Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421920 | XP_003601798.1 | 97.802 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 7.37e-131 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421920 | sp|P51413|RL172_ARATH | 88.000 | 175 | 21 | 0 | 1 | 175 | 1 | 175 | 1.03e-114 | 326 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421920 | G7JC06 | 97.802 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 3.52e-131 | 374 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001390 | Msa0421920 | 0.806828 | 6.804359e-50 | -8.615850e-47 |
| Msa0003030 | Msa0421920 | 0.871756 | 5.362925e-67 | -8.615850e-47 |
| Msa0004760 | Msa0421920 | 0.820704 | 5.960063e-53 | -8.615850e-47 |
| Msa0042510 | Msa0421920 | 0.830481 | 2.866663e-55 | -8.615850e-47 |
| Msa0079560 | Msa0421920 | 0.848670 | 5.286410e-60 | -8.615850e-47 |
| Msa0089910 | Msa0421920 | 0.800653 | 1.302776e-48 | -8.615850e-47 |
| Msa0127230 | Msa0421920 | 0.850230 | 1.941716e-60 | -8.615850e-47 |
| Msa0146910 | Msa0421920 | 0.872470 | 3.103217e-67 | -8.615850e-47 |
| Msa0172300 | Msa0421920 | 0.824563 | 7.544151e-54 | -8.615850e-47 |
| Msa0182100 | Msa0421920 | 0.810676 | 1.023992e-50 | -8.615850e-47 |
| Msa0373350 | Msa0421920 | 0.979917 | 4.950510e-149 | -8.615850e-47 |
| Msa0376850 | Msa0421920 | 0.834960 | 2.215891e-56 | -8.615850e-47 |
| Msa0377610 | Msa0421920 | 0.858466 | 8.081226e-63 | -8.615850e-47 |
| Msa0379820 | Msa0421920 | -0.804654 | 1.946891e-49 | -8.615850e-47 |
| Msa0388520 | Msa0421920 | 0.834986 | 2.182146e-56 | -8.615850e-47 |
| Msa0388540 | Msa0421920 | 0.833077 | 6.561439e-56 | -8.615850e-47 |
| Msa0421920 | Msa0426820 | 0.846497 | 2.092428e-59 | -8.615850e-47 |
| Msa0421920 | Msa0426940 | 0.823451 | 1.375746e-53 | -8.615850e-47 |
| Msa0421920 | Msa0427380 | 0.874913 | 4.655137e-68 | -8.615850e-47 |
| Msa0421920 | Msa0467740 | 0.926991 | 2.188108e-91 | -8.615850e-47 |
| Msa0421920 | Msa0511760 | 0.822089 | 2.854251e-53 | -8.615850e-47 |
| Msa0421920 | Msa0514130 | 0.932839 | 4.653167e-95 | -8.615850e-47 |
| Msa0421920 | Msa0516830 | 0.835157 | 1.975575e-56 | -8.615850e-47 |
| Msa0421920 | Msa0524340 | 0.880087 | 7.324854e-70 | -8.615850e-47 |
| Msa0421920 | Msa0524450 | 0.826490 | 2.636955e-54 | -8.615850e-47 |
| Msa0421920 | Msa0578010 | 0.861073 | 1.325238e-63 | -8.615850e-47 |
| Msa0421920 | Msa0609120 | 0.810044 | 1.401959e-50 | -8.615850e-47 |
| Msa0421920 | Msa0621190 | 0.869490 | 2.977883e-66 | -8.615850e-47 |
| Msa0421920 | Msa0656450 | 0.876723 | 1.112854e-68 | -8.615850e-47 |
| Msa0421920 | Msa0663330 | -0.801008 | 1.102443e-48 | -8.615850e-47 |
| Msa0421920 | Msa0691760 | 0.854235 | 1.408420e-61 | -8.615850e-47 |
| Msa0421920 | Msa0700370 | 0.857383 | 1.694653e-62 | -8.615850e-47 |
| Msa0421920 | Msa0826610 | 0.808675 | 2.756937e-50 | -8.615850e-47 |
| Msa0421920 | Msa0864660 | 0.805478 | 1.309263e-49 | -8.615850e-47 |
| Msa0421920 | Msa0930360 | 0.839888 | 1.210339e-57 | -8.615850e-47 |
| Msa0421920 | Msa0998890 | 0.813774 | 2.158729e-51 | -8.615850e-47 |
| Msa0421920 | Msa1027870 | 0.849573 | 2.965141e-60 | -8.615850e-47 |
| Msa0421920 | Msa1035040 | 0.817372 | 3.411592e-52 | -8.615850e-47 |
| Msa0421920 | Msa1082050 | 0.807086 | 6.000343e-50 | -8.615850e-47 |
| Msa0421920 | Msa1084850 | 0.845030 | 5.235453e-59 | -8.615850e-47 |
| Msa0421920 | Msa1144630 | 0.834295 | 3.256345e-56 | -8.615850e-47 |
| Msa0421920 | Msa1165210 | 0.827447 | 1.556825e-54 | -8.615850e-47 |
| Msa0421920 | Msa1165700 | 0.866464 | 2.798425e-65 | -8.615850e-47 |
| Msa0421920 | Msa1227350 | 0.866806 | 2.177603e-65 | -8.615850e-47 |
| Msa0421920 | Msa1245270 | 0.827823 | 1.264192e-54 | -8.615850e-47 |
| Msa0421920 | Msa1266720 | -0.822005 | 2.985711e-53 | -8.615850e-47 |
| Msa0421920 | Msa1284800 | 0.879185 | 1.531113e-69 | -8.615850e-47 |
| Msa0421920 | Msa1363930 | 0.833121 | 6.397778e-56 | -8.615850e-47 |
| Msa0421920 | Msa1366540 | 0.859538 | 3.860076e-63 | -8.615850e-47 |
| Msa0421920 | Msa1387750 | 0.880144 | 6.991786e-70 | -8.615850e-47 |
| Msa0421920 | Msa1390760 | 0.805676 | 1.189976e-49 | -8.615850e-47 |
| Msa0421920 | Msa1403520 | 0.824784 | 6.689319e-54 | -8.615850e-47 |
| Msa0421920 | Msa1407550 | 0.824672 | 7.108894e-54 | -8.615850e-47 |
| Msa0421920 | Msa1413570 | 0.873174 | 1.803719e-67 | -8.615850e-47 |
| Msa0421920 | Msa1446510 | 0.861733 | 8.336719e-64 | -8.615850e-47 |
| Msa0421920 | Msa1462580 | 0.802720 | 4.908059e-49 | -8.615850e-47 |
| Msa0421920 | Msa1465890 | 0.852349 | 4.894349e-61 | -8.615850e-47 |
| Msa0256350 | Msa0421920 | 0.808401 | 3.153359e-50 | -8.615850e-47 |
| Msa0270160 | Msa0421920 | 0.806131 | 9.549024e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421920 | MtrunA17_Chr3g0122641 | 97.802 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 6.78e-135 | 374 |
| Msa0421920 | MtrunA17_Chr8g0377301 | 97.688 | 173 | 4 | 0 | 1 | 173 | 1 | 173 | 8.84e-128 | 356 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421920 | AT1G67430.1 | 88.000 | 175 | 21 | 0 | 1 | 175 | 1 | 175 | 1.05e-115 | 326 |
