Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340540 | XP_003624692.1 | 98.708 | 542 | 7 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1090 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340540 | sp|Q949Y5|EGY1_ARATH | 68.561 | 563 | 141 | 8 | 1 | 542 | 1 | 548 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340540 | A2Q1L2 | 98.708 | 542 | 7 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1090 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa1340540 | 0.812321 | 4.496991e-51 | -8.615850e-47 |
| Msa0001540 | Msa1340540 | 0.807172 | 5.754969e-50 | -8.615850e-47 |
| Msa0012380 | Msa1340540 | 0.828653 | 7.978488e-55 | -8.615850e-47 |
| Msa0024320 | Msa1340540 | 0.804371 | 2.230278e-49 | -8.615850e-47 |
| Msa0027030 | Msa1340540 | 0.803420 | 3.516468e-49 | -8.615850e-47 |
| Msa0037270 | Msa1340540 | 0.869579 | 2.784771e-66 | -8.615850e-47 |
| Msa0037300 | Msa1340540 | 0.831260 | 1.846315e-55 | -8.615850e-47 |
| Msa0038150 | Msa1340540 | 0.827099 | 1.885888e-54 | -8.615850e-47 |
| Msa0042210 | Msa1340540 | 0.826582 | 2.507153e-54 | -8.615850e-47 |
| Msa0042240 | Msa1340540 | 0.835948 | 1.246267e-56 | -8.615850e-47 |
| Msa0046050 | Msa1340540 | 0.836544 | 8.794424e-57 | -8.615850e-47 |
| Msa0047560 | Msa1340540 | 0.804090 | 2.552150e-49 | -8.615850e-47 |
| Msa0061060 | Msa1340540 | 0.816205 | 6.236301e-52 | -8.615850e-47 |
| Msa0064490 | Msa1340540 | 0.806321 | 8.707726e-50 | -8.615850e-47 |
| Msa0065400 | Msa1340540 | 0.818920 | 1.523450e-52 | -8.615850e-47 |
| Msa0065520 | Msa1340540 | 0.843434 | 1.404306e-58 | -8.615850e-47 |
| Msa0069070 | Msa1340540 | 0.815116 | 1.090209e-51 | -8.615850e-47 |
| Msa0069230 | Msa1340540 | 0.823575 | 1.286397e-53 | -8.615850e-47 |
| Msa0069540 | Msa1340540 | 0.800823 | 1.202747e-48 | -8.615850e-47 |
| Msa0075080 | Msa1340540 | 0.818866 | 1.567685e-52 | -8.615850e-47 |
| Msa0076100 | Msa1340540 | 0.813456 | 2.536956e-51 | -8.615850e-47 |
| Msa0076590 | Msa1340540 | 0.810865 | 9.321480e-51 | -8.615850e-47 |
| Msa0076600 | Msa1340540 | 0.826201 | 3.088785e-54 | -8.615850e-47 |
| Msa0081120 | Msa1340540 | 0.862116 | 6.364044e-64 | -8.615850e-47 |
| Msa0081790 | Msa1340540 | 0.847300 | 1.262109e-59 | -8.615850e-47 |
| Msa0085690 | Msa1340540 | 0.805343 | 1.397254e-49 | -8.615850e-47 |
| Msa0086620 | Msa1340540 | 0.824540 | 7.637439e-54 | -8.615850e-47 |
| Msa0089510 | Msa1340540 | 0.852717 | 3.843829e-61 | -8.615850e-47 |
| Msa0089520 | Msa1340540 | 0.853077 | 3.033309e-61 | -8.615850e-47 |
| Msa0095890 | Msa1340540 | 0.812398 | 4.326572e-51 | -8.615850e-47 |
| Msa0116200 | Msa1340540 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0603180 | Msa1340540 | 0.826098 | 3.268523e-54 | -8.615850e-47 |
| Msa0608780 | Msa1340540 | 0.856840 | 2.450525e-62 | -8.615850e-47 |
| Msa0614020 | Msa1340540 | 0.820030 | 8.506953e-53 | -8.615850e-47 |
| Msa0622250 | Msa1340540 | 0.814473 | 1.513268e-51 | -8.615850e-47 |
| Msa0622450 | Msa1340540 | 0.816063 | 6.708975e-52 | -8.615850e-47 |
| Msa0624700 | Msa1340540 | 0.811618 | 6.397980e-51 | -8.615850e-47 |
| Msa0636720 | Msa1340540 | 0.811721 | 6.076431e-51 | -8.615850e-47 |
| Msa0638500 | Msa1340540 | 0.821568 | 3.768451e-53 | -8.615850e-47 |
| Msa0644220 | Msa1340540 | 0.860943 | 1.451243e-63 | -8.615850e-47 |
| Msa0644630 | Msa1340540 | 0.838920 | 2.158378e-57 | -8.615850e-47 |
| Msa0646190 | Msa1340540 | 0.805449 | 1.327532e-49 | -8.615850e-47 |
| Msa0649250 | Msa1340540 | 0.851542 | 8.296127e-61 | -8.615850e-47 |
| Msa0654560 | Msa1340540 | 0.818560 | 1.839097e-52 | -8.615850e-47 |
| Msa0660070 | Msa1340540 | 0.824371 | 8.368694e-54 | -8.615850e-47 |
| Msa0662230 | Msa1340540 | 0.819672 | 1.026925e-52 | -8.615850e-47 |
| Msa0677250 | Msa1340540 | 0.821620 | 3.665333e-53 | -8.615850e-47 |
| Msa0683150 | Msa1340540 | 0.819724 | 9.994153e-53 | -8.615850e-47 |
| Msa0683610 | Msa1340540 | 0.800460 | 1.426272e-48 | -8.615850e-47 |
| Msa0684030 | Msa1340540 | 0.855514 | 5.995649e-62 | -8.615850e-47 |
| Msa0684520 | Msa1340540 | 0.822064 | 2.892882e-53 | -8.615850e-47 |
| Msa0692480 | Msa1340540 | 0.815042 | 1.131835e-51 | -8.615850e-47 |
| Msa0693050 | Msa1340540 | 0.800050 | 1.728641e-48 | -8.615850e-47 |
| Msa0695470 | Msa1340540 | 0.804404 | 2.195891e-49 | -8.615850e-47 |
| Msa0697180 | Msa1340540 | 0.823205 | 1.570052e-53 | -8.615850e-47 |
| Msa0702360 | Msa1340540 | 0.823038 | 1.717572e-53 | -8.615850e-47 |
| Msa0702560 | Msa1340540 | 0.823914 | 1.071766e-53 | -8.615850e-47 |
| Msa0705810 | Msa1340540 | 0.807581 | 4.713176e-50 | -8.615850e-47 |
| Msa0706130 | Msa1340540 | 0.817764 | 2.784013e-52 | -8.615850e-47 |
| Msa0706790 | Msa1340540 | 0.805585 | 1.243285e-49 | -8.615850e-47 |
| Msa0706860 | Msa1340540 | 0.810978 | 8.808165e-51 | -8.615850e-47 |
| Msa0707170 | Msa1340540 | 0.810126 | 1.346164e-50 | -8.615850e-47 |
| Msa0707880 | Msa1340540 | 0.800832 | 1.197622e-48 | -8.615850e-47 |
| Msa0708360 | Msa1340540 | 0.809394 | 1.933960e-50 | -8.615850e-47 |
| Msa0713570 | Msa1340540 | 0.822804 | 1.946662e-53 | -8.615850e-47 |
| Msa0717540 | Msa1340540 | 0.801913 | 7.195558e-49 | -8.615850e-47 |
| Msa0738280 | Msa1340540 | 0.807701 | 4.445884e-50 | -8.615850e-47 |
| Msa0742090 | Msa1340540 | 0.832161 | 1.107225e-55 | -8.615850e-47 |
| Msa0745010 | Msa1340540 | 0.835378 | 1.737405e-56 | -8.615850e-47 |
| Msa0748330 | Msa1340540 | 0.818143 | 2.285713e-52 | -8.615850e-47 |
| Msa0750200 | Msa1340540 | 0.816695 | 4.843769e-52 | -8.615850e-47 |
| Msa0751540 | Msa1340540 | 0.823395 | 1.417824e-53 | -8.615850e-47 |
| Msa0753590 | Msa1340540 | 0.820880 | 5.428849e-53 | -8.615850e-47 |
| Msa0754880 | Msa1340540 | 0.819046 | 1.426238e-52 | -8.615850e-47 |
| Msa0755550 | Msa1340540 | 0.819239 | 1.289245e-52 | -8.615850e-47 |
| Msa0758880 | Msa1340540 | 0.816959 | 4.225123e-52 | -8.615850e-47 |
| Msa0766950 | Msa1340540 | 0.835767 | 1.385394e-56 | -8.615850e-47 |
| Msa0767040 | Msa1340540 | 0.822001 | 2.991577e-53 | -8.615850e-47 |
| Msa0784780 | Msa1340540 | 0.804226 | 2.390858e-49 | -8.615850e-47 |
| Msa0788160 | Msa1340540 | 0.803496 | 3.391213e-49 | -8.615850e-47 |
| Msa0790380 | Msa1340540 | 0.826582 | 2.507153e-54 | -8.615850e-47 |
| Msa0790650 | Msa1340540 | 0.829624 | 4.637452e-55 | -8.615850e-47 |
| Msa0792180 | Msa1340540 | 0.803156 | 3.987373e-49 | -8.615850e-47 |
| Msa0793100 | Msa1340540 | 0.850979 | 1.196293e-60 | -8.615850e-47 |
| Msa0793530 | Msa1340540 | 0.818202 | 2.216967e-52 | -8.615850e-47 |
| Msa0795850 | Msa1340540 | 0.839713 | 1.344280e-57 | -8.615850e-47 |
| Msa0796840 | Msa1340540 | 0.812151 | 4.898087e-51 | -8.615850e-47 |
| Msa0797180 | Msa1340540 | 0.823272 | 1.514706e-53 | -8.615850e-47 |
| Msa0801920 | Msa1340540 | 0.819871 | 9.248523e-53 | -8.615850e-47 |
| Msa0817810 | Msa1340540 | 0.811852 | 5.690923e-51 | -8.615850e-47 |
| Msa0817880 | Msa1340540 | 0.830102 | 3.547727e-55 | -8.615850e-47 |
| Msa0823310 | Msa1340540 | 0.849830 | 2.512814e-60 | -8.615850e-47 |
| Msa0827340 | Msa1340540 | 0.827155 | 1.829164e-54 | -8.615850e-47 |
| Msa0833200 | Msa1340540 | 0.808780 | 2.617073e-50 | -8.615850e-47 |
| Msa0833630 | Msa1340540 | 0.804546 | 2.050877e-49 | -8.615850e-47 |
| Msa0833980 | Msa1340540 | 0.807364 | 5.241761e-50 | -8.615850e-47 |
| Msa0835050 | Msa1340540 | 0.825914 | 3.614489e-54 | -8.615850e-47 |
| Msa0838120 | Msa1340540 | 0.815849 | 7.489309e-52 | -8.615850e-47 |
| Msa0122170 | Msa1340540 | 0.856758 | 2.590351e-62 | -8.615850e-47 |
| Msa0122930 | Msa1340540 | 0.838368 | 2.998262e-57 | -8.615850e-47 |
| Msa0123960 | Msa1340540 | 0.841546 | 4.449185e-58 | -8.615850e-47 |
| Msa0124460 | Msa1340540 | 0.817092 | 3.945240e-52 | -8.615850e-47 |
| Msa0127120 | Msa1340540 | 0.813462 | 2.528882e-51 | -8.615850e-47 |
| Msa0133390 | Msa1340540 | 0.809993 | 1.437425e-50 | -8.615850e-47 |
| Msa0142390 | Msa1340540 | 0.813778 | 2.154927e-51 | -8.615850e-47 |
| Msa0145590 | Msa1340540 | 0.801763 | 7.723971e-49 | -8.615850e-47 |
| Msa0157030 | Msa1340540 | 0.864477 | 1.181954e-64 | -8.615850e-47 |
| Msa0160120 | Msa1340540 | 0.805229 | 1.476299e-49 | -8.615850e-47 |
| Msa0163400 | Msa1340540 | 0.804361 | 2.241465e-49 | -8.615850e-47 |
| Msa0167150 | Msa1340540 | 0.804363 | 2.239160e-49 | -8.615850e-47 |
| Msa0168950 | Msa1340540 | 0.802708 | 4.936045e-49 | -8.615850e-47 |
| Msa0175210 | Msa1340540 | 0.828562 | 8.392344e-55 | -8.615850e-47 |
| Msa0178020 | Msa1340540 | 0.833998 | 3.863695e-56 | -8.615850e-47 |
| Msa0179200 | Msa1340540 | 0.801430 | 9.036973e-49 | -8.615850e-47 |
| Msa0181560 | Msa1340540 | 0.827053 | 1.934932e-54 | -8.615850e-47 |
| Msa0182610 | Msa1340540 | 0.807592 | 4.689349e-50 | -8.615850e-47 |
| Msa0184800 | Msa1340540 | 0.815968 | 7.042806e-52 | -8.615850e-47 |
| Msa0184900 | Msa1340540 | 0.825255 | 5.177876e-54 | -8.615850e-47 |
| Msa0185540 | Msa1340540 | 0.835030 | 2.127141e-56 | -8.615850e-47 |
| Msa0186510 | Msa1340540 | 0.802506 | 5.432423e-49 | -8.615850e-47 |
| Msa0188670 | Msa1340540 | 0.816845 | 4.482981e-52 | -8.615850e-47 |
| Msa0191180 | Msa1340540 | 0.820531 | 6.530092e-53 | -8.615850e-47 |
| Msa0198280 | Msa1340540 | 0.800976 | 1.119562e-48 | -8.615850e-47 |
