Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288190 | XP_039686064.1 | 93.846 | 520 | 31 | 1 | 1 | 519 | 1 | 520 | 0.0 | 1025 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288190 | sp|Q9LMA1|FMO1_ARATH | 39.147 | 516 | 301 | 10 | 4 | 514 | 12 | 519 | 4.97e-129 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288190 | A0A396JCJ9 | 93.846 | 520 | 31 | 1 | 1 | 519 | 1 | 520 | 0.0 | 1025 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012440 | Msa0288190 | 0.820411 | 6.959049e-53 | -8.615850e-47 |
| Msa0057240 | Msa0288190 | 0.819377 | 1.199212e-52 | -8.615850e-47 |
| Msa0084500 | Msa0288190 | 0.807660 | 4.535785e-50 | -8.615850e-47 |
| Msa0141100 | Msa0288190 | 0.810579 | 1.074378e-50 | -8.615850e-47 |
| Msa0149560 | Msa0288190 | 0.824359 | 8.424176e-54 | -8.615850e-47 |
| Msa0173090 | Msa0288190 | 0.802530 | 5.370233e-49 | -8.615850e-47 |
| Msa0176470 | Msa0288190 | 0.808144 | 3.577788e-50 | -8.615850e-47 |
| Msa0191040 | Msa0288190 | 0.881193 | 2.942469e-70 | -8.615850e-47 |
| Msa0206800 | Msa0288190 | 0.925740 | 1.217460e-90 | -8.615850e-47 |
| Msa0219190 | Msa0288190 | 0.802295 | 6.002636e-49 | -8.615850e-47 |
| Msa0220300 | Msa0288190 | 0.842370 | 2.696029e-58 | -8.615850e-47 |
| Msa0221090 | Msa0288190 | 0.801832 | 7.474586e-49 | -8.615850e-47 |
| Msa0233340 | Msa0288190 | 0.881010 | 3.423258e-70 | -8.615850e-47 |
| Msa0236110 | Msa0288190 | 0.832447 | 9.402519e-56 | -8.615850e-47 |
| Msa0251240 | Msa0288190 | 0.824206 | 9.149803e-54 | -8.615850e-47 |
| Msa0273990 | Msa0288190 | 0.818466 | 1.931263e-52 | -8.615850e-47 |
| Msa0277290 | Msa0288190 | 0.836338 | 9.921917e-57 | -8.615850e-47 |
| Msa0288190 | Msa0288200 | 0.930693 | 1.128528e-93 | -8.615850e-47 |
| Msa0288190 | Msa0301200 | 0.813269 | 2.788591e-51 | -8.615850e-47 |
| Msa0288190 | Msa0311690 | 0.882767 | 7.900446e-71 | -8.615850e-47 |
| Msa0288190 | Msa0314630 | 0.830132 | 3.488040e-55 | -8.615850e-47 |
| Msa0288190 | Msa0315250 | 0.806738 | 7.111169e-50 | -8.615850e-47 |
| Msa0288190 | Msa0326540 | 0.930204 | 2.300371e-93 | -8.615850e-47 |
| Msa0288190 | Msa0331530 | 0.806358 | 8.550272e-50 | -8.615850e-47 |
| Msa0288190 | Msa0331540 | 0.801738 | 7.814691e-49 | -8.615850e-47 |
| Msa0288190 | Msa0371560 | 0.803782 | 2.958329e-49 | -8.615850e-47 |
| Msa0288190 | Msa0373960 | 0.836730 | 7.884660e-57 | -8.615850e-47 |
| Msa0288190 | Msa0374850 | 0.807354 | 5.266320e-50 | -8.615850e-47 |
| Msa0288190 | Msa0375090 | 0.803522 | 3.348819e-49 | -8.615850e-47 |
| Msa0288190 | Msa0407780 | 0.809037 | 2.306540e-50 | -8.615850e-47 |
| Msa0288190 | Msa0423100 | 0.837744 | 4.338262e-57 | -8.615850e-47 |
| Msa0288190 | Msa0469260 | 0.815518 | 8.874310e-52 | -8.615850e-47 |
| Msa0288190 | Msa0481110 | 0.805341 | 1.398553e-49 | -8.615850e-47 |
| Msa0288190 | Msa0490480 | 0.800867 | 1.178366e-48 | -8.615850e-47 |
| Msa0288190 | Msa0520510 | 0.841037 | 6.057264e-58 | -8.615850e-47 |
| Msa0288190 | Msa0531430 | 0.843137 | 1.685769e-58 | -8.615850e-47 |
| Msa0288190 | Msa0534570 | 0.836675 | 8.144248e-57 | -8.615850e-47 |
| Msa0288190 | Msa0534590 | 0.834210 | 3.418430e-56 | -8.615850e-47 |
| Msa0288190 | Msa0575740 | 0.815518 | 8.872313e-52 | -8.615850e-47 |
| Msa0288190 | Msa0590800 | 0.817118 | 3.893076e-52 | -8.615850e-47 |
| Msa0288190 | Msa0611380 | 0.854312 | 1.338178e-61 | -8.615850e-47 |
| Msa0288190 | Msa0628640 | 0.803738 | 3.020975e-49 | -8.615850e-47 |
| Msa0288190 | Msa0631120 | 0.834882 | 2.317796e-56 | -8.615850e-47 |
| Msa0288190 | Msa0666030 | 0.850184 | 2.001179e-60 | -8.615850e-47 |
| Msa0288190 | Msa0667850 | 0.808036 | 3.772314e-50 | -8.615850e-47 |
| Msa0288190 | Msa0669340 | 0.813989 | 1.936122e-51 | -8.615850e-47 |
| Msa0288190 | Msa0716450 | 0.813276 | 2.778739e-51 | -8.615850e-47 |
| Msa0288190 | Msa0717260 | 0.807205 | 5.663857e-50 | -8.615850e-47 |
| Msa0288190 | Msa0758320 | 0.808134 | 3.594863e-50 | -8.615850e-47 |
| Msa0288190 | Msa0799030 | 0.821882 | 3.186855e-53 | -8.615850e-47 |
| Msa0288190 | Msa0810020 | 0.811838 | 5.730749e-51 | -8.615850e-47 |
| Msa0288190 | Msa0812820 | 0.810375 | 1.189392e-50 | -8.615850e-47 |
| Msa0288190 | Msa0823400 | 0.820790 | 5.693236e-53 | -8.615850e-47 |
| Msa0288190 | Msa0837980 | 0.810860 | 9.342029e-51 | -8.615850e-47 |
| Msa0288190 | Msa0853320 | 0.822176 | 2.724318e-53 | -8.615850e-47 |
| Msa0288190 | Msa0870620 | 0.824869 | 6.388715e-54 | -8.615850e-47 |
| Msa0288190 | Msa0870690 | 0.810605 | 1.060774e-50 | -8.615850e-47 |
| Msa0288190 | Msa0880710 | 0.846846 | 1.679944e-59 | -8.615850e-47 |
| Msa0288190 | Msa0885060 | 0.814064 | 1.863202e-51 | -8.615850e-47 |
| Msa0288190 | Msa0979510 | 0.821422 | 4.071192e-53 | -8.615850e-47 |
| Msa0288190 | Msa0999340 | 0.834522 | 2.855422e-56 | -8.615850e-47 |
| Msa0288190 | Msa0999350 | 0.806472 | 8.091448e-50 | -8.615850e-47 |
| Msa0288190 | Msa0999390 | 0.816615 | 5.048122e-52 | -8.615850e-47 |
| Msa0288190 | Msa0999400 | 0.801681 | 8.027633e-49 | -8.615850e-47 |
| Msa0288190 | Msa1002620 | 0.805979 | 1.027480e-49 | -8.615850e-47 |
| Msa0288190 | Msa1033560 | 0.858236 | 9.461266e-63 | -8.615850e-47 |
| Msa0288190 | Msa1034680 | 0.800531 | 1.379534e-48 | -8.615850e-47 |
| Msa0288190 | Msa1073340 | 0.843425 | 1.412213e-58 | -8.615850e-47 |
| Msa0288190 | Msa1073350 | 0.835136 | 2.000041e-56 | -8.615850e-47 |
| Msa0288190 | Msa1079930 | 0.805192 | 1.503425e-49 | -8.615850e-47 |
| Msa0288190 | Msa1113850 | 0.871458 | 6.730507e-67 | -8.615850e-47 |
| Msa0288190 | Msa1160400 | 0.857990 | 1.119679e-62 | -8.615850e-47 |
| Msa0288190 | Msa1179520 | 0.816419 | 5.584338e-52 | -8.615850e-47 |
| Msa0288190 | Msa1203000 | 0.801582 | 8.411994e-49 | -8.615850e-47 |
| Msa0288190 | Msa1211550 | 0.822945 | 1.805670e-53 | -8.615850e-47 |
| Msa0288190 | Msa1217940 | 0.812534 | 4.039916e-51 | -8.615850e-47 |
| Msa0288190 | Msa1218480 | 0.824403 | 8.225540e-54 | -8.615850e-47 |
| Msa0288190 | Msa1258050 | 0.802000 | 6.905181e-49 | -8.615850e-47 |
| Msa0288190 | Msa1271260 | 0.803299 | 3.724348e-49 | -8.615850e-47 |