| Msa0421920 | AT1G27400.1 | 88.953 | 172 | 19 | 0 | 1 | 172 | 1 | 172 | 3.18e-115 | 325 |
| Msa0421920 | AT1G67430.2 | 65.143 | 175 | 17 | 1 | 1 | 175 | 1 | 131 | 1.09e-72 | 215 |
Find 71 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGAAGATTCAGCAAATT+AGG | 0.141947 | 3_2:-70956701 | None:intergenic |
| TCTTCATCATAAATTATTAT+TGG | 0.207122 | 3_2:+70958649 | Msa0421920:exon |
| TCTTCTTGTTTGTTGCCAAC+TGG | 0.236433 | 3_2:-70958603 | None:intergenic |
| AACATCTTCTAAGTATCTTT+TGG | 0.263817 | 3_2:-70957934 | None:intergenic |
| GCAACAAAATCTATAAATAA+AGG | 0.292617 | 3_2:-70958688 | None:intergenic |
| AACAACGCAATACCTCTTTC+TGG | 0.294555 | 3_2:-70958499 | None:intergenic |
| AAGATACTTAGAAGATGTTT+TGG | 0.295183 | 3_2:+70957938 | Msa0421920:CDS |
| GGTGGGATTGTCGGGCTCTT+TGG | 0.298164 | 3_2:-70956786 | None:intergenic |
| CTTCTTGTTTGTTGCCAACT+GGG | 0.310845 | 3_2:-70958602 | None:intergenic |
| GTTTGTTGCCAACTGGGTCT+CGG | 0.315567 | 3_2:-70958596 | None:intergenic |
| AACCCTAAGGTCAGCACCTC+TGG | 0.343663 | 3_2:-70956928 | None:intergenic |
| GACGTTTCTGTCGTGGTGTT+GGG | 0.366723 | 3_2:+70957985 | Msa0421920:CDS |
| AGGCCAGAGGTGCTGACCTT+AGG | 0.368932 | 3_2:+70956925 | Msa0421920:CDS |
| TGAGAAGATTCAGCAAATTA+GGG | 0.370437 | 3_2:-70956700 | None:intergenic |
| AAATAAAGGGTCTCAACTAT+TGG | 0.372508 | 3_2:-70958674 | None:intergenic |
| TAGAGTGTCTGTTCTTAGCT+TGG | 0.376754 | 3_2:-70958016 | None:intergenic |
| TGACCTTAGGGTTCATTTCA+AGG | 0.383447 | 3_2:+70956938 | Msa0421920:CDS |
| AAGGTCAGCACCTCTGGCCT+TGG | 0.384955 | 3_2:-70956922 | None:intergenic |
| TTACATTTGGTGGGATTGTC+GGG | 0.385846 | 3_2:-70956794 | None:intergenic |
| GGCCAGAGGTGCTGACCTTA+GGG | 0.395315 | 3_2:+70956926 | Msa0421920:CDS |
| AGACGTTTCTGTCGTGGTGT+TGG | 0.397264 | 3_2:+70957984 | Msa0421920:CDS |
| AGAGTGTCTGTTCTTAGCTT+GGG | 0.404467 | 3_2:-70958015 | None:intergenic |
| GCTAAGAACAGACACTCTAA+TGG | 0.408761 | 3_2:+70958020 | Msa0421920:CDS |
| GGCTGCTCTACAAATTCGTC+AGG | 0.412861 | 3_2:-70956750 | None:intergenic |
| TTTGTTGCCAACTGGGTCTC+GGG | 0.429555 | 3_2:-70958595 | None:intergenic |
| GGGAAACAGCGTTTGCCATC+AGG | 0.433818 | 3_2:+70957892 | Msa0421920:CDS |
| CAACAAAATCTATAAATAAA+GGG | 0.443020 | 3_2:-70958687 | None:intergenic |
| ATTACATTTGGTGGGATTGT+CGG | 0.454131 | 3_2:-70956795 | None:intergenic |
| TCACTTCTAGGTGAAAGGTT+TGG | 0.454273 | 3_2:+70958231 | Msa0421920:intron |
| CTAAGAACAGACACTCTAAT+GGG | 0.469410 | 3_2:+70958021 | Msa0421920:CDS |
| GATGGCAAACGCTGTTTCCC+TGG | 0.472125 | 3_2:-70957889 | None:intergenic |
| ATGAATTTAGCTGACTTGAC+AGG | 0.481469 | 3_2:-70958056 | None:intergenic |
| CTCTTAACACAAACAAGAAA+AGG | 0.485766 | 3_2:-70958890 | None:intergenic |
| TTTATGTTAATTGACTTGCT+TGG | 0.485985 | 3_2:+70958785 | Msa0421920:three_prime_UTR |
| TGAAAGGAATGGCCTGTTTG+TGG | 0.487121 | 3_2:-70957962 | None:intergenic |
| AACAAAGAAGACGTACCTAC+AGG | 0.490498 | 3_2:+70958302 | Msa0421920:CDS |
| GAAAGGAATGGCCTGTTTGT+GGG | 0.496437 | 3_2:-70957961 | None:intergenic |
| CCTTTCAGACGTTTCTGTCG+TGG | 0.497413 | 3_2:+70957978 | Msa0421920:CDS |
| ATTGTTCACTTCTAGGTGAA+AGG | 0.499870 | 3_2:+70958226 | Msa0421920:intron |
| AGACGTACCTACAGGGCTCA+TGG | 0.520971 | 3_2:+70958310 | Msa0421920:CDS |
| ACTCTAATGGGCAAGGACGC+TGG | 0.524787 | 3_2:+70958033 | Msa0421920:CDS |
| AGAGAGGAATTACATTTGGT+GGG | 0.528638 | 3_2:-70956803 | None:intergenic |
| TCTCTACGTGTCTCATATCC+AGG | 0.529280 | 3_2:+70958264 | Msa0421920:CDS |
| GAGAGAGGAATTACATTTGG+TGG | 0.535354 | 3_2:-70956804 | None:intergenic |
| ATCTGTAATTGCAGCAACCA+AGG | 0.554826 | 3_2:+70956905 | Msa0421920:intron |
| GGTCAGGGGCAACTTCCTGA+TGG | 0.558655 | 3_2:-70957907 | None:intergenic |
| GGAAGAGGCTGTCCAGAAAG+AGG | 0.559016 | 3_2:+70958487 | Msa0421920:CDS |
| GATTCTTCCATGAGCCCTGT+AGG | 0.559080 | 3_2:-70958317 | None:intergenic |
| TTACCTTGAAATGAACCCTA+AGG | 0.566981 | 3_2:-70956941 | None:intergenic |
| ACGAATTTGTAGAGCAGCCA+TGG | 0.572014 | 3_2:+70956754 | Msa0421920:exon |
| GATACTATCTGAGAAGGAAG+AGG | 0.578357 | 3_2:+70958472 | Msa0421920:CDS |
| CCACGACAGAAACGTCTGAA+AGG | 0.578584 | 3_2:-70957978 | None:intergenic |
| AAAGGACGTGCAAAACTCAA+AGG | 0.597080 | 3_2:-70958872 | None:intergenic |
| TGAACTCGATTGTGGGAAGG+AGG | 0.598251 | 3_2:-70956724 | None:intergenic |
| CTAGGTGAAAGGTTTGGATG+TGG | 0.599987 | 3_2:+70958237 | Msa0421920:intron |
| TCTGTAGCCCGAGACCCAGT+TGG | 0.601405 | 3_2:+70958588 | Msa0421920:intron |
| GGGTGAACTCGATTGTGGGA+AGG | 0.604988 | 3_2:-70956727 | None:intergenic |
| GTTTCTGTCGTGGTGTTGGG+AGG | 0.606753 | 3_2:+70957988 | Msa0421920:CDS |
| CTCTTTGGAGTACTTCACCA+TGG | 0.611437 | 3_2:-70956771 | None:intergenic |
| ACAAAGAAGACGTACCTACA+GGG | 0.613276 | 3_2:+70958303 | Msa0421920:CDS |
| CGAACTGATACTATCTGAGA+AGG | 0.615825 | 3_2:+70958466 | Msa0421920:CDS |
| AACAGACACTCTAATGGGCA+AGG | 0.616551 | 3_2:+70958026 | Msa0421920:CDS |
