! | CTTCATTATACTGGCTGTGA+AGG | + | chr7_4:34494473-34494492 | Msa1150700:intron | 40.0% |
| ! | TCATTATACTGGCTGTGAAG+GGG | + | chr7_4:34494475-34494494 | Msa1150700:intron | 40.0% |
| GGCCATATCTCTTAACAATG+TGG | - | chr7_4:34494512-34494531 | None:intergenic | 40.0% | |
| !! | TAAACCGACTTGTAAGGTGA+GGG | - | chr7_4:34494557-34494576 | None:intergenic | 40.0% |
| !! | CCTTACTAAACCGACTTGTA+AGG | - | chr7_4:34494563-34494582 | None:intergenic | 40.0% |
| ! | CCTTACAAGTCGGTTTAGTA+AGG | + | chr7_4:34494560-34494579 | Msa1150700:intron | 40.0% |
| CGGTTTAGTAAGGATGAGTT+AGG | + | chr7_4:34494570-34494589 | Msa1150700:intron | 40.0% | |
| CTTATTTCCATAAGCGCACA+AGG | - | chr7_4:34494896-34494915 | None:intergenic | 40.0% | |
| TTTCTATGTGTGCAGTGTTG+GGG | + | chr7_4:34495166-34495185 | Msa1150700:intron | 40.0% | |
| GTTCAAGAATTTGGACAAGC+TGG | + | chr7_4:34495229-34495248 | Msa1150700:CDS | 40.0% | |
| !! | TTACCTCTTAGTTGATGAGC+TGG | - | chr7_4:34495306-34495325 | None:intergenic | 40.0% |
| TTACTTGGTTCATTGCTCCA+TGG | + | chr7_4:34495776-34495795 | Msa1150700:intron | 40.0% | |
| TACTTGGTTCATTGCTCCAT+GGG | + | chr7_4:34495777-34495796 | Msa1150700:intron | 40.0% | |
| GCTAATATAGCATTCACCCA+TGG | - | chr7_4:34495796-34495815 | None:intergenic | 40.0% | |
| ! | TCTTATCGAAGTGCTTCGTT+TGG | - | chr7_4:34495839-34495858 | None:intergenic | 40.0% |
| ! | AAACGAAGCACTTCGATAAG+AGG | + | chr7_4:34495838-34495857 | Msa1150700:intron | 40.0% |
| !! | GCGCACTATGATTTGTTTGA+AGG | - | chr7_4:34495872-34495891 | None:intergenic | 40.0% |
| ! | AGGATGTTGTTTACTAGACC+AGG | - | chr7_4:34495905-34495924 | None:intergenic | 40.0% |
| GGTCTAGTAAACAACATCCT+CGG | + | chr7_4:34495905-34495924 | Msa1150700:intron | 40.0% | |
| TTCTCCAACATCTTCCACAA+TGG | + | chr7_4:34496152-34496171 | Msa1150700:intron | 40.0% | |
| TGAATTAAGCTGGATGGAAG+AGG | - | chr7_4:34496271-34496290 | None:intergenic | 40.0% | |
| TAAGATGCTGGCATTACTGT+AGG | + | chr7_4:34496365-34496384 | Msa1150700:intron | 40.0% | |
| !!! | GGGCTCTAGTAATTTTTTCG+AGG | - | chr7_4:34496483-34496502 | None:intergenic | 40.0% |
| !! | TAGTCTGTAACTTGTTCTGG+AGG | - | chr7_4:34496728-34496747 | None:intergenic | 40.0% |
| TTTAAATGGACACCCGAATG+AGG | + | chr7_4:34496828-34496847 | Msa1150700:intron | 40.0% | |
| TGCATGTCAAACACCTCATT+CGG | - | chr7_4:34496844-34496863 | None:intergenic | 40.0% | |
| GTGTTTGACATGCACCTTAT+GGG | + | chr7_4:34496850-34496869 | Msa1150700:intron | 40.0% | |
| !! | GTGTTGGTTGTAGGATCTAT+GGG | + | chr7_4:34496872-34496891 | Msa1150700:intron | 40.0% |
| CAGAAACGCACTTCAATGAA+AGG | - | chr7_4:34497376-34497395 | None:intergenic | 40.0% | |
| !! | GGGTCCAATTAGTCTTGATT+TGG | - | chr7_4:34497455-34497474 | None:intergenic | 40.0% |
| ! | TGCATTGAGCATACTTGCTA+TGG | + | chr7_4:34497749-34497768 | Msa1150700:intron | 40.0% |
| !! | TCTGGTAGTGATCTTTTTCC+AGG | + | chr7_4:34498123-34498142 | Msa1150700:CDS | 40.0% |
| !! | CTGGTAGTGATCTTTTTCCA+GGG | + | chr7_4:34498124-34498143 | Msa1150700:CDS | 40.0% |
| ! | ATACCTTGACGGATACATAC+CGG | - | chr7_4:34498157-34498176 | None:intergenic | 40.0% |