| Msa0288190 | Msa1339940 | 0.804934 | 1.702363e-49 | -8.615850e-47 |
| Msa0288190 | Msa1345420 | 0.830143 | 3.467248e-55 | -8.615850e-47 |
| Msa0288190 | Msa1420060 | 0.800377 | 1.483343e-48 | -8.615850e-47 |
| Msa0288190 | Msa1429420 | 0.816232 | 6.149072e-52 | -8.615850e-47 |
| Msa0288190 | Msa1435480 | 0.832595 | 8.644734e-56 | -8.615850e-47 |
| Msa0288190 | Msa1437190 | 0.809914 | 1.494745e-50 | -8.615850e-47 |
| Msa0288190 | Msa1440340 | 0.842016 | 3.345275e-58 | -8.615850e-47 |
| Msa0288190 | Msa1442630 | 0.810851 | 9.384481e-51 | -8.615850e-47 |
| Msa0288190 | Msa1443840 | 0.808111 | 3.637091e-50 | -8.615850e-47 |
| Msa0288190 | Msa1452060 | 0.805850 | 1.093723e-49 | -8.615850e-47 |
| Msa0288190 | Msa1458910 | 0.832772 | 7.813132e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288190 | MtrunA17_Chr2g0305211 | 93.846 | 520 | 31 | 1 | 1 | 519 | 1 | 520 | 0.0 | 1025 |
| Msa0288190 | MtrunA17_Chr2g0305231 | 93.846 | 520 | 31 | 1 | 1 | 519 | 1 | 520 | 0.0 | 1025 |
| Msa0288190 | MtrunA17_Chr2g0304721 | 78.846 | 520 | 106 | 2 | 1 | 519 | 1 | 517 | 0.0 | 855 |
| Msa0288190 | MtrunA17_Chr2g0304651 | 75.192 | 520 | 126 | 2 | 1 | 519 | 1 | 518 | 0.0 | 816 |
| Msa0288190 | MtrunA17_Chr2g0301661 | 39.181 | 513 | 301 | 8 | 5 | 513 | 14 | 519 | 2.08e-124 | 374 |
| Msa0288190 | MtrunA17_Chr2g0301471 | 39.494 | 514 | 300 | 8 | 4 | 513 | 13 | 519 | 2.99e-122 | 368 |
| Msa0288190 | MtrunA17_Chr4g0070101 | 40.447 | 492 | 280 | 10 | 27 | 513 | 36 | 519 | 3.97e-122 | 368 |
| Msa0288190 | MtrunA17_Chr4g0070111 | 39.223 | 283 | 167 | 4 | 233 | 514 | 1 | 279 | 1.90e-67 | 219 |
| Msa0288190 | MtrunA17_Chr2g0286701 | 37.872 | 235 | 141 | 4 | 1 | 233 | 10 | 241 | 6.78e-56 | 189 |
| Msa0288190 | MtrunA17_Chr4g0070121 | 44.000 | 200 | 111 | 1 | 27 | 225 | 36 | 235 | 4.94e-52 | 177 |
| Msa0288190 | MtrunA17_Chr2g0286681 | 40.171 | 117 | 68 | 2 | 272 | 388 | 4 | 118 | 6.97e-22 | 90.9 |
| Msa0288190 | MtrunA17_Chr7g0268621 | 26.692 | 266 | 159 | 9 | 2 | 265 | 3 | 234 | 4.76e-17 | 83.2 |
| Msa0288190 | MtrunA17_Chr1g0182991 | 25.668 | 374 | 214 | 18 | 7 | 376 | 27 | 340 | 1.92e-16 | 81.6 |
| Msa0288190 | MtrunA17_Chr8g0352461 | 27.381 | 252 | 126 | 9 | 5 | 232 | 4 | 222 | 2.58e-16 | 81.3 |
| Msa0288190 | MtrunA17_Chr2g0286671 | 37.624 | 101 | 61 | 2 | 414 | 513 | 1 | 100 | 1.08e-15 | 73.2 |
| Msa0288190 | MtrunA17_Chr8g0352481 | 25.397 | 252 | 130 | 8 | 5 | 232 | 4 | 221 | 2.90e-15 | 78.2 |
| Msa0288190 | MtrunA17_Chr1g0169111 | 26.385 | 379 | 210 | 20 | 6 | 376 | 103 | 420 | 5.18e-14 | 74.3 |
| Msa0288190 | MtrunA17_Chr3g0091441 | 25.397 | 252 | 139 | 6 | 3 | 229 | 11 | 238 | 7.32e-13 | 70.5 |
| Msa0288190 | MtrunA17_Chr4g0025641 | 27.556 | 225 | 127 | 9 | 1 | 223 | 12 | 202 | 7.46e-13 | 68.2 |
| Msa0288190 | MtrunA17_Chr5g0412881 | 23.810 | 378 | 219 | 16 | 2 | 374 | 3 | 316 | 2.35e-12 | 68.6 |
| Msa0288190 | MtrunA17_Chr3g0125691 | 24.311 | 399 | 226 | 17 | 1 | 390 | 3 | 334 | 9.27e-12 | 67.0 |
| Msa0288190 | MtrunA17_Chr3g0125701 | 23.810 | 399 | 228 | 16 | 1 | 390 | 3 | 334 | 4.36e-11 | 64.7 |
| Msa0288190 | MtrunA17_Chr3g0125711 | 23.559 | 399 | 229 | 16 | 1 | 390 | 3 | 334 | 9.46e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288190 | AT1G19250.1 | 39.147 | 516 | 301 | 10 | 4 | 514 | 12 | 519 | 5.06e-130 | 389 |
| Msa0288190 | AT5G45180.1 | 36.382 | 492 | 260 | 11 | 4 | 490 | 12 | 455 | 5.59e-105 | 322 |
| Msa0288190 | AT1G62560.2 | 25.197 | 254 | 131 | 10 | 3 | 229 | 11 | 232 | 8.52e-14 | 73.6 |
| Msa0288190 | AT1G62560.1 | 25.197 | 254 | 131 | 10 | 3 | 229 | 11 | 232 | 9.49e-14 | 73.9 |
| Msa0288190 | AT1G62620.2 | 25.000 | 252 | 135 | 9 | 4 | 229 | 12 | 235 | 3.21e-13 | 72.0 |
| Msa0288190 | AT1G62620.1 | 25.000 | 252 | 135 | 9 | 4 | 229 | 12 | 235 | 3.83e-13 | 72.0 |
| Msa0288190 | AT1G63370.2 | 25.000 | 252 | 135 | 7 | 4 | 229 | 12 | 235 | 5.72e-13 | 70.5 |
| Msa0288190 | AT1G63370.1 | 25.000 | 252 | 135 | 7 | 4 | 229 | 12 | 235 | 6.19e-13 | 71.2 |
| Msa0288190 | AT4G28720.1 | 26.509 | 381 | 207 | 20 | 6 | 376 | 26 | 343 | 6.77e-13 | 71.2 |
| Msa0288190 | AT1G21430.1 | 26.273 | 373 | 208 | 14 | 5 | 374 | 9 | 317 | 7.48e-13 | 70.9 |
| Msa0288190 | AT1G65860.1 | 22.327 | 318 | 173 | 11 | 3 | 279 | 11 | 295 | 1.39e-12 | 70.1 |
| Msa0288190 | AT4G32540.1 | 24.138 | 377 | 213 | 17 | 7 | 376 | 23 | 333 | 2.63e-12 | 69.3 |
| Msa0288190 | AT4G32540.2 | 24.138 | 377 | 215 | 17 | 7 | 376 | 23 | 335 | 1.02e-11 | 67.4 |
| Msa0288190 | AT1G12200.2 | 25.197 | 254 | 135 | 7 | 3 | 229 | 12 | 237 | 3.57e-11 | 65.5 |
| Msa0288190 | AT1G12200.1 | 25.197 | 254 | 135 | 7 | 3 | 229 | 12 | 237 | 3.64e-11 | 65.9 |
Find 122 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTACCTTTAAAGATTTC+TGG | 0.118162 | 2_3:+32414759 | None:intergenic |
| TGCAAATATGTTCTACAAAT+TGG | 0.167769 | 2_3:-32415847 | Msa0288190:CDS |
| TATATTTATTGCTACAATTC+TGG | 0.199707 | 2_3:+32411255 | None:intergenic |
| GGGCTTATCTTCTCCATTAA+TGG | 0.222471 | 2_3:+32413285 | None:intergenic |
| AAAGAAGGTTTAACCATTAA+TGG | 0.223564 | 2_3:-32413298 | Msa0288190:CDS |
| GGAAGTCTTGTTTGTTAGTT+TGG | 0.241397 | 2_3:+32415749 | None:intergenic |
| AAATAAGTGGGGTGGGGTGG+GGG | 0.249747 | 2_3:-32411309 | Msa0288190:three_prime_UTR |
| ACGCTTAATATCTTCTTATA+TGG | 0.259962 | 2_3:+32415953 | None:intergenic |
| TTGTGATTTCTTTATATTGA+TGG | 0.268932 | 2_3:+32413336 | None:intergenic |
| TGTTATGAAACTAAAGAAAT+AGG | 0.275402 | 2_3:+32415980 | None:intergenic |
| TGGAAGTCCATTTGGTTCTA+AGG | 0.280378 | 2_3:-32415530 | Msa0288190:CDS |
| AATAACTAGGTCAGCTTCTT+GGG | 0.283161 | 2_3:+32413264 | None:intergenic |
| AAAATAAGTGGGGTGGGGTG+GGG | 0.284960 | 2_3:-32411310 | Msa0288190:three_prime_UTR |
| AGGTAAAGTTATGCATTCTT+TGG | 0.285374 | 2_3:-32414745 | Msa0288190:CDS |
| TCAATGGCTGGCGCATCTTT+TGG | 0.285635 | 2_3:-32411651 | Msa0288190:CDS |
| AAATGAAGTCATGGGAATTA+TGG | 0.290096 | 2_3:-32415561 | Msa0288190:CDS |
| GAAACCAGTGTGTAGTTCTT+TGG | 0.303585 | 2_3:+32414464 | None:intergenic |