| Msa0199490 | Msa1340540 | 0.854404 | 1.259141e-61 | -8.615850e-47 |
| Msa0213510 | Msa1340540 | 0.807337 | 5.309444e-50 | -8.615850e-47 |
| Msa0215510 | Msa1340540 | 0.814132 | 1.799780e-51 | -8.615850e-47 |
| Msa0216390 | Msa1340540 | 0.834226 | 3.386778e-56 | -8.615850e-47 |
| Msa0217300 | Msa1340540 | 0.803011 | 4.273041e-49 | -8.615850e-47 |
| Msa0224180 | Msa1340540 | 0.820343 | 7.213830e-53 | -8.615850e-47 |
| Msa0225080 | Msa1340540 | 0.806803 | 6.888278e-50 | -8.615850e-47 |
| Msa1224820 | Msa1340540 | 0.829644 | 4.587108e-55 | -8.615850e-47 |
| Msa1225560 | Msa1340540 | -0.804054 | 2.597199e-49 | -8.615850e-47 |
| Msa1228350 | Msa1340540 | 0.849660 | 2.804435e-60 | -8.615850e-47 |
| Msa1228460 | Msa1340540 | 0.848155 | 7.340486e-60 | -8.615850e-47 |
| Msa1239900 | Msa1340540 | 0.807190 | 5.704937e-50 | -8.615850e-47 |
| Msa1244380 | Msa1340540 | 0.815576 | 8.611281e-52 | -8.615850e-47 |
| Msa1246830 | Msa1340540 | -0.806438 | 8.226469e-50 | -8.615850e-47 |
| Msa1255030 | Msa1340540 | 0.828505 | 8.662410e-55 | -8.615850e-47 |
| Msa1257860 | Msa1340540 | 0.806255 | 8.988832e-50 | -8.615850e-47 |
| Msa1266750 | Msa1340540 | 0.804225 | 2.392838e-49 | -8.615850e-47 |
| Msa1267560 | Msa1340540 | 0.807831 | 4.171319e-50 | -8.615850e-47 |
| Msa1269730 | Msa1340540 | 0.836007 | 1.204254e-56 | -8.615850e-47 |
| Msa1291070 | Msa1340540 | 0.801341 | 9.426226e-49 | -8.615850e-47 |
| Msa1298170 | Msa1340540 | 0.800721 | 1.261815e-48 | -8.615850e-47 |
| Msa1298180 | Msa1340540 | 0.813925 | 1.999378e-51 | -8.615850e-47 |
| Msa1301610 | Msa1340540 | 0.805807 | 1.116661e-49 | -8.615850e-47 |
| Msa1303690 | Msa1340540 | 0.805240 | 1.468374e-49 | -8.615850e-47 |
| Msa1305650 | Msa1340540 | 0.802060 | 6.710886e-49 | -8.615850e-47 |
| Msa1312800 | Msa1340540 | 0.800930 | 1.143698e-48 | -8.615850e-47 |
| Msa1325260 | Msa1340540 | 0.802062 | 6.703412e-49 | -8.615850e-47 |
| Msa1331530 | Msa1340540 | 0.800083 | 1.702348e-48 | -8.615850e-47 |
| Msa1338600 | Msa1340540 | 0.809364 | 1.962198e-50 | -8.615850e-47 |
| Msa1340540 | Msa1342110 | 0.804261 | 2.351026e-49 | -8.615850e-47 |
| Msa1340540 | Msa1350130 | 0.814404 | 1.567596e-51 | -8.615850e-47 |
| Msa1340540 | Msa1355540 | -0.810558 | 1.085739e-50 | -8.615850e-47 |
| Msa1340540 | Msa1358340 | 0.823109 | 1.652921e-53 | -8.615850e-47 |
| Msa1340540 | Msa1359890 | 0.824806 | 6.610730e-54 | -8.615850e-47 |
| Msa1340540 | Msa1363170 | 0.806845 | 6.749129e-50 | -8.615850e-47 |
| Msa1340540 | Msa1367560 | 0.820734 | 5.865483e-53 | -8.615850e-47 |
| Msa1340540 | Msa1368150 | 0.805011 | 1.639888e-49 | -8.615850e-47 |
| Msa1340540 | Msa1369180 | 0.817235 | 3.663795e-52 | -8.615850e-47 |
| Msa1340540 | Msa1373390 | 0.828573 | 8.338542e-55 | -8.615850e-47 |
| Msa1340540 | Msa1375570 | 0.816953 | 4.238902e-52 | -8.615850e-47 |
| Msa1340540 | Msa1375650 | 0.823582 | 1.282039e-53 | -8.615850e-47 |
| Msa1340540 | Msa1375780 | 0.812287 | 4.574524e-51 | -8.615850e-47 |
| Msa1340540 | Msa1376510 | 0.815605 | 8.485941e-52 | -8.615850e-47 |
| Msa1340540 | Msa1376560 | 0.823303 | 1.489273e-53 | -8.615850e-47 |
| Msa1340540 | Msa1376680 | 0.844117 | 9.220262e-59 | -8.615850e-47 |
| Msa1340540 | Msa1379270 | 0.807641 | 4.578186e-50 | -8.615850e-47 |
| Msa1340540 | Msa1381060 | 0.806721 | 7.168757e-50 | -8.615850e-47 |
| Msa1340540 | Msa1388010 | 0.833977 | 3.910754e-56 | -8.615850e-47 |
| Msa1340540 | Msa1395430 | 0.818452 | 1.946074e-52 | -8.615850e-47 |
| Msa1340540 | Msa1400830 | 0.844020 | 9.789374e-59 | -8.615850e-47 |
| Msa1340540 | Msa1403590 | 0.830778 | 2.424383e-55 | -8.615850e-47 |
| Msa1340540 | Msa1403820 | 0.810279 | 1.247299e-50 | -8.615850e-47 |
| Msa1340540 | Msa1405380 | 0.837924 | 3.899443e-57 | -8.615850e-47 |
| Msa1340540 | Msa1409530 | 0.808779 | 2.618696e-50 | -8.615850e-47 |
| Msa1340540 | Msa1411390 | 0.835128 | 2.009552e-56 | -8.615850e-47 |
| Msa1340540 | Msa1412330 | 0.810026 | 1.414273e-50 | -8.615850e-47 |
| Msa1340540 | Msa1412810 | 0.806302 | 8.787911e-50 | -8.615850e-47 |
| Msa1340540 | Msa1418600 | 0.803231 | 3.847190e-49 | -8.615850e-47 |
| Msa1340540 | Msa1429180 | 0.820185 | 7.839808e-53 | -8.615850e-47 |
| Msa1340540 | Msa1439000 | 0.802991 | 4.314165e-49 | -8.615850e-47 |
| Msa1340540 | Msa1439880 | 0.833115 | 6.417834e-56 | -8.615850e-47 |
| Msa1340540 | Msa1443280 | 0.824082 | 9.788530e-54 | -8.615850e-47 |
| Msa1340540 | Msa1449270 | 0.804157 | 2.472272e-49 | -8.615850e-47 |
| Msa1340540 | Msa1452560 | 0.822729 | 2.026541e-53 | -8.615850e-47 |
| Msa1340540 | Msa1452800 | 0.801736 | 7.820783e-49 | -8.615850e-47 |
| Msa1340540 | Msa1453540 | 0.815831 | 7.556488e-52 | -8.615850e-47 |
| Msa1340540 | Msa1456620 | 0.828745 | 7.577115e-55 | -8.615850e-47 |
| Msa1340540 | Msa1460340 | 0.821105 | 4.818462e-53 | -8.615850e-47 |
| Msa1340540 | Msa1461660 | -0.803403 | 3.544886e-49 | -8.615850e-47 |
| Msa1340540 | Msa1462700 | 0.808825 | 2.560887e-50 | -8.615850e-47 |
| Msa0367380 | Msa1340540 | 0.816906 | 4.342260e-52 | -8.615850e-47 |
| Msa0369100 | Msa1340540 | 0.805486 | 1.304536e-49 | -8.615850e-47 |
| Msa0371010 | Msa1340540 | 0.814860 | 1.242492e-51 | -8.615850e-47 |
| Msa0374400 | Msa1340540 | 0.801803 | 7.578221e-49 | -8.615850e-47 |
| Msa0377990 | Msa1340540 | 0.805647 | 1.206677e-49 | -8.615850e-47 |
| Msa0378530 | Msa1340540 | 0.804148 | 2.482290e-49 | -8.615850e-47 |
| Msa0380270 | Msa1340540 | 0.822647 | 2.118024e-53 | -8.615850e-47 |
| Msa0380390 | Msa1340540 | 0.853577 | 2.180032e-61 | -8.615850e-47 |
| Msa0380440 | Msa1340540 | 0.814115 | 1.815287e-51 | -8.615850e-47 |
| Msa0380470 | Msa1340540 | 0.802518 | 5.400230e-49 | -8.615850e-47 |
| Msa0382050 | Msa1340540 | 0.821904 | 3.150534e-53 | -8.615850e-47 |
| Msa0386230 | Msa1340540 | 0.811561 | 6.582082e-51 | -8.615850e-47 |
| Msa0387970 | Msa1340540 | 0.804094 | 2.547995e-49 | -8.615850e-47 |
| Msa0390760 | Msa1340540 | 0.817665 | 2.931296e-52 | -8.615850e-47 |
| Msa0392540 | Msa1340540 | 0.803595 | 3.234598e-49 | -8.615850e-47 |
| Msa0393880 | Msa1340540 | 0.838469 | 2.822452e-57 | -8.615850e-47 |
| Msa0404070 | Msa1340540 | 0.827590 | 1.438098e-54 | -8.615850e-47 |
| Msa0420300 | Msa1340540 | 0.812886 | 3.382542e-51 | -8.615850e-47 |
| Msa0424220 | Msa1340540 | 0.805992 | 1.021085e-49 | -8.615850e-47 |
| Msa0425150 | Msa1340540 | 0.804526 | 2.070791e-49 | -8.615850e-47 |
| Msa0425810 | Msa1340540 | 0.836080 | 1.153596e-56 | -8.615850e-47 |
| Msa0428280 | Msa1340540 | 0.812920 | 3.325521e-51 | -8.615850e-47 |
| Msa0428300 | Msa1340540 | 0.802712 | 4.924834e-49 | -8.615850e-47 |
| Msa0431270 | Msa1340540 | 0.812466 | 4.181044e-51 | -8.615850e-47 |
| Msa0431550 | Msa1340540 | 0.828136 | 1.063270e-54 | -8.615850e-47 |
| Msa0436660 | Msa1340540 | 0.807642 | 4.575203e-50 | -8.615850e-47 |
| Msa0437790 | Msa1340540 | 0.834604 | 2.722217e-56 | -8.615850e-47 |
| Msa0438990 | Msa1340540 | 0.815890 | 7.331124e-52 | -8.615850e-47 |
| Msa0440720 | Msa1340540 | 0.831913 | 1.274720e-55 | -8.615850e-47 |
| Msa0441670 | Msa1340540 | 0.810476 | 1.131073e-50 | -8.615850e-47 |
| Msa0448880 | Msa1340540 | 0.804507 | 2.089930e-49 | -8.615850e-47 |
| Msa0453610 | Msa1340540 | 0.832093 | 1.150921e-55 | -8.615850e-47 |
| Msa0462240 | Msa1340540 | 0.819415 | 1.175329e-52 | -8.615850e-47 |
| Msa0471130 | Msa1340540 | 0.805656 | 1.201683e-49 | -8.615850e-47 |
| Msa0472570 | Msa1340540 | 0.844583 | 6.910415e-59 | -8.615850e-47 |
| Msa0476140 | Msa1340540 | 0.831746 | 1.401298e-55 | -8.615850e-47 |
| Msa0476560 | Msa1340540 | 0.832546 | 8.885894e-56 | -8.615850e-47 |
| Msa0479890 | Msa1340540 | 0.806620 | 7.530641e-50 | -8.615850e-47 |
| Msa0980980 | Msa1340540 | 0.802533 | 5.362002e-49 | -8.615850e-47 |
| Msa0998660 | Msa1340540 | 0.809816 | 1.569655e-50 | -8.615850e-47 |
| Msa1013560 | Msa1340540 | 0.817816 | 2.710294e-52 | -8.615850e-47 |
| Msa1015220 | Msa1340540 | 0.812044 | 5.168555e-51 | -8.615850e-47 |
| Msa1028890 | Msa1340540 | 0.809932 | 1.482079e-50 | -8.615850e-47 |
| Msa1031190 | Msa1340540 | 0.800586 | 1.344256e-48 | -8.615850e-47 |
| Msa1032410 | Msa1340540 | 0.815952 | 7.102316e-52 | -8.615850e-47 |
| Msa1033250 | Msa1340540 | 0.832255 | 1.049252e-55 | -8.615850e-47 |
| Msa1036260 | Msa1340540 | 0.803730 | 3.031999e-49 | -8.615850e-47 |
| Msa1037440 | Msa1340540 | 0.824239 | 8.989674e-54 | -8.615850e-47 |
| Msa1038530 | Msa1340540 | 0.849597 | 2.919904e-60 | -8.615850e-47 |
| Msa1040070 | Msa1340540 | 0.802433 | 5.624036e-49 | -8.615850e-47 |
| Msa1040390 | Msa1340540 | 0.805736 | 1.155697e-49 | -8.615850e-47 |
| Msa1056790 | Msa1340540 | 0.805262 | 1.453533e-49 | -8.615850e-47 |
| Msa1068010 | Msa1340540 | 0.818754 | 1.661857e-52 | -8.615850e-47 |
| Msa1070370 | Msa1340540 | 0.801574 | 8.444939e-49 | -8.615850e-47 |
| Msa1072000 | Msa1340540 | 0.971500 | 2.920905e-133 | -8.615850e-47 |
| Msa1072850 | Msa1340540 | 0.831835 | 1.332238e-55 | -8.615850e-47 |
| Msa1073670 | Msa1340540 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
| Msa1078600 | Msa1340540 | 0.803222 | 3.863389e-49 | -8.615850e-47 |
| Msa1078770 | Msa1340540 | 0.806367 | 8.514567e-50 | -8.615850e-47 |