| GAGACAAGAAATGTAACGTG+GGG | - | chr7_4:34498187-34498206 | None:intergenic | 40.0% | |
| TATGCACCACTCAATTTCAG+GGG | + | chr7_4:34498257-34498276 | Msa1150700:intron | 40.0% | |
| TTAAAGGCAACAAAACCCCA+AGG | + | chr7_4:34498449-34498468 | Msa1150700:intron | 40.0% | |
| ATATCTTGCAAGACACGTCT+AGG | - | chr7_4:34498597-34498616 | None:intergenic | 40.0% | |
| ! | TTTTAATGCCTAGAGGCAAG+AGG | - | chr7_4:34498676-34498695 | None:intergenic | 40.0% |
| !! | AACGGCATTTTAATGCCTAG+AGG | - | chr7_4:34498683-34498702 | None:intergenic | 40.0% |
| !! | AATACAAAAGGCACCCTCAA+AGG | - | chr7_4:34498710-34498729 | None:intergenic | 40.0% |
| TACCCTGTGATTGATACATG+TGG | + | chr7_4:34498734-34498753 | Msa1150700:intron | 40.0% | |
| CTCAACCATACCTAGCAAAT+CGG | - | chr7_4:34498869-34498888 | None:intergenic | 40.0% | |
| !! | TTCTAGGATTCCTGCAAGAT+AGG | - | chr7_4:34499057-34499076 | None:intergenic | 40.0% |
| TATCTTGCAGGAATCCTAGA+AGG | + | chr7_4:34499056-34499075 | Msa1150700:intron | 40.0% | |
| CTTCGGAAATGTTGCAAATC+TGG | - | chr7_4:34499100-34499119 | None:intergenic | 40.0% | |
| !! | TACTGCGAGGACTGATTTGT+CGG | - | chr7_4:34493174-34493193 | None:intergenic | 45.0% |
| !!! | TTTGTCGTTTTGGTTGCGGA+AGG | - | chr7_4:34493216-34493235 | None:intergenic | 45.0% |
| ATTAGAGGGGTTGGAAAGAG+CGG | - | chr7_4:34493318-34493337 | None:intergenic | 45.0% | |
| TGTTTACGCGAATTCGGAGA+AGG | + | chr7_4:34493482-34493501 | Msa1150700:CDS | 45.0% | |
| ! | GACTCTTCGATCAGAAGTGT+CGG | + | chr7_4:34493885-34493904 | Msa1150700:intron | 45.0% |
| ! | TGCAACTGGGTTTTCTGTGT+TGG | + | chr7_4:34493971-34493990 | Msa1150700:intron | 45.0% |
| ! | CTGGGTTTTCTGTGTTGGAT+TGG | + | chr7_4:34493976-34493995 | Msa1150700:intron | 45.0% |
| GGACAACATAAGGGAGAGTT+AGG | + | chr7_4:34494168-34494187 | Msa1150700:intron | 45.0% | |
| !! | AGATGGTGGAAACTAGCCTA+AGG | + | chr7_4:34494215-34494234 | Msa1150700:intron | 45.0% |
| ! | GAAACTAGCCTAAGGTGGTT+TGG | + | chr7_4:34494223-34494242 | Msa1150700:intron | 45.0% |
| GGTTTGGGCATGTAGAGAAA+AGG | + | chr7_4:34494239-34494258 | Msa1150700:intron | 45.0% | |
| GCATGTAGAGAAAAGGCTTG+TGG | + | chr7_4:34494246-34494265 | Msa1150700:intron | 45.0% | |
| ! | GGCTTGTGGATTGTGTAGTA+AGG | + | chr7_4:34494260-34494279 | Msa1150700:intron | 45.0% |
| AGTCGAATCACTAGTGACAG+AGG | + | chr7_4:34494304-34494323 | Msa1150700:intron | 45.0% | |
| !! | CTAAACCGACTTGTAAGGTG+AGG | - | chr7_4:34494558-34494577 | None:intergenic | 45.0% |
| TGTTGGATTGAATTCTGCCC+TGG | + | chr7_4:34494724-34494743 | Msa1150700:intron | 45.0% | |
| AACCTATCCTTGTGCGCTTA+TGG | + | chr7_4:34494886-34494905 | Msa1150700:intron | 45.0% | |
| TTCCATAAGCGCACAAGGAT+AGG | - | chr7_4:34494891-34494910 | None:intergenic | 45.0% | |
| !! | CTTAGTTGATGAGCTGGCAT+TGG | - | chr7_4:34495300-34495319 | None:intergenic | 45.0% |
| ATGCCAGCTCATCAACTAAG+AGG | + | chr7_4:34495300-34495319 | Msa1150700:CDS | 45.0% | |
| ATGCATACACGAACGAGTGA+TGG | + | chr7_4:34495527-34495546 | Msa1150700:intron | 45.0% | |