| TTACATCTTCTTGTAATTGT+AGG | 0.305849 | 2_3:-32411348 | Msa0288190:three_prime_UTR |
| ACAAAATAAGTGGGGTGGGG+TGG | 0.309757 | 2_3:-32411312 | Msa0288190:three_prime_UTR |
| ATTCCACAATTGGCAATAAT+AGG | 0.330890 | 2_3:-32411719 | Msa0288190:CDS |
| ATGATGGCATTGGTGGAATA+TGG | 0.334253 | 2_3:-32415798 | Msa0288190:CDS |
| GAATAACTAGGTCAGCTTCT+TGG | 0.335174 | 2_3:+32413263 | None:intergenic |
| CATGCATTACGTGTGGGATA+TGG | 0.336927 | 2_3:-32411529 | Msa0288190:CDS |
| AATAAGTGGGGTGGGGTGGG+GGG | 0.340258 | 2_3:-32411308 | Msa0288190:three_prime_UTR |
| TCTTGCACTTGTTGATTACT+TGG | 0.340440 | 2_3:+32415682 | None:intergenic |
| AGCTGCAGTCTTGTTGTCTA+AGG | 0.341399 | 2_3:+32414713 | None:intergenic |
| GACATTGCGGGCATTAATCT+TGG | 0.343163 | 2_3:-32414430 | Msa0288190:CDS |
| CTTTACCTTTAAAGATTTCT+GGG | 0.345088 | 2_3:+32414760 | None:intergenic |
| CAAAATAAGTGGGGTGGGGT+GGG | 0.348110 | 2_3:-32411311 | Msa0288190:three_prime_UTR |
| AAAGGCCCAGAAATCTTTAA+AGG | 0.357841 | 2_3:-32414765 | Msa0288190:CDS |
| CCCATGGAAAATCTGTAAAC+TGG | 0.363372 | 2_3:+32415728 | None:intergenic |
| ATTCTTGCCACGGGATATAA+AGG | 0.367862 | 2_3:-32413244 | Msa0288190:CDS |
| ATCTTGAAGAAAACTGTAAT+CGG | 0.368612 | 2_3:+32413420 | None:intergenic |
| TCATTGATATTGATTATGTT+GGG | 0.373374 | 2_3:-32415597 | Msa0288190:CDS |
| TTGGAATTGAATCTTATGTA+TGG | 0.382205 | 2_3:+32415622 | None:intergenic |
| GCTGAGCTATTTGAACCATA+TGG | 0.382963 | 2_3:-32411446 | Msa0288190:CDS |
| AAGTTTCAGTATAAAAGAAA+TGG | 0.388381 | 2_3:-32415917 | Msa0288190:exon |
| TTGTTTGTTAGTTTGGAGTT+TGG | 0.394924 | 2_3:+32415756 | None:intergenic |
| ATACTGAAACTTATAATAGT+TGG | 0.395748 | 2_3:+32415928 | None:intergenic |
| GCTATTTGCAGTAATATTGA+TGG | 0.401435 | 2_3:+32411280 | None:intergenic |
| AATTTGTAGAACATATTTGC+AGG | 0.401814 | 2_3:+32415849 | None:intergenic |
| GTCATTGATATTGATTATGT+TGG | 0.404807 | 2_3:-32415598 | Msa0288190:CDS |
| ATGTTGAAACATATTTGAAA+TGG | 0.409240 | 2_3:-32413474 | Msa0288190:CDS |
| CTTTGCATTGGAAAGTATAG+TGG | 0.419251 | 2_3:-32414819 | Msa0288190:CDS |
| ATGCCCGCAATGTCAAAATC+TGG | 0.420705 | 2_3:+32414439 | None:intergenic |
| CATTTGGTTCTAAGGGAACT+TGG | 0.423541 | 2_3:-32415522 | Msa0288190:CDS |
| AGCTTTAGCTTCTGCAAAGA+AGG | 0.430511 | 2_3:-32413313 | Msa0288190:CDS |
| TCATCAGATTCGTAGACAAT+TGG | 0.431340 | 2_3:+32415817 | None:intergenic |
| AGAGTTACAATAGTAGGCTC+AGG | 0.434337 | 2_3:-32414672 | Msa0288190:CDS |
| ATAATCAATATCAATGACTT+TGG | 0.438062 | 2_3:+32415603 | None:intergenic |
| TGGGAATTATGGAGTGGTAA+TGG | 0.443970 | 2_3:-32415550 | Msa0288190:CDS |
| TATTAGTATTCATTCACTTA+CGG | 0.445129 | 2_3:+32411399 | None:intergenic |
| TTGAAATCAGTGGGGCCATA+TGG | 0.449343 | 2_3:+32411431 | None:intergenic |
| AAGTTTGTCATTCTTTGCAT+TGG | 0.451719 | 2_3:-32414831 | Msa0288190:CDS |
| AACAAGAGAGTTACAATAGT+AGG | 0.452094 | 2_3:-32414678 | Msa0288190:CDS |
| AGTGGTAATGGAAGTCCATT+TGG | 0.462695 | 2_3:-32415538 | Msa0288190:CDS |
| GGAAGTCCATTTGGTTCTAA+GGG | 0.467978 | 2_3:-32415529 | Msa0288190:CDS |
| GTATATACAAACCTGTAGAT+AGG | 0.475274 | 2_3:+32413145 | None:intergenic |
| GGCCACTTTACTTTCACCAT+TGG | 0.477134 | 2_3:-32414335 | Msa0288190:intron |
| GAATCTTATGTATGGAATGA+TGG | 0.480663 | 2_3:+32415630 | None:intergenic |
| TCACCCTCGAATTCCACAAT+TGG | 0.481469 | 2_3:-32411729 | Msa0288190:CDS |
| TATCCTATTATTGCCAATTG+TGG | 0.489403 | 2_3:+32411716 | None:intergenic |
| AATGTTGCAATTGTTGGGGC+AGG | 0.496768 | 2_3:-32415889 | Msa0288190:CDS |
| TATAGTAAGTACAAAATAAG+TGG | 0.497166 | 2_3:-32411322 | Msa0288190:three_prime_UTR |
| AAGTACAAAATAAGTGGGGT+GGG | 0.510534 | 2_3:-32411316 | Msa0288190:three_prime_UTR |
| CTCATGAAGAAATGAAGTCA+TGG | 0.511087 | 2_3:-32415570 | Msa0288190:CDS |
| ACTCAACGGTTCCTATCTAC+AGG | 0.514369 | 2_3:-32413156 | Msa0288190:intron |
| ATATCTCTACATGTCGAGCT+GGG | 0.514908 | 2_3:-32413399 | Msa0288190:CDS |
| AGCTGCCACTGAAGAAGTAC+GGG | 0.515558 | 2_3:-32413450 | Msa0288190:CDS |
| GAAATTCTTAGTATCTTCTA+CGG | 0.519004 | 2_3:+32415492 | None:intergenic |
| TGGAAAATGATGTGAAAATG+TGG | 0.519496 | 2_3:-32411595 | Msa0288190:CDS |
| GATATCTCTACATGTCGAGC+TGG | 0.519980 | 2_3:-32413400 | Msa0288190:CDS |
| ATAGTAAGTACAAAATAAGT+GGG | 0.521051 | 2_3:-32411321 | Msa0288190:three_prime_UTR |
| AAGTGGCCACAAGGCTAAGT+AGG | 0.524274 | 2_3:+32414350 | None:intergenic |
| TCTTGAAGAAAACTGTAATC+GGG | 0.524939 | 2_3:+32413421 | None:intergenic |
| CTAAGTAGGAATGGTTCTCC+AGG | 0.528761 | 2_3:+32414364 | None:intergenic |
| GAATCTGATGATGGCATTGG+TGG | 0.530274 | 2_3:-32415805 | Msa0288190:CDS |
| ATTGCCAATTGTGGAATTCG+AGG | 0.531426 | 2_3:+32411725 | None:intergenic |
| AAGCTGCCACTGAAGAAGTA+CGG | 0.532930 | 2_3:-32413451 | Msa0288190:CDS |
| AAAAGACCATTGAAATCAGT+GGG | 0.537907 | 2_3:+32411422 | None:intergenic |
| TATGGCCCCACTGATTTCAA+TGG | 0.539975 | 2_3:-32411428 | Msa0288190:CDS |
| CAAGTTCCCTTAGAACCAAA+TGG | 0.541301 | 2_3:+32415523 | None:intergenic |
| AAAGTAGAGAGAAATAGAGA+AGG | 0.543386 | 2_3:+32416012 | None:intergenic |
| GAAAAGACCATTGAAATCAG+TGG | 0.545197 | 2_3:+32411421 | None:intergenic |
| ATTGTCTACGAATCTGATGA+TGG | 0.545835 | 2_3:-32415814 | Msa0288190:CDS |
| ATTGTTGGGGCAGGAATAAG+TGG | 0.555531 | 2_3:-32415880 | Msa0288190:CDS |
| TTGCCAATTGTGGAATTCGA+GGG | 0.558750 | 2_3:+32411726 | None:intergenic |
| ACTTCCTAGCATAAGAGAGA+TGG | 0.562419 | 2_3:-32411615 | Msa0288190:CDS |
| CATTGATATTGATTATGTTG+GGG | 0.562755 | 2_3:-32415596 | Msa0288190:CDS |
| TTGGTCACCTTTATATCCCG+TGG | 0.565549 | 2_3:+32413237 | None:intergenic |
| TAAGTACAAAATAAGTGGGG+TGG | 0.571482 | 2_3:-32411317 | Msa0288190:three_prime_UTR |
| TCATGAAGAAATGAAGTCAT+GGG | 0.573176 | 2_3:-32415569 | Msa0288190:CDS |
| GCTGAATGTGCAAATGCAAA+TGG | 0.573735 | 2_3:-32414627 | Msa0288190:intron |
| TGACCTAGTTATTCTTGCCA+CGG | 0.575160 | 2_3:-32413254 | Msa0288190:CDS |
| TACCAATGGTGAAAGTAAAG+TGG | 0.578127 | 2_3:+32414333 | None:intergenic |
| GCCACAAGGCTAAGTAGGAA+TGG | 0.579646 | 2_3:+32414355 | None:intergenic |
| TTCATATTTACATACCTCGA+TGG | 0.580358 | 2_3:+32415468 | None:intergenic |
