AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1084850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084850 MtrunA17_Chr7g0247311 100.000 259 0 0 1 259 1 259 0.0 528
Msa1084850 MtrunA17_Chr5g0405281 95.736 258 11 0 1 258 1 258 0.0 508
Msa1084850 MtrunA17_Chr3g0094604 33.333 186 112 4 29 214 49 222 1.00e-24 99.4
Msa1084850 MtrunA17_CPg0492514 33.333 186 112 4 29 214 49 222 1.06e-24 99.0
Msa1084850 MtrunA17_Chr3g0090924 33.333 186 112 4 29 214 49 222 1.06e-24 99.0
Msa1084850 MtrunA17_Chr4g0015984 33.333 186 112 4 29 214 49 222 1.06e-24 99.0
Msa1084850 MtrunA17_Chr4g0017184 33.333 186 112 4 29 214 56 229 4.70e-24 97.4
Msa1084850 MtrunA17_Chr2g0283311 41.026 117 63 3 98 214 51 161 7.29e-19 82.0
Msa1084850 MtrunA17_Chr4g0024444 29.078 141 93 2 29 169 49 182 4.53e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084850 AT4G36130.1 93.023 258 18 0 1 258 1 258 0.0 498
Msa1084850 AT2G18020.1 92.636 258 19 0 1 258 1 258 4.17e-175 483
Msa1084850 AT3G51190.1 84.519 239 36 1 1 238 1 239 3.59e-153 427
Msa1084850 ATCG01310.1 32.632 190 108 4 29 214 60 233 1.49e-25 102
Msa1084850 ATCG00830.1 32.632 190 108 4 29 214 60 233 1.49e-25 102
Msa1084850 AT2G44065.3 36.691 139 80 3 97 234 58 189 9.45e-17 77.0
Msa1084850 AT2G44065.1 36.691 139 80 3 97 234 58 189 9.45e-17 77.0
Msa1084850 AT2G44065.2 36.691 139 80 3 97 234 58 189 9.45e-17 77.0

Find 118 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTTCTTTGAAATTCT+TGG 0.197598 7_2:-85207622 Msa1084850:three_prime_UTR
ATTTCTCGCCGCCGCTAAAA+TGG 0.206310 7_2:-85209392 Msa1084850:exon
GACACGAATTAATCAATAAA+TGG 0.230920 7_2:+85207643 None:intergenic
CCAAGAGGACTGGTCGTCTT+AGG 0.241658 7_2:-85207926 Msa1084850:CDS
AATCTAAACTGCTTATTTAT+CGG 0.245431 7_2:+85207875 None:intergenic
GTCACTTGGCACAATCTTCT+TGG 0.305373 7_2:+85208184 None:intergenic
GAACTTGTGGTAAGCATTAC+CGG 0.310318 7_2:+85208100 None:intergenic
AGTTTAACAAGAAACAAAAT+TGG 0.311409 7_2:+85207824 None:intergenic
CTTGGTCAGCCCAAGTTTCA+TGG 0.315017 7_2:-85207604 Msa1084850:three_prime_UTR
GTTTATTTACTGCGGTAAAA+AGG 0.324875 7_2:-85209116 Msa1084850:CDS
CTACTGATTTATTATTTGTT+TGG 0.333730 7_2:-85207703 Msa1084850:three_prime_UTR
CCTCCGTGGGGATGCTCAAC+AGG 0.334759 7_2:+85208029 None:intergenic
GCCATGATTGGGCAAGTTGC+TGG 0.355007 7_2:-85208155 Msa1084850:CDS
GAAGTCGAGGGAACGGAAAC+GGG 0.358567 7_2:+85209294 None:intergenic
CAAGAGGACTGGTCGTCTTA+GGG 0.368154 7_2:-85207925 Msa1084850:CDS
AGTGACTGCAGGGCCATGAT+TGG 0.371357 7_2:-85208167 Msa1084850:CDS
GGAAACGGGCGGGGCCTTTG+CGG 0.378068 7_2:+85209308 None:intergenic
TACCTAGAGGTATCATTATC+GGG 0.400292 7_2:+85208953 None:intergenic
GCTCCTTCTGTTTCTGATAA+CGG 0.408848 7_2:+85209173 None:intergenic
ATACCTAGAGGTATCATTAT+CGG 0.410207 7_2:+85208952 None:intergenic
GGCCTTTGCGGTGGTGTGTG+TGG 0.413149 7_2:+85209320 None:intergenic
GCCTTTGCGGTGGTGTGTGT+GGG 0.415084 7_2:+85209321 None:intergenic
TTACAAATCACAGCACCTTC+AGG 0.419108 7_2:+85209052 None:intergenic
GGGAAGTTCTAACCTAGGTT+TGG 0.425376 7_2:+85209436 None:intergenic
AATTATGCAGCCATGAAACT+TGG 0.428439 7_2:+85207594 None:intergenic
GCTGCTGAGGGTTTGTATAC+CGG 0.439273 7_2:-85209142 Msa1084850:CDS
ACCAGCAACTTGCCCAATCA+TGG 0.440792 7_2:+85208154 None:intergenic
TTTCTCGCCGCCGCTAAAAT+GGG 0.440883 7_2:-85209391 Msa1084850:exon
CGAGGGAACGGAAACGGGCG+GGG 0.441434 7_2:+85209299 None:intergenic
AACTGAGAAGCCAATGTTGA+AGG 0.451466 7_2:-85208123 Msa1084850:CDS
CGTCGGTGACGACTCCTTTG+AGG 0.452604 7_2:+85209254 None:intergenic
GGAGGTAATCACCAACATAT+TGG 0.453068 7_2:-85208008 Msa1084850:CDS
TCGAGGGAACGGAAACGGGC+GGG 0.454887 7_2:+85209298 None:intergenic
ATCAATAAATGGCGTGTCAC+CGG 0.455488 7_2:+85207654 None:intergenic
CTCATTGCTGCCAAGAGGAC+TGG 0.455821 7_2:-85207936 Msa1084850:CDS
GTCAGACGTGATGCTCCTCC+TGG 0.456100 7_2:-85207972 Msa1084850:CDS
CGAAGTCGAGGGAACGGAAA+CGG 0.463299 7_2:+85209293 None:intergenic
GCATTACCGGCCTTCAACAT+TGG 0.473847 7_2:+85208113 None:intergenic
TACAGGATCAAGCTTCCATC+TGG 0.475040 7_2:-85208209 Msa1084850:intron
AGATTGTGCCAAGTGACTGC+AGG 0.475752 7_2:-85208178 Msa1084850:CDS
CCTCTTAGATCTATTCCTGA+AGG 0.484222 7_2:-85209067 Msa1084850:CDS
AACTGTTGGCCTAAGGTTCG+TGG 0.487779 7_2:-85208065 Msa1084850:CDS
TGTCATCCGTGCCCAACGTA+AGG 0.492175 7_2:-85209365 Msa1084850:CDS
CGTTTCCGTTCCCTCGACTT+CGG 0.496555 7_2:-85209292 Msa1084850:CDS
TCCCACACACACCACCGCAA+AGG 0.498632 7_2:-85209322 Msa1084850:CDS
GTGACTGCAGGGCCATGATT+GGG 0.501153 7_2:-85208166 Msa1084850:CDS
GATTTATTATTTGTTTGGAA+TGG 0.507577 7_2:-85207698 Msa1084850:three_prime_UTR
GCTCCTCCTGGACAGAAGGT+TGG 0.508354 7_2:-85207960 Msa1084850:CDS