| Msa1083140 | Msa1340540 | 0.822862 | 1.887113e-53 | -8.615850e-47 |
| Msa1095880 | Msa1340540 | 0.810285 | 1.243977e-50 | -8.615850e-47 |
| Msa0253320 | Msa1340540 | 0.801914 | 7.191273e-49 | -8.615850e-47 |
| Msa0255770 | Msa1340540 | 0.841531 | 4.490718e-58 | -8.615850e-47 |
| Msa0256590 | Msa1340540 | 0.842189 | 3.010426e-58 | -8.615850e-47 |
| Msa0259570 | Msa1340540 | 0.816951 | 4.244427e-52 | -8.615850e-47 |
| Msa0264710 | Msa1340540 | -0.814279 | 1.670582e-51 | -8.615850e-47 |
| Msa0269370 | Msa1340540 | 0.801680 | 8.032437e-49 | -8.615850e-47 |
| Msa0270230 | Msa1340540 | 0.815435 | 9.256867e-52 | -8.615850e-47 |
| Msa0295730 | Msa1340540 | 0.824307 | 8.664829e-54 | -8.615850e-47 |
| Msa0302750 | Msa1340540 | -0.810175 | 1.313392e-50 | -8.615850e-47 |
| Msa0306160 | Msa1340540 | 0.861916 | 7.330072e-64 | -8.615850e-47 |
| Msa0307820 | Msa1340540 | 0.814987 | 1.164343e-51 | -8.615850e-47 |
| Msa0313550 | Msa1340540 | 0.817060 | 4.010576e-52 | -8.615850e-47 |
| Msa0319340 | Msa1340540 | 0.842069 | 3.238079e-58 | -8.615850e-47 |
| Msa0330970 | Msa1340540 | 0.810183 | 1.308166e-50 | -8.615850e-47 |
| Msa0333350 | Msa1340540 | 0.807606 | 4.656208e-50 | -8.615850e-47 |
| Msa0333980 | Msa1340540 | 0.858043 | 1.080051e-62 | -8.615850e-47 |
| Msa0334280 | Msa1340540 | 0.818422 | 1.977010e-52 | -8.615850e-47 |
| Msa0346050 | Msa1340540 | 0.801300 | 9.607796e-49 | -8.615850e-47 |
| Msa0347280 | Msa1340540 | 0.806672 | 7.343441e-50 | -8.615850e-47 |
| Msa1113460 | Msa1340540 | 0.824231 | 9.030234e-54 | -8.615850e-47 |
| Msa1118460 | Msa1340540 | 0.950045 | 3.697561e-108 | -8.615850e-47 |
| Msa1122710 | Msa1340540 | 0.802514 | 5.411335e-49 | -8.615850e-47 |
| Msa1123260 | Msa1340540 | 0.806304 | 8.776881e-50 | -8.615850e-47 |
| Msa1127900 | Msa1340540 | 0.840938 | 6.430659e-58 | -8.615850e-47 |
| Msa1128200 | Msa1340540 | 0.844113 | 9.241810e-59 | -8.615850e-47 |
| Msa1129200 | Msa1340540 | 0.823699 | 1.203604e-53 | -8.615850e-47 |
| Msa1129880 | Msa1340540 | 0.813995 | 1.930282e-51 | -8.615850e-47 |
| Msa1130850 | Msa1340540 | 0.815372 | 9.560300e-52 | -8.615850e-47 |
| Msa1131300 | Msa1340540 | 0.836161 | 1.100488e-56 | -8.615850e-47 |
| Msa1132250 | Msa1340540 | 0.801794 | 7.612115e-49 | -8.615850e-47 |
| Msa1156430 | Msa1340540 | 0.833154 | 6.275081e-56 | -8.615850e-47 |
| Msa1158180 | Msa1340540 | 0.801181 | 1.016424e-48 | -8.615850e-47 |
| Msa1165810 | Msa1340540 | 0.807584 | 4.706703e-50 | -8.615850e-47 |
| Msa1169600 | Msa1340540 | 0.809764 | 1.610312e-50 | -8.615850e-47 |
| Msa1172940 | Msa1340540 | 0.824024 | 1.009984e-53 | -8.615850e-47 |
| Msa1184010 | Msa1340540 | 0.818653 | 1.751923e-52 | -8.615850e-47 |
| Msa1191960 | Msa1340540 | 0.808630 | 2.818556e-50 | -8.615850e-47 |
| Msa1202220 | Msa1340540 | 0.805554 | 1.262342e-49 | -8.615850e-47 |
| Msa1203320 | Msa1340540 | 0.815697 | 8.093479e-52 | -8.615850e-47 |
| Msa1204870 | Msa1340540 | 0.803016 | 4.262806e-49 | -8.615850e-47 |
| Msa1208630 | Msa1340540 | 0.821766 | 3.391469e-53 | -8.615850e-47 |
| Msa1215540 | Msa1340540 | 0.802938 | 4.424205e-49 | -8.615850e-47 |
| Msa1222900 | Msa1340540 | 0.817332 | 3.483649e-52 | -8.615850e-47 |
| Msa0485210 | Msa1340540 | 0.812398 | 4.325692e-51 | -8.615850e-47 |
| Msa0489330 | Msa1340540 | 0.810688 | 1.017854e-50 | -8.615850e-47 |
| Msa0492330 | Msa1340540 | 0.802366 | 5.804961e-49 | -8.615850e-47 |
| Msa0498250 | Msa1340540 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0500580 | Msa1340540 | 0.807018 | 6.203860e-50 | -8.615850e-47 |
| Msa0504310 | Msa1340540 | 0.806313 | 8.739713e-50 | -8.615850e-47 |
| Msa0506700 | Msa1340540 | 0.810578 | 1.075301e-50 | -8.615850e-47 |
| Msa0514630 | Msa1340540 | 0.842582 | 2.368459e-58 | -8.615850e-47 |
| Msa0515730 | Msa1340540 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa0519070 | Msa1340540 | 0.809555 | 1.785831e-50 | -8.615850e-47 |
| Msa0519090 | Msa1340540 | 0.809548 | 1.791827e-50 | -8.615850e-47 |
| Msa0523600 | Msa1340540 | 0.803679 | 3.106323e-49 | -8.615850e-47 |
| Msa0524470 | Msa1340540 | 0.818743 | 1.671734e-52 | -8.615850e-47 |
| Msa0548210 | Msa1340540 | 0.824089 | 9.750581e-54 | -8.615850e-47 |
| Msa0548260 | Msa1340540 | 0.802595 | 5.206624e-49 | -8.615850e-47 |
| Msa0550770 | Msa1340540 | 0.808458 | 3.066773e-50 | -8.615850e-47 |
| Msa0550800 | Msa1340540 | 0.810251 | 1.264581e-50 | -8.615850e-47 |
| Msa0552660 | Msa1340540 | 0.804169 | 2.457730e-49 | -8.615850e-47 |
| Msa0566090 | Msa1340540 | 0.815017 | 1.146380e-51 | -8.615850e-47 |
| Msa0575670 | Msa1340540 | 0.879741 | 9.725509e-70 | -8.615850e-47 |
| Msa0576480 | Msa1340540 | 0.809748 | 1.623419e-50 | -8.615850e-47 |
| Msa0576500 | Msa1340540 | 0.815622 | 8.413272e-52 | -8.615850e-47 |
| Msa0580360 | Msa1340540 | 0.858865 | 6.141260e-63 | -8.615850e-47 |
| Msa0598470 | Msa1340540 | 0.809310 | 2.015937e-50 | -8.615850e-47 |
| Msa0598980 | Msa1340540 | 0.813964 | 1.960138e-51 | -8.615850e-47 |
| Msa0602360 | Msa1340540 | 0.805194 | 1.501963e-49 | -8.615850e-47 |
| Msa0858250 | Msa1340540 | 0.800059 | 1.721319e-48 | -8.615850e-47 |
| Msa0868500 | Msa1340540 | 0.801352 | 9.375982e-49 | -8.615850e-47 |
| Msa0868510 | Msa1340540 | 0.802036 | 6.787340e-49 | -8.615850e-47 |
| Msa0868520 | Msa1340540 | 0.808717 | 2.699458e-50 | -8.615850e-47 |
| Msa0876270 | Msa1340540 | 0.859498 | 3.969264e-63 | -8.615850e-47 |
| Msa0901660 | Msa1340540 | 0.807658 | 4.538771e-50 | -8.615850e-47 |
| Msa0903570 | Msa1340540 | 0.812827 | 3.485051e-51 | -8.615850e-47 |
| Msa0928060 | Msa1340540 | 0.832354 | 9.918591e-56 | -8.615850e-47 |
| Msa0929940 | Msa1340540 | 0.828023 | 1.132025e-54 | -8.615850e-47 |
| Msa0941410 | Msa1340540 | 0.816706 | 4.815508e-52 | -8.615850e-47 |
| Msa0941420 | Msa1340540 | 0.814712 | 1.339518e-51 | -8.615850e-47 |
| Msa0967890 | Msa1340540 | 0.802502 | 5.442174e-49 | -8.615850e-47 |
| Msa0973010 | Msa1340540 | 0.801932 | 7.131539e-49 | -8.615850e-47 |
| Msa0973050 | Msa1340540 | 0.806773 | 6.990333e-50 | -8.615850e-47 |
| Msa0974410 | Msa1340540 | 0.805822 | 1.108583e-49 | -8.615850e-47 |
| Msa0978540 | Msa1340540 | 0.811981 | 5.334493e-51 | -8.615850e-47 |
| Msa0978550 | Msa1340540 | 0.801855 | 7.395444e-49 | -8.615850e-47 |
| Msa0978560 | Msa1340540 | 0.811865 | 5.653687e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340540 | MtrunA17_Chr7g0253961 | 98.708 | 542 | 7 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1090 |
| Msa1340540 | MtrunA17_Chr5g0436831 | 30.368 | 517 | 295 | 14 | 10 | 503 | 5 | 479 | 3.09e-53 | 188 |
| Msa1340540 | MtrunA17_Chr4g0003211 | 28.352 | 455 | 270 | 16 | 93 | 525 | 162 | 582 | 7.43e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340540 | AT5G35220.1 | 68.561 | 563 | 141 | 8 | 1 | 542 | 1 | 548 | 0.0 | 753 |
| Msa1340540 | AT5G35210.1 | 89.431 | 123 | 13 | 0 | 329 | 451 | 1543 | 1665 | 3.78e-63 | 224 |
| Msa1340540 | AT5G05740.2 | 28.037 | 535 | 339 | 12 | 2 | 525 | 13 | 512 | 5.36e-47 | 172 |
| Msa1340540 | AT5G05740.3 | 27.820 | 532 | 341 | 12 | 2 | 525 | 13 | 509 | 3.21e-46 | 170 |
| Msa1340540 | AT5G05740.1 | 32.383 | 386 | 229 | 8 | 141 | 525 | 187 | 541 | 1.63e-43 | 163 |
| Msa1340540 | AT1G17870.1 | 28.731 | 449 | 276 | 13 | 93 | 525 | 132 | 552 | 1.02e-30 | 126 |
Find 168 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGCTTCTGTTGGTTGTT+TGG | 0.167253 | tig0004180:+19891 | None:intergenic |
| TTCACTGCTCATTATAAATA+TGG | 0.190155 | tig0004180:+14755 | None:intergenic |
| CTACAACCTTTCTAAATAAA+TGG | 0.216107 | tig0004180:+14614 | None:intergenic |
| CTGTTGTTTCTTCTCACTAT+TGG | 0.217624 | tig0004180:-18025 | Msa1340540:CDS |
| TGGCCTCAACTAGCCGATTT+TGG | 0.220465 | tig0004180:+18197 | None:intergenic |
| GTCAAGAATTTCACTAGTTC+TGG | 0.220592 | tig0004180:+17789 | None:intergenic |
| TCTTGACTCTTCTTCCTGTT+TGG | 0.224026 | tig0004180:-14852 | Msa1340540:CDS |
| TGCCAAAGTGTTGTTTCTTC+TGG | 0.226330 | tig0004180:+18064 | None:intergenic |
| CTTGACTCTTCTTCCTGTTT+GGG | 0.253391 | tig0004180:-14851 | Msa1340540:CDS |
| TCAGCTTCTGTTGGTTGTTT+GGG | 0.253738 | tig0004180:+19892 | None:intergenic |
| GGATATAGCATCTCCATATC+TGG | 0.256518 | tig0004180:+17744 | None:intergenic |
| ATGTTCTTGCAGGGTGCTTT+TGG | 0.266459 | tig0004180:-15409 | Msa1340540:intron |
| TGGACCTCTTTCACTTGCTT+GGG | 0.275717 | tig0004180:-15069 | Msa1340540:CDS |
| TTTCAAGGTTCTTTGCTACT+TGG | 0.284871 | tig0004180:-16457 | Msa1340540:CDS |
| CAGTCATCTTTGTCCTCACT+TGG | 0.286074 | tig0004180:-18436 | Msa1340540:CDS |
| GTGGACCTCTTTCACTTGCT+TGG | 0.295844 | tig0004180:-15070 | Msa1340540:CDS |
| TCACTTGCGGGTCCCTTTGC+TGG | 0.297100 | tig0004180:-16574 | Msa1340540:CDS |
| CATATCACTCTTGGCAGCTT+TGG | 0.315889 | tig0004180:-16845 | Msa1340540:CDS |
| CAAAGCTGCCAAGAGTGATA+TGG | 0.318828 | tig0004180:+16846 | None:intergenic |
| GTGCTTCAACTTTGCCCATT+TGG | 0.319416 | tig0004180:+19632 | None:intergenic |
| CGTGTTCCATTTCCGTGTTA+TGG | 0.324339 | tig0004180:-19846 | Msa1340540:five_prime_UTR |
| GGATGAGCTTGCAGAGGAAC+TGG | 0.328392 | tig0004180:-14830 | Msa1340540:CDS |
| GTGACCAAAGAGGAGCCTTT+TGG | 0.334715 | tig0004180:-18289 | Msa1340540:CDS |
| AAAGGTGCACTAATGGTCTT+TGG | 0.336558 | tig0004180:-15385 | Msa1340540:CDS |