| GCGTTTGTAGCTATGTTCCA+TGG | - | chr7_4:34495629-34495648 | None:intergenic | 45.0% | |
| !!! | TAGTGCGCTTTTAGAACTCC+TGG | + | chr7_4:34495884-34495903 | Msa1150700:intron | 45.0% |
| CTAGTAAACAACATCCTCGG+TGG | + | chr7_4:34495908-34495927 | Msa1150700:intron | 45.0% | |
| ! | CTACATTGTCTGGGGCAATT+TGG | + | chr7_4:34496118-34496137 | Msa1150700:intron | 45.0% |
| GACACCATTGTGGAAGATGT+TGG | - | chr7_4:34496159-34496178 | None:intergenic | 45.0% | |
| TAAGCTGGATGGAAGAGGTT+GGG | - | chr7_4:34496266-34496285 | None:intergenic | 45.0% | |
| TTAAGCTGGATGGAAGAGGT+TGG | - | chr7_4:34496267-34496286 | None:intergenic | 45.0% | |
| GGTTGAACACTGTTGCATGT+TGG | - | chr7_4:34496595-34496614 | None:intergenic | 45.0% | |
| !! | GAAGGGTATCACATCCATGT+CGG | + | chr7_4:34496788-34496807 | Msa1150700:intron | 45.0% |
| GCATGTCAAACACCTCATTC+GGG | - | chr7_4:34496843-34496862 | None:intergenic | 45.0% | |
| GGTGTTTGACATGCACCTTA+TGG | + | chr7_4:34496849-34496868 | Msa1150700:intron | 45.0% | |
| !! | ACCTTATGGGTGTTGGTTGT+AGG | + | chr7_4:34496863-34496882 | Msa1150700:intron | 45.0% |
| TCCTACAACCAACACCCATA+AGG | - | chr7_4:34496867-34496886 | None:intergenic | 45.0% | |
| !! | GGTGTTGGTTGTAGGATCTA+TGG | + | chr7_4:34496871-34496890 | Msa1150700:intron | 45.0% |
| TCTGAACCTGTTCCTGGATT+TGG | + | chr7_4:34497091-34497110 | Msa1150700:CDS | 45.0% | |
| TGATAATCATGAGGACCAGC+AGG | - | chr7_4:34497121-34497140 | None:intergenic | 45.0% | |
| GTCCTCATGATTATCACCCT+GGG | + | chr7_4:34497125-34497144 | Msa1150700:CDS | 45.0% | |
| TACCCAGGGTGATAATCATG+AGG | - | chr7_4:34497130-34497149 | None:intergenic | 45.0% | |
| !! | ATTGGTTTGACCACCCTGTT+TGG | + | chr7_4:34497273-34497292 | Msa1150700:intron | 45.0% |
| !! | TGGTAATGGAGAAAACGGAG+AGG | + | chr7_4:34497514-34497533 | Msa1150700:intron | 45.0% |
| CATAAAGATAGCCCGGCATA+AGG | - | chr7_4:34497987-34498006 | None:intergenic | 45.0% | |
| AGGGGATCATAAAGATAGCC+CGG | - | chr7_4:34497994-34498013 | None:intergenic | 45.0% | |
| AAGATCACTACCAGAACCAG+CGG | - | chr7_4:34498118-34498137 | None:intergenic | 45.0% | |
| AAGAAATGTAACGTGGGGTG+GGG | - | chr7_4:34498182-34498201 | None:intergenic | 45.0% | |
| CAAGAAATGTAACGTGGGGT+GGG | - | chr7_4:34498183-34498202 | None:intergenic | 45.0% | |
| ACAAGAAATGTAACGTGGGG+TGG | - | chr7_4:34498184-34498203 | None:intergenic | 45.0% | |
| TGATCACCCCTGAAATTGAG+TGG | - | chr7_4:34498266-34498285 | None:intergenic | 45.0% | |
| TTCAGGGGTGATCATGACTT+TGG | + | chr7_4:34498272-34498291 | Msa1150700:intron | 45.0% | |
| AATCCTCCTCCAATAACACC+AGG | - | chr7_4:34498371-34498390 | None:intergenic | 45.0% | |
| TGCTAAGTCTAGGGAAAGGA+AGG | + | chr7_4:34498484-34498503 | Msa1150700:intron | 45.0% | |
| GCTAAGTCTAGGGAAAGGAA+GGG | + | chr7_4:34498485-34498504 | Msa1150700:intron | 45.0% | |
| ! | GGTCCACCGTATTTTGTAGA+GGG | + | chr7_4:34498506-34498525 | Msa1150700:intron | 45.0% |
| GTTCCCTCTACAAAATACGG+TGG | - | chr7_4:34498512-34498531 | None:intergenic | 45.0% | |
| GACTATCTTCATGGGGTGTA+TGG | + | chr7_4:34498641-34498660 | Msa1150700:intron | 45.0% | |