GGAACCTGCTCCCTTACGTT+GGG 0.510705 7_2:+85209354 None:intergenic
CGTGCCCAACGTAAGGGAGC+AGG 0.512987 7_2:-85209358 Msa1084850:CDS
TCCTCTTCACTCTGAACTTG+TGG 0.513229 7_2:+85208087 None:intergenic
CCTAAGACGACCAGTCCTCT+TGG 0.514272 7_2:+85207926 None:intergenic
ATTGGGCAAGTTGCTGGTGG+TGG 0.517875 7_2:-85208149 Msa1084850:CDS
ATGAGACCAACCTTCTGTCC+AGG 0.521573 7_2:+85207954 None:intergenic
AACGGGCGGGGCCTTTGCGG+TGG 0.529015 7_2:+85209311 None:intergenic
ATCATGGCCCTGCAGTCACT+TGG 0.530422 7_2:+85208170 None:intergenic
GCAAGAGGAGCACCACGACC+TGG 0.531863 7_2:+85209220 None:intergenic
TGCTGTGATTTGTAATGTTG+AGG 0.534385 7_2:-85209044 Msa1084850:CDS
ACCGACGTCATCCACGATCC+AGG 0.536026 7_2:-85209238 Msa1084850:CDS
AGCATCACGTCTGACAGTAC+TGG 0.537912 7_2:+85207980 None:intergenic
TTGGTGATTACCTCCTCCGT+GGG 0.541006 7_2:+85208016 None:intergenic
GTTGAGCATCCCCACGGAGG+AGG 0.543276 7_2:-85208026 Msa1084850:CDS
GTCATCCACGATCCAGGTCG+TGG 0.543374 7_2:-85209232 Msa1084850:CDS
AATAAATCAGTAGGCAGTGA+AGG 0.544552 7_2:+85207713 None:intergenic
CGTTGCGTTCGCCGAAGTCG+AGG 0.545445 7_2:+85209281 None:intergenic
GAAGAGGAACTGTTGGCCTA+AGG 0.546745 7_2:-85208072 Msa1084850:CDS
TCAGTAGGCAGTGAAGGTGC+AGG 0.548307 7_2:+85207719 None:intergenic
TGTAATGTTGAGGGTCATGT+TGG 0.553570 7_2:-85209034 Msa1084850:CDS
CAAACAAATAATAAATCAGT+AGG 0.555872 7_2:+85207704 None:intergenic
TCGTGGTGCTCCTCTTGCTA+AGG 0.557816 7_2:-85209215 Msa1084850:CDS
ATGATTGGGCAAGTTGCTGG+TGG 0.561494 7_2:-85208152 Msa1084850:CDS
CTTCTGTTTCTGATAACGGA+AGG 0.563357 7_2:+85209177 None:intergenic
TGATGCTCCTCCTGGACAGA+AGG 0.566122 7_2:-85207964 Msa1084850:CDS
CGGAACCTGCTCCCTTACGT+TGG 0.568166 7_2:+85209353 None:intergenic
TCTGATAACGGAAGGGATGA+CGG 0.568851 7_2:+85209185 None:intergenic
GCTGTGATTTGTAATGTTGA+GGG 0.572615 7_2:-85209043 Msa1084850:CDS
TTCTGTTTCTGATAACGGAA+GGG 0.573577 7_2:+85209178 None:intergenic
GAACGCAACGGTTACCTCAA+AGG 0.574638 7_2:-85209268 Msa1084850:CDS
GTCGAGGGAACGGAAACGGG+CGG 0.575776 7_2:+85209297 None:intergenic
GTTCGCCGAAGTCGAGGGAA+CGG 0.578749 7_2:+85209287 None:intergenic
CTGCTCCCTTACGTTGGGCA+CGG 0.579845 7_2:+85209359 None:intergenic
GAGAAGCCAATGTTGAAGGC+CGG 0.581735 7_2:-85208119 Msa1084850:CDS
TCAGAGTGAAGAGGAACTGT+TGG 0.582492 7_2:-85208079 Msa1084850:CDS
GTCATCCGTGCCCAACGTAA+GGG 0.585900 7_2:-85209364 Msa1084850:CDS
GTGTGTGTGGGATTTGAAAA+CGG 0.586676 7_2:+85209333 None:intergenic
CCTTCAGGAATAGATCTAAG+AGG 0.588316 7_2:+85209067 None:intergenic
ACCGCAGTAAATAAACTGAC+CGG 0.589138 7_2:+85209123 None:intergenic
GAGCACCACGACCTGGATCG+TGG 0.593947 7_2:+85209227 None:intergenic
ATAGCAACACCACGAACCTT+AGG 0.594313 7_2:+85208056 None:intergenic
CGGCGGCGAGAAATGGAGAA+GGG 0.594510 7_2:+85209401 None:intergenic
ACCGGTCAGTTTATTTACTG+CGG 0.597635 7_2:-85209124 Msa1084850:CDS
ACAATCTTCTTGGCACCAGA+TGG 0.597976 7_2:+85208194 None:intergenic
GATTGTGCCAAGTGACTGCA+GGG 0.598947 7_2:-85208177 Msa1084850:CDS
GGAATGGGAAGTTCTAACCT+AGG 0.608353 7_2:+85209431 None:intergenic
CTCGACTTCGGCGAACGCAA+CGG 0.608500 7_2:-85209280 Msa1084850:CDS
ATTATGCAGCCATGAAACTT+GGG 0.612152 7_2:+85207595 None:intergenic
GTTGCGTTCGCCGAAGTCGA+GGG 0.613842 7_2:+85209282 None:intergenic
AAGAGGACTGGTCGTCTTAG+GGG 0.622786 7_2:-85207924 Msa1084850:CDS
CGGAAAGTCACCTTAGCAAG+AGG 0.624941 7_2:+85209205 None:intergenic
GCGGCGGCGAGAAATGGAGA+AGG 0.628013 7_2:+85209400 None:intergenic
GTTGGTGATTACCTCCTCCG+TGG 0.630355 7_2:+85208015 None:intergenic
GGCGGCGAGAAATGGAGAAG+GGG 0.633246 7_2:+85209402 None:intergenic
ACCCCGATAATGATACCTCT+AGG 0.637049 7_2:-85208955 Msa1084850:intron
TAGGCAGTGAAGGTGCAGGA+AGG 0.644559 7_2:+85207723 None:intergenic
TTGGTCTCATTGCTGCCAAG+AGG 0.653221 7_2:-85207941 Msa1084850:CDS
TACTGGCATGACCAATATGT+TGG 0.654768 7_2:+85207997 None:intergenic
ACCACAAGTTCAGAGTGAAG+AGG 0.655234 7_2:-85208088 Msa1084850:CDS
GCGGCGAGAAATGGAGAAGG+GGG 0.655589 7_2:+85209403 None:intergenic
AATCCTGTTGAGCATCCCCA+CGG 0.655918 7_2:-85208032 Msa1084850:CDS
ACCTAGAGGTATCATTATCG+GGG 0.665372 7_2:+85208954 None:intergenic
CTTCCGTTATCAGAAACAGA+AGG 0.665450 7_2:-85209176 Msa1084850:CDS
GCAAAACATTACCAACAACA+AGG 0.667504 7_2:+85209089 None:intergenic
GAGGGTCATGTTGGTGACCG+TGG 0.688077 7_2:-85209025 Msa1084850:CDS
AGACCAACCTTCTGTCCAGG+AGG 0.695738 7_2:+85207957 None:intergenic
CAAAACATTACCAACAACAA+GGG 0.700199 7_2:+85209090 None:intergenic
ACCTGGATCGTGGATGACGT+CGG 0.724990 7_2:+85209237 None:intergenic
CCTGTTGAGCATCCCCACGG+AGG 0.744930 7_2:-85208029 Msa1084850:CDS
TGGTGATTACCTCCTCCGTG+GGG 0.779827 7_2:+85208017 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTGATGTTATTTTTAA+TGG - chr7_2:85208135-85208154 Msa1084850:CDS 10.0%