| ATTCACCCTCTTGTGATTGC+AGG | 0.348776 | tig0004180:-16124 | Msa1340540:CDS |
| AACCGGTTCACTGTTCCTTC+AGG | 0.362957 | tig0004180:-19695 | Msa1340540:CDS |
| TGCTGATGTAAAGAAAATTA+AGG | 0.367055 | tig0004180:-18341 | Msa1340540:CDS |
| TTCCCCAAAAGGCTCCTCTT+TGG | 0.372775 | tig0004180:+18285 | None:intergenic |
| AATTGAATTAACCTTTCCTT+TGG | 0.375547 | tig0004180:+14708 | None:intergenic |
| TCCAGATGTAGCTGGAGATT+TGG | 0.375838 | tig0004180:-16500 | Msa1340540:CDS |
| CTATACTGAAGCCCCAGATA+TGG | 0.376906 | tig0004180:-17757 | Msa1340540:CDS |
| CTTCCAGTGGGGTGCCTTGA+CGG | 0.386309 | tig0004180:-15939 | Msa1340540:CDS |
| TCTACTTGAGTACTTCTATC+AGG | 0.390353 | tig0004180:+16601 | None:intergenic |
| GCAATCACAAGAGGGTGAAT+TGG | 0.402120 | tig0004180:+16127 | None:intergenic |
| AACCGGAACTCTGAGTTTAG+AGG | 0.402939 | tig0004180:+19720 | None:intergenic |
| CCTCTAGCATATGGTGTCTT+GGG | 0.404064 | tig0004180:-17702 | Msa1340540:CDS |
| CACTTATACATTGCTAGGGC+TGG | 0.407316 | tig0004180:-15356 | Msa1340540:CDS |
| AGTTGATTCTTTCAAACTCA+TGG | 0.408022 | tig0004180:-18392 | Msa1340540:CDS |
| TCAATTCACATGTATCCAAA+TGG | 0.408058 | tig0004180:-19647 | Msa1340540:CDS |
| TTGACCACTTATACATTGCT+AGG | 0.408680 | tig0004180:-15361 | Msa1340540:CDS |
| AAGCATGTTAAAAGCTTGTA+TGG | 0.409658 | tig0004180:+15959 | None:intergenic |
| CGTGGCCCACCCCGTGGATC+AGG | 0.411187 | tig0004180:+18124 | None:intergenic |
| GTTGATGATGAAGGGGAAAA+TGG | 0.411321 | tig0004180:-19561 | Msa1340540:CDS |
| TTCATTCCCCATATCACTCT+TGG | 0.411866 | tig0004180:-16854 | Msa1340540:CDS |
| ACCTCTAGCATATGGTGTCT+TGG | 0.412129 | tig0004180:-17703 | Msa1340540:CDS |
| CAGGTTCCTCTACCATAAAA+AGG | 0.413689 | tig0004180:+18158 | None:intergenic |
| GGTGGGCCACGTGTTAGCTT+TGG | 0.415291 | tig0004180:-18112 | Msa1340540:CDS |
| TATGGGCCATTTATTTAGAA+AGG | 0.416868 | tig0004180:-14620 | Msa1340540:three_prime_UTR |
| TGGGGTGCCTTGACGGTGGC+AGG | 0.417438 | tig0004180:-15932 | Msa1340540:CDS |
| TCAAGAATTTCACTAGTTCT+GGG | 0.419903 | tig0004180:+17790 | None:intergenic |
| GTTCCTAGCATGTTGTTTCA+AGG | 0.423181 | tig0004180:-16472 | Msa1340540:CDS |
| GGATCAGGACTGTCTGAATC+AGG | 0.423642 | tig0004180:+18139 | None:intergenic |
| CAGCTTTGGTGCTATTACTC+AGG | 0.424343 | tig0004180:-16831 | Msa1340540:intron |
| AGCAGTGAAATGAAATATAT+AGG | 0.433869 | tig0004180:-14741 | Msa1340540:three_prime_UTR |
| AACCCCTTCCACTTCTCAAC+GGG | 0.438474 | tig0004180:-19460 | Msa1340540:intron |
| AACAGTGAACCGGTTTGAAC+CGG | 0.439164 | tig0004180:+19703 | None:intergenic |
| TCATTTAAGCATGGTTTCTC+CGG | 0.439754 | tig0004180:+14934 | None:intergenic |
| CAAGTAGACATATCACTTGC+GGG | 0.440482 | tig0004180:-16586 | Msa1340540:CDS |
| AAAGCTGCCAAGAGTGATAT+GGG | 0.447341 | tig0004180:+16847 | None:intergenic |
| TTCCTGAAGGAACAGTGAAC+CGG | 0.447813 | tig0004180:+19693 | None:intergenic |
| TCTGGGGCTTCAGTATAGTT+AGG | 0.447919 | tig0004180:+17762 | None:intergenic |
| CTCCTCTTTGGTCACCCAAA+AGG | 0.448155 | tig0004180:+18297 | None:intergenic |
| TCCCTCTAAACTCAGAGTTC+CGG | 0.449415 | tig0004180:-19722 | Msa1340540:CDS |
| TTGACACCATAACACGGAAA+TGG | 0.451753 | tig0004180:+19840 | None:intergenic |
| TTCAAACTCATGGAACTCCT+TGG | 0.452837 | tig0004180:-18382 | Msa1340540:CDS |
| CTCAGAGTTCCGGTTCAAAC+CGG | 0.459234 | tig0004180:-19712 | Msa1340540:CDS |
| TCTGCAAGCTCATCCCAAAC+AGG | 0.459412 | tig0004180:+14838 | None:intergenic |
| ACATGGAGACAGACATTTGT+GGG | 0.464417 | tig0004180:-14895 | Msa1340540:CDS |
| TTAAAGCCTCTATCTTCATC+AGG | 0.470504 | tig0004180:+19498 | None:intergenic |
| CAATTCACATGTATCCAAAT+GGG | 0.473183 | tig0004180:-19646 | Msa1340540:CDS |
| GATATAGCATCTCCATATCT+GGG | 0.477330 | tig0004180:+17745 | None:intergenic |
| ACCAAATCTCCAGCTACATC+TGG | 0.477559 | tig0004180:+16499 | None:intergenic |
| TCAGCAGGATCAACCTTCTC+AGG | 0.479830 | tig0004180:+18358 | None:intergenic |
| TGACGGTGGCAGGTCTGTGC+AGG | 0.486800 | tig0004180:-15922 | Msa1340540:intron |
| GACGTTGCGGTTCAGAGGGA+TGG | 0.488357 | tig0004180:+19815 | None:intergenic |
| TAGCTTTGGTTTGCTGCGTA+AGG | 0.490822 | tig0004180:-18098 | Msa1340540:CDS |
| GGAGGTAGGAATTGCATCTC+AGG | 0.495996 | tig0004180:-17993 | Msa1340540:intron |
| CCTTCTCCCAGTTCCCCAAA+AGG | 0.498326 | tig0004180:+18274 | None:intergenic |
| AAGTGTTGTTTCTTCTGGCT+CGG | 0.498944 | tig0004180:+18069 | None:intergenic |
| ACACTCTTCTCAGCTTCTGT+TGG | 0.499259 | tig0004180:+19883 | None:intergenic |
| TTCAGACAGTCCTGATCCAC+GGG | 0.502482 | tig0004180:-18134 | Msa1340540:CDS |
| TCTTCTCACTATTGGTACCT+CGG | 0.503620 | tig0004180:-18017 | Msa1340540:CDS |
| GGACCTCTTTCACTTGCTTG+GGG | 0.505016 | tig0004180:-15068 | Msa1340540:CDS |
| GGTAACGCTGACTCAACAAA+TGG | 0.509174 | tig0004180:+17723 | None:intergenic |
| CAGCCCTAGCAATGTATAAG+TGG | 0.509270 | tig0004180:+15357 | None:intergenic |
| AATCCCCAAGCAAGTGAAAG+AGG | 0.516614 | tig0004180:+15065 | None:intergenic |
| TTAATCAGTAGAGCAACTCT+TGG | 0.517207 | tig0004180:-16433 | Msa1340540:CDS |
| CCACCGTCAAGGCACCCCAC+TGG | 0.518725 | tig0004180:+15936 | None:intergenic |
| TATGGCTATGTGCAGGAGGT+TGG | 0.519283 | tig0004180:-16926 | Msa1340540:intron |
| TCAGCGTTACCTCTAGCATA+TGG | 0.519937 | tig0004180:-17711 | Msa1340540:CDS |
| CTTTGGTTTGCTGCGTAAGG+AGG | 0.537726 | tig0004180:-18095 | Msa1340540:CDS |
| ACGTTGCGGTTCAGAGGGAT+GGG | 0.539275 | tig0004180:+19816 | None:intergenic |
| TCATCAAATCCAGATGTAGC+TGG | 0.539401 | tig0004180:-16508 | Msa1340540:CDS |
| TTAAATGACGTGACAGAAGT+TGG | 0.539625 | tig0004180:-14919 | Msa1340540:CDS |
| GTGATATGGGGAATGAAGAA+AGG | 0.540541 | tig0004180:+16860 | None:intergenic |
| AAAATGTACCCGTTGAGAAG+TGG | 0.541828 | tig0004180:+19452 | None:intergenic |
| CATAATGTTCGTGTTAACAA+TGG | 0.544081 | tig0004180:+14662 | None:intergenic |
| AACATGGAGACAGACATTTG+TGG | 0.544900 | tig0004180:-14896 | Msa1340540:CDS |
| CACTATTGGTACCTCGGTGG+AGG | 0.545144 | tig0004180:-18011 | Msa1340540:CDS |
| GGAACTCCTTGGACCTGAGA+AGG | 0.547475 | tig0004180:-18371 | Msa1340540:CDS |
| GTGTTACCTGATGAAGATAG+AGG | 0.550223 | tig0004180:-19504 | Msa1340540:CDS |
| GGAGAAATGAAGAAGATGAA+AGG | 0.550917 | tig0004180:+19784 | None:intergenic |
| AAACGACGTTGCGGTTCAGA+GGG | 0.551794 | tig0004180:+19811 | None:intergenic |
| AAAACGACGTTGCGGTTCAG+AGG | 0.552456 | tig0004180:+19810 | None:intergenic |
| ACGACAAAACCAAAACCAAA+CGG | 0.553988 | tig0004180:+19932 | None:intergenic |
| AAAGACGGTGTTGATGATGA+AGG | 0.557430 | tig0004180:-19570 | Msa1340540:CDS |
| CTGGATTTGATGAAAGAAGA+AGG | 0.558511 | tig0004180:+16518 | None:intergenic |
| GAACCTTGAAACAACATGCT+AGG | 0.560365 | tig0004180:+16469 | None:intergenic |
| GACAGTCCTGATCCACGGGG+TGG | 0.562814 | tig0004180:-18130 | Msa1340540:CDS |
| TGATAGCACAGCACCAGCAA+AGG | 0.565009 | tig0004180:+16561 | None:intergenic |
| AGGTAACACTGTGGTTACAT+TGG | 0.565740 | tig0004180:+19518 | None:intergenic |
| TGGATACATGTGAATTGAAA+CGG | 0.566171 | tig0004180:+19652 | None:intergenic |
| GATAGCACAGCACCAGCAAA+GGG | 0.567307 | tig0004180:+16562 | None:intergenic |
| CTTGCAGAGGAACTGGGCAT+AGG | 0.570390 | tig0004180:-14823 | Msa1340540:CDS |
| AATTGAAACGGTGGTTGTAG+TGG | 0.573177 | tig0004180:+19664 | None:intergenic |
| TGACCACTTATACATTGCTA+GGG | 0.574206 | tig0004180:-15360 | Msa1340540:CDS |
| AAGAATTTCACTAGTTCTGG+GGG | 0.574258 | tig0004180:+17792 | None:intergenic |
| ACAGTCCTGATCCACGGGGT+GGG | 0.575752 | tig0004180:-18129 | Msa1340540:CDS |
| ACTTATACATTGCTAGGGCT+GGG | 0.577424 | tig0004180:-15355 | Msa1340540:CDS |
| TGAAGCACGTTGATTTCGAT+AGG | 0.579208 | tig0004180:-19617 | Msa1340540:CDS |
| AGCCAGAAGAAACAACACTT+TGG | 0.580731 | tig0004180:-18066 | Msa1340540:CDS |
| ACCGGAACTCTGAGTTTAGA+GGG | 0.580910 | tig0004180:+19721 | None:intergenic |
| GAAAATCATTACCAAAGGAA+AGG | 0.581591 | tig0004180:-14719 | Msa1340540:three_prime_UTR |
| TCTGTCACGTCATTTAAGCA+TGG | 0.582580 | tig0004180:+14925 | None:intergenic |
| AATCGGCTAGTTGAGGCCAC+TGG | 0.588411 | tig0004180:-18193 | Msa1340540:CDS |
| AAGACGGTGTTGATGATGAA+GGG | 0.591311 | tig0004180:-19569 | Msa1340540:CDS |
| TACATTGCTAGGGCTGGGAG+TGG | 0.592680 | tig0004180:-15350 | Msa1340540:intron |
| CAACCCCTTCCACTTCTCAA+CGG | 0.594204 | tig0004180:-19461 | Msa1340540:CDS |
| ATTCAGACAGTCCTGATCCA+CGG | 0.596032 | tig0004180:-18135 | Msa1340540:CDS |
| ACGTGACAGAAGTTGGAACA+TGG | 0.597819 | tig0004180:-14912 | Msa1340540:CDS |
| CTTGAGTACTTCTATCAGGA+AGG | 0.598458 | tig0004180:+16605 | None:intergenic |
| CAAGAATTTCACTAGTTCTG+GGG | 0.603253 | tig0004180:+17791 | None:intergenic |
| GATGAGCTTGCAGAGGAACT+GGG | 0.604398 | tig0004180:-14829 | Msa1340540:CDS |
| TCAAGTAGACATATCACTTG+CGG | 0.605844 | tig0004180:-16587 | Msa1340540:CDS |
| ACCCTCTTGTGATTGCAGGA+TGG | 0.607627 | tig0004180:-16120 | Msa1340540:intron |
| ATTGGTACCTCGGTGGAGGT+AGG | 0.607753 | tig0004180:-18007 | Msa1340540:CDS |
| TATAGGAAAATCATTACCAA+AGG | 0.607998 | tig0004180:-14724 | Msa1340540:three_prime_UTR |
| AAATTTAAGGGGAAAGAGAG+AGG | 0.608483 | tig0004180:-18236 | Msa1340540:CDS |
| TACCCGTTGAGAAGTGGAAG+GGG | 0.609753 | tig0004180:+19458 | None:intergenic |
| GCACAGACCTGCCACCGTCA+AGG | 0.611900 | tig0004180:+15925 | None:intergenic |