| ! | TTTTGTTGCCTCTTGCCTCT+AGG | + | chr7_4:34498665-34498684 | Msa1150700:intron | 45.0% |
| !! | TCTAAATAGGGGTGTTCCAC+CGG | + | chr7_4:34498791-34498810 | Msa1150700:intron | 45.0% |
| CCATACCTAGCAAATCGGTT+GGG | - | chr7_4:34498864-34498883 | None:intergenic | 45.0% | |
| ACCATACCTAGCAAATCGGT+TGG | - | chr7_4:34498865-34498884 | None:intergenic | 45.0% | |
| TCTGGATGAGCATCAAATCC+TGG | - | chr7_4:34499082-34499101 | None:intergenic | 45.0% | |
| GGAAATGGAAAGTGAGAGAG+AGG | - | chr7_4:34499166-34499185 | None:intergenic | 45.0% | |
| !! | ATATATATTATATTAATCAT+CGG | + | chr7_4:34499265-34499284 | Msa1150700:three_prime_UTR | 5.0% |
| GGTGTAAGTGTGGGTGTGTT+TGG | - | chr7_4:34493060-34493079 | None:intergenic | 50.0% | |
| ATGCTTCGCGGTGTAAGTGT+GGG | - | chr7_4:34493069-34493088 | None:intergenic | 50.0% | |
| ACGTCGTCGATCACCAACAA+TGG | + | chr7_4:34493145-34493164 | Msa1150700:exon | 50.0% | |
| GATTTGTCGGTGGCCATTGT+TGG | - | chr7_4:34493161-34493180 | None:intergenic | 50.0% | |
| !!! | TCGTTTTGGTTGCGGAAGGT+TGG | - | chr7_4:34493212-34493231 | None:intergenic | 50.0% |
| CACTCTTCTTTCCTCGCTTC+CGG | + | chr7_4:34493251-34493270 | Msa1150700:CDS | 50.0% | |
| GCTCTTTCCAACCCCTCTAA+TGG | + | chr7_4:34493317-34493336 | Msa1150700:CDS | 50.0% | |
| AGGGTTACCATTAGAGGGGT+TGG | - | chr7_4:34493327-34493346 | None:intergenic | 50.0% | |
| TTACGCGAATTCGGAGAAGG+AGG | + | chr7_4:34493485-34493504 | Msa1150700:CDS | 50.0% | |
| TACGCGAATTCGGAGAAGGA+GGG | + | chr7_4:34493486-34493505 | Msa1150700:CDS | 50.0% | |
| CAGAGAGACACGACACTTAC+AGG | + | chr7_4:34493790-34493809 | Msa1150700:intron | 50.0% | |
| GTAATCACATGTGTCCGACG+TGG | + | chr7_4:34493852-34493871 | Msa1150700:intron | 50.0% | |
| AGTCCAACCAATGTCCACGT+CGG | - | chr7_4:34493869-34493888 | None:intergenic | 50.0% | |
| CAGAGATGAGGTTGTTGCGT+TGG | + | chr7_4:34494110-34494129 | Msa1150700:intron | 50.0% | |
| AGGTTGTTGCGTTGGATGTG+TGG | + | chr7_4:34494118-34494137 | Msa1150700:intron | 50.0% | |
| ! | TGGTGGAAACTAGCCTAAGG+TGG | + | chr7_4:34494218-34494237 | Msa1150700:intron | 50.0% |
| CTACATGCCCAAACCACCTT+AGG | - | chr7_4:34494234-34494253 | None:intergenic | 50.0% | |
| ATACCGCAATTAGGCGGCTA+GGG | - | chr7_4:34494423-34494442 | None:intergenic | 50.0% | |
| AATACCGCAATTAGGCGGCT+AGG | - | chr7_4:34494424-34494443 | None:intergenic | 50.0% | |
| ! | TTATACTGGCTGTGAAGGGG+TGG | + | chr7_4:34494478-34494497 | Msa1150700:intron | 50.0% |
| ! | TATACTGGCTGTGAAGGGGT+GGG | + | chr7_4:34494479-34494498 | Msa1150700:intron | 50.0% |
| CATGCCCTCACCTTACAAGT+CGG | + | chr7_4:34494550-34494569 | Msa1150700:intron | 50.0% | |
| ATGTAGCTGACCCCACTTAG+CGG | + | chr7_4:34494625-34494644 | Msa1150700:intron | 50.0% | |
| ! | AAGCCTTATCCCGCTAAGTG+GGG | - | chr7_4:34494638-34494657 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCGCTAAGT+GGG | - | chr7_4:34494639-34494658 | None:intergenic | 50.0% |
| ! | TCAAGCCTTATCCCGCTAAG+TGG | - | chr7_4:34494640-34494659 | None:intergenic | 50.0% |
| GGATTGAATTCTGCCCTGGT+TGG | + | chr7_4:34494728-34494747 | Msa1150700:intron | 50.0% | |