!!! AAATTTTTAATCAGATTTTA+AGG + chr7_2:85208602-85208621 None:intergenic 10.0%
!!! TTAAAAATTTATACCTTTTT+TGG - chr7_2:85208612-85208631 Msa1084850:intron 10.0%
!! TTTCGATTAATATTAATTTA+AGG - chr7_2:85208708-85208727 Msa1084850:intron 10.0%
!!! CAATATAATACTTTTTTATT+AGG - chr7_2:85208743-85208762 Msa1084850:intron 10.0%
!!! TTATTTGATGTTATTTTTAA+TGG - chr7_2:85208135-85208154 Msa1084850:CDS 10.0%
!!! AAATTTTTAATCAGATTTTA+AGG + chr7_2:85208602-85208621 None:intergenic 10.0%
!!! TTAAAAATTTATACCTTTTT+TGG - chr7_2:85208612-85208631 Msa1084850:intron 10.0%
!! TTTCGATTAATATTAATTTA+AGG - chr7_2:85208708-85208727 Msa1084850:intron 10.0%
!!! CAATATAATACTTTTTTATT+AGG - chr7_2:85208743-85208762 Msa1084850:intron 10.0%
!!! GTTTGATTATATTATGATTT+TGG - chr7_2:85208159-85208178 Msa1084850:CDS 15.0%
!!! TATGATTTTGGAATTAAATT+TGG - chr7_2:85208171-85208190 Msa1084850:CDS 15.0%
!!! TTATATTTTTGGATTGATTT+TGG - chr7_2:85208347-85208366 Msa1084850:intron 15.0%
!!! AAATTTGTTTTGTAAATTCA+TGG - chr7_2:85208491-85208510 Msa1084850:intron 15.0%
!!! TATCATTTAAAATCCAAAAA+AGG + chr7_2:85208628-85208647 None:intergenic 15.0%
!!! ATCATTTTCCTAAAATATTA+TGG - chr7_2:85209255-85209274 Msa1084850:CDS 15.0%
!!! GTTTGATTATATTATGATTT+TGG - chr7_2:85208159-85208178 Msa1084850:CDS 15.0%
!!! TATGATTTTGGAATTAAATT+TGG - chr7_2:85208171-85208190 Msa1084850:CDS 15.0%
!!! TTATATTTTTGGATTGATTT+TGG - chr7_2:85208347-85208366 Msa1084850:intron 15.0%
!!! AAATTTGTTTTGTAAATTCA+TGG - chr7_2:85208491-85208510 Msa1084850:intron 15.0%
!!! TATCATTTAAAATCCAAAAA+AGG + chr7_2:85208628-85208647 None:intergenic 15.0%
!!! ATCATTTTCCTAAAATATTA+TGG - chr7_2:85209255-85209274 Msa1084850:CDS 15.0%
!! AAGAATAAAAATATACCTAG+AGG + chr7_2:85208102-85208121 None:intergenic 20.0%
!! AATTAAATTTGGTATTTGAG+TGG - chr7_2:85208182-85208201 Msa1084850:CDS 20.0%
!! TTCAATAGAAATATTTGATC+TGG - chr7_2:85208214-85208233 Msa1084850:intron 20.0%
!! TCAATAGAAATATTTGATCT+GGG - chr7_2:85208215-85208234 Msa1084850:intron 20.0%
!!! GTATTTTTAGTAGATTGAAT+TGG - chr7_2:85208369-85208388 Msa1084850:intron 20.0%
!!! AAAATACTCTGAAAACTAAT+TGG + chr7_2:85208656-85208675 None:intergenic 20.0%
!! AATCTAAACTGCTTATTTAT+CGG + chr7_2:85209167-85209186 None:intergenic 20.0%
!! AGTTTAACAAGAAACAAAAT+TGG + chr7_2:85209218-85209237 None:intergenic 20.0%
!! CAAACAAATAATAAATCAGT+AGG + chr7_2:85209338-85209357 None:intergenic 20.0%
!!! CTACTGATTTATTATTTGTT+TGG - chr7_2:85209336-85209355 Msa1084850:CDS 20.0%
!! GATTTATTATTTGTTTGGAA+TGG - chr7_2:85209341-85209360 Msa1084850:CDS 20.0%
!!! AAATTGCTTTTATTTACAAC+CGG - chr7_2:85209366-85209385 Msa1084850:CDS 20.0%
!!! TCAAATTTCTTTGAAATTCT+TGG - chr7_2:85209417-85209436 Msa1084850:five_prime_UTR 20.0%
!! AAGAATAAAAATATACCTAG+AGG + chr7_2:85208102-85208121 None:intergenic 20.0%
!! AATTAAATTTGGTATTTGAG+TGG - chr7_2:85208182-85208201 Msa1084850:CDS 20.0%
!! TTCAATAGAAATATTTGATC+TGG - chr7_2:85208214-85208233 Msa1084850:intron 20.0%
!! TCAATAGAAATATTTGATCT+GGG - chr7_2:85208215-85208234 Msa1084850:intron 20.0%
!!! GTATTTTTAGTAGATTGAAT+TGG - chr7_2:85208369-85208388 Msa1084850:intron 20.0%
!!! AAAATACTCTGAAAACTAAT+TGG + chr7_2:85208656-85208675 None:intergenic 20.0%
!! AATCTAAACTGCTTATTTAT+CGG + chr7_2:85209167-85209186 None:intergenic 20.0%
!! AGTTTAACAAGAAACAAAAT+TGG + chr7_2:85209218-85209237 None:intergenic 20.0%
!! CAAACAAATAATAAATCAGT+AGG + chr7_2:85209338-85209357 None:intergenic 20.0%
!!! CTACTGATTTATTATTTGTT+TGG - chr7_2:85209336-85209355 Msa1084850:CDS 20.0%
!! GATTTATTATTTGTTTGGAA+TGG - chr7_2:85209341-85209360 Msa1084850:CDS 20.0%
!!! AAATTGCTTTTATTTACAAC+CGG - chr7_2:85209366-85209385 Msa1084850:CDS 20.0%
!!! TCAAATTTCTTTGAAATTCT+TGG - chr7_2:85209417-85209436 Msa1084850:five_prime_UTR 20.0%
!! GAATTGATGTTAGTGTTTTT+CGG - chr7_2:85208303-85208322 Msa1084850:intron 25.0%
!!! CAAATTTGATTTGTTTAAGC+TGG - chr7_2:85208419-85208438 Msa1084850:intron 25.0%
! TAGCACAATATAAACAAATC+GGG + chr7_2:85208545-85208564 None:intergenic 25.0%
! CTAGCACAATATAAACAAAT+CGG + chr7_2:85208546-85208565 None:intergenic 25.0%
! TTGATTTCAATGCAGAAAAT+TGG - chr7_2:85208570-85208589 Msa1084850:intron 25.0%
! TGATTTCAATGCAGAAAATT+GGG - chr7_2:85208571-85208590 Msa1084850:intron 25.0%
!!! AGGGTTTTGTTTGATTATTT+AGG - chr7_2:85208763-85208782 Msa1084850:intron 25.0%
! TTTAGGTGTATACTTGATTT+AGG - chr7_2:85208780-85208799 Msa1084850:intron 25.0%
!!! TGAAATGAGTTTTGTTATAC+AGG - chr7_2:85208813-85208832 Msa1084850:intron 25.0%