| CTAATGAAATGAGATGTCAA+TGG | 0.582072 | 2_3:-32411667 | Msa0288190:CDS |
| CAAGATCATGCATTACGTGT+GGG | 0.582997 | 2_3:-32411535 | Msa0288190:CDS |
| GCCACTGAAGAAGTACGGGC+TGG | 0.586016 | 2_3:-32413446 | Msa0288190:CDS |
| GACCTAGTTATTCTTGCCAC+GGG | 0.588033 | 2_3:-32413253 | Msa0288190:CDS |
| ATAACTAGGTCAGCTTCTTG+GGG | 0.588569 | 2_3:+32413265 | None:intergenic |
| TCAAGATCATGCATTACGTG+TGG | 0.593649 | 2_3:-32411536 | Msa0288190:CDS |
| GTACTAAAAGCTCCGCAAAA+CGG | 0.593919 | 2_3:+32414392 | None:intergenic |
| GAGTTACAATAGTAGGCTCA+GGG | 0.602052 | 2_3:-32414671 | Msa0288190:CDS |
| ACCATTCCTACTTAGCCTTG+TGG | 0.606013 | 2_3:-32414356 | Msa0288190:CDS |
| TGAAATGAGATGTCAATGGC+TGG | 0.610788 | 2_3:-32411663 | Msa0288190:CDS |
| TACGAATCTGATGATGGCAT+TGG | 0.612809 | 2_3:-32415808 | Msa0288190:CDS |
| GTGAAAGTAAAGTGGCCACA+AGG | 0.620197 | 2_3:+32414341 | None:intergenic |
| ATCCCGTGGCAAGAATAACT+AGG | 0.620371 | 2_3:+32413251 | None:intergenic |
| ACCAGCCCGTACTTCTTCAG+TGG | 0.620675 | 2_3:+32413445 | None:intergenic |
| TTTGTAAATTCAGGTTCACA+AGG | 0.623646 | 2_3:-32414856 | Msa0288190:intron |
| GGAAAATGATGTGAAAATGT+GGG | 0.624056 | 2_3:-32411594 | Msa0288190:CDS |
| AGTACAAAATAAGTGGGGTG+GGG | 0.631400 | 2_3:-32411315 | Msa0288190:three_prime_UTR |
| GTTCTTTGGATAATTGTGCA+AGG | 0.631927 | 2_3:+32414478 | None:intergenic |
| CAACGAATCAGCAGACTCAA+CGG | 0.636407 | 2_3:-32413170 | Msa0288190:CDS |
| TATCTCTACATGTCGAGCTG+GGG | 0.655759 | 2_3:-32413398 | Msa0288190:CDS |
| AAGTCATGGGAATTATGGAG+TGG | 0.662418 | 2_3:-32415556 | Msa0288190:CDS |
| TACTAAGAATTTCACCATCG+AGG | 0.677150 | 2_3:-32415482 | Msa0288190:intron |
| TTATCCAAAGAACTACACAC+TGG | 0.687255 | 2_3:-32414468 | Msa0288190:CDS |
| TAGTAAGTACAAAATAAGTG+GGG | 0.725232 | 2_3:-32411320 | Msa0288190:three_prime_UTR |
| AAAGACCATTGAAATCAGTG+GGG | 0.785537 | 2_3:+32411423 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | + | chr2_3:32415222-32415241 | None:intergenic | 0.0% |
| !!! | TTTAAGACAAATTTTATAAT+GGG | - | chr2_3:32412030-32412049 | Msa0288190:intron | 10.0% |
| !!! | TTTTTTTATTCAAAATTTGA+AGG | - | chr2_3:32412179-32412198 | Msa0288190:intron | 10.0% |
| !!! | TAAAATATTTAATTAGCTTA+AGG | - | chr2_3:32412350-32412369 | Msa0288190:intron | 10.0% |
| !!! | TTTCCTTTTTTTTTTTTTAT+GGG | + | chr2_3:32412384-32412403 | None:intergenic | 10.0% |
| !!! | TTTTCCTTTTTTTTTTTTTA+TGG | + | chr2_3:32412385-32412404 | None:intergenic | 10.0% |
| !!! | ATTATTAAATTTTTAGAGAA+CGG | - | chr2_3:32413780-32413799 | Msa0288190:intron | 10.0% |
| !!! | TTTTTTGACAAAATAATAAA+AGG | - | chr2_3:32413928-32413947 | Msa0288190:intron | 10.0% |
| !! | ATCATTTAGTTAATTAAATA+TGG | - | chr2_3:32414313-32414332 | Msa0288190:intron | 10.0% |
| !! | TCATTTAGTTAATTAAATAT+GGG | - | chr2_3:32414314-32414333 | Msa0288190:intron | 10.0% |
| !!! | GATTTTTTTTTTTTTTTGAA+AGG | + | chr2_3:32414566-32414585 | None:intergenic | 10.0% |
| !!! | AAAAAATCATTTTTGTTTAA+GGG | + | chr2_3:32414765-32414784 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATATTAGCTAT+TGG | + | chr2_3:32414881-32414900 | None:intergenic | 10.0% |
| !! | AATATTTACTAAAAATAGTA+AGG | + | chr2_3:32415327-32415346 | None:intergenic | 10.0% |
| !! | ATAAATATGATATAAATAGT+GGG | + | chr2_3:32415464-32415483 | None:intergenic | 10.0% |
| !! | TATAAATATGATATAAATAG+TGG | + | chr2_3:32415465-32415484 | None:intergenic | 10.0% |
| !!! | TTTCATATTTTTTTCTTGTT+TGG | - | chr2_3:32411889-32411908 | Msa0288190:intron | 15.0% |
| !!! | TTCATATTTTTTTCTTGTTT+GGG | - | chr2_3:32411890-32411909 | Msa0288190:intron | 15.0% |
| !!! | GTTTAAGACAAATTTTATAA+TGG | - | chr2_3:32412029-32412048 | Msa0288190:intron | 15.0% |
| !! | TCAACTAATTAATAATAAAG+CGG | - | chr2_3:32413016-32413035 | Msa0288190:intron | 15.0% |
| !!! | TTTTTTAATATCGTTAATCT+TGG | - | chr2_3:32413181-32413200 | Msa0288190:CDS | 15.0% |
| !! | AATATATGTAAAAGTTTACA+TGG | - | chr2_3:32413234-32413253 | Msa0288190:CDS | 15.0% |
| !! | TAAAAATAAAACAAGATTGA+GGG | + | chr2_3:32413383-32413402 | None:intergenic | 15.0% |
| !! | ATAAAAATAAAACAAGATTG+AGG | + | chr2_3:32413384-32413403 | None:intergenic | 15.0% |
| !!! | TAGTTAATTTTTATCTATCT+TGG | - | chr2_3:32413408-32413427 | Msa0288190:CDS | 15.0% |
| !!! | TTATTAAATTTTTAGAGAAC+GGG | - | chr2_3:32413781-32413800 | Msa0288190:intron | 15.0% |
| !!! | AAAAATCATTTTTGTTTAAG+GGG | + | chr2_3:32414764-32414783 | None:intergenic | 15.0% |
| !!! | GAAAAAATCATTTTTGTTTA+AGG | + | chr2_3:32414766-32414785 | None:intergenic | 15.0% |
| !!! | ACATTAATTTTAAATCAGAT+GGG | + | chr2_3:32414797-32414816 | None:intergenic | 15.0% |
| !! | TAAATGTTAAGTAGATATAA+CGG | + | chr2_3:32414841-32414860 | None:intergenic | 15.0% |
| !! | CTTCCATTAAAAAAAATAAA+AGG | - | chr2_3:32415014-32415033 | Msa0288190:intron | 15.0% |
| !!! | TGTCCTTTTATTTTTTTTAA+TGG | + | chr2_3:32415020-32415039 | None:intergenic | 15.0% |
| !! | TTAAAAAAAATAAAAGGACA+AGG | - | chr2_3:32415020-32415039 | Msa0288190:intron | 15.0% |
| !!! | TTAATAATTACAGTTTTTTG+AGG | - | chr2_3:32415153-32415172 | Msa0288190:intron | 15.0% |
| !!! | TAATAATTACAGTTTTTTGA+GGG | - | chr2_3:32415154-32415173 | Msa0288190:intron | 15.0% |
| !! | ATATATATATATTGGTACAA+TGG | + | chr2_3:32415214-32415233 | None:intergenic | 15.0% |
| !! | CTTTATAACAATAAATTTCA+TGG | - | chr2_3:32415351-32415370 | Msa0288190:intron | 15.0% |
| !! | AAATTTACTACAAAGAATAA+GGG | - | chr2_3:32415395-32415414 | Msa0288190:intron | 15.0% |
| !! | TGTTATGAAACTAAAGAAAT+AGG | + | chr2_3:32411312-32411331 | None:intergenic | 20.0% |
| !! | ATACTGAAACTTATAATAGT+TGG | + | chr2_3:32411364-32411383 | None:intergenic | 20.0% |
| !! | AAGTTTCAGTATAAAAGAAA+TGG | - | chr2_3:32411372-32411391 | Msa0288190:three_prime_UTR | 20.0% |
| !! | AAAAAAATGTTGCAATTGTT+GGG | - | chr2_3:32411395-32411414 | Msa0288190:exon | 20.0% |
| !! | ATAATCAATATCAATGACTT+TGG | + | chr2_3:32411689-32411708 | None:intergenic | 20.0% |
| !!! | TCATTGATATTGATTATGTT+GGG | - | chr2_3:32411692-32411711 | Msa0288190:CDS | 20.0% |