| ACAGAAACGTCTGAAAGGAA+TGG | 0.620803 | 3_2:-70957973 | None:intergenic |
| TGCTCTACAAATTCGTCAGG+GGG | 0.622983 | 3_2:-70956747 | None:intergenic |
| GCTGCTCTACAAATTCGTCA+GGG | 0.623025 | 3_2:-70956749 | None:intergenic |
| AAGTCTCAAGCTGTTCGAAG+TGG | 0.631486 | 3_2:+70958625 | Msa0421920:CDS |
| AGTATCAGTTCGATGTGGCA+AGG | 0.635093 | 3_2:-70958455 | None:intergenic |
| CTGCTCTACAAATTCGTCAG+GGG | 0.648836 | 3_2:-70956748 | None:intergenic |
| ATTGCAGCAACCAAGGCCAG+AGG | 0.682613 | 3_2:+70956912 | Msa0421920:intron |
| GTGGCAAGGAGATGACATGT+AGG | 0.691037 | 3_2:-70958441 | None:intergenic |
| CAGATAGTATCAGTTCGATG+TGG | 0.705561 | 3_2:-70958460 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAATACATATGAA+GGG | - | chr3_2:70957630-70957649 | None:intergenic | 10.0% |
| !! | TTAAAAATAAATACATATGA+AGG | - | chr3_2:70957631-70957650 | None:intergenic | 10.0% |
| !! | TAAAAATAAATACATATGAA+GGG | - | chr3_2:70957630-70957649 | None:intergenic | 10.0% |
| !! | TTAAAAATAAATACATATGA+AGG | - | chr3_2:70957631-70957650 | None:intergenic | 10.0% |
| !!! | AATTAACTTTTTTATCCAAA+AGG | - | chr3_2:70957359-70957378 | None:intergenic | 15.0% |
| !! | TCTTCATCATAAATTATTAT+TGG | + | chr3_2:70958649-70958668 | Msa0421920:exon | 15.0% |
| !! | CAACAAAATCTATAAATAAA+GGG | - | chr3_2:70958690-70958709 | None:intergenic | 15.0% |
| !!! | AATTAACTTTTTTATCCAAA+AGG | - | chr3_2:70957359-70957378 | None:intergenic | 15.0% |
| !! | TCTTCATCATAAATTATTAT+TGG | + | chr3_2:70958649-70958668 | Msa0421920:exon | 15.0% |
| !! | CAACAAAATCTATAAATAAA+GGG | - | chr3_2:70958690-70958709 | None:intergenic | 15.0% |
| !! | GATTAATTTAACCTAATTTG+TGG | + | chr3_2:70956877-70956896 | Msa0421920:intron | 20.0% |
| !! | TATTATTCATAATCTTGTCA+AGG | + | chr3_2:70957143-70957162 | Msa0421920:intron | 20.0% |
| !!! | CGGTGTTTTTTTTTTTTTTT+TGG | + | chr3_2:70958415-70958434 | Msa0421920:intron | 20.0% |
| !! | GCAACAAAATCTATAAATAA+AGG | - | chr3_2:70958691-70958710 | None:intergenic | 20.0% |
| !! | GATTAATTTAACCTAATTTG+TGG | + | chr3_2:70956877-70956896 | Msa0421920:intron | 20.0% |
| !! | TATTATTCATAATCTTGTCA+AGG | + | chr3_2:70957143-70957162 | Msa0421920:intron | 20.0% |
| !!! | CGGTGTTTTTTTTTTTTTTT+TGG | + | chr3_2:70958415-70958434 | Msa0421920:intron | 20.0% |
| !! | GCAACAAAATCTATAAATAA+AGG | - | chr3_2:70958691-70958710 | None:intergenic | 20.0% |
| ! | ACAAAATGCAATTTCTCTAT+AGG | - | chr3_2:70957304-70957323 | None:intergenic | 25.0% |
| !!! | ACTTTTTTATCCAAAAGGTA+AGG | - | chr3_2:70957354-70957373 | None:intergenic | 25.0% |
| !! | ATCAGTAGATTAGTTGAAAA+TGG | + | chr3_2:70957582-70957601 | Msa0421920:intron | 25.0% |
| ! | ATTAGTTGAAAATGGTCATT+TGG | + | chr3_2:70957590-70957609 | Msa0421920:intron | 25.0% |
| !! | AACATCTTCTAAGTATCTTT+TGG | - | chr3_2:70957937-70957956 | None:intergenic | 25.0% |
| !! | AAGATACTTAGAAGATGTTT+TGG | + | chr3_2:70957938-70957957 | Msa0421920:CDS | 25.0% |
| ! | GCATTCTTATACTTATATAC+TGG | + | chr3_2:70958392-70958411 | Msa0421920:intron | 25.0% |
| ! | TTCTTATACTTATATACTGG+CGG | + | chr3_2:70958395-70958414 | Msa0421920:intron | 25.0% |
| !!! | TTTATGTTAATTGACTTGCT+TGG | + | chr3_2:70958785-70958804 | Msa0421920:three_prime_UTR | 25.0% |
| ! | ACAAAATGCAATTTCTCTAT+AGG | - | chr3_2:70957304-70957323 | None:intergenic | 25.0% |
| !!! | ACTTTTTTATCCAAAAGGTA+AGG | - | chr3_2:70957354-70957373 | None:intergenic | 25.0% |
| !! | ATCAGTAGATTAGTTGAAAA+TGG | + | chr3_2:70957582-70957601 | Msa0421920:intron | 25.0% |
| ! | ATTAGTTGAAAATGGTCATT+TGG | + | chr3_2:70957590-70957609 | Msa0421920:intron | 25.0% |
| !! | AACATCTTCTAAGTATCTTT+TGG | - | chr3_2:70957937-70957956 | None:intergenic | 25.0% |
| !! | AAGATACTTAGAAGATGTTT+TGG | + | chr3_2:70957938-70957957 | Msa0421920:CDS | 25.0% |
| ! | GCATTCTTATACTTATATAC+TGG | + | chr3_2:70958392-70958411 | Msa0421920:intron | 25.0% |
| ! | TTCTTATACTTATATACTGG+CGG | + | chr3_2:70958395-70958414 | Msa0421920:intron | 25.0% |
| !!! | TTTATGTTAATTGACTTGCT+TGG | + | chr3_2:70958785-70958804 | Msa0421920:three_prime_UTR | 25.0% |
| TGAGAAGATTCAGCAAATTA+GGG | - | chr3_2:70956703-70956722 | None:intergenic | 30.0% | |
| ACAGATCAAAACCACAAATT+AGG | - | chr3_2:70956891-70956910 | None:intergenic | 30.0% | |
| GTAGAGATAGATCATGATAT+AGG | + | chr3_2:70956993-70957012 | Msa0421920:intron | 30.0% | |
| TAGCTGATCTAGTGAATTTA+CGG | + | chr3_2:70957067-70957086 | Msa0421920:intron | 30.0% | |
| AAACATAAGCCAATCCAAAA+GGG | - | chr3_2:70957094-70957113 | None:intergenic | 30.0% | |
| AAGTCATAAGTTCTCACTAA+CGG | - | chr3_2:70957205-70957224 | None:intergenic | 30.0% | |
| CAATTTCTCTATAGGACATA+GGG | - | chr3_2:70957296-70957315 | None:intergenic | 30.0% | |
| TAAGCACTAATGAGAATCTT+TGG | - | chr3_2:70957561-70957580 | None:intergenic | 30.0% | |
| CTAAGAACAAAAACAACAAC+AGG | - | chr3_2:70957822-70957841 | None:intergenic | 30.0% | |
| !!! | TTCTAAGTATCTTTTGGCTT+TGG | - | chr3_2:70957931-70957950 | None:intergenic | 30.0% |