!! CAAAAGCTCCATAATATTTT+AGG + chr7_2:85209266-85209285 None:intergenic 25.0%
! GACACGAATTAATCAATAAA+TGG + chr7_2:85209399-85209418 None:intergenic 25.0%
!! GAATTGATGTTAGTGTTTTT+CGG - chr7_2:85208303-85208322 Msa1084850:intron 25.0%
!!! CAAATTTGATTTGTTTAAGC+TGG - chr7_2:85208419-85208438 Msa1084850:intron 25.0%
! TAGCACAATATAAACAAATC+GGG + chr7_2:85208545-85208564 None:intergenic 25.0%
! CTAGCACAATATAAACAAAT+CGG + chr7_2:85208546-85208565 None:intergenic 25.0%
! TTGATTTCAATGCAGAAAAT+TGG - chr7_2:85208570-85208589 Msa1084850:intron 25.0%
! TGATTTCAATGCAGAAAATT+GGG - chr7_2:85208571-85208590 Msa1084850:intron 25.0%
!!! AGGGTTTTGTTTGATTATTT+AGG - chr7_2:85208763-85208782 Msa1084850:intron 25.0%
! TTTAGGTGTATACTTGATTT+AGG - chr7_2:85208780-85208799 Msa1084850:intron 25.0%
!!! TGAAATGAGTTTTGTTATAC+AGG - chr7_2:85208813-85208832 Msa1084850:intron 25.0%
!! CAAAAGCTCCATAATATTTT+AGG + chr7_2:85209266-85209285 None:intergenic 25.0%
! GACACGAATTAATCAATAAA+TGG + chr7_2:85209399-85209418 None:intergenic 25.0%
GTTTATTTACTGCGGTAAAA+AGG - chr7_2:85207923-85207942 Msa1084850:CDS 30.0%
CAAAACATTACCAACAACAA+GGG + chr7_2:85207952-85207971 None:intergenic 30.0%
!! ATACCTAGAGGTATCATTAT+CGG + chr7_2:85208090-85208109 None:intergenic 30.0%
!! ATGTTAGTGTTTTTCGGTTA+TGG - chr7_2:85208309-85208328 Msa1084850:intron 30.0%
TAGATTGAATTGGAATTGAG+TGG - chr7_2:85208379-85208398 Msa1084850:intron 30.0%
AGATTGAATTGGAATTGAGT+GGG - chr7_2:85208380-85208399 Msa1084850:intron 30.0%
! ATACTCTGAAAACTAATTGG+AGG + chr7_2:85208653-85208672 None:intergenic 30.0%
GTTTATTTACTGCGGTAAAA+AGG - chr7_2:85207923-85207942 Msa1084850:CDS 30.0%
CAAAACATTACCAACAACAA+GGG + chr7_2:85207952-85207971 None:intergenic 30.0%
!! ATACCTAGAGGTATCATTAT+CGG + chr7_2:85208090-85208109 None:intergenic 30.0%
!! ATGTTAGTGTTTTTCGGTTA+TGG - chr7_2:85208309-85208328 Msa1084850:intron 30.0%
TAGATTGAATTGGAATTGAG+TGG - chr7_2:85208379-85208398 Msa1084850:intron 30.0%
AGATTGAATTGGAATTGAGT+GGG - chr7_2:85208380-85208399 Msa1084850:intron 30.0%
! ATACTCTGAAAACTAATTGG+AGG + chr7_2:85208653-85208672 None:intergenic 30.0%
!! TTCTGTTTCTGATAACGGAA+GGG + chr7_2:85207864-85207883 None:intergenic 35.0%
GCAAAACATTACCAACAACA+AGG + chr7_2:85207953-85207972 None:intergenic 35.0%
! TGCTGTGATTTGTAATGTTG+AGG - chr7_2:85207995-85208014 Msa1084850:CDS 35.0%
! GCTGTGATTTGTAATGTTGA+GGG - chr7_2:85207996-85208015 Msa1084850:CDS 35.0%
!! TACCTAGAGGTATCATTATC+GGG + chr7_2:85208089-85208108 None:intergenic 35.0%
ATCGGGTTCAAAATTCATCT+TGG + chr7_2:85208528-85208547 None:intergenic 35.0%
TGAAGTGAAGTCATGGATAT+AGG - chr7_2:85208683-85208702 Msa1084850:intron 35.0%
AATAAATCAGTAGGCAGTGA+AGG + chr7_2:85209329-85209348 None:intergenic 35.0%
!! TTCTGTTTCTGATAACGGAA+GGG + chr7_2:85207864-85207883 None:intergenic 35.0%
GCAAAACATTACCAACAACA+AGG + chr7_2:85207953-85207972 None:intergenic 35.0%
! TGCTGTGATTTGTAATGTTG+AGG - chr7_2:85207995-85208014 Msa1084850:CDS 35.0%
! GCTGTGATTTGTAATGTTGA+GGG - chr7_2:85207996-85208015 Msa1084850:CDS 35.0%
!! TACCTAGAGGTATCATTATC+GGG + chr7_2:85208089-85208108 None:intergenic 35.0%
ATCGGGTTCAAAATTCATCT+TGG + chr7_2:85208528-85208547 None:intergenic 35.0%
TGAAGTGAAGTCATGGATAT+AGG - chr7_2:85208683-85208702 Msa1084850:intron 35.0%
AATAAATCAGTAGGCAGTGA+AGG + chr7_2:85209329-85209348 None:intergenic 35.0%
GTGTGTGTGGGATTTGAAAA+CGG + chr7_2:85207709-85207728 None:intergenic 40.0%
!! CTTCTGTTTCTGATAACGGA+AGG + chr7_2:85207865-85207884 None:intergenic 40.0%
CTTCCGTTATCAGAAACAGA+AGG - chr7_2:85207863-85207882 Msa1084850:three_prime_UTR 40.0%
!! GCTCCTTCTGTTTCTGATAA+CGG + chr7_2:85207869-85207888 None:intergenic 40.0%
ACCGGTCAGTTTATTTACTG+CGG - chr7_2:85207915-85207934 Msa1084850:CDS 40.0%
ACCGCAGTAAATAAACTGAC+CGG + chr7_2:85207919-85207938 None:intergenic 40.0%
! AAAAAGGCTACCCTTGTTGT+TGG - chr7_2:85207939-85207958 Msa1084850:CDS 40.0%
CCTTCAGGAATAGATCTAAG+AGG + chr7_2:85207975-85207994 None:intergenic 40.0%
CCTCTTAGATCTATTCCTGA+AGG - chr7_2:85207972-85207991 Msa1084850:CDS 40.0%
TTACAAATCACAGCACCTTC+AGG + chr7_2:85207990-85208009 None:intergenic 40.0%
TGTAATGTTGAGGGTCATGT+TGG - chr7_2:85208005-85208024 Msa1084850:CDS 40.0%
! AAGCTCTAGCAAAAACACCA+CGG + chr7_2:85208034-85208053 None:intergenic 40.0%
!! ACCTAGAGGTATCATTATCG+GGG + chr7_2:85208088-85208107 None:intergenic 40.0%
TCATGACTGAAGTGAAGTCA+TGG - chr7_2:85208676-85208695 Msa1084850:intron 40.0%
AACTGAGAAGCCAATGTTGA+AGG - chr7_2:85208916-85208935 Msa1084850:intron 40.0%
GAACTTGTGGTAAGCATTAC+CGG + chr7_2:85208942-85208961 None:intergenic 40.0%
GGAGGTAATCACCAACATAT+TGG - chr7_2:85209031-85209050 Msa1084850:CDS 40.0%