| !!! | CTTCTTTTTCTTTTTCATTT+TGG | - | chr2_3:32411862-32411881 | Msa0288190:intron | 20.0% |
| !! | GTTCCCATAAAAAAAAAAAA+AGG | - | chr2_3:32412378-32412397 | Msa0288190:intron | 20.0% |
| !! | GTTTGAATATTTGTAAATTC+AGG | - | chr2_3:32412424-32412443 | Msa0288190:intron | 20.0% |
| !! | GATCTATATGATATAAGTTT+CGG | + | chr2_3:32413108-32413127 | None:intergenic | 20.0% |
| !! | ATGTTGAAACATATTTGAAA+TGG | - | chr2_3:32413815-32413834 | Msa0288190:intron | 20.0% |
| !!! | ATTTTGTCAAAAAAATGATC+AGG | + | chr2_3:32413922-32413941 | None:intergenic | 20.0% |
| !! | TTGTGATTTCTTTATATTGA+TGG | + | chr2_3:32413956-32413975 | None:intergenic | 20.0% |
| !! | AAATGAGATATTCAATTTGA+TGG | - | chr2_3:32414644-32414663 | Msa0288190:CDS | 20.0% |
| !! | AGAGAATTTCAATTGATAAA+AGG | - | chr2_3:32414697-32414716 | Msa0288190:CDS | 20.0% |
| !!! | CATTAATTTTAAATCAGATG+GGG | + | chr2_3:32414796-32414815 | None:intergenic | 20.0% |
| !!! | GACATTAATTTTAAATCAGA+TGG | + | chr2_3:32414798-32414817 | None:intergenic | 20.0% |
| !! | GAAATTTACTACAAAGAATA+AGG | - | chr2_3:32415394-32415413 | Msa0288190:intron | 20.0% |
| !! | AATATATGGTCATCTAAAAA+AGG | + | chr2_3:32415432-32415451 | None:intergenic | 20.0% |
| !!! | TTTATGATGTGTTAAGTTTT+TGG | - | chr2_3:32415496-32415515 | Msa0288190:CDS | 20.0% |
| !! | TATTAGTATTCATTCACTTA+CGG | + | chr2_3:32415893-32415912 | None:intergenic | 20.0% |
| !! | TATAGTAAGTACAAAATAAG+TGG | - | chr2_3:32415967-32415986 | Msa0288190:five_prime_UTR | 20.0% |
| !! | ATAGTAAGTACAAAATAAGT+GGG | - | chr2_3:32415968-32415987 | Msa0288190:five_prime_UTR | 20.0% |
| !! | TATATTTATTGCTACAATTC+TGG | + | chr2_3:32416037-32416056 | None:intergenic | 20.0% |
| ! | ACGCTTAATATCTTCTTATA+TGG | + | chr2_3:32411339-32411358 | None:intergenic | 25.0% |
| ! | GAAAAAAATGTTGCAATTGT+TGG | - | chr2_3:32411394-32411413 | Msa0288190:exon | 25.0% |
| ! | AAAAAATGTTGCAATTGTTG+GGG | - | chr2_3:32411396-32411415 | Msa0288190:exon | 25.0% |
| ! | AATTTGTAGAACATATTTGC+AGG | + | chr2_3:32411443-32411462 | None:intergenic | 25.0% |
| ! | TGCAAATATGTTCTACAAAT+TGG | - | chr2_3:32411442-32411461 | Msa0288190:CDS | 25.0% |
| ! | TTGGAATTGAATCTTATGTA+TGG | + | chr2_3:32411670-32411689 | None:intergenic | 25.0% |
| !! | GTCATTGATATTGATTATGT+TGG | - | chr2_3:32411691-32411710 | Msa0288190:CDS | 25.0% |
| !! | CATTGATATTGATTATGTTG+GGG | - | chr2_3:32411693-32411712 | Msa0288190:CDS | 25.0% |
| ! | GAAATTCTTAGTATCTTCTA+CGG | + | chr2_3:32411800-32411819 | None:intergenic | 25.0% |
| ! | AAGAAAAAATCAAATTGCAG+TGG | - | chr2_3:32411959-32411978 | Msa0288190:intron | 25.0% |
| ! | CTACACAAATAAACATGAAA+GGG | + | chr2_3:32412257-32412276 | None:intergenic | 25.0% |
| ! | ACTACACAAATAAACATGAA+AGG | + | chr2_3:32412258-32412277 | None:intergenic | 25.0% |
| ! | ATGTTTATTTGTGTAGTTGT+TGG | - | chr2_3:32412261-32412280 | Msa0288190:intron | 25.0% |
| ! | ATTTATTCACGTGTATAGTA+TGG | + | chr2_3:32412310-32412329 | None:intergenic | 25.0% |
| !! | CTTTACCTTTAAAGATTTCT+GGG | + | chr2_3:32412532-32412551 | None:intergenic | 25.0% |
| !! | ACTTTACCTTTAAAGATTTC+TGG | + | chr2_3:32412533-32412552 | None:intergenic | 25.0% |
| !! | AATCAATTTTTCACCTCTAT+AGG | - | chr2_3:32412778-32412797 | Msa0288190:intron | 25.0% |
| ! | TTTAATATCGTTAATCTTGG+TGG | - | chr2_3:32413184-32413203 | Msa0288190:CDS | 25.0% |
| !! | ATTTTTATCTATCTTGGAGT+TGG | - | chr2_3:32413414-32413433 | Msa0288190:CDS | 25.0% |
| ! | ATTAGTTAGATTCTTCTTAG+GGG | + | chr2_3:32413565-32413584 | None:intergenic | 25.0% |
| !! | GATTAGTTAGATTCTTCTTA+GGG | + | chr2_3:32413566-32413585 | None:intergenic | 25.0% |
| !! | AGATTAGTTAGATTCTTCTT+AGG | + | chr2_3:32413567-32413586 | None:intergenic | 25.0% |
| ! | ATCTTGAAGAAAACTGTAAT+CGG | + | chr2_3:32413872-32413891 | None:intergenic | 25.0% |
| ! | AAAGAAGGTTTAACCATTAA+TGG | - | chr2_3:32413991-32414010 | Msa0288190:intron | 25.0% |
| !!! | ATTGACTTTTCAAGAGAAAA+TGG | - | chr2_3:32414184-32414203 | Msa0288190:intron | 25.0% |
| ! | TCATTTATTTGACATTGACA+TGG | - | chr2_3:32414396-32414415 | Msa0288190:CDS | 25.0% |
| ! | ATGTATGTTACAGTGTTAAA+TGG | - | chr2_3:32414444-32414463 | Msa0288190:CDS | 25.0% |
| !!! | TTTTTGAAAGGATTCCAATT+GGG | + | chr2_3:32414554-32414573 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAGGATTCCAAT+TGG | + | chr2_3:32414555-32414574 | None:intergenic | 25.0% |
| ! | GAATTTCAATTGATAAAAGG+TGG | - | chr2_3:32414700-32414719 | Msa0288190:CDS | 25.0% |
| ! | ATATATATTGGTACAATGGT+AGG | + | chr2_3:32415210-32415229 | None:intergenic | 25.0% |
| ! | TATATATAGACCTACCATAA+AGG | - | chr2_3:32415289-32415308 | Msa0288190:intron | 25.0% |
| ! | ACACATCATAAAATATCATG+TGG | + | chr2_3:32415488-32415507 | None:intergenic | 25.0% |
| ! | AAAAACTCTTCTTTCTTCTA+TGG | + | chr2_3:32415821-32415840 | None:intergenic | 25.0% |
| ! | TTACATCTTCTTGTAATTGT+AGG | - | chr2_3:32415941-32415960 | Msa0288190:five_prime_UTR | 25.0% |
| ! | TAGTAAGTACAAAATAAGTG+GGG | - | chr2_3:32415969-32415988 | Msa0288190:five_prime_UTR | 25.0% |
| AAAGTAGAGAGAAATAGAGA+AGG | + | chr2_3:32411280-32411299 | None:intergenic | 30.0% | |
| ! | TTGTTTGTTAGTTTGGAGTT+TGG | + | chr2_3:32411536-32411555 | None:intergenic | 30.0% |
| ! | TCTTTTATAGAAGAATCCCA+TGG | + | chr2_3:32411580-32411599 | None:intergenic | 30.0% |
| GAATCTTATGTATGGAATGA+TGG | + | chr2_3:32411662-32411681 | None:intergenic | 30.0% | |
| TCATGAAGAAATGAAGTCAT+GGG | - | chr2_3:32411720-32411739 | Msa0288190:CDS | 30.0% | |
| AAATGAAGTCATGGGAATTA+TGG | - | chr2_3:32411728-32411747 | Msa0288190:CDS | 30.0% | |
| TTCATATTTACATACCTCGA+TGG | + | chr2_3:32411824-32411843 | None:intergenic | 30.0% | |
| AAAAAATCAAATTGCAGTGG+TGG | - | chr2_3:32411962-32411981 | Msa0288190:intron | 30.0% | |
| TCTTAAACCTCCAAACATAT+TGG | + | chr2_3:32412017-32412036 | None:intergenic | 30.0% | |
| !! | AAATGTTTCTCTAGCTTTGT+TGG | + | chr2_3:32412106-32412125 | None:intergenic | 30.0% |
| ! | GAAGGTTTAAAACCCTAATT+TGG | - | chr2_3:32412197-32412216 | Msa0288190:intron | 30.0% |
| ! | TTTGTAAATTCAGGTTCACA+AGG | - | chr2_3:32412433-32412452 | Msa0288190:intron | 30.0% |