| TTGTTTGATTGTTCACTTCT+AGG | + | chr3_2:70958219-70958238 | Msa0421920:intron | 30.0% | |
| TATTCTTATTCGTGTTTGGA+TGG | + | chr3_2:70958355-70958374 | Msa0421920:intron | 30.0% | |
| AGTGGAGATGAAAATTCAAA+AGG | - | chr3_2:70958531-70958550 | None:intergenic | 30.0% | |
| ! | ATTTTCATCTCCACTCTAAA+AGG | + | chr3_2:70958536-70958555 | Msa0421920:intron | 30.0% |
| !! | TTTTCATCTCCACTCTAAAA+GGG | + | chr3_2:70958537-70958556 | Msa0421920:intron | 30.0% |
| AAATAAAGGGTCTCAACTAT+TGG | - | chr3_2:70958677-70958696 | None:intergenic | 30.0% | |
| !! | GACTTGCTTGGAAAATTTTA+TGG | + | chr3_2:70958797-70958816 | Msa0421920:three_prime_UTR | 30.0% |
| ! | TTGCTTGGAAAATTTTATGG+TGG | + | chr3_2:70958800-70958819 | Msa0421920:three_prime_UTR | 30.0% |
| !!! | GATTCAAGTTTTGTTTACCA+TGG | + | chr3_2:70958836-70958855 | Msa0421920:three_prime_UTR | 30.0% |
| TGAGAAGATTCAGCAAATTA+GGG | - | chr3_2:70956703-70956722 | None:intergenic | 30.0% | |
| ACAGATCAAAACCACAAATT+AGG | - | chr3_2:70956891-70956910 | None:intergenic | 30.0% | |
| GTAGAGATAGATCATGATAT+AGG | + | chr3_2:70956993-70957012 | Msa0421920:intron | 30.0% | |
| TAGCTGATCTAGTGAATTTA+CGG | + | chr3_2:70957067-70957086 | Msa0421920:intron | 30.0% | |
| AAACATAAGCCAATCCAAAA+GGG | - | chr3_2:70957094-70957113 | None:intergenic | 30.0% | |
| AAGTCATAAGTTCTCACTAA+CGG | - | chr3_2:70957205-70957224 | None:intergenic | 30.0% | |
| CAATTTCTCTATAGGACATA+GGG | - | chr3_2:70957296-70957315 | None:intergenic | 30.0% | |
| TAAGCACTAATGAGAATCTT+TGG | - | chr3_2:70957561-70957580 | None:intergenic | 30.0% | |
| CTAAGAACAAAAACAACAAC+AGG | - | chr3_2:70957822-70957841 | None:intergenic | 30.0% | |
| !!! | TTCTAAGTATCTTTTGGCTT+TGG | - | chr3_2:70957931-70957950 | None:intergenic | 30.0% |
| TTGTTTGATTGTTCACTTCT+AGG | + | chr3_2:70958219-70958238 | Msa0421920:intron | 30.0% | |
| TATTCTTATTCGTGTTTGGA+TGG | + | chr3_2:70958355-70958374 | Msa0421920:intron | 30.0% | |
| AGTGGAGATGAAAATTCAAA+AGG | - | chr3_2:70958531-70958550 | None:intergenic | 30.0% | |
| ! | ATTTTCATCTCCACTCTAAA+AGG | + | chr3_2:70958536-70958555 | Msa0421920:intron | 30.0% |
| !! | TTTTCATCTCCACTCTAAAA+GGG | + | chr3_2:70958537-70958556 | Msa0421920:intron | 30.0% |
| AAATAAAGGGTCTCAACTAT+TGG | - | chr3_2:70958677-70958696 | None:intergenic | 30.0% | |
| !! | GACTTGCTTGGAAAATTTTA+TGG | + | chr3_2:70958797-70958816 | Msa0421920:three_prime_UTR | 30.0% |
| ! | TTGCTTGGAAAATTTTATGG+TGG | + | chr3_2:70958800-70958819 | Msa0421920:three_prime_UTR | 30.0% |
| !!! | GATTCAAGTTTTGTTTACCA+TGG | + | chr3_2:70958836-70958855 | Msa0421920:three_prime_UTR | 30.0% |
| CTGAGAAGATTCAGCAAATT+AGG | - | chr3_2:70956704-70956723 | None:intergenic | 35.0% | |
| ! | ATTACATTTGGTGGGATTGT+CGG | - | chr3_2:70956798-70956817 | None:intergenic | 35.0% |
| AGAGAGGAATTACATTTGGT+GGG | - | chr3_2:70956806-70956825 | None:intergenic | 35.0% | |
| ATCGAGAGAGGAATTACATT+TGG | - | chr3_2:70956810-70956829 | None:intergenic | 35.0% | |
| ATGAAAGAAGAAATCGAGAG+AGG | - | chr3_2:70956822-70956841 | None:intergenic | 35.0% | |
| TTACCTTGAAATGAACCCTA+AGG | - | chr3_2:70956944-70956963 | None:intergenic | 35.0% | |
| AGCTGATCTAGTGAATTTAC+GGG | + | chr3_2:70957068-70957087 | Msa0421920:intron | 35.0% | |
| CAAACATAAGCCAATCCAAA+AGG | - | chr3_2:70957095-70957114 | None:intergenic | 35.0% | |
| TATAGGACATAGGGTTCATT+TGG | - | chr3_2:70957287-70957306 | None:intergenic | 35.0% | |
| GCAATTTCTCTATAGGACAT+AGG | - | chr3_2:70957297-70957316 | None:intergenic | 35.0% | |
| ! | TTATAACCTGCCTTACCTTT+TGG | + | chr3_2:70957341-70957360 | Msa0421920:intron | 35.0% |
| ! | TTTTATCCAAAAGGTAAGGC+AGG | - | chr3_2:70957350-70957369 | None:intergenic | 35.0% |
| ! | AACTATCCTTTGAGAGCATA+GGG | + | chr3_2:70957484-70957503 | Msa0421920:intron | 35.0% |
| TTATTTCCCTATGCTCTCAA+AGG | - | chr3_2:70957493-70957512 | None:intergenic | 35.0% | |
| ! | GAGAATCTTTGGAAGACATA+TGG | - | chr3_2:70957550-70957569 | None:intergenic | 35.0% |
| ATACATATGAAGGGCAAGTT+TGG | - | chr3_2:70957621-70957640 | None:intergenic | 35.0% | |
| !! | TCAAATTTGGTGGACTAGTT+TGG | + | chr3_2:70957776-70957795 | Msa0421920:intron | 35.0% |
| CTAAGAACAGACACTCTAAT+GGG | + | chr3_2:70958021-70958040 | Msa0421920:CDS | 35.0% | |
| !! | ATGAATTTAGCTGACTTGAC+AGG | - | chr3_2:70958059-70958078 | None:intergenic | 35.0% |
| ATTGTTCACTTCTAGGTGAA+AGG | + | chr3_2:70958226-70958245 | Msa0421920:intron | 35.0% | |
| GCACTATTCTTATTCGTGTT+TGG | + | chr3_2:70958351-70958370 | Msa0421920:intron | 35.0% | |
| !! | GATACAATACCCTTTTAGAG+TGG | - | chr3_2:70958549-70958568 | None:intergenic | 35.0% |
| !!! | AACTCAAAGGTATTTTCACG+AGG | - | chr3_2:70958862-70958881 | None:intergenic | 35.0% |
| CTGAGAAGATTCAGCAAATT+AGG | - | chr3_2:70956704-70956723 | None:intergenic | 35.0% | |
| ! | ATTACATTTGGTGGGATTGT+CGG | - | chr3_2:70956798-70956817 | None:intergenic | 35.0% |
| AGAGAGGAATTACATTTGGT+GGG | - | chr3_2:70956806-70956825 | None:intergenic | 35.0% | |