TACTGGCATGACCAATATGT+TGG + chr7_2:85209045-85209064 None:intergenic 40.0%
ATCAATAAATGGCGTGTCAC+CGG + chr7_2:85209388-85209407 None:intergenic 40.0%
GTGTGTGTGGGATTTGAAAA+CGG + chr7_2:85207709-85207728 None:intergenic 40.0%
!! CTTCTGTTTCTGATAACGGA+AGG + chr7_2:85207865-85207884 None:intergenic 40.0%
CTTCCGTTATCAGAAACAGA+AGG - chr7_2:85207863-85207882 Msa1084850:three_prime_UTR 40.0%
!! GCTCCTTCTGTTTCTGATAA+CGG + chr7_2:85207869-85207888 None:intergenic 40.0%
ACCGGTCAGTTTATTTACTG+CGG - chr7_2:85207915-85207934 Msa1084850:CDS 40.0%
ACCGCAGTAAATAAACTGAC+CGG + chr7_2:85207919-85207938 None:intergenic 40.0%
! AAAAAGGCTACCCTTGTTGT+TGG - chr7_2:85207939-85207958 Msa1084850:CDS 40.0%
CCTTCAGGAATAGATCTAAG+AGG + chr7_2:85207975-85207994 None:intergenic 40.0%
CCTCTTAGATCTATTCCTGA+AGG - chr7_2:85207972-85207991 Msa1084850:CDS 40.0%
TTACAAATCACAGCACCTTC+AGG + chr7_2:85207990-85208009 None:intergenic 40.0%
TGTAATGTTGAGGGTCATGT+TGG - chr7_2:85208005-85208024 Msa1084850:CDS 40.0%
! AAGCTCTAGCAAAAACACCA+CGG + chr7_2:85208034-85208053 None:intergenic 40.0%
!! ACCTAGAGGTATCATTATCG+GGG + chr7_2:85208088-85208107 None:intergenic 40.0%
TCATGACTGAAGTGAAGTCA+TGG - chr7_2:85208676-85208695 Msa1084850:intron 40.0%
AACTGAGAAGCCAATGTTGA+AGG - chr7_2:85208916-85208935 Msa1084850:intron 40.0%
GAACTTGTGGTAAGCATTAC+CGG + chr7_2:85208942-85208961 None:intergenic 40.0%
GGAGGTAATCACCAACATAT+TGG - chr7_2:85209031-85209050 Msa1084850:CDS 40.0%
TACTGGCATGACCAATATGT+TGG + chr7_2:85209045-85209064 None:intergenic 40.0%
ATCAATAAATGGCGTGTCAC+CGG + chr7_2:85209388-85209407 None:intergenic 40.0%
! GGGAAGTTCTAACCTAGGTT+TGG + chr7_2:85207606-85207625 None:intergenic 45.0%
! GGAATGGGAAGTTCTAACCT+AGG + chr7_2:85207611-85207630 None:intergenic 45.0%
! GATGACACGACCCATTTTAG+CGG + chr7_2:85207661-85207680 None:intergenic 45.0%
!! TCTGATAACGGAAGGGATGA+CGG + chr7_2:85207857-85207876 None:intergenic 45.0%
!! GGTGTTTTTGCTAGAGCTTC+TGG - chr7_2:85208035-85208054 Msa1084850:CDS 45.0%
ACCCCGATAATGATACCTCT+AGG - chr7_2:85208084-85208103 Msa1084850:CDS 45.0%
TACAGGATCAAGCTTCCATC+TGG - chr7_2:85208830-85208849 Msa1084850:intron 45.0%
ACAATCTTCTTGGCACCAGA+TGG + chr7_2:85208848-85208867 None:intergenic 45.0%
GTCACTTGGCACAATCTTCT+TGG + chr7_2:85208858-85208877 None:intergenic 45.0%
ACCACAAGTTCAGAGTGAAG+AGG - chr7_2:85208951-85208970 Msa1084850:intron 45.0%
TCCTCTTCACTCTGAACTTG+TGG + chr7_2:85208955-85208974 None:intergenic 45.0%
TCAGAGTGAAGAGGAACTGT+TGG - chr7_2:85208960-85208979 Msa1084850:CDS 45.0%
ATAGCAACACCACGAACCTT+AGG + chr7_2:85208986-85209005 None:intergenic 45.0%
! GGGAAGTTCTAACCTAGGTT+TGG + chr7_2:85207606-85207625 None:intergenic 45.0%
! GGAATGGGAAGTTCTAACCT+AGG + chr7_2:85207611-85207630 None:intergenic 45.0%
! GATGACACGACCCATTTTAG+CGG + chr7_2:85207661-85207680 None:intergenic 45.0%
!! TCTGATAACGGAAGGGATGA+CGG + chr7_2:85207857-85207876 None:intergenic 45.0%
!! GGTGTTTTTGCTAGAGCTTC+TGG - chr7_2:85208035-85208054 Msa1084850:CDS 45.0%
ACCCCGATAATGATACCTCT+AGG - chr7_2:85208084-85208103 Msa1084850:CDS 45.0%
TACAGGATCAAGCTTCCATC+TGG - chr7_2:85208830-85208849 Msa1084850:intron 45.0%
ACAATCTTCTTGGCACCAGA+TGG + chr7_2:85208848-85208867 None:intergenic 45.0%
GTCACTTGGCACAATCTTCT+TGG + chr7_2:85208858-85208877 None:intergenic 45.0%
ACCACAAGTTCAGAGTGAAG+AGG - chr7_2:85208951-85208970 Msa1084850:intron 45.0%
TCCTCTTCACTCTGAACTTG+TGG + chr7_2:85208955-85208974 None:intergenic 45.0%
TCAGAGTGAAGAGGAACTGT+TGG - chr7_2:85208960-85208979 Msa1084850:CDS 45.0%
ATAGCAACACCACGAACCTT+AGG + chr7_2:85208986-85209005 None:intergenic 45.0%
!!! TTATTATTTGATTATATTTT+TGG - chr7_2:85208336-85208355 Msa1084850:intron 5.0%
!!! AATATAATACTTTTTTATTA+GGG - chr7_2:85208744-85208763 Msa1084850:intron 5.0%
!!! TTATTATTTGATTATATTTT+TGG - chr7_2:85208336-85208355 Msa1084850:intron 5.0%
!!! AATATAATACTTTTTTATTA+GGG - chr7_2:85208744-85208763 Msa1084850:intron 5.0%
!! ATTTTAGCGGCGGCGAGAAA+TGG + chr7_2:85207648-85207667 None:intergenic 50.0%
ATTTCTCGCCGCCGCTAAAA+TGG - chr7_2:85207647-85207666 Msa1084850:three_prime_UTR 50.0%
TTTCTCGCCGCCGCTAAAAT+GGG - chr7_2:85207648-85207667 Msa1084850:three_prime_UTR 50.0%
GAACGCAACGGTTACCTCAA+AGG - chr7_2:85207771-85207790 Msa1084850:three_prime_UTR 50.0%
CGGAAAGTCACCTTAGCAAG+AGG + chr7_2:85207837-85207856 None:intergenic 50.0%
! GAGCTTTTCGTTGCTGCTGA+GGG - chr7_2:85207885-85207904 Msa1084850:exon 50.0%
GCTGCTGAGGGTTTGTATAC+CGG - chr7_2:85207897-85207916 Msa1084850:CDS 50.0%
AGATTGTGCCAAGTGACTGC+AGG - chr7_2:85208861-85208880 Msa1084850:intron 50.0%