| GATCAACCTTCTCAGGTCCA+AGG | 0.613468 | tig0004180:+18365 | None:intergenic |
| ACTCCAAAATCGGCTAGTTG+AGG | 0.625387 | tig0004180:-18200 | Msa1340540:CDS |
| TACCATCCTGCAATCACAAG+AGG | 0.630281 | tig0004180:+16118 | None:intergenic |
| TGTTTGGGATGAGCTTGCAG+AGG | 0.630439 | tig0004180:-14836 | Msa1340540:CDS |
| CCAGTGGGGTGCCTTGACGG+TGG | 0.634620 | tig0004180:-15936 | Msa1340540:CDS |
| CATGGAGACAGACATTTGTG+GGG | 0.635920 | tig0004180:-14894 | Msa1340540:CDS |
| GTACCCGTTGAGAAGTGGAA+GGG | 0.641962 | tig0004180:+19457 | None:intergenic |
| AGACGGTGTTGATGATGAAG+GGG | 0.643248 | tig0004180:-19568 | Msa1340540:CDS |
| TAACCATTAAAACTAAAATG+TGG | 0.650160 | tig0004180:+14792 | None:intergenic |
| ACCATCCTGCAATCACAAGA+GGG | 0.650517 | tig0004180:+16119 | None:intergenic |
| TGTACCCGTTGAGAAGTGGA+AGG | 0.653433 | tig0004180:+19456 | None:intergenic |
| CTGAGAAGAGTGTGTCTGTG+TGG | 0.656645 | tig0004180:-19873 | Msa1340540:five_prime_UTR |
| CCCAAGACACCATATGCTAG+AGG | 0.665791 | tig0004180:+17702 | None:intergenic |
| TCTCACTATTGGTACCTCGG+TGG | 0.666071 | tig0004180:-18014 | Msa1340540:CDS |
| AAGGTTGTACTTATCGCCAG+TGG | 0.671916 | tig0004180:+18177 | None:intergenic |
| CTAACACGTGGCCCACCCCG+TGG | 0.676500 | tig0004180:+18118 | None:intergenic |
| ATGGAGACAGACATTTGTGG+GGG | 0.683523 | tig0004180:-14893 | Msa1340540:CDS |
| AGCAAACCAAAGCTAACACG+TGG | 0.684408 | tig0004180:+18106 | None:intergenic |
| ATGGGTTTGACACCATAACA+CGG | 0.686241 | tig0004180:+19834 | None:intergenic |
| ATATAGCATCTCCATATCTG+GGG | 0.687528 | tig0004180:+17746 | None:intergenic |
| AAGCTGCCAAGAGTGATATG+GGG | 0.707461 | tig0004180:+16848 | None:intergenic |
| AAAGGAATAAAACGACGTTG+CGG | 0.718101 | tig0004180:+19802 | None:intergenic |
| GTTGTACACAGATCCAAGTG+AGG | 0.722197 | tig0004180:+18423 | None:intergenic |
| AGAATTTCACTAGTTCTGGG+GGG | 0.730909 | tig0004180:+17793 | None:intergenic |
| TGCAATTCCTACCTCCACCG+AGG | 0.747737 | tig0004180:+18000 | None:intergenic |
| ATCTTCATCAGGTAACACTG+TGG | 0.768757 | tig0004180:+19509 | None:intergenic |
| ATACATGTGAATTGAAACGG+TGG | 0.789877 | tig0004180:+19655 | None:intergenic |
| TCAGACAGTCCTGATCCACG+GGG | 0.828272 | tig0004180:-18133 | Msa1340540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAATCTATTTAATATTT+AGG | + | tig0004180:15691-15710 | None:intergenic | 10.0% |
| !! | ATTATTCATTATTCAATATT+AGG | - | tig0004180:18514-18533 | Msa1340540:intron | 10.0% |
| !!! | ACAATTTTATTTTTATTTAC+AGG | - | tig0004180:18540-18559 | Msa1340540:intron | 10.0% |
| !! | TATTAAATAGATTCAATACT+TGG | - | tig0004180:15694-15713 | Msa1340540:intron | 15.0% |
| !! | AACAATAAAATATTTAGACA+CGG | + | tig0004180:16687-16706 | None:intergenic | 15.0% |
| !!! | TTTTTGAAATTACATAAGTT+AGG | + | tig0004180:17224-17243 | None:intergenic | 15.0% |
| !! | TAATTTCATATGTATAAAAG+TGG | + | tig0004180:17375-17394 | None:intergenic | 15.0% |
| !!! | CGACTTTATTTTATTAATTT+AGG | - | tig0004180:18187-18206 | Msa1340540:CDS | 15.0% |
| !!! | AGATATATATAGCTTTTTAT+TGG | - | tig0004180:18848-18867 | Msa1340540:intron | 15.0% |
| !!! | TTTTCAATCAATAACAAAGA+CGG | - | tig0004180:14947-14966 | Msa1340540:intron | 20.0% |
| !!! | AATGTTGATTCTTTGATATA+TGG | - | tig0004180:15183-15202 | Msa1340540:intron | 20.0% |
| !!! | TCATTCTATTTTGGTTTTTA+TGG | - | tig0004180:15891-15910 | Msa1340540:intron | 20.0% |
| !!! | TTTTGTTAACTAACCTTTAA+TGG | - | tig0004180:15923-15942 | Msa1340540:CDS | 20.0% |
| !!! | AAAATTAAGGATAAGCTTTT+TGG | - | tig0004180:16204-16223 | Msa1340540:intron | 20.0% |
| !!! | AAATTAGATTTTACGCTAAA+AGG | - | tig0004180:17389-17408 | Msa1340540:intron | 20.0% |
| !! | TACATTATATTTATACCTGA+TGG | - | tig0004180:17582-17601 | Msa1340540:intron | 20.0% |
| !!! | ATGCTTAATTTTACTTGTTT+GGG | + | tig0004180:17651-17670 | None:intergenic | 20.0% |
| !!! | AATGCTTAATTTTACTTGTT+TGG | + | tig0004180:17652-17671 | None:intergenic | 20.0% |
| !! | TACTAAAATACATAAACAGA+CGG | + | tig0004180:17858-17877 | None:intergenic | 20.0% |
| !!! | AAATTATATTCTAGAAAGGA+AGG | + | tig0004180:18142-18161 | None:intergenic | 20.0% |
| !!! | GGTAAAATTATATTCTAGAA+AGG | + | tig0004180:18146-18165 | None:intergenic | 20.0% |
| !! | AAAGTACATTATGTTTAAGA+AGG | + | tig0004180:18450-18469 | None:intergenic | 20.0% |
| !!! | TTTATTTTTATTTACAGGTG+TGG | - | tig0004180:18545-18564 | Msa1340540:intron | 20.0% |
| !!! | TTATTTTTATTTACAGGTGT+GGG | - | tig0004180:18546-18565 | Msa1340540:intron | 20.0% |
| !!! | TAATTTTGACTGTATGAAAT+GGG | - | tig0004180:18824-18843 | Msa1340540:intron | 20.0% |
| !! | GCATTTAGTATTTACTAATA+TGG | - | tig0004180:18943-18962 | Msa1340540:intron | 20.0% |
| !! | CATGTAATGAAACAAAAATT+AGG | + | tig0004180:19106-19125 | None:intergenic | 20.0% |
| !!! | TAACCACATTTTAGTTTTAA+TGG | - | tig0004180:19737-19756 | Msa1340540:CDS | 20.0% |
| !! | TAACCATTAAAACTAAAATG+TGG | + | tig0004180:19743-19762 | None:intergenic | 20.0% |
| !! | TGTAAAGAAAAAGAATACTA+TGG | - | tig0004180:19894-19913 | Msa1340540:five_prime_UTR | 20.0% |
| !! | GTAAAGAAAAAGAATACTAT+GGG | - | tig0004180:19895-19914 | Msa1340540:five_prime_UTR | 20.0% |
| ! | ATTTCTCCATTGAAGAAAAA+TGG | - | tig0004180:14763-14782 | Msa1340540:three_prime_UTR | 25.0% |
| ! | TTTCTCCATTGAAGAAAAAT+GGG | - | tig0004180:14764-14783 | Msa1340540:three_prime_UTR | 25.0% |
| !! | TGTTGTCTATCATTCTATTT+TGG | - | tig0004180:15882-15901 | Msa1340540:intron | 25.0% |
| !! | TTAATTTTCTTTACATCAGC+AGG | + | tig0004180:16192-16211 | None:intergenic | 25.0% |
| ! | TGCTGATGTAAAGAAAATTA+AGG | - | tig0004180:16191-16210 | Msa1340540:intron | 25.0% |
| !!! | TTTTTGGTTATTCAACCTTT+TGG | - | tig0004180:16220-16239 | Msa1340540:intron | 25.0% |
| !!! | TTTTGGTTATTCAACCTTTT+GGG | - | tig0004180:16221-16240 | Msa1340540:intron | 25.0% |
| !! | TTCTTTTCATCGGAAATTTA+AGG | - | tig0004180:16283-16302 | Msa1340540:intron | 25.0% |
| !! | TCTTTTCATCGGAAATTTAA+GGG | - | tig0004180:16284-16303 | Msa1340540:intron | 25.0% |
| !!! | TTTTTTCCATACTCCAAAAT+CGG | - | tig0004180:16322-16341 | Msa1340540:intron | 25.0% |
| ! | ATCAATACTATTTGAACATC+AGG | - | tig0004180:16572-16591 | Msa1340540:CDS | 25.0% |
| !!! | AAACTTAACTGTTTTAAGCT+GGG | + | tig0004180:17074-17093 | None:intergenic | 25.0% |
| ! | TAAGTTAGGTAAAAGAGATA+AGG | + | tig0004180:17210-17229 | None:intergenic | 25.0% |
| ! | TGAGACATTGTATAATAGTA+TGG | + | tig0004180:17249-17268 | None:intergenic | 25.0% |
| ! | CTATTATACAATGTCTCATT+AGG | - | tig0004180:17251-17270 | Msa1340540:intron | 25.0% |
| ! | GAAAACTACACAAATAAGAT+AGG | + | tig0004180:17497-17516 | None:intergenic | 25.0% |
| !! | ATATTTATACCTGATGGATA+TGG | - | tig0004180:17588-17607 | Msa1340540:intron | 25.0% |
| !!! | GTATTTTAGTATGCATCTAA+AGG | - | tig0004180:17867-17886 | Msa1340540:intron | 25.0% |
| ! | ATTTAGGTAAAATACTCTAG+TGG | - | tig0004180:18203-18222 | Msa1340540:CDS | 25.0% |
| !! | AGTATGCATACTTTATGTTT+TGG | - | tig0004180:18322-18341 | Msa1340540:CDS | 25.0% |
| ! | ATATTTACTTGTCATACAGA+AGG | - | tig0004180:18659-18678 | Msa1340540:intron | 25.0% |
| ! | GATTGTCCTATTTCAAATTT+CGG | - | tig0004180:18701-18720 | Msa1340540:intron | 25.0% |
| ! | CCAATTTAATAGTAACCAAT+TGG | + | tig0004180:18728-18747 | None:intergenic | 25.0% |
| ! | CCAATTGGTTACTATTAAAT+TGG | - | tig0004180:18725-18744 | Msa1340540:intron | 25.0% |
| !!! | CTAATTTTGACTGTATGAAA+TGG | - | tig0004180:18823-18842 | Msa1340540:intron | 25.0% |
| !! | TGCTTTGAATTTCACAATTA+AGG | + | tig0004180:18898-18917 | None:intergenic | 25.0% |
| ! | GATAAGTAGAAACAATTGAT+CGG | - | tig0004180:18987-19006 | Msa1340540:intron | 25.0% |
| ! | CATGAATGAGAATATTTATG+TGG | + | tig0004180:19028-19047 | None:intergenic | 25.0% |
| ! | AAATATTCTCATTCATGAGT+TGG | - | tig0004180:19031-19050 | Msa1340540:intron | 25.0% |
| !!! | ATTTTTTGTCATATTTTCGC+AGG | - | tig0004180:19487-19506 | Msa1340540:CDS | 25.0% |
| ! | TTCACTGCTCATTATAAATA+TGG | + | tig0004180:19780-19799 | None:intergenic | 25.0% |
| ! | AGCAGTGAAATGAAATATAT+AGG | - | tig0004180:19791-19810 | Msa1340540:five_prime_UTR | 25.0% |
| ! | TATAGGAAAATCATTACCAA+AGG | - | tig0004180:19808-19827 | Msa1340540:five_prime_UTR | 25.0% |
| ! | AATTGAATTAACCTTTCCTT+TGG | + | tig0004180:19827-19846 | None:intergenic | 25.0% |
| ! | CTACAACCTTTCTAAATAAA+TGG | + | tig0004180:19921-19940 | None:intergenic | 25.0% |
| !! | AAGTTCCCATTTTTCTTCAA+TGG | + | tig0004180:14772-14791 | None:intergenic | 30.0% |
| TGGATACATGTGAATTGAAA+CGG | + | tig0004180:14883-14902 | None:intergenic | 30.0% | |
| TCAATTCACATGTATCCAAA+TGG | - | tig0004180:14885-14904 | Msa1340540:CDS | 30.0% | |
| CAATTCACATGTATCCAAAT+GGG | - | tig0004180:14886-14905 | Msa1340540:CDS | 30.0% | |
| CTTTGATATATGGCTCTTAT+TGG | - | tig0004180:15193-15212 | Msa1340540:intron | 30.0% | |
| TAAGCTTTCTATGACTGTTT+GGG | + | tig0004180:15397-15416 | None:intergenic | 30.0% | |
| ATAAGCTTTCTATGACTGTT+TGG | + | tig0004180:15398-15417 | None:intergenic | 30.0% | |
| TATAGTATACACGTTTGGAT+TGG | + | tig0004180:15446-15465 | None:intergenic | 30.0% | |
| CTAACTATAGTATACACGTT+TGG | + | tig0004180:15451-15470 | None:intergenic | 30.0% | |
| ! | GTTTGTGAAATTTTGTACTG+CGG | + | tig0004180:15572-15591 | None:intergenic | 30.0% |