| GACTATGCTGGAGAAGATGG+AGG | + | chr7_4:34495188-34495207 | Msa1150700:CDS | 50.0% | |
| GAAAGTCCAGCAGCTTTGCA+CGG | - | chr7_4:34495950-34495969 | None:intergenic | 50.0% | |
| ACGATGGATGGACACCATTG+TGG | - | chr7_4:34496169-34496188 | None:intergenic | 50.0% | |
| AAGCTGGATGGAAGAGGTTG+GGG | - | chr7_4:34496265-34496284 | None:intergenic | 50.0% | |
| GACATGCACCTTATGGGTGT+TGG | + | chr7_4:34496856-34496875 | Msa1150700:intron | 50.0% | |
| GAGACATCTGAACCTGTTCC+TGG | + | chr7_4:34497085-34497104 | Msa1150700:CDS | 50.0% | |
| GGTTCACCAAATCCAGGAAC+AGG | - | chr7_4:34497100-34497119 | None:intergenic | 50.0% | |
| GGTCCTCATGATTATCACCC+TGG | + | chr7_4:34497124-34497143 | Msa1150700:CDS | 50.0% | |
| AGATCACTACCAGAACCAGC+GGG | - | chr7_4:34498117-34498136 | None:intergenic | 50.0% | |
| ! | AGTGATCTTTTTCCAGGGCC+AGG | + | chr7_4:34498129-34498148 | Msa1150700:CDS | 50.0% |
| AGGGGTGATCATGACTTTGG+AGG | + | chr7_4:34498275-34498294 | Msa1150700:intron | 50.0% | |
| AGTACCACCACCAAACCAAC+GGG | - | chr7_4:34498327-34498346 | None:intergenic | 50.0% | |
| CAGTACCACCACCAAACCAA+CGG | - | chr7_4:34498328-34498347 | None:intergenic | 50.0% | |
| ACCCTTGGGTGCTAAGTCTA+GGG | + | chr7_4:34498475-34498494 | Msa1150700:intron | 50.0% | |
| TCCCTAGACTTAGCACCCAA+GGG | - | chr7_4:34498479-34498498 | None:intergenic | 50.0% | |
| TTCCCTAGACTTAGCACCCA+AGG | - | chr7_4:34498480-34498499 | None:intergenic | 50.0% | |
| TGGGTGCTAAGTCTAGGGAA+AGG | + | chr7_4:34498480-34498499 | Msa1150700:intron | 50.0% | |
| ! | GGGTCCACCGTATTTTGTAG+AGG | + | chr7_4:34498505-34498524 | Msa1150700:intron | 50.0% |
| ATCGCCAGCGACTATCTTCA+TGG | + | chr7_4:34498632-34498651 | Msa1150700:intron | 50.0% | |
| TCGCCAGCGACTATCTTCAT+GGG | + | chr7_4:34498633-34498652 | Msa1150700:intron | 50.0% | |
| AAATGCCGTTAGCGCCTTTG+AGG | + | chr7_4:34498693-34498712 | Msa1150700:intron | 50.0% | |
| AATGCCGTTAGCGCCTTTGA+GGG | + | chr7_4:34498694-34498713 | Msa1150700:intron | 50.0% | |
| !! | CTAAATAGGGGTGTTCCACC+GGG | + | chr7_4:34498792-34498811 | Msa1150700:intron | 50.0% |
| ATGGGATCAAATCGAGCACC+CGG | - | chr7_4:34498813-34498832 | None:intergenic | 50.0% | |
| ! | GGTGCTCGATTTGATCCCAT+TGG | + | chr7_4:34498813-34498832 | Msa1150700:CDS | 50.0% |
| TTTGATCCCATTGGACCTCC+TGG | + | chr7_4:34498822-34498841 | Msa1150700:CDS | 50.0% | |
| ATCGGTTGGGCTCAAAACCA+GGG | - | chr7_4:34498851-34498870 | None:intergenic | 50.0% | |
| AATCGGTTGGGCTCAAAACC+AGG | - | chr7_4:34498852-34498871 | None:intergenic | 50.0% | |
| !! | TTGAGCCCAACCGATTTGCT+AGG | + | chr7_4:34498856-34498875 | Msa1150700:CDS | 50.0% |
| !! | CCCAACCGATTTGCTAGGTA+TGG | + | chr7_4:34498861-34498880 | Msa1150700:intron | 50.0% |
| ! | GCATCAAATCCTGGCCTTCT+AGG | - | chr7_4:34499073-34499092 | None:intergenic | 50.0% |
| GATGCTTCGCGGTGTAAGTG+TGG | - | chr7_4:34493070-34493089 | None:intergenic | 55.0% | |
| !! | TGCGAGGACTGATTTGTCGG+TGG | - | chr7_4:34493171-34493190 | None:intergenic | 55.0% |
| TGAGGATGTAACCGGAAGCG+AGG | - | chr7_4:34493265-34493284 | None:intergenic | 55.0% | |