GATTGTGCCAAGTGACTGCA+GGG - chr7_2:85208862-85208881 Msa1084850:intron 50.0%
ACCAGCAACTTGCCCAATCA+TGG + chr7_2:85208888-85208907 None:intergenic 50.0%
ATGATTGGGCAAGTTGCTGG+TGG - chr7_2:85208887-85208906 Msa1084850:intron 50.0%
GAGAAGCCAATGTTGAAGGC+CGG - chr7_2:85208920-85208939 Msa1084850:intron 50.0%
GCATTACCGGCCTTCAACAT+TGG + chr7_2:85208929-85208948 None:intergenic 50.0%
! GAAGAGGAACTGTTGGCCTA+AGG - chr7_2:85208967-85208986 Msa1084850:CDS 50.0%
! AACTGTTGGCCTAAGGTTCG+TGG - chr7_2:85208974-85208993 Msa1084850:CDS 50.0%
AATCCTGTTGAGCATCCCCA+CGG - chr7_2:85209007-85209026 Msa1084850:CDS 50.0%
! TTGGTGATTACCTCCTCCGT+GGG + chr7_2:85209026-85209045 None:intergenic 50.0%
AGCATCACGTCTGACAGTAC+TGG + chr7_2:85209062-85209081 None:intergenic 50.0%
ATGAGACCAACCTTCTGTCC+AGG + chr7_2:85209088-85209107 None:intergenic 50.0%
TTGGTCTCATTGCTGCCAAG+AGG - chr7_2:85209098-85209117 Msa1084850:CDS 50.0%
!! CAAGAGGACTGGTCGTCTTA+GGG - chr7_2:85209114-85209133 Msa1084850:CDS 50.0%
!! AAGAGGACTGGTCGTCTTAG+GGG - chr7_2:85209115-85209134 Msa1084850:CDS 50.0%
CTTGGTCAGCCCAAGTTTCA+TGG - chr7_2:85209435-85209454 Msa1084850:five_prime_UTR 50.0%
!! ATTTTAGCGGCGGCGAGAAA+TGG + chr7_2:85207648-85207667 None:intergenic 50.0%
ATTTCTCGCCGCCGCTAAAA+TGG - chr7_2:85207647-85207666 Msa1084850:three_prime_UTR 50.0%
TTTCTCGCCGCCGCTAAAAT+GGG - chr7_2:85207648-85207667 Msa1084850:three_prime_UTR 50.0%
GAACGCAACGGTTACCTCAA+AGG - chr7_2:85207771-85207790 Msa1084850:three_prime_UTR 50.0%
CGGAAAGTCACCTTAGCAAG+AGG + chr7_2:85207837-85207856 None:intergenic 50.0%
! GAGCTTTTCGTTGCTGCTGA+GGG - chr7_2:85207885-85207904 Msa1084850:exon 50.0%
GCTGCTGAGGGTTTGTATAC+CGG - chr7_2:85207897-85207916 Msa1084850:CDS 50.0%
AGATTGTGCCAAGTGACTGC+AGG - chr7_2:85208861-85208880 Msa1084850:intron 50.0%
GATTGTGCCAAGTGACTGCA+GGG - chr7_2:85208862-85208881 Msa1084850:intron 50.0%
ACCAGCAACTTGCCCAATCA+TGG + chr7_2:85208888-85208907 None:intergenic 50.0%
ATGATTGGGCAAGTTGCTGG+TGG - chr7_2:85208887-85208906 Msa1084850:intron 50.0%
GAGAAGCCAATGTTGAAGGC+CGG - chr7_2:85208920-85208939 Msa1084850:intron 50.0%
GCATTACCGGCCTTCAACAT+TGG + chr7_2:85208929-85208948 None:intergenic 50.0%
! GAAGAGGAACTGTTGGCCTA+AGG - chr7_2:85208967-85208986 Msa1084850:CDS 50.0%
! AACTGTTGGCCTAAGGTTCG+TGG - chr7_2:85208974-85208993 Msa1084850:CDS 50.0%
AATCCTGTTGAGCATCCCCA+CGG - chr7_2:85209007-85209026 Msa1084850:CDS 50.0%
! TTGGTGATTACCTCCTCCGT+GGG + chr7_2:85209026-85209045 None:intergenic 50.0%
AGCATCACGTCTGACAGTAC+TGG + chr7_2:85209062-85209081 None:intergenic 50.0%
ATGAGACCAACCTTCTGTCC+AGG + chr7_2:85209088-85209107 None:intergenic 50.0%
TTGGTCTCATTGCTGCCAAG+AGG - chr7_2:85209098-85209117 Msa1084850:CDS 50.0%
!! CAAGAGGACTGGTCGTCTTA+GGG - chr7_2:85209114-85209133 Msa1084850:CDS 50.0%
!! AAGAGGACTGGTCGTCTTAG+GGG - chr7_2:85209115-85209134 Msa1084850:CDS 50.0%
CTTGGTCAGCCCAAGTTTCA+TGG - chr7_2:85209435-85209454 Msa1084850:five_prime_UTR 50.0%
GAGAAGGGGGAGTGAGGAAT+GGG + chr7_2:85207626-85207645 None:intergenic 55.0%
GAAATGGAGAAGGGGGAGTG+AGG + chr7_2:85207632-85207651 None:intergenic 55.0%
!! GACACGACCCATTTTAGCGG+CGG + chr7_2:85207658-85207677 None:intergenic 55.0%
TGTCATCCGTGCCCAACGTA+AGG - chr7_2:85207674-85207693 Msa1084850:three_prime_UTR 55.0%
GTCATCCGTGCCCAACGTAA+GGG - chr7_2:85207675-85207694 Msa1084850:three_prime_UTR 55.0%
GGAACCTGCTCCCTTACGTT+GGG + chr7_2:85207688-85207707 None:intergenic 55.0%
GAAGTCGAGGGAACGGAAAC+GGG + chr7_2:85207748-85207767 None:intergenic 55.0%
CGAAGTCGAGGGAACGGAAA+CGG + chr7_2:85207749-85207768 None:intergenic 55.0%
CGTTTCCGTTCCCTCGACTT+CGG - chr7_2:85207747-85207766 Msa1084850:three_prime_UTR 55.0%
ACCTGGATCGTGGATGACGT+CGG + chr7_2:85207805-85207824 None:intergenic 55.0%
TCGTGGTGCTCCTCTTGCTA+AGG - chr7_2:85207824-85207843 Msa1084850:three_prime_UTR 55.0%
! GGAGCTTTTCGTTGCTGCTG+AGG - chr7_2:85207884-85207903 Msa1084850:exon 55.0%
ATCATGGCCCTGCAGTCACT+TGG + chr7_2:85208872-85208891 None:intergenic 55.0%
AGTGACTGCAGGGCCATGAT+TGG - chr7_2:85208872-85208891 Msa1084850:intron 55.0%
GTGACTGCAGGGCCATGATT+GGG - chr7_2:85208873-85208892 Msa1084850:intron 55.0%
GCCATGATTGGGCAAGTTGC+TGG - chr7_2:85208884-85208903 Msa1084850:intron 55.0%
ATTGGGCAAGTTGCTGGTGG+TGG - chr7_2:85208890-85208909 Msa1084850:intron 55.0%
TGGTGATTACCTCCTCCGTG+GGG + chr7_2:85209025-85209044 None:intergenic 55.0%
!! GTTGGTGATTACCTCCTCCG+TGG + chr7_2:85209027-85209046 None:intergenic 55.0%
TGATGCTCCTCCTGGACAGA+AGG - chr7_2:85209075-85209094 Msa1084850:CDS 55.0%
AGACCAACCTTCTGTCCAGG+AGG + chr7_2:85209085-85209104 None:intergenic 55.0%