| ATCGAGAGAGGAATTACATT+TGG | - | chr3_2:70956810-70956829 | None:intergenic | 35.0% | |
| ATGAAAGAAGAAATCGAGAG+AGG | - | chr3_2:70956822-70956841 | None:intergenic | 35.0% | |
| TTACCTTGAAATGAACCCTA+AGG | - | chr3_2:70956944-70956963 | None:intergenic | 35.0% | |
| AGCTGATCTAGTGAATTTAC+GGG | + | chr3_2:70957068-70957087 | Msa0421920:intron | 35.0% | |
| CAAACATAAGCCAATCCAAA+AGG | - | chr3_2:70957095-70957114 | None:intergenic | 35.0% | |
| TATAGGACATAGGGTTCATT+TGG | - | chr3_2:70957287-70957306 | None:intergenic | 35.0% | |
| GCAATTTCTCTATAGGACAT+AGG | - | chr3_2:70957297-70957316 | None:intergenic | 35.0% | |
| ! | TTATAACCTGCCTTACCTTT+TGG | + | chr3_2:70957341-70957360 | Msa0421920:intron | 35.0% |
| ! | TTTTATCCAAAAGGTAAGGC+AGG | - | chr3_2:70957350-70957369 | None:intergenic | 35.0% |
| ! | AACTATCCTTTGAGAGCATA+GGG | + | chr3_2:70957484-70957503 | Msa0421920:intron | 35.0% |
| TTATTTCCCTATGCTCTCAA+AGG | - | chr3_2:70957493-70957512 | None:intergenic | 35.0% | |
| ! | GAGAATCTTTGGAAGACATA+TGG | - | chr3_2:70957550-70957569 | None:intergenic | 35.0% |
| ATACATATGAAGGGCAAGTT+TGG | - | chr3_2:70957621-70957640 | None:intergenic | 35.0% | |
| !! | TCAAATTTGGTGGACTAGTT+TGG | + | chr3_2:70957776-70957795 | Msa0421920:intron | 35.0% |
| CTAAGAACAGACACTCTAAT+GGG | + | chr3_2:70958021-70958040 | Msa0421920:CDS | 35.0% | |
| !! | ATGAATTTAGCTGACTTGAC+AGG | - | chr3_2:70958059-70958078 | None:intergenic | 35.0% |
| ATTGTTCACTTCTAGGTGAA+AGG | + | chr3_2:70958226-70958245 | Msa0421920:intron | 35.0% | |
| GCACTATTCTTATTCGTGTT+TGG | + | chr3_2:70958351-70958370 | Msa0421920:intron | 35.0% | |
| !! | GATACAATACCCTTTTAGAG+TGG | - | chr3_2:70958549-70958568 | None:intergenic | 35.0% |
| !!! | AACTCAAAGGTATTTTCACG+AGG | - | chr3_2:70958862-70958881 | None:intergenic | 35.0% |
| ! | TTACATTTGGTGGGATTGTC+GGG | - | chr3_2:70956797-70956816 | None:intergenic | 40.0% |
| GAGAGAGGAATTACATTTGG+TGG | - | chr3_2:70956807-70956826 | None:intergenic | 40.0% | |
| ATCTGTAATTGCAGCAACCA+AGG | + | chr3_2:70956905-70956924 | Msa0421920:intron | 40.0% | |
| TGACCTTAGGGTTCATTTCA+AGG | + | chr3_2:70956938-70956957 | Msa0421920:CDS | 40.0% | |
| ! | GAACTATCCTTTGAGAGCAT+AGG | + | chr3_2:70957483-70957502 | Msa0421920:intron | 40.0% |
| ! | GGCAAATCAAGTGGGTTTAA+AGG | - | chr3_2:70957688-70957707 | None:intergenic | 40.0% |
| ACCATCATGGCAAATCAAGT+GGG | - | chr3_2:70957696-70957715 | None:intergenic | 40.0% | |
| !! | TTTCCCCTTGGTGTCAAATT+TGG | + | chr3_2:70957763-70957782 | Msa0421920:intron | 40.0% |
| TCCACCAAATTTGACACCAA+GGG | - | chr3_2:70957770-70957789 | None:intergenic | 40.0% | |
| ! | ATTTTACTGTGCAGAACACC+AGG | + | chr3_2:70957871-70957890 | Msa0421920:intron | 40.0% |
| ! | TTTTACTGTGCAGAACACCA+GGG | + | chr3_2:70957872-70957891 | Msa0421920:intron | 40.0% |
| !!! | TATCTTTTGGCTTTGGTCAG+GGG | - | chr3_2:70957924-70957943 | None:intergenic | 40.0% |
| !!! | GTATCTTTTGGCTTTGGTCA+GGG | - | chr3_2:70957925-70957944 | None:intergenic | 40.0% |
| !!! | AGTATCTTTTGGCTTTGGTC+AGG | - | chr3_2:70957926-70957945 | None:intergenic | 40.0% |
| ACAGAAACGTCTGAAAGGAA+TGG | - | chr3_2:70957976-70957995 | None:intergenic | 40.0% | |
| ! | AGAGTGTCTGTTCTTAGCTT+GGG | - | chr3_2:70958018-70958037 | None:intergenic | 40.0% |
| ! | TAGAGTGTCTGTTCTTAGCT+TGG | - | chr3_2:70958019-70958038 | None:intergenic | 40.0% |
| GCTAAGAACAGACACTCTAA+TGG | + | chr3_2:70958020-70958039 | Msa0421920:CDS | 40.0% | |
| TGCAGTTTGATGCGTTTAAC+TGG | + | chr3_2:70958176-70958195 | Msa0421920:intron | 40.0% | |
| TCACTTCTAGGTGAAAGGTT+TGG | + | chr3_2:70958231-70958250 | Msa0421920:intron | 40.0% | |
| !! | GTTTTTGAGCTTGATTGACC+TGG | - | chr3_2:70958285-70958304 | None:intergenic | 40.0% |
| AACAAAGAAGACGTACCTAC+AGG | + | chr3_2:70958302-70958321 | Msa0421920:CDS | 40.0% | |
| ACAAAGAAGACGTACCTACA+GGG | + | chr3_2:70958303-70958322 | Msa0421920:CDS | 40.0% | |
| CAGATAGTATCAGTTCGATG+TGG | - | chr3_2:70958463-70958482 | None:intergenic | 40.0% | |
| CGAACTGATACTATCTGAGA+AGG | + | chr3_2:70958466-70958485 | Msa0421920:CDS | 40.0% | |
| GATACTATCTGAGAAGGAAG+AGG | + | chr3_2:70958472-70958491 | Msa0421920:CDS | 40.0% | |
| AACAACGCAATACCTCTTTC+TGG | - | chr3_2:70958502-70958521 | None:intergenic | 40.0% | |
| ! | CTTCTTGTTTGTTGCCAACT+GGG | - | chr3_2:70958605-70958624 | None:intergenic | 40.0% |
| ! | TCTTCTTGTTTGTTGCCAAC+TGG | - | chr3_2:70958606-70958625 | None:intergenic | 40.0% |
| AAAGGACGTGCAAAACTCAA+AGG | - | chr3_2:70958875-70958894 | None:intergenic | 40.0% | |
| ! | TTACATTTGGTGGGATTGTC+GGG | - | chr3_2:70956797-70956816 | None:intergenic | 40.0% |
| GAGAGAGGAATTACATTTGG+TGG | - | chr3_2:70956807-70956826 | None:intergenic | 40.0% | |
| ATCTGTAATTGCAGCAACCA+AGG | + | chr3_2:70956905-70956924 | Msa0421920:intron | 40.0% | |
| TGACCTTAGGGTTCATTTCA+AGG | + | chr3_2:70956938-70956957 | Msa0421920:CDS | 40.0% | |
| ! | GAACTATCCTTTGAGAGCAT+AGG | + | chr3_2:70957483-70957502 | Msa0421920:intron | 40.0% |