| AAGTTTGTCATTCTTTGCAT+TGG | - | chr2_3:32412458-32412477 | Msa0288190:intron | 30.0% | |
| AGGTAAAGTTATGCATTCTT+TGG | - | chr2_3:32412544-32412563 | Msa0288190:intron | 30.0% | |
| AACAAGAGAGTTACAATAGT+AGG | - | chr2_3:32412611-32412630 | Msa0288190:intron | 30.0% | |
| ! | CTTATATTTCAACCGTTTTG+CGG | - | chr2_3:32412885-32412904 | Msa0288190:intron | 30.0% |
| GTAGTAATAGATCTTACCAA+TGG | + | chr2_3:32412973-32412992 | None:intergenic | 30.0% | |
| TAAAACAAGATTGAGGGATT+AGG | + | chr2_3:32413377-32413396 | None:intergenic | 30.0% | |
| GAAGAATCTAACTAATCTCT+AGG | - | chr2_3:32413569-32413588 | Msa0288190:intron | 30.0% | |
| ! | TATTTTATGTTTGCTCACTG+TGG | - | chr2_3:32413629-32413648 | Msa0288190:intron | 30.0% |
| TCTTGAAGAAAACTGTAATC+GGG | + | chr2_3:32413871-32413890 | None:intergenic | 30.0% | |
| ATAAAGGTGACCAAAAACTT+AGG | - | chr2_3:32414061-32414080 | Msa0288190:intron | 30.0% | |
| ! | TGAATATGCTCCTAAGTTTT+TGG | + | chr2_3:32414074-32414093 | None:intergenic | 30.0% |
| GTATATACAAACCTGTAGAT+AGG | + | chr2_3:32414147-32414166 | None:intergenic | 30.0% | |
| !! | CGACTCGGTAAAATAATTAT+TGG | + | chr2_3:32414237-32414256 | None:intergenic | 30.0% |
| !! | ATTATTTTACCGAGTCGAAA+TGG | - | chr2_3:32414240-32414259 | Msa0288190:intron | 30.0% |
| !! | TTATTTTACCGAGTCGAAAT+GGG | - | chr2_3:32414241-32414260 | Msa0288190:intron | 30.0% |
| TTAATGAACTTCACCAAAAG+AGG | + | chr2_3:32414283-32414302 | None:intergenic | 30.0% | |
| AAAATTGCAACATGTACATG+CGG | + | chr2_3:32414377-32414396 | None:intergenic | 30.0% | |
| AGGAAATTTGACTATGGTAT+TGG | + | chr2_3:32414505-32414524 | None:intergenic | 30.0% | |
| ! | AATTAGAATCGATTCCCAAT+TGG | - | chr2_3:32414537-32414556 | Msa0288190:intron | 30.0% |
| TGCTTCTTAACCATCAAATA+TGG | - | chr2_3:32414592-32414611 | Msa0288190:intron | 30.0% | |
| GCTTCTTAACCATCAAATAT+GGG | - | chr2_3:32414593-32414612 | Msa0288190:intron | 30.0% | |
| !! | AATCATTTTTGTTTAAGGGG+TGG | + | chr2_3:32414761-32414780 | None:intergenic | 30.0% |
| GTTAAGTAGATATAACGGTT+TGG | + | chr2_3:32414836-32414855 | None:intergenic | 30.0% | |
| ! | CGTTTTTCTTGTCCTATTTT+CGG | - | chr2_3:32414958-32414977 | Msa0288190:intron | 30.0% |
| AGAGATGATACAAGAGTAAA+AGG | + | chr2_3:32414992-32415011 | None:intergenic | 30.0% | |
| GTCTTAAAATCCTTTATGGT+AGG | + | chr2_3:32415302-32415321 | None:intergenic | 30.0% | |
| CATCTAAAAAAGGTTAAGGA+CGG | + | chr2_3:32415422-32415441 | None:intergenic | 30.0% | |
| TGGTCATCTAAAAAAGGTTA+AGG | + | chr2_3:32415426-32415445 | None:intergenic | 30.0% | |
| ATTCCACAATTGGCAATAAT+AGG | - | chr2_3:32415570-32415589 | Msa0288190:CDS | 30.0% | |
| TATCCTATTATTGCCAATTG+TGG | + | chr2_3:32415576-32415595 | None:intergenic | 30.0% | |
| CTAATGAAATGAGATGTCAA+TGG | - | chr2_3:32415622-32415641 | Msa0288190:CDS | 30.0% | |
| TGGAAAATGATGTGAAAATG+TGG | - | chr2_3:32415694-32415713 | Msa0288190:CDS | 30.0% | |
| GGAAAATGATGTGAAAATGT+GGG | - | chr2_3:32415695-32415714 | Msa0288190:CDS | 30.0% | |
| AAAAGACCATTGAAATCAGT+GGG | + | chr2_3:32415870-32415889 | None:intergenic | 30.0% | |
| GCTATTTGCAGTAATATTGA+TGG | + | chr2_3:32416012-32416031 | None:intergenic | 30.0% | |
| TCATCAGATTCGTAGACAAT+TGG | + | chr2_3:32411475-32411494 | None:intergenic | 35.0% | |
| ATTGTCTACGAATCTGATGA+TGG | - | chr2_3:32411475-32411494 | Msa0288190:CDS | 35.0% | |
| !! | GGAAGTCTTGTTTGTTAGTT+TGG | + | chr2_3:32411543-32411562 | None:intergenic | 35.0% |
| ! | TCCAGTTTACAGATTTTCCA+TGG | - | chr2_3:32411560-32411579 | Msa0288190:CDS | 35.0% |
| ! | CCAGTTTACAGATTTTCCAT+GGG | - | chr2_3:32411561-32411580 | Msa0288190:CDS | 35.0% |
| ! | TCTTGCACTTGTTGATTACT+TGG | + | chr2_3:32411610-32411629 | None:intergenic | 35.0% |
| GATGGAAAAATGTTGAGCAT+AGG | + | chr2_3:32411644-32411663 | None:intergenic | 35.0% | |
| CTCATGAAGAAATGAAGTCA+TGG | - | chr2_3:32411719-32411738 | Msa0288190:CDS | 35.0% | |
| TACTAAGAATTTCACCATCG+AGG | - | chr2_3:32411807-32411826 | Msa0288190:intron | 35.0% | |
| TAGAACTATTCGAACTCACA+TGG | - | chr2_3:32411986-32412005 | Msa0288190:intron | 35.0% | |
| !! | AGCTTTGTTGGTTAGAAAGA+AGG | + | chr2_3:32412094-32412113 | None:intergenic | 35.0% |
| GCTAGAGAAACATTTGTAGT+TGG | - | chr2_3:32412111-32412130 | Msa0288190:intron | 35.0% | |
| AAACCCTAATTTGGATTGCT+TGG | - | chr2_3:32412206-32412225 | Msa0288190:intron | 35.0% | |
| CACAAATAAACATGAAAGGG+AGG | + | chr2_3:32412254-32412273 | None:intergenic | 35.0% | |
| TGGTGTTCGATAAGGTAAAA+TGG | + | chr2_3:32412290-32412309 | None:intergenic | 35.0% | |
| GTATAGTATGGTGTTCGATA+AGG | + | chr2_3:32412298-32412317 | None:intergenic | 35.0% | |
| ! | CTTTGCATTGGAAAGTATAG+TGG | - | chr2_3:32412470-32412489 | Msa0288190:intron | 35.0% |
| AAAGGCCCAGAAATCTTTAA+AGG | - | chr2_3:32412524-32412543 | Msa0288190:intron | 35.0% | |
| GTTCTTTGGATAATTGTGCA+AGG | + | chr2_3:32412814-32412833 | None:intergenic | 35.0% | |
| TTATCCAAAGAACTACACAC+TGG | - | chr2_3:32412821-32412840 | Msa0288190:intron | 35.0% | |
| !! | TCTTCCAGATTTTGACATTG+CGG | - | chr2_3:32412846-32412865 | Msa0288190:intron | 35.0% |
| TACCAATGGTGAAAGTAAAG+TGG | + | chr2_3:32412959-32412978 | None:intergenic | 35.0% | |
| TTTCTTAGACTCACCAATCA+AGG | - | chr2_3:32413148-32413167 | Msa0288190:intron | 35.0% | |
| TTCTTAGACTCACCAATCAA+GGG | - | chr2_3:32413149-32413168 | Msa0288190:intron | 35.0% | |
| AAAAACGCATAACCCTTGAT+TGG | + | chr2_3:32413164-32413183 | None:intergenic | 35.0% | |
| !!! | TGTATTGGTTCGTAGGATTT+TGG | - | chr2_3:32413351-32413370 | Msa0288190:CDS | 35.0% |
| ATATGGGATCTCAAACTAGT+TGG | - | chr2_3:32413657-32413676 | Msa0288190:intron | 35.0% | |
| TGAAGCAATAGAATAGAGGA+AGG | + | chr2_3:32413688-32413707 | None:intergenic | 35.0% | |
| ATGCTGAAGCAATAGAATAG+AGG | + | chr2_3:32413692-32413711 | None:intergenic | 35.0% | |
| AATAACTAGGTCAGCTTCTT+GGG | + | chr2_3:32414028-32414047 | None:intergenic | 35.0% | |
| AAATTGCAACATGTACATGC+GGG | + | chr2_3:32414376-32414395 | None:intergenic | 35.0% | |
| !! | TGACTATGGTATTGGTGAAA+CGG | + | chr2_3:32414497-32414516 | None:intergenic | 35.0% |
| ! | CTCTCTAGGAAATTTGACTA+TGG | + | chr2_3:32414511-32414530 | None:intergenic | 35.0% |
| CATAGTCAAATTTCCTAGAG+AGG | - | chr2_3:32414509-32414528 | Msa0288190:intron | 35.0% | |
| TTCTAATTCTACTCCTCTCT+AGG | + | chr2_3:32414525-32414544 | None:intergenic | 35.0% | |
| ATTGTCTCTCCCATATTTGA+TGG | + | chr2_3:32414605-32414624 | None:intergenic | 35.0% | |
| ! | TTTCTTGTCCTATTTTCGGA+TGG | - | chr2_3:32414962-32414981 | Msa0288190:intron | 35.0% |
| GGTCGTCTTAAAATCCTTTA+TGG | + | chr2_3:32415306-32415325 | None:intergenic | 35.0% | |
| ATGTCAATTGTACTGTATCC+AGG | - | chr2_3:32415529-32415548 | Msa0288190:CDS | 35.0% | |
| ! | TTTTCCATCTCTCTTATGCT+AGG | + | chr2_3:32415681-32415700 | None:intergenic | 35.0% |
| AAAGACCATTGAAATCAGTG+GGG | + | chr2_3:32415869-32415888 | None:intergenic | 35.0% | |
| GAAAAGACCATTGAAATCAG+TGG | + | chr2_3:32415871-32415890 | None:intergenic | 35.0% | |
| TAAGTACAAAATAAGTGGGG+TGG | - | chr2_3:32415972-32415991 | Msa0288190:five_prime_UTR | 35.0% | |
| AAGTACAAAATAAGTGGGGT+GGG | - | chr2_3:32415973-32415992 | Msa0288190:five_prime_UTR | 35.0% | |
| !! | TACGAATCTGATGATGGCAT+TGG | - | chr2_3:32411481-32411500 | Msa0288190:CDS | 40.0% |
| !! | ATGATGGCATTGGTGGAATA+TGG | - | chr2_3:32411491-32411510 | Msa0288190:CDS | 40.0% |
| CCCATGGAAAATCTGTAAAC+TGG | + | chr2_3:32411564-32411583 | None:intergenic | 40.0% | |
| AAGTCATGGGAATTATGGAG+TGG | - | chr2_3:32411733-32411752 | Msa0288190:CDS | 40.0% | |
| TGGGAATTATGGAGTGGTAA+TGG | - | chr2_3:32411739-32411758 | Msa0288190:CDS | 40.0% | |
| !! | AGTGGTAATGGAAGTCCATT+TGG | - | chr2_3:32411751-32411770 | Msa0288190:intron | 40.0% |
| !! | TGGAAGTCCATTTGGTTCTA+AGG | - | chr2_3:32411759-32411778 | Msa0288190:intron | 40.0% |
| !! | GGAAGTCCATTTGGTTCTAA+GGG | - | chr2_3:32411760-32411779 | Msa0288190:intron | 40.0% |
| CAAGTTCCCTTAGAACCAAA+TGG | + | chr2_3:32411769-32411788 | None:intergenic | 40.0% | |
| !! | CATTTGGTTCTAAGGGAACT+TGG | - | chr2_3:32411767-32411786 | Msa0288190:intron | 40.0% |
| AACCTCCAAACATATTGGAC+CGG | + | chr2_3:32412012-32412031 | None:intergenic | 40.0% | |
| AGGGGGAACTTAGGAATATT+TGG | + | chr2_3:32412500-32412519 | None:intergenic | 40.0% | |
| AATATTCCTAAGTTCCCCCT+TGG | - | chr2_3:32412500-32412519 | Msa0288190:intron | 40.0% | |
| AGAGTTACAATAGTAGGCTC+AGG | - | chr2_3:32412617-32412636 | Msa0288190:intron | 40.0% | |
| GAGTTACAATAGTAGGCTCA+GGG | - | chr2_3:32412618-32412637 | Msa0288190:intron | 40.0% | |
| GCTGAATGTGCAAATGCAAA+TGG | - | chr2_3:32412662-32412681 | Msa0288190:intron | 40.0% | |
| GAAACCAGTGTGTAGTTCTT+TGG | + | chr2_3:32412828-32412847 | None:intergenic | 40.0% | |
| !! | CTTCCAGATTTTGACATTGC+GGG | - | chr2_3:32412847-32412866 | Msa0288190:intron | 40.0% |
| GTACTAAAAGCTCCGCAAAA+CGG | + | chr2_3:32412900-32412919 | None:intergenic | 40.0% | |
| GTAGCATTACATCGCTGTAT+TGG | - | chr2_3:32413336-32413355 | Msa0288190:CDS | 40.0% | |
| TGCTCACTGTGGTTGTTATA+TGG | - | chr2_3:32413640-32413659 | Msa0288190:intron | 40.0% | |
| GCTCACTGTGGTTGTTATAT+GGG | - | chr2_3:32413641-32413660 | Msa0288190:intron | 40.0% | |
| ATATCTCTACATGTCGAGCT+GGG | - | chr2_3:32413890-32413909 | Msa0288190:intron | 40.0% | |
| ! | AGCTTTAGCTTCTGCAAAGA+AGG | - | chr2_3:32413976-32413995 | Msa0288190:intron | 40.0% |
| GGGCTTATCTTCTCCATTAA+TGG | + | chr2_3:32414007-32414026 | None:intergenic | 40.0% | |
| ATAACTAGGTCAGCTTCTTG+GGG | + | chr2_3:32414027-32414046 | None:intergenic | 40.0% | |
| GAATAACTAGGTCAGCTTCT+TGG | + | chr2_3:32414029-32414048 | None:intergenic | 40.0% | |
| TGACCTAGTTATTCTTGCCA+CGG | - | chr2_3:32414035-32414054 | Msa0288190:intron | 40.0% | |
| ATTCTTGCCACGGGATATAA+AGG | - | chr2_3:32414045-32414064 | Msa0288190:intron | 40.0% | |
| ! | CTTCCAAACGATTCCTCTTT+TGG | - | chr2_3:32414267-32414286 | Msa0288190:intron | 40.0% |
| TCACCAAAAGAGGAATCGTT+TGG | + | chr2_3:32414273-32414292 | None:intergenic | 40.0% | |
| TTTGACATTGACATGGCAAG+CGG | - | chr2_3:32414403-32414422 | Msa0288190:CDS | 40.0% | |
| !! | ACTATGGTATTGGTGAAACG+GGG | + | chr2_3:32414495-32414514 | None:intergenic | 40.0% |
| !! | GACTATGGTATTGGTGAAAC+GGG | + | chr2_3:32414496-32414515 | None:intergenic | 40.0% |
| !! | AAGGAGTACCATCCGAAAAT+AGG | + | chr2_3:32414973-32414992 | None:intergenic | 40.0% |
| GTGGGTGTGCATCTAATATA+TGG | + | chr2_3:32415446-32415465 | None:intergenic | 40.0% | |
| TTGCCAATTGTGGAATTCGA+GGG | + | chr2_3:32415566-32415585 | None:intergenic | 40.0% | |
| ATTGCCAATTGTGGAATTCG+AGG | + | chr2_3:32415567-32415586 | None:intergenic | 40.0% | |
| TGAAATGAGATGTCAATGGC+TGG | - | chr2_3:32415626-32415645 | Msa0288190:CDS | 40.0% | |
| ACTTCCTAGCATAAGAGAGA+TGG | - | chr2_3:32415674-32415693 | Msa0288190:CDS | 40.0% | |
| TCAAGATCATGCATTACGTG+TGG | - | chr2_3:32415753-32415772 | Msa0288190:CDS | 40.0% | |
| CAAGATCATGCATTACGTGT+GGG | - | chr2_3:32415754-32415773 | Msa0288190:CDS | 40.0% | |
| GCTGAGCTATTTGAACCATA+TGG | - | chr2_3:32415843-32415862 | Msa0288190:CDS | 40.0% | |
| AGTACAAAATAAGTGGGGTG+GGG | - | chr2_3:32415974-32415993 | Msa0288190:five_prime_UTR | 40.0% | |
| AATGTTGCAATTGTTGGGGC+AGG | - | chr2_3:32411400-32411419 | Msa0288190:exon | 45.0% | |
| ATTGTTGGGGCAGGAATAAG+TGG | - | chr2_3:32411409-32411428 | Msa0288190:exon | 45.0% | |
| !! | GAATCTGATGATGGCATTGG+TGG | - | chr2_3:32411484-32411503 | Msa0288190:CDS | 45.0% |
| ACTATTCGAACTCACATGGC+CGG | - | chr2_3:32411990-32412009 | Msa0288190:intron | 45.0% | |
| GGGCCAAGCAATCCAAATTA+GGG | + | chr2_3:32412212-32412231 | None:intergenic | 45.0% | |
| !! | ATTTCTGGGCCTTTTCCAAG+GGG | + | chr2_3:32412518-32412537 | None:intergenic | 45.0% |
| !! | GATTTCTGGGCCTTTTCCAA+GGG | + | chr2_3:32412519-32412538 | None:intergenic | 45.0% |
| !! | AGATTTCTGGGCCTTTTCCA+AGG | + | chr2_3:32412520-32412539 | None:intergenic | 45.0% |
| !! | AGCTGCAGTCTTGTTGTCTA+AGG | + | chr2_3:32412579-32412598 | None:intergenic | 45.0% |
| AGGATGAGTGACTCCTATAG+AGG | + | chr2_3:32412794-32412813 | None:intergenic | 45.0% | |