| AGTGGCGGTGAGGATGTAAC+CGG | - | chr7_4:34493273-34493292 | None:intergenic | 55.0% | |
| ! | GGAAAGAGCGGTATCGGAGA+GGG | - | chr7_4:34493306-34493325 | None:intergenic | 55.0% |
| ! | TGGAAAGAGCGGTATCGGAG+AGG | - | chr7_4:34493307-34493326 | None:intergenic | 55.0% |
| GGGGTTGGAAAGAGCGGTAT+CGG | - | chr7_4:34493312-34493331 | None:intergenic | 55.0% | |
| CATGTGTCCGACGTGGACAT+TGG | + | chr7_4:34493859-34493878 | Msa1150700:intron | 55.0% | |
| TGTCCGACGTGGACATTGGT+TGG | + | chr7_4:34493863-34493882 | Msa1150700:intron | 55.0% | |
| !! | CAGAAGTGTCGGTGCTACTG+AGG | + | chr7_4:34493896-34493915 | Msa1150700:intron | 55.0% |
| TACCGCAATTAGGCGGCTAG+GGG | - | chr7_4:34494422-34494441 | None:intergenic | 55.0% | |
| !! | GAAGGTGTTGGAGGCTGCAA+CGG | - | chr7_4:34494457-34494476 | None:intergenic | 55.0% |
| GCTAAGTGGGGTCAGCTACA+TGG | - | chr7_4:34494626-34494645 | None:intergenic | 55.0% | |
| TGTAGCTGACCCCACTTAGC+GGG | + | chr7_4:34494626-34494645 | Msa1150700:intron | 55.0% | |
| TGACCCCACTTAGCGGGATA+AGG | + | chr7_4:34494632-34494651 | Msa1150700:intron | 55.0% | |
| ! | TGCAGTGTTGGGGACTATGC+TGG | + | chr7_4:34495176-34495195 | Msa1150700:intron | 55.0% |
| GGGGACTATGCTGGAGAAGA+TGG | + | chr7_4:34495185-34495204 | Msa1150700:CDS | 55.0% | |
| GCTTTGCACGGAGAAGGGAT+GGG | - | chr7_4:34495938-34495957 | None:intergenic | 55.0% | |
| AGCTTTGCACGGAGAAGGGA+TGG | - | chr7_4:34495939-34495958 | None:intergenic | 55.0% | |
| CAGCAGCTTTGCACGGAGAA+GGG | - | chr7_4:34495943-34495962 | None:intergenic | 55.0% | |
| CCAGCAGGTTCACCAAATCC+AGG | - | chr7_4:34497106-34497125 | None:intergenic | 55.0% | |
| !! | CCTGGATTTGGTGAACCTGC+TGG | + | chr7_4:34497103-34497122 | Msa1150700:CDS | 55.0% |
| ! | GTGCCGGTATGTATCCGTCA+AGG | + | chr7_4:34498151-34498170 | Msa1150700:CDS | 55.0% |
| GGGGTGGGGTTATACCTTGA+CGG | - | chr7_4:34498168-34498187 | None:intergenic | 55.0% | |
| TTTGGAGGCAGCATGCTCGT+AGG | + | chr7_4:34498290-34498309 | Msa1150700:CDS | 55.0% | |
| TTGGAGGCAGCATGCTCGTA+GGG | + | chr7_4:34498291-34498310 | Msa1150700:CDS | 55.0% | |
| CCAAACCAACGGGGGTCATT+AGG | - | chr7_4:34498317-34498336 | None:intergenic | 55.0% | |
| ! | CCTAATGACCCCCGTTGGTT+TGG | + | chr7_4:34498314-34498333 | Msa1150700:CDS | 55.0% |
| !! | AATGACCCCCGTTGGTTTGG+TGG | + | chr7_4:34498317-34498336 | Msa1150700:CDS | 55.0% |
| TACCACCACCAAACCAACGG+GGG | - | chr7_4:34498325-34498344 | None:intergenic | 55.0% | |
| GTACCACCACCAAACCAACG+GGG | - | chr7_4:34498326-34498345 | None:intergenic | 55.0% | |
| !! | CGTTGGTTTGGTGGTGGTAC+TGG | + | chr7_4:34498326-34498345 | Msa1150700:CDS | 55.0% |
| !! | TGGTTTGGTGGTGGTACTGG+TGG | + | chr7_4:34498329-34498348 | Msa1150700:CDS | 55.0% |
| !! | TTTGGTGGTGGTACTGGTGG+AGG | + | chr7_4:34498332-34498351 | Msa1150700:CDS | 55.0% |
| !! | GGTGGTACTGGTGGAGGTAT+TGG | + | chr7_4:34498338-34498357 | Msa1150700:CDS | 55.0% |
| !! | GGTACTGGTGGAGGTATTGG+TGG | + | chr7_4:34498341-34498360 | Msa1150700:CDS | 55.0% |
| !! | ACTGGTGGAGGTATTGGTGG+AGG | + | chr7_4:34498344-34498363 | Msa1150700:CDS | 55.0% |
| !! | GGTGGAGGACCTGGTGTTAT+TGG | + | chr7_4:34498359-34498378 | Msa1150700:CDS | 55.0% |