| ! | GGCAAATCAAGTGGGTTTAA+AGG | - | chr3_2:70957688-70957707 | None:intergenic | 40.0% |
| ACCATCATGGCAAATCAAGT+GGG | - | chr3_2:70957696-70957715 | None:intergenic | 40.0% | |
| !! | TTTCCCCTTGGTGTCAAATT+TGG | + | chr3_2:70957763-70957782 | Msa0421920:intron | 40.0% |
| TCCACCAAATTTGACACCAA+GGG | - | chr3_2:70957770-70957789 | None:intergenic | 40.0% | |
| ! | ATTTTACTGTGCAGAACACC+AGG | + | chr3_2:70957871-70957890 | Msa0421920:intron | 40.0% |
| ! | TTTTACTGTGCAGAACACCA+GGG | + | chr3_2:70957872-70957891 | Msa0421920:intron | 40.0% |
| !!! | TATCTTTTGGCTTTGGTCAG+GGG | - | chr3_2:70957924-70957943 | None:intergenic | 40.0% |
| !!! | GTATCTTTTGGCTTTGGTCA+GGG | - | chr3_2:70957925-70957944 | None:intergenic | 40.0% |
| !!! | AGTATCTTTTGGCTTTGGTC+AGG | - | chr3_2:70957926-70957945 | None:intergenic | 40.0% |
| ACAGAAACGTCTGAAAGGAA+TGG | - | chr3_2:70957976-70957995 | None:intergenic | 40.0% | |
| ! | AGAGTGTCTGTTCTTAGCTT+GGG | - | chr3_2:70958018-70958037 | None:intergenic | 40.0% |
| ! | TAGAGTGTCTGTTCTTAGCT+TGG | - | chr3_2:70958019-70958038 | None:intergenic | 40.0% |
| GCTAAGAACAGACACTCTAA+TGG | + | chr3_2:70958020-70958039 | Msa0421920:CDS | 40.0% | |
| TGCAGTTTGATGCGTTTAAC+TGG | + | chr3_2:70958176-70958195 | Msa0421920:intron | 40.0% | |
| TCACTTCTAGGTGAAAGGTT+TGG | + | chr3_2:70958231-70958250 | Msa0421920:intron | 40.0% | |
| !! | GTTTTTGAGCTTGATTGACC+TGG | - | chr3_2:70958285-70958304 | None:intergenic | 40.0% |
| AACAAAGAAGACGTACCTAC+AGG | + | chr3_2:70958302-70958321 | Msa0421920:CDS | 40.0% | |
| ACAAAGAAGACGTACCTACA+GGG | + | chr3_2:70958303-70958322 | Msa0421920:CDS | 40.0% | |
| CAGATAGTATCAGTTCGATG+TGG | - | chr3_2:70958463-70958482 | None:intergenic | 40.0% | |
| CGAACTGATACTATCTGAGA+AGG | + | chr3_2:70958466-70958485 | Msa0421920:CDS | 40.0% | |
| GATACTATCTGAGAAGGAAG+AGG | + | chr3_2:70958472-70958491 | Msa0421920:CDS | 40.0% | |
| AACAACGCAATACCTCTTTC+TGG | - | chr3_2:70958502-70958521 | None:intergenic | 40.0% | |
| ! | CTTCTTGTTTGTTGCCAACT+GGG | - | chr3_2:70958605-70958624 | None:intergenic | 40.0% |
| ! | TCTTCTTGTTTGTTGCCAAC+TGG | - | chr3_2:70958606-70958625 | None:intergenic | 40.0% |
| AAAGGACGTGCAAAACTCAA+AGG | - | chr3_2:70958875-70958894 | None:intergenic | 40.0% | |
| TGCTCTACAAATTCGTCAGG+GGG | - | chr3_2:70956750-70956769 | None:intergenic | 45.0% | |
| CTGCTCTACAAATTCGTCAG+GGG | - | chr3_2:70956751-70956770 | None:intergenic | 45.0% | |
| GCTGCTCTACAAATTCGTCA+GGG | - | chr3_2:70956752-70956771 | None:intergenic | 45.0% | |
| ACGAATTTGTAGAGCAGCCA+TGG | + | chr3_2:70956754-70956773 | Msa0421920:exon | 45.0% | |
| !! | CTCTTTGGAGTACTTCACCA+TGG | - | chr3_2:70956774-70956793 | None:intergenic | 45.0% |
| GATCAGCTATTCTGACAGCT+CGG | - | chr3_2:70957056-70957075 | None:intergenic | 45.0% | |
| ! | AGTGAATTTACGGGCCCTTT+TGG | + | chr3_2:70957077-70957096 | Msa0421920:intron | 45.0% |
| ! | ATTTACGGGCCCTTTTGGAT+TGG | + | chr3_2:70957082-70957101 | Msa0421920:intron | 45.0% |
| !! | ACCCACTTGATTTGCCATGA+TGG | + | chr3_2:70957692-70957711 | Msa0421920:intron | 45.0% |
| CACCATCATGGCAAATCAAG+TGG | - | chr3_2:70957697-70957716 | None:intergenic | 45.0% | |
| !! | TTGCCATGATGGTGTTGACT+TGG | + | chr3_2:70957703-70957722 | Msa0421920:intron | 45.0% |
| !! | TGCCATGATGGTGTTGACTT+GGG | + | chr3_2:70957704-70957723 | Msa0421920:intron | 45.0% |
| AACAAACCTGAGACCTTTGG+AGG | - | chr3_2:70957745-70957764 | None:intergenic | 45.0% | |
| GGAAACAAACCTGAGACCTT+TGG | - | chr3_2:70957748-70957767 | None:intergenic | 45.0% | |
| CCACCAAATTTGACACCAAG+GGG | - | chr3_2:70957769-70957788 | None:intergenic | 45.0% | |
| GTCCACCAAATTTGACACCA+AGG | - | chr3_2:70957771-70957790 | None:intergenic | 45.0% | |
| !!! | AGATGTTTTGGCCCACAAAC+AGG | + | chr3_2:70957950-70957969 | Msa0421920:CDS | 45.0% |
| GAAAGGAATGGCCTGTTTGT+GGG | - | chr3_2:70957964-70957983 | None:intergenic | 45.0% | |
| TGAAAGGAATGGCCTGTTTG+TGG | - | chr3_2:70957965-70957984 | None:intergenic | 45.0% | |
| ! | AACAGACACTCTAATGGGCA+AGG | + | chr3_2:70958026-70958045 | Msa0421920:CDS | 45.0% |
| CTAGGTGAAAGGTTTGGATG+TGG | + | chr3_2:70958237-70958256 | Msa0421920:intron | 45.0% | |
| TCTCTACGTGTCTCATATCC+AGG | + | chr3_2:70958264-70958283 | Msa0421920:CDS | 45.0% | |
| AGTATCAGTTCGATGTGGCA+AGG | - | chr3_2:70958458-70958477 | None:intergenic | 45.0% | |
| AAGTCTCAAGCTGTTCGAAG+TGG | + | chr3_2:70958625-70958644 | Msa0421920:CDS | 45.0% | |
| !! | AAGGTATTTTCACGAGGCCA+TGG | - | chr3_2:70958856-70958875 | None:intergenic | 45.0% |
| TGCTCTACAAATTCGTCAGG+GGG | - | chr3_2:70956750-70956769 | None:intergenic | 45.0% | |
| CTGCTCTACAAATTCGTCAG+GGG | - | chr3_2:70956751-70956770 | None:intergenic | 45.0% | |
| GCTGCTCTACAAATTCGTCA+GGG | - | chr3_2:70956752-70956771 | None:intergenic | 45.0% | |
| ACGAATTTGTAGAGCAGCCA+TGG | + | chr3_2:70956754-70956773 | Msa0421920:exon | 45.0% | |
| !! | CTCTTTGGAGTACTTCACCA+TGG | - | chr3_2:70956774-70956793 | None:intergenic | 45.0% |