| ! | CAAAACACTTGCATAGTTTT+TGG | + | tig0004180:15798-15817 | None:intergenic | 30.0% |
| !!! | GGGTTTTTTTTTAACACATG+AGG | + | tig0004180:15992-16011 | None:intergenic | 30.0% |
| ! | AGTTGATTCTTTCAAACTCA+TGG | - | tig0004180:16140-16159 | Msa1340540:CDS | 30.0% |
| ! | CTTTTCATCGGAAATTTAAG+GGG | - | tig0004180:16285-16304 | Msa1340540:intron | 30.0% |
| ! | CGATAAGTACAACCTTTTTA+TGG | - | tig0004180:16362-16381 | Msa1340540:intron | 30.0% |
| GATCTGATGAATCAAAAACA+TGG | + | tig0004180:16711-16730 | None:intergenic | 30.0% | |
| ! | TCAAGAATTTCACTAGTTCT+GGG | + | tig0004180:16745-16764 | None:intergenic | 30.0% |
| TTTCCTGTATCACAAAAAAC+TGG | - | tig0004180:16945-16964 | Msa1340540:intron | 30.0% | |
| !!! | AATCCAGTTTTTTGTGATAC+AGG | + | tig0004180:16951-16970 | None:intergenic | 30.0% |
| ! | TTTTAAGCTGGGTAAAAAGT+AGG | + | tig0004180:17063-17082 | None:intergenic | 30.0% |
| !! | CAAACTTAACTGTTTTAAGC+TGG | + | tig0004180:17075-17094 | None:intergenic | 30.0% |
| CAACATAGTGACATGAATAT+CGG | + | tig0004180:17287-17306 | None:intergenic | 30.0% | |
| ! | TATGTTGATTGACTCACTAT+TGG | - | tig0004180:17300-17319 | Msa1340540:intron | 30.0% |
| GTCAAAAGTTTCAGTTAGTT+TGG | - | tig0004180:17338-17357 | Msa1340540:intron | 30.0% | |
| !!! | CAGTTTTTTACACAATTCCA+TGG | - | tig0004180:17521-17540 | Msa1340540:intron | 30.0% |
| GAAGCAAAAAGAAAAGTTGA+TGG | + | tig0004180:17549-17568 | None:intergenic | 30.0% | |
| ! | ATATTCTAGAAAGGAAGGAA+GGG | + | tig0004180:18137-18156 | None:intergenic | 30.0% |
| ! | TATATTCTAGAAAGGAAGGA+AGG | + | tig0004180:18138-18157 | None:intergenic | 30.0% |
| ! | ATTGGTCCGAAATTTGAAAT+AGG | + | tig0004180:18710-18729 | None:intergenic | 30.0% |
| ATTTCAAATTTCGGACCAAT+TGG | - | tig0004180:18710-18729 | Msa1340540:intron | 30.0% | |
| TTTCATTACATGTTCTTGCA+GGG | - | tig0004180:19114-19133 | Msa1340540:intron | 30.0% | |
| GGTAAGTCTAATATTTGCTT+AGG | - | tig0004180:19203-19222 | Msa1340540:intron | 30.0% | |
| AGTTTAACCATAGCATGAAT+TGG | - | tig0004180:19272-19291 | Msa1340540:intron | 30.0% | |
| ! | TGTAACTATTACCAGTCTTT+TGG | - | tig0004180:19330-19349 | Msa1340540:intron | 30.0% |
| CTGAAAAATAACCAAAAGAC+TGG | + | tig0004180:19344-19363 | None:intergenic | 30.0% | |
| AAGCTGTTGAAAAGAGAAAA+GGG | + | tig0004180:19441-19460 | None:intergenic | 30.0% | |
| GAAAATCATTACCAAAGGAA+AGG | - | tig0004180:19813-19832 | Msa1340540:five_prime_UTR | 30.0% | |
| !!! | AACAATGGTTTTATCACAAG+CGG | + | tig0004180:19858-19877 | None:intergenic | 30.0% |
| CATAATGTTCGTGTTAACAA+TGG | + | tig0004180:19873-19892 | None:intergenic | 30.0% | |
| TATGGGCCATTTATTTAGAA+AGG | - | tig0004180:19912-19931 | Msa1340540:five_prime_UTR | 30.0% | |
| ACGACAAAACCAAAACCAAA+CGG | + | tig0004180:14603-14622 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGTTTTGTCGTATT+TGG | - | tig0004180:14606-14625 | Msa1340540:three_prime_UTR | 35.0% |
| AAAGGAATAAAACGACGTTG+CGG | + | tig0004180:14733-14752 | None:intergenic | 35.0% | |
| GGAGAAATGAAGAAGATGAA+AGG | + | tig0004180:14751-14770 | None:intergenic | 35.0% | |
| ATACATGTGAATTGAAACGG+TGG | + | tig0004180:14880-14899 | None:intergenic | 35.0% | |
| TTAAAGCCTCTATCTTCATC+AGG | + | tig0004180:15037-15056 | None:intergenic | 35.0% | |
| ! | TCTTGTGTTCTTTTCTTGCT+TGG | - | tig0004180:15120-15139 | Msa1340540:intron | 35.0% |
| CTATAGTTAGAAACTGCTAC+AGG | - | tig0004180:15461-15480 | Msa1340540:intron | 35.0% | |
| TTAGTCTACCTAGTGTTTAG+TGG | - | tig0004180:15509-15528 | Msa1340540:intron | 35.0% | |
| CATAGCAATTGTAGTGTAGT+GGG | - | tig0004180:15609-15628 | Msa1340540:intron | 35.0% | |
| AGAGAGAAATCCTCTTTGTT+TGG | - | tig0004180:15655-15674 | Msa1340540:intron | 35.0% | |
| CCAAATATCACCAAACAAAG+AGG | + | tig0004180:15668-15687 | None:intergenic | 35.0% | |
| ! | CCTCTTTGTTTGGTGATATT+TGG | - | tig0004180:15665-15684 | Msa1340540:intron | 35.0% |
| !!! | AGTTTTTGGTTGGGAACAAA+TGG | + | tig0004180:15784-15803 | None:intergenic | 35.0% |
| !!! | CACTTGCATAGTTTTTGGTT+GGG | + | tig0004180:15793-15812 | None:intergenic | 35.0% |
| !!! | ACACTTGCATAGTTTTTGGT+TGG | + | tig0004180:15794-15813 | None:intergenic | 35.0% |
| CAACAGAAACATTGATCTGT+GGG | + | tig0004180:16012-16031 | None:intergenic | 35.0% | |
| AAATTTAAGGGGAAAGAGAG+AGG | - | tig0004180:16296-16315 | Msa1340540:intron | 35.0% | |
| ! | GTACAACCTTTTTATGGTAG+AGG | - | tig0004180:16368-16387 | Msa1340540:intron | 35.0% |
| !! | CTGTTGTTTCTTCTCACTAT+TGG | - | tig0004180:16507-16526 | Msa1340540:CDS | 35.0% |
| !! | AAGAATTTCACTAGTTCTGG+GGG | + | tig0004180:16743-16762 | None:intergenic | 35.0% |
| !! | CAAGAATTTCACTAGTTCTG+GGG | + | tig0004180:16744-16763 | None:intergenic | 35.0% |
| GTCAAGAATTTCACTAGTTC+TGG | + | tig0004180:16746-16765 | None:intergenic | 35.0% | |
| ATATAGCATCTCCATATCTG+GGG | + | tig0004180:16789-16808 | None:intergenic | 35.0% | |
| GATATAGCATCTCCATATCT+GGG | + | tig0004180:16790-16809 | None:intergenic | 35.0% | |
| CAAACGCACACAAAAAAGAA+CGG | + | tig0004180:16889-16908 | None:intergenic | 35.0% | |
| CAAAACATAGTCTATGACTC+CGG | - | tig0004180:16978-16997 | Msa1340540:intron | 35.0% | |
| GTGCAGTAAAATCTAAACAC+CGG | + | tig0004180:17000-17019 | None:intergenic | 35.0% | |
| AGGTAAAAGAGATAAGGAAG+AGG | + | tig0004180:17204-17223 | None:intergenic | 35.0% | |
| !! | AAGAAAAGTTGATGGAACCA+TGG | + | tig0004180:17541-17560 | None:intergenic | 35.0% |
| TTACTGCTGATGGTTCAATT+TGG | + | tig0004180:17828-17847 | None:intergenic | 35.0% | |
| TCTACTTGAGTACTTCTATC+AGG | + | tig0004180:17934-17953 | None:intergenic | 35.0% | |
| TCAAGTAGACATATCACTTG+CGG | - | tig0004180:17945-17964 | Msa1340540:intron | 35.0% | |
| !!! | TCATTTTCGATGTTTGCTGT+TGG | - | tig0004180:17991-18010 | Msa1340540:intron | 35.0% |
| CTGGATTTGATGAAAGAAGA+AGG | + | tig0004180:18017-18036 | None:intergenic | 35.0% | |
| TTTCAAGGTTCTTTGCTACT+TGG | - | tig0004180:18075-18094 | Msa1340540:CDS | 35.0% | |
| TTAATCAGTAGAGCAACTCT+TGG | - | tig0004180:18099-18118 | Msa1340540:CDS | 35.0% | |
| !! | CAAGCACTGGATCTATATTT+AGG | + | tig0004180:18167-18186 | None:intergenic | 35.0% |
| TAAAATAAAGTCGCAAGCAC+TGG | + | tig0004180:18180-18199 | None:intergenic | 35.0% | |
| TGCAATCATGTCATATCACT+TGG | + | tig0004180:18267-18286 | None:intergenic | 35.0% | |
| ! | ATGATTGCAGCACATCATTT+TGG | - | tig0004180:18278-18297 | Msa1340540:CDS | 35.0% |
| ! | TGATTGCAGCACATCATTTT+GGG | - | tig0004180:18279-18298 | Msa1340540:CDS | 35.0% |
| TGTTAAGAACCACAGATTTG+GGG | + | tig0004180:18488-18507 | None:intergenic | 35.0% | |
| GTGTTAAGAACCACAGATTT+GGG | + | tig0004180:18489-18508 | None:intergenic | 35.0% | |
| TGTGTTAAGAACCACAGATT+TGG | + | tig0004180:18490-18509 | None:intergenic | 35.0% | |
| AGTAGAAACAATTGATCGGT+AGG | - | tig0004180:18991-19010 | Msa1340540:intron | 35.0% | |
| GTTTCATTACATGTTCTTGC+AGG | - | tig0004180:19113-19132 | Msa1340540:intron | 35.0% | |
| !! | TTTTGGAAAAGGTGCACTAA+TGG | - | tig0004180:19140-19159 | Msa1340540:intron | 35.0% |
| TTGACCACTTATACATTGCT+AGG | - | tig0004180:19171-19190 | Msa1340540:intron | 35.0% | |
| TGACCACTTATACATTGCTA+GGG | - | tig0004180:19172-19191 | Msa1340540:intron | 35.0% | |
| AGCTGTTGAAAAGAGAAAAG+GGG | + | tig0004180:19440-19459 | None:intergenic | 35.0% | |
| CAAGCTGTTGAAAAGAGAAA+AGG | + | tig0004180:19442-19461 | None:intergenic | 35.0% | |
| ! | CTTTTCTCTTTTCAACAGCT+TGG | - | tig0004180:19440-19459 | Msa1340540:intron | 35.0% |
| TCATTTAAGCATGGTTTCTC+CGG | + | tig0004180:19601-19620 | None:intergenic | 35.0% | |
| TTAAATGACGTGACAGAAGT+TGG | - | tig0004180:19613-19632 | Msa1340540:CDS | 35.0% | |
| ! | TCAGCTTCTGTTGGTTGTTT+GGG | + | tig0004180:14643-14662 | None:intergenic | 40.0% |
| TTGACACCATAACACGGAAA+TGG | + | tig0004180:14695-14714 | None:intergenic | 40.0% | |
| ATGGGTTTGACACCATAACA+CGG | + | tig0004180:14701-14720 | None:intergenic | 40.0% | |
| !!! | GTAGTGGATTTTGTTCCTGA+AGG | + | tig0004180:14855-14874 | None:intergenic | 40.0% |
| AATTGAAACGGTGGTTGTAG+TGG | + | tig0004180:14871-14890 | None:intergenic | 40.0% | |
| !! | TGAAGCACGTTGATTTCGAT+AGG | - | tig0004180:14915-14934 | Msa1340540:CDS | 40.0% |
| !! | AAAGACGGTGTTGATGATGA+AGG | - | tig0004180:14962-14981 | Msa1340540:intron | 40.0% |
| !! | AAGACGGTGTTGATGATGAA+GGG | - | tig0004180:14963-14982 | Msa1340540:intron | 40.0% |
| !! | GTTGATGATGAAGGGGAAAA+TGG | - | tig0004180:14971-14990 | Msa1340540:intron | 40.0% |
| AGGTAACACTGTGGTTACAT+TGG | + | tig0004180:15017-15036 | None:intergenic | 40.0% | |
| ATCTTCATCAGGTAACACTG+TGG | + | tig0004180:15026-15045 | None:intergenic | 40.0% | |
| GTGTTACCTGATGAAGATAG+AGG | - | tig0004180:15028-15047 | Msa1340540:intron | 40.0% | |
| AAAATGTACCCGTTGAGAAG+TGG | + | tig0004180:15083-15102 | None:intergenic | 40.0% | |
| ! | TGTGTTCTTTTCTTGCTTGG+TGG | - | tig0004180:15123-15142 | Msa1340540:intron | 40.0% |
| CACTTAAGCCACTAAACACT+AGG | + | tig0004180:15520-15539 | None:intergenic | 40.0% | |
| GTTTAGTGGCTTAAGTGTAG+CGG | - | tig0004180:15523-15542 | Msa1340540:intron | 40.0% | |
| CCACTACACTACAATTGCTA+TGG | + | tig0004180:15611-15630 | None:intergenic | 40.0% | |
| CCATAGCAATTGTAGTGTAG+TGG | - | tig0004180:15608-15627 | Msa1340540:intron | 40.0% | |