| !! | GGAGGACCTGGTGTTATTGG+AGG | + | chr7_4:34498362-34498381 | Msa1150700:CDS | 55.0% |
| !! | GGACCTGGTGTTATTGGAGG+AGG | + | chr7_4:34498365-34498384 | Msa1150700:CDS | 55.0% |
| AAAACCCCAAGGCACACCCT+TGG | + | chr7_4:34498460-34498479 | Msa1150700:intron | 55.0% | |
| AAACCCCAAGGCACACCCTT+GGG | + | chr7_4:34498461-34498480 | Msa1150700:intron | 55.0% | |
| CACCCTTGGGTGCTAAGTCT+AGG | + | chr7_4:34498474-34498493 | Msa1150700:intron | 55.0% | |
| CGCCAGCGACTATCTTCATG+GGG | + | chr7_4:34498634-34498653 | Msa1150700:intron | 55.0% | |
| CACCCCATGAAGATAGTCGC+TGG | - | chr7_4:34498639-34498658 | None:intergenic | 55.0% | |
| TCAAAACCAGGGACACCAGG+AGG | - | chr7_4:34498840-34498859 | None:intergenic | 55.0% | |
| TGCAGGAATCCTAGAAGGCC+AGG | + | chr7_4:34499061-34499080 | Msa1150700:intron | 55.0% | |
| GGTTACATCCTCACCGCCAC+TGG | + | chr7_4:34493272-34493291 | Msa1150700:CDS | 60.0% | |
| CTAGGGGAGGACCACGATGA+AGG | - | chr7_4:34494406-34494425 | None:intergenic | 60.0% | |
| CTCCCCTAGCCGCCTAATTG+CGG | + | chr7_4:34494417-34494436 | Msa1150700:intron | 60.0% | |
| AAGGGATGGGAAAGCCACCG+AGG | - | chr7_4:34495925-34495944 | None:intergenic | 60.0% | |
| CCAGCAGCTTTGCACGGAGA+AGG | - | chr7_4:34495944-34495963 | None:intergenic | 60.0% | |
| CCTTCTCCGTGCAAAGCTGC+TGG | + | chr7_4:34495941-34495960 | Msa1150700:intron | 60.0% | |
| ATTGTCCCTCCAGTTCCCGC+TGG | + | chr7_4:34498099-34498118 | Msa1150700:CDS | 60.0% | |
| CAGAACCAGCGGGAACTGGA+GGG | - | chr7_4:34498107-34498126 | None:intergenic | 60.0% | |
| CTACCAGAACCAGCGGGAAC+TGG | - | chr7_4:34498111-34498130 | None:intergenic | 60.0% | |
| ! | CTTTTTCCAGGGCCAGGTGC+CGG | + | chr7_4:34498135-34498154 | Msa1150700:CDS | 60.0% |
| GACGGATACATACCGGCACC+TGG | - | chr7_4:34498150-34498169 | None:intergenic | 60.0% | |
| TAGGGCCTAATGACCCCCGT+TGG | + | chr7_4:34498309-34498328 | Msa1150700:CDS | 60.0% | |
| !! | GGAGGTATTGGTGGAGGACC+TGG | + | chr7_4:34498350-34498369 | Msa1150700:CDS | 60.0% |
| ! | AGCACCCAAGGGTGTGCCTT+GGG | - | chr7_4:34498468-34498487 | None:intergenic | 60.0% |
| ! | TAGCACCCAAGGGTGTGCCT+TGG | - | chr7_4:34498469-34498488 | None:intergenic | 60.0% |
| !! | GGCACCCTCAAAGGCGCTAA+CGG | - | chr7_4:34498701-34498720 | None:intergenic | 60.0% |
| GGATCAAATCGAGCACCCGG+TGG | - | chr7_4:34498810-34498829 | None:intergenic | 60.0% | |
| GGGACACCAGGAGGTCCAAT+GGG | - | chr7_4:34498831-34498850 | None:intergenic | 60.0% | |
| AGGGACACCAGGAGGTCCAA+TGG | - | chr7_4:34498832-34498851 | None:intergenic | 60.0% | |
| ATTGGACCTCCTGGTGTCCC+TGG | + | chr7_4:34498831-34498850 | Msa1150700:CDS | 60.0% | |
| GGCTCAAAACCAGGGACACC+AGG | - | chr7_4:34498843-34498862 | None:intergenic | 60.0% | |
| ! | GCGCGGCTCTGATTACTGCG+AGG | - | chr7_4:34493187-34493206 | None:intergenic | 65.0% |
| ! | GTTGCGGAAGGTTGGTCGCG+CGG | - | chr7_4:34493204-34493223 | None:intergenic | 65.0% |
| CTTGAGGACCAGTGGCGGTG+AGG | - | chr7_4:34493283-34493302 | None:intergenic | 65.0% | |
| GAGGGCTTGAGGACCAGTGG+CGG | - | chr7_4:34493288-34493307 | None:intergenic | 65.0% | |