| GATCAGCTATTCTGACAGCT+CGG | - | chr3_2:70957056-70957075 | None:intergenic | 45.0% | |
| ! | AGTGAATTTACGGGCCCTTT+TGG | + | chr3_2:70957077-70957096 | Msa0421920:intron | 45.0% |
| ! | ATTTACGGGCCCTTTTGGAT+TGG | + | chr3_2:70957082-70957101 | Msa0421920:intron | 45.0% |
| !! | ACCCACTTGATTTGCCATGA+TGG | + | chr3_2:70957692-70957711 | Msa0421920:intron | 45.0% |
| CACCATCATGGCAAATCAAG+TGG | - | chr3_2:70957697-70957716 | None:intergenic | 45.0% | |
| !! | TTGCCATGATGGTGTTGACT+TGG | + | chr3_2:70957703-70957722 | Msa0421920:intron | 45.0% |
| !! | TGCCATGATGGTGTTGACTT+GGG | + | chr3_2:70957704-70957723 | Msa0421920:intron | 45.0% |
| AACAAACCTGAGACCTTTGG+AGG | - | chr3_2:70957745-70957764 | None:intergenic | 45.0% | |
| GGAAACAAACCTGAGACCTT+TGG | - | chr3_2:70957748-70957767 | None:intergenic | 45.0% | |
| CCACCAAATTTGACACCAAG+GGG | - | chr3_2:70957769-70957788 | None:intergenic | 45.0% | |
| GTCCACCAAATTTGACACCA+AGG | - | chr3_2:70957771-70957790 | None:intergenic | 45.0% | |
| !!! | AGATGTTTTGGCCCACAAAC+AGG | + | chr3_2:70957950-70957969 | Msa0421920:CDS | 45.0% |
| GAAAGGAATGGCCTGTTTGT+GGG | - | chr3_2:70957964-70957983 | None:intergenic | 45.0% | |
| TGAAAGGAATGGCCTGTTTG+TGG | - | chr3_2:70957965-70957984 | None:intergenic | 45.0% | |
| ! | AACAGACACTCTAATGGGCA+AGG | + | chr3_2:70958026-70958045 | Msa0421920:CDS | 45.0% |
| CTAGGTGAAAGGTTTGGATG+TGG | + | chr3_2:70958237-70958256 | Msa0421920:intron | 45.0% | |
| TCTCTACGTGTCTCATATCC+AGG | + | chr3_2:70958264-70958283 | Msa0421920:CDS | 45.0% | |
| AGTATCAGTTCGATGTGGCA+AGG | - | chr3_2:70958458-70958477 | None:intergenic | 45.0% | |
| AAGTCTCAAGCTGTTCGAAG+TGG | + | chr3_2:70958625-70958644 | Msa0421920:CDS | 45.0% | |
| !! | AAGGTATTTTCACGAGGCCA+TGG | - | chr3_2:70958856-70958875 | None:intergenic | 45.0% |
| TGAACTCGATTGTGGGAAGG+AGG | - | chr3_2:70956727-70956746 | None:intergenic | 50.0% | |
| GGCTGCTCTACAAATTCGTC+AGG | - | chr3_2:70956753-70956772 | None:intergenic | 50.0% | |
| !! | GCCATGATGGTGTTGACTTG+GGG | + | chr3_2:70957705-70957724 | Msa0421920:intron | 50.0% |
| ! | GTCTCAGGTTTGTTTCCCCT+TGG | + | chr3_2:70957751-70957770 | Msa0421920:intron | 50.0% |
| !! | CCCCTTGGTGTCAAATTTGG+TGG | + | chr3_2:70957766-70957785 | Msa0421920:intron | 50.0% |
| CCACGACAGAAACGTCTGAA+AGG | - | chr3_2:70957981-70958000 | None:intergenic | 50.0% | |
| CCTTTCAGACGTTTCTGTCG+TGG | + | chr3_2:70957978-70957997 | Msa0421920:CDS | 50.0% | |
| AGACGTTTCTGTCGTGGTGT+TGG | + | chr3_2:70957984-70958003 | Msa0421920:CDS | 50.0% | |
| GACGTTTCTGTCGTGGTGTT+GGG | + | chr3_2:70957985-70958004 | Msa0421920:CDS | 50.0% | |
| GATTCTTCCATGAGCCCTGT+AGG | - | chr3_2:70958320-70958339 | None:intergenic | 50.0% | |
| GTGGCAAGGAGATGACATGT+AGG | - | chr3_2:70958444-70958463 | None:intergenic | 50.0% | |
| TTTGTTGCCAACTGGGTCTC+GGG | - | chr3_2:70958598-70958617 | None:intergenic | 50.0% | |
| ! | GTTTGTTGCCAACTGGGTCT+CGG | - | chr3_2:70958599-70958618 | None:intergenic | 50.0% |
| TGAACTCGATTGTGGGAAGG+AGG | - | chr3_2:70956727-70956746 | None:intergenic | 50.0% | |
| GGCTGCTCTACAAATTCGTC+AGG | - | chr3_2:70956753-70956772 | None:intergenic | 50.0% | |
| !! | GCCATGATGGTGTTGACTTG+GGG | + | chr3_2:70957705-70957724 | Msa0421920:intron | 50.0% |
| ! | GTCTCAGGTTTGTTTCCCCT+TGG | + | chr3_2:70957751-70957770 | Msa0421920:intron | 50.0% |
| !! | CCCCTTGGTGTCAAATTTGG+TGG | + | chr3_2:70957766-70957785 | Msa0421920:intron | 50.0% |
| CCACGACAGAAACGTCTGAA+AGG | - | chr3_2:70957981-70958000 | None:intergenic | 50.0% | |
| CCTTTCAGACGTTTCTGTCG+TGG | + | chr3_2:70957978-70957997 | Msa0421920:CDS | 50.0% | |
| AGACGTTTCTGTCGTGGTGT+TGG | + | chr3_2:70957984-70958003 | Msa0421920:CDS | 50.0% | |
| GACGTTTCTGTCGTGGTGTT+GGG | + | chr3_2:70957985-70958004 | Msa0421920:CDS | 50.0% | |
| GATTCTTCCATGAGCCCTGT+AGG | - | chr3_2:70958320-70958339 | None:intergenic | 50.0% | |
| GTGGCAAGGAGATGACATGT+AGG | - | chr3_2:70958444-70958463 | None:intergenic | 50.0% | |
| TTTGTTGCCAACTGGGTCTC+GGG | - | chr3_2:70958598-70958617 | None:intergenic | 50.0% | |
| ! | GTTTGTTGCCAACTGGGTCT+CGG | - | chr3_2:70958599-70958618 | None:intergenic | 50.0% |
| GGGTGAACTCGATTGTGGGA+AGG | - | chr3_2:70956730-70956749 | None:intergenic | 55.0% | |
| CAGGGGGTGAACTCGATTGT+GGG | - | chr3_2:70956734-70956753 | None:intergenic | 55.0% | |
| TCAGGGGGTGAACTCGATTG+TGG | - | chr3_2:70956735-70956754 | None:intergenic | 55.0% | |
| ATTGCAGCAACCAAGGCCAG+AGG | + | chr3_2:70956912-70956931 | Msa0421920:intron | 55.0% | |
| AACCCTAAGGTCAGCACCTC+TGG | - | chr3_2:70956931-70956950 | None:intergenic | 55.0% | |
| GCCCCAAGTCAACACCATCA+TGG | - | chr3_2:70957709-70957728 | None:intergenic | 55.0% | |
| !! | ATGGTGTTGACTTGGGGCCT+TGG | + | chr3_2:70957711-70957730 | Msa0421920:intron | 55.0% |
| !! | CTTTGGAGGAGCACTCTCCA+AGG | - | chr3_2:70957731-70957750 | None:intergenic | 55.0% |
| !! | CTTGGAGAGTGCTCCTCCAA+AGG | + | chr3_2:70957729-70957748 | Msa0421920:intron | 55.0% |
| AGTGCTCCTCCAAAGGTCTC+AGG | + | chr3_2:70957736-70957755 | Msa0421920:intron | 55.0% | |