| ATGCCCGCAATGTCAAAATC+TGG | + | chr2_3:32412853-32412872 | None:intergenic | 45.0% | |
| GACATTGCGGGCATTAATCT+TGG | - | chr2_3:32412859-32412878 | Msa0288190:intron | 45.0% | |
| ! | GAGCTTTTAGTACACAAGCC+TGG | - | chr2_3:32412907-32412926 | Msa0288190:intron | 45.0% |
| CTAAGTAGGAATGGTTCTCC+AGG | + | chr2_3:32412928-32412947 | None:intergenic | 45.0% | |
| !! | ACCATTCCTACTTAGCCTTG+TGG | - | chr2_3:32412933-32412952 | Msa0288190:intron | 45.0% |
| GTGAAAGTAAAGTGGCCACA+AGG | + | chr2_3:32412951-32412970 | None:intergenic | 45.0% | |
| ! | GGCCACTTTACTTTCACCAT+TGG | - | chr2_3:32412954-32412973 | Msa0288190:intron | 45.0% |
| !! | ACATCGCTGTATTGGTTCGT+AGG | - | chr2_3:32413344-32413363 | Msa0288190:CDS | 45.0% |
| AAGCTGCCACTGAAGAAGTA+CGG | - | chr2_3:32413838-32413857 | Msa0288190:intron | 45.0% | |
| GATATCTCTACATGTCGAGC+TGG | - | chr2_3:32413889-32413908 | Msa0288190:intron | 45.0% | |
| TATCTCTACATGTCGAGCTG+GGG | - | chr2_3:32413891-32413910 | Msa0288190:intron | 45.0% | |
| GACCTAGTTATTCTTGCCAC+GGG | - | chr2_3:32414036-32414055 | Msa0288190:intron | 45.0% | |
| ATCCCGTGGCAAGAATAACT+AGG | + | chr2_3:32414041-32414060 | None:intergenic | 45.0% | |
| TTGGTCACCTTTATATCCCG+TGG | + | chr2_3:32414055-32414074 | None:intergenic | 45.0% | |
| CAACGAATCAGCAGACTCAA+CGG | - | chr2_3:32414119-32414138 | Msa0288190:intron | 45.0% | |
| ACTCAACGGTTCCTATCTAC+AGG | - | chr2_3:32414133-32414152 | Msa0288190:intron | 45.0% | |
| GGAAGAATCCCATTTCGACT+CGG | + | chr2_3:32414252-32414271 | None:intergenic | 45.0% | |
| GGATAAACATGCACGTGAGT+TGG | + | chr2_3:32414474-32414493 | None:intergenic | 45.0% | |
| TCGAGGGTGAATTATTTGCC+TGG | + | chr2_3:32415550-32415569 | None:intergenic | 45.0% | |
| TCACCCTCGAATTCCACAAT+TGG | - | chr2_3:32415560-32415579 | Msa0288190:CDS | 45.0% | |
| CATGCATTACGTGTGGGATA+TGG | - | chr2_3:32415760-32415779 | Msa0288190:CDS | 45.0% | |
| TTGAAATCAGTGGGGCCATA+TGG | + | chr2_3:32415861-32415880 | None:intergenic | 45.0% | |
| !! | TATGGCCCCACTGATTTCAA+TGG | - | chr2_3:32415861-32415880 | Msa0288190:CDS | 45.0% |
| !!! | ATTTTTTCATTTATTTTATA+AGG | + | chr2_3:32412057-32412076 | None:intergenic | 5.0% |
| !! | TATATATTAATAAAAATACA+AGG | + | chr2_3:32413611-32413630 | None:intergenic | 5.0% |
| CATGGCCGGTCCAATATGTT+TGG | - | chr2_3:32412004-32412023 | Msa0288190:intron | 50.0% | |
| GGGGCCAAGCAATCCAAATT+AGG | + | chr2_3:32412213-32412232 | None:intergenic | 50.0% | |
| TGAAAGGGAGGCCGTGTTAT+GGG | + | chr2_3:32412242-32412261 | None:intergenic | 50.0% | |
| ATGAAAGGGAGGCCGTGTTA+TGG | + | chr2_3:32412243-32412262 | None:intergenic | 50.0% | |
| ! | CCTTTTCCAAGGGGGAACTT+AGG | + | chr2_3:32412509-32412528 | None:intergenic | 50.0% |
| CCTAAGTTCCCCCTTGGAAA+AGG | - | chr2_3:32412506-32412525 | Msa0288190:intron | 50.0% | |
| ! | TTTCTGGGCCTTTTCCAAGG+GGG | + | chr2_3:32412517-32412536 | None:intergenic | 50.0% |
| GCCACAAGGCTAAGTAGGAA+TGG | + | chr2_3:32412937-32412956 | None:intergenic | 50.0% | |
| AAGTGGCCACAAGGCTAAGT+AGG | + | chr2_3:32412942-32412961 | None:intergenic | 50.0% | |
| ! | AGCTGCCACTGAAGAAGTAC+GGG | - | chr2_3:32413839-32413858 | Msa0288190:intron | 50.0% |
| ! | TCAATGGCTGGCGCATCTTT+TGG | - | chr2_3:32415638-32415657 | Msa0288190:CDS | 50.0% |
| ACAAAATAAGTGGGGTGGGG+TGG | - | chr2_3:32415977-32415996 | Msa0288190:five_prime_UTR | 50.0% | |
| CAAAATAAGTGGGGTGGGGT+GGG | - | chr2_3:32415978-32415997 | Msa0288190:five_prime_UTR | 50.0% | |
| AAAATAAGTGGGGTGGGGTG+GGG | - | chr2_3:32415979-32415998 | Msa0288190:five_prime_UTR | 50.0% | |
| GGCCGGTCCAATATGTTTGG+AGG | - | chr2_3:32412007-32412026 | Msa0288190:intron | 55.0% | |
| GCCCCAACGAACCCATAACA+CGG | - | chr2_3:32412228-32412247 | Msa0288190:intron | 55.0% | |
| GCCGTGTTATGGGTTCGTTG+GGG | + | chr2_3:32412232-32412251 | None:intergenic | 55.0% | |
| GGCCGTGTTATGGGTTCGTT+GGG | + | chr2_3:32412233-32412252 | None:intergenic | 55.0% | |
| AGGCCGTGTTATGGGTTCGT+TGG | + | chr2_3:32412234-32412253 | None:intergenic | 55.0% | |
| ACCAGCCCGTACTTCTTCAG+TGG | + | chr2_3:32413847-32413866 | None:intergenic | 55.0% | |
| AAATAAGTGGGGTGGGGTGG+GGG | - | chr2_3:32415980-32415999 | Msa0288190:five_prime_UTR | 55.0% | |
| ! | GCCACTGAAGAAGTACGGGC+TGG | - | chr2_3:32413843-32413862 | Msa0288190:intron | 60.0% |
| AATAAGTGGGGTGGGGTGGG+GGG | - | chr2_3:32415981-32416000 | Msa0288190:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 32411243 | 32416068 | 32411243 | ID=Msa0288190;Name=Msa0288190 |
| chr2_3 | mRNA | 32411243 | 32416068 | 32411243 | ID=Msa0288190-mRNA-1;Parent=Msa0288190;Name=Msa0288190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=148|1|1|1|1|1|5|169|519 |
| chr2_3 | exon | 32411243 | 32411760 | 32411243 | ID=Msa0288190-mRNA-1:exon:10841;Parent=Msa0288190-mRNA-1 |
| chr2_3 | exon | 32413157 | 32413515 | 32413157 | ID=Msa0288190-mRNA-1:exon:10840;Parent=Msa0288190-mRNA-1 |
| chr2_3 | exon | 32414336 | 32414511 | 32414336 | ID=Msa0288190-mRNA-1:exon:10839;Parent=Msa0288190-mRNA-1 |
| chr2_3 | exon | 32414628 | 32414865 | 32414628 | ID=Msa0288190-mRNA-1:exon:10838;Parent=Msa0288190-mRNA-1 |
| chr2_3 | exon | 32415483 | 32416068 | 32415483 | ID=Msa0288190-mRNA-1:exon:10837;Parent=Msa0288190-mRNA-1 |
| chr2_3 | five_prime_UTR | 32415921 | 32416068 | 32415921 | ID=Msa0288190-mRNA-1:five_prime_utr;Parent=Msa0288190-mRNA-1 |
| chr2_3 | CDS | 32415483 | 32415920 | 32415483 | ID=Msa0288190-mRNA-1:cds;Parent=Msa0288190-mRNA-1 |
| chr2_3 | CDS | 32414628 | 32414865 | 32414628 | ID=Msa0288190-mRNA-1:cds;Parent=Msa0288190-mRNA-1 |
| chr2_3 | CDS | 32414336 | 32414511 | 32414336 | ID=Msa0288190-mRNA-1:cds;Parent=Msa0288190-mRNA-1 |
| chr2_3 | CDS | 32413157 | 32413515 | 32413157 | ID=Msa0288190-mRNA-1:cds;Parent=Msa0288190-mRNA-1 |
| chr2_3 | CDS | 32411412 | 32411760 | 32411412 | ID=Msa0288190-mRNA-1:cds;Parent=Msa0288190-mRNA-1 |
| chr2_3 | three_prime_UTR | 32411243 | 32411411 | 32411243 | ID=Msa0288190-mRNA-1:three_prime_utr;Parent=Msa0288190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