| GGAGAGGGCTTGAGGACCAG+TGG | - | chr7_4:34493291-34493310 | None:intergenic | 65.0% | |
| ! | GCGGTATCGGAGAGGGCTTG+AGG | - | chr7_4:34493299-34493318 | None:intergenic | 65.0% |
| GGGGAGGACCACGATGAAGG+AGG | - | chr7_4:34494403-34494422 | None:intergenic | 65.0% | |
| CGCAATTAGGCGGCTAGGGG+AGG | - | chr7_4:34494419-34494438 | None:intergenic | 65.0% | |
| ! | GGTGTTGGAGGCTGCAACGG+AGG | - | chr7_4:34494454-34494473 | None:intergenic | 65.0% |
| CCAGAACCAGCGGGAACTGG+AGG | - | chr7_4:34498108-34498127 | None:intergenic | 65.0% | |
| !! | CCTCCAGTTCCCGCTGGTTC+TGG | + | chr7_4:34498105-34498124 | Msa1150700:CDS | 65.0% |
| TACATACCGGCACCTGGCCC+TGG | - | chr7_4:34498144-34498163 | None:intergenic | 65.0% | |
| !! | GACCCCCGTTGGTTTGGTGG+TGG | + | chr7_4:34498320-34498339 | Msa1150700:CDS | 65.0% |
| ! | GCACCCAAGGGTGTGCCTTG+GGG | - | chr7_4:34498467-34498486 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 34493054 | 34499408 | 34493054 | ID=Msa1150700;Name=Msa1150700 |
| chr7_4 | mRNA | 34493054 | 34499408 | 34493054 | ID=Msa1150700-mRNA-1;Parent=Msa1150700;Name=Msa1150700-mRNA-1;_AED=0.02;_eAED=0.02;_QI=110|1|1|1|1|1|8|264|310 |
| chr7_4 | exon | 34493054 | 34493338 | 34493054 | ID=Msa1150700-mRNA-1:exon:8179;Parent=Msa1150700-mRNA-1 |
| chr7_4 | exon | 34493433 | 34493607 | 34493433 | ID=Msa1150700-mRNA-1:exon:8180;Parent=Msa1150700-mRNA-1 |
| chr7_4 | exon | 34495181 | 34495321 | 34495181 | ID=Msa1150700-mRNA-1:exon:8181;Parent=Msa1150700-mRNA-1 |
| chr7_4 | exon | 34497057 | 34497146 | 34497057 | ID=Msa1150700-mRNA-1:exon:8182;Parent=Msa1150700-mRNA-1 |
| chr7_4 | exon | 34498095 | 34498172 | 34498095 | ID=Msa1150700-mRNA-1:exon:8183;Parent=Msa1150700-mRNA-1 |
| chr7_4 | exon | 34498277 | 34498393 | 34498277 | ID=Msa1150700-mRNA-1:exon:8184;Parent=Msa1150700-mRNA-1 |
| chr7_4 | exon | 34498800 | 34498877 | 34498800 | ID=Msa1150700-mRNA-1:exon:8185;Parent=Msa1150700-mRNA-1 |
| chr7_4 | exon | 34499066 | 34499408 | 34499066 | ID=Msa1150700-mRNA-1:exon:8186;Parent=Msa1150700-mRNA-1 |
| chr7_4 | five_prime_UTR | 34493054 | 34493163 | 34493054 | ID=Msa1150700-mRNA-1:five_prime_utr;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34493164 | 34493338 | 34493164 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34493433 | 34493607 | 34493433 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34495181 | 34495321 | 34495181 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34497057 | 34497146 | 34497057 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34498095 | 34498172 | 34498095 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34498277 | 34498393 | 34498277 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34498800 | 34498877 | 34498800 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | CDS | 34499066 | 34499144 | 34499066 | ID=Msa1150700-mRNA-1:cds;Parent=Msa1150700-mRNA-1 |
| chr7_4 | three_prime_UTR | 34499145 | 34499408 | 34499145 | ID=Msa1150700-mRNA-1:three_prime_utr;Parent=Msa1150700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