| ! | GATGGCAAACGCTGTTTCCC+TGG | - | chr3_2:70957892-70957911 | None:intergenic | 55.0% |
| GGGAAACAGCGTTTGCCATC+AGG | + | chr3_2:70957892-70957911 | Msa0421920:CDS | 55.0% | |
| ! | GTTTCTGTCGTGGTGTTGGG+AGG | + | chr3_2:70957988-70958007 | Msa0421920:CDS | 55.0% |
| ! | ACTCTAATGGGCAAGGACGC+TGG | + | chr3_2:70958033-70958052 | Msa0421920:CDS | 55.0% |
| AGACGTACCTACAGGGCTCA+TGG | + | chr3_2:70958310-70958329 | Msa0421920:CDS | 55.0% | |
| GGAAGAGGCTGTCCAGAAAG+AGG | + | chr3_2:70958487-70958506 | Msa0421920:CDS | 55.0% | |
| GGGTGAACTCGATTGTGGGA+AGG | - | chr3_2:70956730-70956749 | None:intergenic | 55.0% | |
| CAGGGGGTGAACTCGATTGT+GGG | - | chr3_2:70956734-70956753 | None:intergenic | 55.0% | |
| TCAGGGGGTGAACTCGATTG+TGG | - | chr3_2:70956735-70956754 | None:intergenic | 55.0% | |
| ATTGCAGCAACCAAGGCCAG+AGG | + | chr3_2:70956912-70956931 | Msa0421920:intron | 55.0% | |
| AACCCTAAGGTCAGCACCTC+TGG | - | chr3_2:70956931-70956950 | None:intergenic | 55.0% | |
| GCCCCAAGTCAACACCATCA+TGG | - | chr3_2:70957709-70957728 | None:intergenic | 55.0% | |
| !! | ATGGTGTTGACTTGGGGCCT+TGG | + | chr3_2:70957711-70957730 | Msa0421920:intron | 55.0% |
| !! | CTTTGGAGGAGCACTCTCCA+AGG | - | chr3_2:70957731-70957750 | None:intergenic | 55.0% |
| !! | CTTGGAGAGTGCTCCTCCAA+AGG | + | chr3_2:70957729-70957748 | Msa0421920:intron | 55.0% |
| AGTGCTCCTCCAAAGGTCTC+AGG | + | chr3_2:70957736-70957755 | Msa0421920:intron | 55.0% | |
| ! | GATGGCAAACGCTGTTTCCC+TGG | - | chr3_2:70957892-70957911 | None:intergenic | 55.0% |
| GGGAAACAGCGTTTGCCATC+AGG | + | chr3_2:70957892-70957911 | Msa0421920:CDS | 55.0% | |
| ! | GTTTCTGTCGTGGTGTTGGG+AGG | + | chr3_2:70957988-70958007 | Msa0421920:CDS | 55.0% |
| ! | ACTCTAATGGGCAAGGACGC+TGG | + | chr3_2:70958033-70958052 | Msa0421920:CDS | 55.0% |
| AGACGTACCTACAGGGCTCA+TGG | + | chr3_2:70958310-70958329 | Msa0421920:CDS | 55.0% | |
| GGAAGAGGCTGTCCAGAAAG+AGG | + | chr3_2:70958487-70958506 | Msa0421920:CDS | 55.0% | |
| GGTGGGATTGTCGGGCTCTT+TGG | - | chr3_2:70956789-70956808 | None:intergenic | 60.0% | |
| AAGGTCAGCACCTCTGGCCT+TGG | - | chr3_2:70956925-70956944 | None:intergenic | 60.0% | |
| !! | AGGCCAGAGGTGCTGACCTT+AGG | + | chr3_2:70956925-70956944 | Msa0421920:CDS | 60.0% |
| !! | GGCCAGAGGTGCTGACCTTA+GGG | + | chr3_2:70956926-70956945 | Msa0421920:CDS | 60.0% |
| GGTCAGGGGCAACTTCCTGA+TGG | - | chr3_2:70957910-70957929 | None:intergenic | 60.0% | |
| TCTGTAGCCCGAGACCCAGT+TGG | + | chr3_2:70958588-70958607 | Msa0421920:intron | 60.0% | |
| GGTGGGATTGTCGGGCTCTT+TGG | - | chr3_2:70956789-70956808 | None:intergenic | 60.0% | |
| AAGGTCAGCACCTCTGGCCT+TGG | - | chr3_2:70956925-70956944 | None:intergenic | 60.0% | |
| !! | AGGCCAGAGGTGCTGACCTT+AGG | + | chr3_2:70956925-70956944 | Msa0421920:CDS | 60.0% |
| !! | GGCCAGAGGTGCTGACCTTA+GGG | + | chr3_2:70956926-70956945 | Msa0421920:CDS | 60.0% |
| GGTCAGGGGCAACTTCCTGA+TGG | - | chr3_2:70957910-70957929 | None:intergenic | 60.0% | |
| TCTGTAGCCCGAGACCCAGT+TGG | + | chr3_2:70958588-70958607 | Msa0421920:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 70956695 | 70958910 | 70956695 | ID=Msa0421920;Name=Msa0421920 |
| chr3_2 | mRNA | 70956695 | 70958910 | 70956695 | ID=Msa0421920-mRNA-1;Parent=Msa0421920;Name=Msa0421920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=78|1|1|1|1|1|6|250|182 |
| chr3_2 | exon | 70956695 | 70956812 | 70956695 | ID=Msa0421920-mRNA-1:exon:17143;Parent=Msa0421920-mRNA-1 |
| chr3_2 | exon | 70956919 | 70956959 | 70956919 | ID=Msa0421920-mRNA-1:exon:17144;Parent=Msa0421920-mRNA-1 |
| chr3_2 | exon | 70957885 | 70958115 | 70957885 | ID=Msa0421920-mRNA-1:exon:17145;Parent=Msa0421920-mRNA-1 |
| chr3_2 | exon | 70958241 | 70958343 | 70958241 | ID=Msa0421920-mRNA-1:exon:17146;Parent=Msa0421920-mRNA-1 |
| chr3_2 | exon | 70958441 | 70958508 | 70958441 | ID=Msa0421920-mRNA-1:exon:17147;Parent=Msa0421920-mRNA-1 |
| chr3_2 | exon | 70958595 | 70958910 | 70958595 | ID=Msa0421920-mRNA-1:exon:17148;Parent=Msa0421920-mRNA-1 |
| chr3_2 | five_prime_UTR | 70956695 | 70956772 | 70956695 | ID=Msa0421920-mRNA-1:five_prime_utr;Parent=Msa0421920-mRNA-1 |
| chr3_2 | CDS | 70956773 | 70956812 | 70956773 | ID=Msa0421920-mRNA-1:cds;Parent=Msa0421920-mRNA-1 |
| chr3_2 | CDS | 70956919 | 70956959 | 70956919 | ID=Msa0421920-mRNA-1:cds;Parent=Msa0421920-mRNA-1 |
| chr3_2 | CDS | 70957885 | 70958115 | 70957885 | ID=Msa0421920-mRNA-1:cds;Parent=Msa0421920-mRNA-1 |
| chr3_2 | CDS | 70958241 | 70958343 | 70958241 | ID=Msa0421920-mRNA-1:cds;Parent=Msa0421920-mRNA-1 |
| chr3_2 | CDS | 70958441 | 70958508 | 70958441 | ID=Msa0421920-mRNA-1:cds;Parent=Msa0421920-mRNA-1 |
| chr3_2 | CDS | 70958595 | 70958660 | 70958595 | ID=Msa0421920-mRNA-1:cds;Parent=Msa0421920-mRNA-1 |
| chr3_2 | three_prime_UTR | 70958661 | 70958910 | 70958661 | ID=Msa0421920-mRNA-1:three_prime_utr;Parent=Msa0421920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