CTCATTGCTGCCAAGAGGAC+TGG - chr7_2:85209103-85209122 Msa1084850:CDS 55.0%
CCTAAGACGACCAGTCCTCT+TGG + chr7_2:85209116-85209135 None:intergenic 55.0%
!! CCAAGAGGACTGGTCGTCTT+AGG - chr7_2:85209113-85209132 Msa1084850:CDS 55.0%
! TAGGCAGTGAAGGTGCAGGA+AGG + chr7_2:85209319-85209338 None:intergenic 55.0%
! TCAGTAGGCAGTGAAGGTGC+AGG + chr7_2:85209323-85209342 None:intergenic 55.0%
GAGAAGGGGGAGTGAGGAAT+GGG + chr7_2:85207626-85207645 None:intergenic 55.0%
GAAATGGAGAAGGGGGAGTG+AGG + chr7_2:85207632-85207651 None:intergenic 55.0%
!! GACACGACCCATTTTAGCGG+CGG + chr7_2:85207658-85207677 None:intergenic 55.0%
TGTCATCCGTGCCCAACGTA+AGG - chr7_2:85207674-85207693 Msa1084850:three_prime_UTR 55.0%
GTCATCCGTGCCCAACGTAA+GGG - chr7_2:85207675-85207694 Msa1084850:three_prime_UTR 55.0%
GGAACCTGCTCCCTTACGTT+GGG + chr7_2:85207688-85207707 None:intergenic 55.0%
GAAGTCGAGGGAACGGAAAC+GGG + chr7_2:85207748-85207767 None:intergenic 55.0%
CGAAGTCGAGGGAACGGAAA+CGG + chr7_2:85207749-85207768 None:intergenic 55.0%
CGTTTCCGTTCCCTCGACTT+CGG - chr7_2:85207747-85207766 Msa1084850:three_prime_UTR 55.0%
ACCTGGATCGTGGATGACGT+CGG + chr7_2:85207805-85207824 None:intergenic 55.0%
TCGTGGTGCTCCTCTTGCTA+AGG - chr7_2:85207824-85207843 Msa1084850:three_prime_UTR 55.0%
! GGAGCTTTTCGTTGCTGCTG+AGG - chr7_2:85207884-85207903 Msa1084850:exon 55.0%
ATCATGGCCCTGCAGTCACT+TGG + chr7_2:85208872-85208891 None:intergenic 55.0%
AGTGACTGCAGGGCCATGAT+TGG - chr7_2:85208872-85208891 Msa1084850:intron 55.0%
GTGACTGCAGGGCCATGATT+GGG - chr7_2:85208873-85208892 Msa1084850:intron 55.0%
GCCATGATTGGGCAAGTTGC+TGG - chr7_2:85208884-85208903 Msa1084850:intron 55.0%
ATTGGGCAAGTTGCTGGTGG+TGG - chr7_2:85208890-85208909 Msa1084850:intron 55.0%
TGGTGATTACCTCCTCCGTG+GGG + chr7_2:85209025-85209044 None:intergenic 55.0%
!! GTTGGTGATTACCTCCTCCG+TGG + chr7_2:85209027-85209046 None:intergenic 55.0%
TGATGCTCCTCCTGGACAGA+AGG - chr7_2:85209075-85209094 Msa1084850:CDS 55.0%
AGACCAACCTTCTGTCCAGG+AGG + chr7_2:85209085-85209104 None:intergenic 55.0%
CTCATTGCTGCCAAGAGGAC+TGG - chr7_2:85209103-85209122 Msa1084850:CDS 55.0%
CCTAAGACGACCAGTCCTCT+TGG + chr7_2:85209116-85209135 None:intergenic 55.0%
!! CCAAGAGGACTGGTCGTCTT+AGG - chr7_2:85209113-85209132 Msa1084850:CDS 55.0%
! TAGGCAGTGAAGGTGCAGGA+AGG + chr7_2:85209319-85209338 None:intergenic 55.0%
! TCAGTAGGCAGTGAAGGTGC+AGG + chr7_2:85209323-85209342 None:intergenic 55.0%
GGAGAAGGGGGAGTGAGGAA+TGG + chr7_2:85207627-85207646 None:intergenic 60.0%
GCGGCGAGAAATGGAGAAGG+GGG + chr7_2:85207639-85207658 None:intergenic 60.0%
GGCGGCGAGAAATGGAGAAG+GGG + chr7_2:85207640-85207659 None:intergenic 60.0%
CGGCGGCGAGAAATGGAGAA+GGG + chr7_2:85207641-85207660 None:intergenic 60.0%
CTGCTCCCTTACGTTGGGCA+CGG + chr7_2:85207683-85207702 None:intergenic 60.0%
CGGAACCTGCTCCCTTACGT+TGG + chr7_2:85207689-85207708 None:intergenic 60.0%
TCCCACACACACCACCGCAA+AGG - chr7_2:85207717-85207736 Msa1084850:three_prime_UTR 60.0%
GCCTTTGCGGTGGTGTGTGT+GGG + chr7_2:85207721-85207740 None:intergenic 60.0%
GTTCGCCGAAGTCGAGGGAA+CGG + chr7_2:85207755-85207774 None:intergenic 60.0%
GTTGCGTTCGCCGAAGTCGA+GGG + chr7_2:85207760-85207779 None:intergenic 60.0%
CTCGACTTCGGCGAACGCAA+CGG - chr7_2:85207759-85207778 Msa1084850:three_prime_UTR 60.0%
CGTCGGTGACGACTCCTTTG+AGG + chr7_2:85207788-85207807 None:intergenic 60.0%
ACCGACGTCATCCACGATCC+AGG - chr7_2:85207801-85207820 Msa1084850:three_prime_UTR 60.0%
GTCATCCACGATCCAGGTCG+TGG - chr7_2:85207807-85207826 Msa1084850:three_prime_UTR 60.0%
!! GAGGGTCATGTTGGTGACCG+TGG - chr7_2:85208014-85208033 Msa1084850:CDS 60.0%
GTCAGACGTGATGCTCCTCC+TGG - chr7_2:85209067-85209086 Msa1084850:CDS 60.0%
GCTCCTCCTGGACAGAAGGT+TGG - chr7_2:85209079-85209098 Msa1084850:CDS 60.0%
GGAGAAGGGGGAGTGAGGAA+TGG + chr7_2:85207627-85207646 None:intergenic 60.0%
GCGGCGAGAAATGGAGAAGG+GGG + chr7_2:85207639-85207658 None:intergenic 60.0%
GGCGGCGAGAAATGGAGAAG+GGG + chr7_2:85207640-85207659 None:intergenic 60.0%
CGGCGGCGAGAAATGGAGAA+GGG + chr7_2:85207641-85207660 None:intergenic 60.0%
CTGCTCCCTTACGTTGGGCA+CGG + chr7_2:85207683-85207702 None:intergenic 60.0%
CGGAACCTGCTCCCTTACGT+TGG + chr7_2:85207689-85207708 None:intergenic 60.0%
TCCCACACACACCACCGCAA+AGG - chr7_2:85207717-85207736 Msa1084850:three_prime_UTR 60.0%
GCCTTTGCGGTGGTGTGTGT+GGG + chr7_2:85207721-85207740 None:intergenic 60.0%
GTTCGCCGAAGTCGAGGGAA+CGG + chr7_2:85207755-85207774 None:intergenic 60.0%
GTTGCGTTCGCCGAAGTCGA+GGG + chr7_2:85207760-85207779 None:intergenic 60.0%
CTCGACTTCGGCGAACGCAA+CGG - chr7_2:85207759-85207778 Msa1084850:three_prime_UTR 60.0%