| GGGAGAGATTTGAATGAAGA+AGG | - | tig0004180:15629-15648 | Msa1340540:intron | 40.0% | |
| CTCCTTCTTCAAGAAACTTG+TGG | + | tig0004180:15720-15739 | None:intergenic | 40.0% | |
| CACAAGTTTCTTGAAGAAGG+AGG | - | tig0004180:15718-15737 | Msa1340540:intron | 40.0% | |
| TTGGGAACAAATGGAGAAGA+GGG | + | tig0004180:15775-15794 | None:intergenic | 40.0% | |
| TAAGCTTCTTCGTGGTAGAA+GGG | + | tig0004180:15844-15863 | None:intergenic | 40.0% | |
| ATATCTGCTAAGCTTCTTCG+TGG | + | tig0004180:15852-15871 | None:intergenic | 40.0% | |
| AAGCACATGTGCACCATTAA+AGG | + | tig0004180:15939-15958 | None:intergenic | 40.0% | |
| ATTAGAAGTTGTCCATCCGT+GGG | + | tig0004180:15966-15985 | None:intergenic | 40.0% | |
| GCAACAGAAACATTGATCTG+TGG | + | tig0004180:16013-16032 | None:intergenic | 40.0% | |
| TTCAAACTCATGGAACTCCT+TGG | - | tig0004180:16150-16169 | Msa1340540:CDS | 40.0% | |
| !!! | AACTAGCCGATTTTGGAGTA+TGG | + | tig0004180:16331-16350 | None:intergenic | 40.0% |
| CAGGTTCCTCTACCATAAAA+AGG | + | tig0004180:16377-16396 | None:intergenic | 40.0% | |
| !! | AAGTGTTGTTTCTTCTGGCT+CGG | + | tig0004180:16466-16485 | None:intergenic | 40.0% |
| AGCCAGAAGAAACAACACTT+TGG | - | tig0004180:16466-16485 | Msa1340540:CDS | 40.0% | |
| !! | TGCCAAAGTGTTGTTTCTTC+TGG | + | tig0004180:16471-16490 | None:intergenic | 40.0% |
| TCTTCTCACTATTGGTACCT+CGG | - | tig0004180:16515-16534 | Msa1340540:CDS | 40.0% | |
| GAATTGCATCTCAGGTATGT+TGG | - | tig0004180:16547-16566 | Msa1340540:CDS | 40.0% | |
| TTAGACACGGCAGAAGAAAA+CGG | + | tig0004180:16674-16693 | None:intergenic | 40.0% | |
| !! | AGAATTTCACTAGTTCTGGG+GGG | + | tig0004180:16742-16761 | None:intergenic | 40.0% |
| GGATATAGCATCTCCATATC+TGG | + | tig0004180:16791-16810 | None:intergenic | 40.0% | |
| TAAGGAAGAGGATAGAGACT+CGG | + | tig0004180:17192-17211 | None:intergenic | 40.0% | |
| AATCTGCAATCCAGCACATA+TGG | + | tig0004180:17436-17455 | None:intergenic | 40.0% | |
| GTGATATGGGGAATGAAGAA+AGG | + | tig0004180:17675-17694 | None:intergenic | 40.0% | |
| TTCATTCCCCATATCACTCT+TGG | - | tig0004180:17678-17697 | Msa1340540:intron | 40.0% | |
| AAAGCTGCCAAGAGTGATAT+GGG | + | tig0004180:17688-17707 | None:intergenic | 40.0% | |
| AGACTCAATGCAAAAGTGAC+TGG | + | tig0004180:17749-17768 | None:intergenic | 40.0% | |
| CGGTTAAAAGTTACTGCTGA+TGG | + | tig0004180:17838-17857 | None:intergenic | 40.0% | |
| CTTGAGTACTTCTATCAGGA+AGG | + | tig0004180:17930-17949 | None:intergenic | 40.0% | |
| CAAGTAGACATATCACTTGC+GGG | - | tig0004180:17946-17965 | Msa1340540:intron | 40.0% | |
| TCATCAAATCCAGATGTAGC+TGG | - | tig0004180:18024-18043 | Msa1340540:CDS | 40.0% | |
| !! | GTTCCTAGCATGTTGTTTCA+AGG | - | tig0004180:18060-18079 | Msa1340540:CDS | 40.0% |
| GAACCTTGAAACAACATGCT+AGG | + | tig0004180:18066-18085 | None:intergenic | 40.0% | |
| ! | TCTAGTGGATCATTATGCGT+GGG | - | tig0004180:18218-18237 | Msa1340540:CDS | 40.0% |
| CATATCACTTGGAAACAGCT+TGG | + | tig0004180:18256-18275 | None:intergenic | 40.0% | |
| CAGTGTGTCAAAGTTAACTG+CGG | + | tig0004180:18348-18367 | None:intergenic | 40.0% | |
| CAAATCAATCCCCAAATCTG+TGG | - | tig0004180:18476-18495 | Msa1340540:intron | 40.0% | |
| ! | AAAGGTGCACTAATGGTCTT+TGG | - | tig0004180:19147-19166 | Msa1340540:intron | 40.0% |
| ACTTATACATTGCTAGGGCT+GGG | - | tig0004180:19177-19196 | Msa1340540:intron | 40.0% | |
| GCTCTAACCAATTCATGCTA+TGG | + | tig0004180:19282-19301 | None:intergenic | 40.0% | |
| ! | TTCTCTTTTCAACAGCTTGG+TGG | - | tig0004180:19443-19462 | Msa1340540:intron | 40.0% |
| ! | GATGTTTTGTCAGAGATCAC+CGG | - | tig0004180:19579-19598 | Msa1340540:CDS | 40.0% |
| TCTGTCACGTCATTTAAGCA+TGG | + | tig0004180:19610-19629 | None:intergenic | 40.0% | |
| AACATGGAGACAGACATTTG+TGG | - | tig0004180:19636-19655 | Msa1340540:CDS | 40.0% | |
| ACATGGAGACAGACATTTGT+GGG | - | tig0004180:19637-19656 | Msa1340540:CDS | 40.0% | |
| TCTTGACTCTTCTTCCTGTT+TGG | - | tig0004180:19680-19699 | Msa1340540:CDS | 40.0% | |
| CTTGACTCTTCTTCCTGTTT+GGG | - | tig0004180:19681-19700 | Msa1340540:CDS | 40.0% | |
| ! | CTCAGCTTCTGTTGGTTGTT+TGG | + | tig0004180:14644-14663 | None:intergenic | 45.0% |
| ACACTCTTCTCAGCTTCTGT+TGG | + | tig0004180:14652-14671 | None:intergenic | 45.0% | |
| CGTGTTCCATTTCCGTGTTA+TGG | - | tig0004180:14686-14705 | Msa1340540:three_prime_UTR | 45.0% | |
| TCCCTCTAAACTCAGAGTTC+CGG | - | tig0004180:14810-14829 | Msa1340540:CDS | 45.0% | |
| ACCGGAACTCTGAGTTTAGA+GGG | + | tig0004180:14814-14833 | None:intergenic | 45.0% | |
| AACCGGAACTCTGAGTTTAG+AGG | + | tig0004180:14815-14834 | None:intergenic | 45.0% | |
| !! | AACAGTGAACCGGTTTGAAC+CGG | + | tig0004180:14832-14851 | None:intergenic | 45.0% |
| TTCCTGAAGGAACAGTGAAC+CGG | + | tig0004180:14842-14861 | None:intergenic | 45.0% | |
| GTGCTTCAACTTTGCCCATT+TGG | + | tig0004180:14903-14922 | None:intergenic | 45.0% | |
| !! | AGACGGTGTTGATGATGAAG+GGG | - | tig0004180:14964-14983 | Msa1340540:intron | 45.0% |
| GTTAGAAACTGCTACAGGCT+TGG | - | tig0004180:15466-15485 | Msa1340540:intron | 45.0% | |
| CACAAACTGTCGTCGAATAG+AGG | - | tig0004180:15585-15604 | Msa1340540:intron | 45.0% | |
| GGCCACAAGTTTCTTGAAGA+AGG | - | tig0004180:15715-15734 | Msa1340540:intron | 45.0% | |
| TGGGAACAAATGGAGAAGAG+GGG | + | tig0004180:15774-15793 | None:intergenic | 45.0% | |
| GTTGGGAACAAATGGAGAAG+AGG | + | tig0004180:15776-15795 | None:intergenic | 45.0% | |
| CTAAGCTTCTTCGTGGTAGA+AGG | + | tig0004180:15845-15864 | None:intergenic | 45.0% | |
| CATTAGAAGTTGTCCATCCG+TGG | + | tig0004180:15967-15986 | None:intergenic | 45.0% | |
| CAGTCATCTTTGTCCTCACT+TGG | - | tig0004180:16096-16115 | Msa1340540:intron | 45.0% | |
| GTTGTACACAGATCCAAGTG+AGG | + | tig0004180:16112-16131 | None:intergenic | 45.0% | |
| !! | AACCTTTTGGGTGACCAAAG+AGG | - | tig0004180:16233-16252 | Msa1340540:intron | 45.0% |
| ! | TGACCAAAGAGGAGCCTTTT+GGG | - | tig0004180:16244-16263 | Msa1340540:intron | 45.0% |
| !!! | GGAGAAGGCGTTCTTTTCAT+CGG | - | tig0004180:16273-16292 | Msa1340540:intron | 45.0% |
| ! | ACTCCAAAATCGGCTAGTTG+AGG | - | tig0004180:16332-16351 | Msa1340540:intron | 45.0% |
| AAGGTTGTACTTATCGCCAG+TGG | + | tig0004180:16358-16377 | None:intergenic | 45.0% | |
| ATTCAGACAGTCCTGATCCA+CGG | - | tig0004180:16397-16416 | Msa1340540:intron | 45.0% | |
| AGCAAACCAAAGCTAACACG+TGG | + | tig0004180:16429-16448 | None:intergenic | 45.0% | |
| !! | TAGCTTTGGTTTGCTGCGTA+AGG | - | tig0004180:16434-16453 | Msa1340540:CDS | 45.0% |
| ! | TCTGGGGCTTCAGTATAGTT+AGG | + | tig0004180:16773-16792 | None:intergenic | 45.0% |
| CTATACTGAAGCCCCAGATA+TGG | - | tig0004180:16775-16794 | Msa1340540:intron | 45.0% | |
| !! | GGTAACGCTGACTCAACAAA+TGG | + | tig0004180:16812-16831 | None:intergenic | 45.0% |
| TCAGCGTTACCTCTAGCATA+TGG | - | tig0004180:16821-16840 | Msa1340540:intron | 45.0% | |
| ACCTCTAGCATATGGTGTCT+TGG | - | tig0004180:16829-16848 | Msa1340540:intron | 45.0% | |
| CCTCTAGCATATGGTGTCTT+GGG | - | tig0004180:16830-16849 | Msa1340540:intron | 45.0% | |
| GAAATACCTGCCATATGTGC+TGG | - | tig0004180:17423-17442 | Msa1340540:intron | 45.0% | |
| TGCACATAGCCATATCCATC+AGG | + | tig0004180:17600-17619 | None:intergenic | 45.0% | |
| ! | TGATGGATATGGCTATGTGC+AGG | - | tig0004180:17599-17618 | Msa1340540:intron | 45.0% |
| AAGCTGCCAAGAGTGATATG+GGG | + | tig0004180:17687-17706 | None:intergenic | 45.0% | |
| CAAAGCTGCCAAGAGTGATA+TGG | + | tig0004180:17689-17708 | None:intergenic | 45.0% | |
| CATATCACTCTTGGCAGCTT+TGG | - | tig0004180:17687-17706 | Msa1340540:CDS | 45.0% | |
| !! | CAGCTTTGGTGCTATTACTC+AGG | - | tig0004180:17701-17720 | Msa1340540:CDS | 45.0% |
| TCAATGCAAAAGTGACTGGC+TGG | + | tig0004180:17745-17764 | None:intergenic | 45.0% | |
| TGCATCTAAAGGCTGATCCA+TGG | - | tig0004180:17878-17897 | Msa1340540:intron | 45.0% | |
| AACTACACAACACACAGCCA+TGG | + | tig0004180:17898-17917 | None:intergenic | 45.0% | |
| TCCAGATGTAGCTGGAGATT+TGG | - | tig0004180:18032-18051 | Msa1340540:CDS | 45.0% | |
| ACCAAATCTCCAGCTACATC+TGG | + | tig0004180:18036-18055 | None:intergenic | 45.0% | |
| ! | CTCTAGTGGATCATTATGCG+TGG | - | tig0004180:18217-18236 | Msa1340540:CDS | 45.0% |
| CTGCTATTGTATGTGCAGAG+CGG | - | tig0004180:18365-18384 | Msa1340540:CDS | 45.0% | |
| GCAATCACAAGAGGGTGAAT+TGG | + | tig0004180:18408-18427 | None:intergenic | 45.0% | |
| ATTCACCCTCTTGTGATTGC+AGG | - | tig0004180:18408-18427 | Msa1340540:CDS | 45.0% | |
| ACCATCCTGCAATCACAAGA+GGG | + | tig0004180:18416-18435 | None:intergenic | 45.0% | |
| TACCATCCTGCAATCACAAG+AGG | + | tig0004180:18417-18436 | None:intergenic | 45.0% | |
| !! | ATGTTCTTGCAGGGTGCTTT+TGG | - | tig0004180:19123-19142 | Msa1340540:intron | 45.0% |
| !! | TTGCAGGGTGCTTTTGGAAA+AGG | - | tig0004180:19129-19148 | Msa1340540:intron | 45.0% |
| CAGCCCTAGCAATGTATAAG+TGG | + | tig0004180:19178-19197 | None:intergenic | 45.0% | |
| CACTTATACATTGCTAGGGC+TGG | - | tig0004180:19176-19195 | Msa1340540:intron | 45.0% | |
| CTCTCCTCATGTAATGGTCA+CGG | + | tig0004180:19304-19323 | None:intergenic | 45.0% | |
| GTGACCATTACATGAGGAGA+GGG | - | tig0004180:19303-19322 | Msa1340540:intron | 45.0% | |
| TGGACCTCTTTCACTTGCTT+GGG | - | tig0004180:19463-19482 | Msa1340540:CDS | 45.0% | |
| AATCCCCAAGCAAGTGAAAG+AGG | + | tig0004180:19470-19489 | None:intergenic | 45.0% | |
| ACGTGACAGAAGTTGGAACA+TGG | - | tig0004180:19620-19639 | Msa1340540:CDS | 45.0% | |
| CATGGAGACAGACATTTGTG+GGG | - | tig0004180:19638-19657 | Msa1340540:CDS | 45.0% | |
| ATGGAGACAGACATTTGTGG+GGG | - | tig0004180:19639-19658 | Msa1340540:CDS | 45.0% | |
| ! | CTGAGAAGAGTGTGTCTGTG+TGG | - | tig0004180:14659-14678 | Msa1340540:three_prime_UTR | 50.0% |
| AAACGACGTTGCGGTTCAGA+GGG | + | tig0004180:14724-14743 | None:intergenic | 50.0% | |
| AAAACGACGTTGCGGTTCAG+AGG | + | tig0004180:14725-14744 | None:intergenic | 50.0% | |
| CTCAGAGTTCCGGTTCAAAC+CGG | - | tig0004180:14820-14839 | Msa1340540:CDS | 50.0% | |
| ! | AACCGGTTCACTGTTCCTTC+AGG | - | tig0004180:14837-14856 | Msa1340540:CDS | 50.0% |
| CAACCCCTTCCACTTCTCAA+CGG | - | tig0004180:15071-15090 | Msa1340540:CDS | 50.0% | |
| AACCCCTTCCACTTCTCAAC+GGG | - | tig0004180:15072-15091 | Msa1340540:CDS | 50.0% | |
| TACCCGTTGAGAAGTGGAAG+GGG | + | tig0004180:15077-15096 | None:intergenic | 50.0% | |
| GTACCCGTTGAGAAGTGGAA+GGG | + | tig0004180:15078-15097 | None:intergenic | 50.0% | |
| TGTACCCGTTGAGAAGTGGA+AGG | + | tig0004180:15079-15098 | None:intergenic | 50.0% | |
| GGGAACAAATGGAGAAGAGG+GGG | + | tig0004180:15773-15792 | None:intergenic | 50.0% | |
| GCACATGTGCTTGAAACCCA+CGG | - | tig0004180:15947-15966 | Msa1340540:CDS | 50.0% | |
| ATGTGCTTGAAACCCACGGA+TGG | - | tig0004180:15951-15970 | Msa1340540:CDS | 50.0% | |
| GATCAACCTTCTCAGGTCCA+AGG | + | tig0004180:16170-16189 | None:intergenic | 50.0% | |
| TCAGCAGGATCAACCTTCTC+AGG | + | tig0004180:16177-16196 | None:intergenic | 50.0% | |
| CTCCTCTTTGGTCACCCAAA+AGG | + | tig0004180:16238-16257 | None:intergenic | 50.0% | |
| ! | GTGACCAAAGAGGAGCCTTT+TGG | - | tig0004180:16243-16262 | Msa1340540:intron | 50.0% |
| ! | GACCAAAGAGGAGCCTTTTG+GGG | - | tig0004180:16245-16264 | Msa1340540:intron | 50.0% |
| TTCCCCAAAAGGCTCCTCTT+TGG | + | tig0004180:16250-16269 | None:intergenic | 50.0% | |
| !! | TGGCCTCAACTAGCCGATTT+TGG | + | tig0004180:16338-16357 | None:intergenic | 50.0% |
| GGATCAGGACTGTCTGAATC+AGG | + | tig0004180:16396-16415 | None:intergenic | 50.0% | |
| TTCAGACAGTCCTGATCCAC+GGG | - | tig0004180:16398-16417 | Msa1340540:intron | 50.0% | |
| !! | CTTTGGTTTGCTGCGTAAGG+AGG | - | tig0004180:16437-16456 | Msa1340540:CDS | 50.0% |
| TCTCACTATTGGTACCTCGG+TGG | - | tig0004180:16518-16537 | Msa1340540:CDS | 50.0% | |
| GGAGGTAGGAATTGCATCTC+AGG | - | tig0004180:16539-16558 | Msa1340540:CDS | 50.0% | |
| CACGGCAGAAGAAAACGGTA+AGG | + | tig0004180:16669-16688 | None:intergenic | 50.0% | |
| CCCAAGACACCATATGCTAG+AGG | + | tig0004180:16833-16852 | None:intergenic | 50.0% | |
| ACTGTGTAGTGCTGTGACGA+CGG | - | tig0004180:17117-17136 | Msa1340540:intron | 50.0% | |
| TGCAATCCAGCACATATGGC+AGG | + | tig0004180:17432-17451 | None:intergenic | 50.0% | |
| TGGATATGGCTATGTGCAGG+AGG | - | tig0004180:17602-17621 | Msa1340540:intron | 50.0% | |
| TATGGCTATGTGCAGGAGGT+TGG | - | tig0004180:17606-17625 | Msa1340540:intron | 50.0% | |
| GATAGCACAGCACCAGCAAA+GGG | + | tig0004180:17973-17992 | None:intergenic | 50.0% | |
| TGATAGCACAGCACCAGCAA+AGG | + | tig0004180:17974-17993 | None:intergenic | 50.0% | |
| ACCCTCTTGTGATTGCAGGA+TGG | - | tig0004180:18412-18431 | Msa1340540:CDS | 50.0% | |
| AGAGCCGTGACCATTACATG+AGG | - | tig0004180:19297-19316 | Msa1340540:intron | 50.0% | |
| CGTGACCATTACATGAGGAG+AGG | - | tig0004180:19302-19321 | Msa1340540:intron | 50.0% | |
| TGAGCCCTCTCCTCATGTAA+TGG | + | tig0004180:19310-19329 | None:intergenic | 50.0% | |
| GTGGACCTCTTTCACTTGCT+TGG | - | tig0004180:19462-19481 | Msa1340540:CDS | 50.0% | |
| GGACCTCTTTCACTTGCTTG+GGG | - | tig0004180:19464-19483 | Msa1340540:CDS | 50.0% | |
| TCTGCAAGCTCATCCCAAAC+AGG | + | tig0004180:19697-19716 | None:intergenic | 50.0% | |
| ! | TGTTTGGGATGAGCTTGCAG+AGG | - | tig0004180:19696-19715 | Msa1340540:CDS | 50.0% |
| GATGAGCTTGCAGAGGAACT+GGG | - | tig0004180:19703-19722 | Msa1340540:CDS | 50.0% | |
| ACGTTGCGGTTCAGAGGGAT+GGG | + | tig0004180:14719-14738 | None:intergenic | 55.0% | |
| TCTTCGTGGTAGAAGGGTGG+TGG | + | tig0004180:15838-15857 | None:intergenic | 55.0% | |
| GCTTCTTCGTGGTAGAAGGG+TGG | + | tig0004180:15841-15860 | None:intergenic | 55.0% | |
| GGAACTCCTTGGACCTGAGA+AGG | - | tig0004180:16161-16180 | Msa1340540:intron | 55.0% | |
| !! | AGAGGAGCCTTTTGGGGAAC+TGG | - | tig0004180:16251-16270 | Msa1340540:intron | 55.0% |
| !! | GAGGAGCCTTTTGGGGAACT+GGG | - | tig0004180:16252-16271 | Msa1340540:intron | 55.0% |
| CCTTCTCCCAGTTCCCCAAA+AGG | + | tig0004180:16261-16280 | None:intergenic | 55.0% | |
| !! | CCTTTTGGGGAACTGGGAGA+AGG | - | tig0004180:16258-16277 | Msa1340540:intron | 55.0% |
| ! | AATCGGCTAGTTGAGGCCAC+TGG | - | tig0004180:16339-16358 | Msa1340540:intron | 55.0% |
| TCAGACAGTCCTGATCCACG+GGG | - | tig0004180:16399-16418 | Msa1340540:intron | 55.0% | |
| CACTATTGGTACCTCGGTGG+AGG | - | tig0004180:16521-16540 | Msa1340540:CDS | 55.0% | |
| ATTGGTACCTCGGTGGAGGT+AGG | - | tig0004180:16525-16544 | Msa1340540:CDS | 55.0% | |
| TGCAATTCCTACCTCCACCG+AGG | + | tig0004180:16535-16554 | None:intergenic | 55.0% | |
| TACATTGCTAGGGCTGGGAG+TGG | - | tig0004180:19182-19201 | Msa1340540:intron | 55.0% | |
| GGATGAGCTTGCAGAGGAAC+TGG | - | tig0004180:19702-19721 | Msa1340540:CDS | 55.0% | |
| CTTGCAGAGGAACTGGGCAT+AGG | - | tig0004180:19709-19728 | Msa1340540:CDS | 55.0% | |
| GACGTTGCGGTTCAGAGGGA+TGG | + | tig0004180:14720-14739 | None:intergenic | 60.0% | |
| ACAGTCCTGATCCACGGGGT+GGG | - | tig0004180:16403-16422 | Msa1340540:intron | 60.0% | |
| ! | GGTGGGCCACGTGTTAGCTT+TGG | - | tig0004180:16420-16439 | Msa1340540:intron | 60.0% |
| GTGTAGTGCTGTGACGACGG+AGG | - | tig0004180:17120-17139 | Msa1340540:intron | 60.0% | |
| TCACTTGCGGGTCCCTTTGC+TGG | - | tig0004180:17958-17977 | Msa1340540:intron | 60.0% | |
| ! | CTTCCAGTGGGGTGCCTTGA+CGG | - | tig0004180:18593-18612 | Msa1340540:intron | 60.0% |
| GACAGTCCTGATCCACGGGG+TGG | - | tig0004180:16402-16421 | Msa1340540:intron | 65.0% | |
| GCACAGACCTGCCACCGTCA+AGG | + | tig0004180:18610-18629 | None:intergenic | 65.0% | |
| TGACGGTGGCAGGTCTGTGC+AGG | - | tig0004180:18610-18629 | Msa1340540:intron | 65.0% | |
| CTAACACGTGGCCCACCCCG+TGG | + | tig0004180:16417-16436 | None:intergenic | 70.0% | |
| ! | CCACCGTCAAGGCACCCCAC+TGG | + | tig0004180:18599-18618 | None:intergenic | 70.0% |
| ! | CCAGTGGGGTGCCTTGACGG+TGG | - | tig0004180:18596-18615 | Msa1340540:intron | 70.0% |
| ! | TGGGGTGCCTTGACGGTGGC+AGG | - | tig0004180:18600-18619 | Msa1340540:intron | 70.0% |
| CGTGGCCCACCCCGTGGATC+AGG | + | tig0004180:16411-16430 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0004180 | gene | 14592 | 19962 | 14592 | ID=Msa1340540;Name=Msa1340540 |
| tig0004180 | mRNA | 14592 | 19962 | 14592 | ID=Msa1340540-mRNA-1;Parent=Msa1340540;Name=Msa1340540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=190|1|1|1|1|1|10|212|542 |
| tig0004180 | exon | 14592 | 14962 | 14592 | ID=Msa1340540-mRNA-1:exon:2740;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 15046 | 15096 | 15046 | ID=Msa1340540-mRNA-1:exon:2739;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 15351 | 15419 | 15351 | ID=Msa1340540-mRNA-1:exon:2738;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 15923 | 15992 | 15923 | ID=Msa1340540-mRNA-1:exon:2737;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 16121 | 16171 | 16121 | ID=Msa1340540-mRNA-1:exon:2736;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 16427 | 16638 | 16427 | ID=Msa1340540-mRNA-1:exon:2735;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 16832 | 16933 | 16832 | ID=Msa1340540-mRNA-1:exon:2734;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 17686 | 17826 | 17686 | ID=Msa1340540-mRNA-1:exon:2733;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 17994 | 18455 | 17994 | ID=Msa1340540-mRNA-1:exon:2732;Parent=Msa1340540-mRNA-1 |
| tig0004180 | exon | 19461 | 19962 | 19461 | ID=Msa1340540-mRNA-1:exon:2731;Parent=Msa1340540-mRNA-1 |
| tig0004180 | five_prime_UTR | 19773 | 19962 | 19773 | ID=Msa1340540-mRNA-1:five_prime_utr;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 19461 | 19772 | 19461 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 17994 | 18455 | 17994 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 17686 | 17826 | 17686 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 16832 | 16933 | 16832 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 16427 | 16638 | 16427 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 16121 | 16171 | 16121 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 15923 | 15992 | 15923 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 15351 | 15419 | 15351 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 15046 | 15096 | 15046 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | CDS | 14804 | 14962 | 14804 | ID=Msa1340540-mRNA-1:cds;Parent=Msa1340540-mRNA-1 |
| tig0004180 | three_prime_UTR | 14592 | 14803 | 14592 | ID=Msa1340540-mRNA-1:three_prime_utr;Parent=Msa1340540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