CGTCGGTGACGACTCCTTTG+AGG + chr7_2:85207788-85207807 None:intergenic 60.0%
ACCGACGTCATCCACGATCC+AGG - chr7_2:85207801-85207820 Msa1084850:three_prime_UTR 60.0%
GTCATCCACGATCCAGGTCG+TGG - chr7_2:85207807-85207826 Msa1084850:three_prime_UTR 60.0%
!! GAGGGTCATGTTGGTGACCG+TGG - chr7_2:85208014-85208033 Msa1084850:CDS 60.0%
GTCAGACGTGATGCTCCTCC+TGG - chr7_2:85209067-85209086 Msa1084850:CDS 60.0%
GCTCCTCCTGGACAGAAGGT+TGG - chr7_2:85209079-85209098 Msa1084850:CDS 60.0%
GCGGCGGCGAGAAATGGAGA+AGG + chr7_2:85207642-85207661 None:intergenic 65.0%
CGTGCCCAACGTAAGGGAGC+AGG - chr7_2:85207681-85207700 Msa1084850:three_prime_UTR 65.0%
GGCCTTTGCGGTGGTGTGTG+TGG + chr7_2:85207722-85207741 None:intergenic 65.0%
TCGAGGGAACGGAAACGGGC+GGG + chr7_2:85207744-85207763 None:intergenic 65.0%
GTCGAGGGAACGGAAACGGG+CGG + chr7_2:85207745-85207764 None:intergenic 65.0%
CGTTGCGTTCGCCGAAGTCG+AGG + chr7_2:85207761-85207780 None:intergenic 65.0%
GAGCACCACGACCTGGATCG+TGG + chr7_2:85207815-85207834 None:intergenic 65.0%
!! GCAAGAGGAGCACCACGACC+TGG + chr7_2:85207822-85207841 None:intergenic 65.0%
CCTCCGTGGGGATGCTCAAC+AGG + chr7_2:85209013-85209032 None:intergenic 65.0%
CCTGTTGAGCATCCCCACGG+AGG - chr7_2:85209010-85209029 Msa1084850:CDS 65.0%
GTTGAGCATCCCCACGGAGG+AGG - chr7_2:85209013-85209032 Msa1084850:CDS 65.0%
GCGGCGGCGAGAAATGGAGA+AGG + chr7_2:85207642-85207661 None:intergenic 65.0%
CGTGCCCAACGTAAGGGAGC+AGG - chr7_2:85207681-85207700 Msa1084850:three_prime_UTR 65.0%
GGCCTTTGCGGTGGTGTGTG+TGG + chr7_2:85207722-85207741 None:intergenic 65.0%
TCGAGGGAACGGAAACGGGC+GGG + chr7_2:85207744-85207763 None:intergenic 65.0%
GTCGAGGGAACGGAAACGGG+CGG + chr7_2:85207745-85207764 None:intergenic 65.0%
CGTTGCGTTCGCCGAAGTCG+AGG + chr7_2:85207761-85207780 None:intergenic 65.0%
GAGCACCACGACCTGGATCG+TGG + chr7_2:85207815-85207834 None:intergenic 65.0%
!! GCAAGAGGAGCACCACGACC+TGG + chr7_2:85207822-85207841 None:intergenic 65.0%
CCTCCGTGGGGATGCTCAAC+AGG + chr7_2:85209013-85209032 None:intergenic 65.0%
CCTGTTGAGCATCCCCACGG+AGG - chr7_2:85209010-85209029 Msa1084850:CDS 65.0%
GTTGAGCATCCCCACGGAGG+AGG - chr7_2:85209013-85209032 Msa1084850:CDS 65.0%
GGAAACGGGCGGGGCCTTTG+CGG + chr7_2:85207734-85207753 None:intergenic 70.0%
CGAGGGAACGGAAACGGGCG+GGG + chr7_2:85207743-85207762 None:intergenic 70.0%
GGAAACGGGCGGGGCCTTTG+CGG + chr7_2:85207734-85207753 None:intergenic 70.0%
CGAGGGAACGGAAACGGGCG+GGG + chr7_2:85207743-85207762 None:intergenic 70.0%
AACGGGCGGGGCCTTTGCGG+TGG + chr7_2:85207731-85207750 None:intergenic 75.0%
AACGGGCGGGGCCTTTGCGG+TGG + chr7_2:85207731-85207750 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 85207601 85209460 85207601 ID=Msa1084850;Name=Msa1084850
chr7_2 mRNA 85207601 85209460 85207601 ID=Msa1084850-mRNA-1;Parent=Msa1084850;Name=Msa1084850-mRNA-1;_AED=0.28;_eAED=0.28;_QI=65|1|1|1|1|1|2|286|259
chr7_2 exon 85207601 85208226 85207601 ID=Msa1084850-mRNA-1:exon:23018;Parent=Msa1084850-mRNA-1
chr7_2 exon 85208956 85209460 85208956 ID=Msa1084850-mRNA-1:exon:23017;Parent=Msa1084850-mRNA-1
chr7_2 five_prime_UTR 85209396 85209460 85209396 ID=Msa1084850-mRNA-1:five_prime_utr;Parent=Msa1084850-mRNA-1
chr7_2 CDS 85208956 85209395 85208956 ID=Msa1084850-mRNA-1:cds;Parent=Msa1084850-mRNA-1
chr7_2 CDS 85207887 85208226 85207887 ID=Msa1084850-mRNA-1:cds;Parent=Msa1084850-mRNA-1
chr7_2 three_prime_UTR 85207601 85207886 85207601 ID=Msa1084850-mRNA-1:three_prime_utr;Parent=Msa1084850-mRNA-1
Gene Sequence

>Msa1084850

ATGGGTCGTGTCATCCGTGCCCAACGTAAGGGAGCAGGTTCCGTTTTCAAATCCCACACACACCACCGCAAAGGCCCCGCCCGTTTCCGTTCCCTCGACTTCGGCGAACGCAACGGTTACCTCAAAGGAGTCGTCACCGACGTCATCCACGATCCAGGTCGTGGTGCTCCTCTTGCTAAGGTGACTTTCCGTCATCCCTTCCGTTATCAGAAACAGAAGGAGCTTTTCGTTGCTGCTGAGGGTTTGTATACCGGTCAGTTTATTTACTGCGGTAAAAAGGCTACCCTTGTTGTTGGTAATGTTTTGCCTCTTAGATCTATTCCTGAAGGTGCTGTGATTTGTAATGTTGAGGGTCATGTTGGTGACCGTGGTGTTTTTGCTAGAGCTTCTGGTGATTATGCTATTGTTATCAGTCACAACCCCGATAATGATACCTCTAGGATCAAGCTTCCATCTGGTGCCAAGAAGATTGTGCCAAGTGACTGCAGGGCCATGATTGGGCAAGTTGCTGGTGGTGGAAGAACTGAGAAGCCAATGTTGAAGGCCGGTAATGCTTACCACAAGTTCAGAGTGAAGAGGAACTGTTGGCCTAAGGTTCGTGGTGTTGCTATGAATCCTGTTGAGCATCCCCACGGAGGAGGTAATCACCAACATATTGGTCATGCCAGTACTGTCAGACGTGATGCTCCTCCTGGACAGAAGGTTGGTCTCATTGCTGCCAAGAGGACTGGTCGTCTTAGGGGTCAAGCTGCTGCAAGTGCTGCTAAAGCCGATAAATAA
Protein sequence

>Msa1084850

MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVTFRHPFRYQKQKELFVAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEGHVGDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPMLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAKRTGRLRGQAAASAAKADK*