AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165700 MtrunA17_Chr7g0269451 100.000 188 0 0 1 188 1 188 1.64e-134 374
Msa1165700 MtrunA17_Chr1g0192271 91.489 188 15 1 1 188 1 187 8.09e-122 342
Msa1165700 MtrunA17_Chr7g0272381 86.702 188 24 1 1 188 1 187 6.74e-117 329
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165700 AT5G27850.1 84.574 188 28 1 1 188 1 187 2.34e-113 320
Msa1165700 AT3G05590.1 83.511 188 30 1 1 188 1 187 3.75e-111 315
Msa1165700 AT2G47570.1 77.540 187 40 2 3 188 1 186 9.79e-101 288
Msa1165700 AT5G27850.2 82.963 135 22 1 54 188 1 134 1.24e-77 228
Msa1165700 AT3G05590.3 82.222 135 23 1 54 188 1 134 4.82e-77 227
Msa1165700 AT3G05590.2 82.222 135 23 1 54 188 1 134 4.82e-77 227

Find 84 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGGTACGTTTAGTCTTCT+TGG 0.192478 7_4:+57639606 None:intergenic
TTATGAAGTACCTGCAATTA+AGG 0.289178 7_4:-57638786 Msa1165700:CDS
CTGGCTCTTAGAGCTCCTTT+AGG 0.297513 7_4:-57638686 Msa1165700:CDS
AGGTAGATATCATTGGATTT+TGG 0.303386 7_4:+57639583 None:intergenic
TTGCACTTTAAATGCAATAT+AGG 0.304283 7_4:+57637520 None:intergenic
AGCCACCACTATCACTTTCT+AGG 0.308293 7_4:-57639362 Msa1165700:CDS
TGGCTCTTAGAGCTCCTTTA+GGG 0.321716 7_4:-57638685 Msa1165700:CDS
TGATAATGAGATATGATAAT+AGG 0.329129 7_4:+57637824 None:intergenic
GTGCCGTGACAGATGACATT+AGG 0.331949 7_4:-57638811 Msa1165700:CDS
ATGTTTCAGGTTCTTCTTAG+AGG 0.334993 7_4:-57638024 Msa1165700:intron
GACTGAAAGTAATTTCAATA+AGG 0.349360 7_4:-57639421 Msa1165700:CDS
AGGCTTTAAAGTTTGAGTTT+TGG 0.349919 7_4:-57637869 Msa1165700:exon
CTGCGGCCGAACGAGAGAAA+TGG 0.359660 7_4:+57639778 None:intergenic
AGAGCAGTTACCTTAATTGC+AGG 0.362185 7_4:+57638776 None:intergenic
TTATTTGAGTTTAAAGTAGT+AGG 0.365650 7_4:-57637562 Msa1165700:three_prime_UTR
TCAATAAGGTTATCCTTAAG+AGG 0.371127 7_4:-57639407 Msa1165700:CDS
TGCGGCCGAACGAGAGAAAT+GGG 0.372708 7_4:+57639779 None:intergenic
TGCTCATGAAAAGCCTCTTA+AGG 0.380870 7_4:+57639394 None:intergenic
TTGAAGCCGCTAGAGGAAAA+AGG 0.383923 7_4:-57637900 Msa1165700:CDS
CTACCTCAAGCTTCTCGTTA+AGG 0.389550 7_4:-57639566 Msa1165700:intron
TGCCGTGACAGATGACATTA+GGG 0.403697 7_4:-57638810 Msa1165700:CDS
CAATTAAGGTAACTGCTCTA+AGG 0.406837 7_4:-57638772 Msa1165700:CDS
AAGCTTGAGGTAGATATCAT+TGG 0.411467 7_4:+57639576 None:intergenic
GTGCCTCACCTTTGATCAGC+TGG 0.415929 7_4:-57638705 Msa1165700:CDS
TCTTGTGCGCTCGTAGTGTT+GGG 0.441971 7_4:-57637617 Msa1165700:three_prime_UTR
TTCTTGTGCGCTCGTAGTGT+TGG 0.445083 7_4:-57637618 Msa1165700:three_prime_UTR
TCCTTCTCCCCAAGTGGAAA+AGG 0.454454 7_4:-57637737 Msa1165700:three_prime_UTR
ATTAAACATCTCTGACACTA+AGG 0.464619 7_4:-57637456 Msa1165700:three_prime_UTR
GGTAAGATTGCCGTAGTTGT+TGG 0.465007 7_4:-57638833 Msa1165700:CDS
TGCTCTAAGGTTCACCGAAA+AGG 0.469427 7_4:-57638759 Msa1165700:CDS
TTCGCAGGGTATCGATTTGA+AGG 0.470824 7_4:-57639641 Msa1165700:intron
CTAGCCCCATTTCTCTCGTT+CGG 0.479520 7_4:-57639784 Msa1165700:five_prime_UTR
AAGCACTTTGGACGAGCTCC+TGG 0.482073 7_4:-57637976 Msa1165700:CDS
CGTGAGGCTGTCAAGCACTT+TGG 0.482505 7_4:-57637988 Msa1165700:CDS
CAGGGTATCGATTTGAAGGC+AGG 0.483139 7_4:-57639637 Msa1165700:CDS
TAAGGTTCACCGAAAAGGCC+AGG 0.486544 7_4:-57638754 Msa1165700:CDS
GTGCGCTCGTAGTGTTGGGA+AGG 0.487077 7_4:-57637613 Msa1165700:three_prime_UTR
CATACCGTGTTCTGCCCTAA+AGG 0.491830 7_4:+57638671 None:intergenic
CGCTCGTAGTGTTGGGAAGG+GGG 0.492651 7_4:-57637610 Msa1165700:three_prime_UTR
CCAAGTGGAAAAGGAATGAA+TGG 0.497670 7_4:-57637728 Msa1165700:three_prime_UTR
AGCCTTCTCAATTCTAGCCC+TGG 0.500353 7_4:+57638736 None:intergenic
GCGATTATATACCTTTCCCT+TGG 0.506650 7_4:+57639326 None:intergenic
CGAACGAGAGAAATGGGGCT+AGG 0.509790 7_4:+57639785 None:intergenic
ATTGTTCACAACACCACAAA+GGG 0.510119 7_4:+57637777 None:intergenic
TGAGATATGATAATAGGAAA+GGG 0.512617 7_4:+57637830 None:intergenic
GCGCTCGTAGTGTTGGGAAG+GGG 0.517946 7_4:-57637611 Msa1165700:three_prime_UTR
TGCGCTCGTAGTGTTGGGAA+GGG 0.527136 7_4:-57637612 Msa1165700:three_prime_UTR
CAGTCCTTCGAACAAGGAAA+CGG 0.531384 7_4:+57639439 None:intergenic
TGGAAAAGGAATGAATGGAT+TGG 0.540570 7_4:-57637723 Msa1165700:three_prime_UTR
ATGAGATATGATAATAGGAA+AGG 0.543603 7_4:+57637829 None:intergenic
TACTTTCAGTCCTTCGAACA+AGG 0.547564 7_4:+57639433 None:intergenic
ATCAACCTAGAAAGTGATAG+TGG 0.548653 7_4:+57639357 None:intergenic
CTAGAATTGAGAAGGCTGGT+GGG 0.553032 7_4:-57638730 Msa1165700:CDS
AGGTTGATTCGTTACACCAA+GGG 0.558600 7_4:-57639342 Msa1165700:CDS
AAAGTGCTTGACAGCCTCAC+GGG 0.558822 7_4:+57637990 None:intergenic
GAACGAGAGAAATGGGGCTA+GGG 0.565419 7_4:+57639786 None:intergenic
GATTCGTTACACCAAGGGAA+AGG 0.565427 7_4:-57639337 Msa1165700:intron
TATACCGTTTCCTTGTTCGA+AGG 0.566828 7_4:-57639443 Msa1165700:CDS
TTAAACATCTCTGACACTAA+GGG 0.569827 7_4:-57637455 Msa1165700:three_prime_UTR
GTGTTGCTGTGTGGAACACC+AGG 0.574552 7_4:+57637958 None:intergenic
AGGGCTAGAATTGAGAAGGC+TGG 0.575107 7_4:-57638734 Msa1165700:CDS
CAAAGTGCTTGACAGCCTCA+CGG 0.580659 7_4:+57637989 None:intergenic
CGAAAGGTTGAAGCCGCTAG+AGG 0.583684 7_4:-57637907 Msa1165700:CDS
GCTAGAATTGAGAAGGCTGG+TGG 0.586828 7_4:-57638731 Msa1165700:CDS
TCTAAGAGCCAGCTGATCAA+AGG 0.589919 7_4:+57638697 None:intergenic
TAGAATTGAGAAGGCTGGTG+GGG 0.601753 7_4:-57638729 Msa1165700:CDS
GAAGCTTCTTCTTCTAGCTG+CGG 0.601908 7_4:+57639761 None:intergenic
TGTCACGGCACCAACAACTA+CGG 0.603846 7_4:+57638823 None:intergenic
TTAGCGTCCTTCTCCCCAAG+TGG 0.609019 7_4:-57637743 Msa1165700:three_prime_UTR
AACCCTAATGTCATCTGTCA+CGG 0.612086 7_4:+57638808 None:intergenic
GGCCAGGGCTAGAATTGAGA+AGG 0.617622 7_4:-57638738 Msa1165700:CDS
AGCTCCTTTAGGGCAGAACA+CGG 0.621376 7_4:-57638675 Msa1165700:intron
AACACTAAGCCCTATGTCCG+TGG 0.624133 7_4:-57637940 Msa1165700:CDS
AAGGTTCACCGAAAAGGCCA+GGG 0.631182 7_4:-57638753 Msa1165700:CDS
ATACCTTAACGAGAAGCTTG+AGG 0.643723 7_4:+57639563 None:intergenic
TAGGTTGATTCGTTACACCA+AGG 0.646840 7_4:-57639343 Msa1165700:CDS
AATTGTTCACAACACCACAA+AGG 0.654715 7_4:+57637776 None:intergenic
AACCTAGAAAGTGATAGTGG+TGG 0.668105 7_4:+57639360 None:intergenic
AAGAAGAAGCTTCTTCACCA+TGG 0.669291 7_4:-57639751 Msa1165700:intron
GGGGAGTTGAACTTGAAGCA+GGG 0.669854 7_4:-57637591 Msa1165700:three_prime_UTR
GAGCCAGCTGATCAAAGGTG+AGG 0.684975 7_4:+57638702 None:intergenic
GCGGCCGAACGAGAGAAATG+GGG 0.685446 7_4:+57639780 None:intergenic
GGTATCGATTTGAAGGCAGG+AGG 0.701621 7_4:-57639634 Msa1165700:CDS
TAGGGCTTAGTGTTGCTGTG+TGG 0.715711 7_4:+57637949 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTTGTATTTATAACAA+AGG - chr7_4:57637983-57638002 Msa1165700:CDS 15.0%
!!! TTTACTTTGTTTTGAAATAT+TGG - chr7_4:57638879-57638898 Msa1165700:intron 15.0%
!!! TGGTAAACATATTATTTTAT+AGG + chr7_4:57638967-57638986 None:intergenic 15.0%
!! ATAAGTTGTATTTATAACAA+AGG - chr7_4:57637983-57638002 Msa1165700:CDS 15.0%
!!! TTTACTTTGTTTTGAAATAT+TGG - chr7_4:57638879-57638898 Msa1165700:intron 15.0%
!!! TGGTAAACATATTATTTTAT+AGG + chr7_4:57638967-57638986 None:intergenic 15.0%
!! ATGCAATAGCTTATAAAAAT+GGG - chr7_4:57638083-57638102 Msa1165700:intron 20.0%
!! AAAAAAAAAGCCTATAACAT+GGG + chr7_4:57638248-57638267 None:intergenic 20.0%
!! TAAAAAAAAAGCCTATAACA+TGG + chr7_4:57638249-57638268 None:intergenic 20.0%
!!! TGTTATGAACTTTTAATCTT+TGG + chr7_4:57638712-57638731 None:intergenic 20.0%
!!! TATTATTTTATAGGCTGTAT+TGG + chr7_4:57638958-57638977 None:intergenic 20.0%
!! TACTAAAGCAAAATAAAAAC+AGG + chr7_4:57639006-57639025 None:intergenic 20.0%
!! TAAAAAAAGGCAACAAAAAT+AGG + chr7_4:57639108-57639127 None:intergenic 20.0%
!! CCTAAAGTTGTAATAAAAAA+AGG + chr7_4:57639121-57639140 None:intergenic 20.0%
!!! CCTTTTTTTATTACAACTTT+AGG - chr7_4:57639118-57639137 Msa1165700:intron 20.0%
!!! TTTTCTTGTATTAATGTTTC+AGG - chr7_4:57639216-57639235 Msa1165700:intron 20.0%
!!! TGATAATGAGATATGATAAT+AGG + chr7_4:57639432-57639451 None:intergenic 20.0%
!!! TTATTTGAGTTTAAAGTAGT+AGG - chr7_4:57639691-57639710 Msa1165700:intron 20.0%
!!! CAATTTTATATGTCATTTGT+GGG - chr7_4:57639753-57639772 Msa1165700:exon 20.0%
!! ATGCAATAGCTTATAAAAAT+GGG - chr7_4:57638083-57638102 Msa1165700:intron 20.0%
!! AAAAAAAAAGCCTATAACAT+GGG + chr7_4:57638248-57638267 None:intergenic 20.0%
!! TAAAAAAAAAGCCTATAACA+TGG + chr7_4:57638249-57638268 None:intergenic 20.0%
!!! TGTTATGAACTTTTAATCTT+TGG + chr7_4:57638712-57638731 None:intergenic 20.0%
!!! TATTATTTTATAGGCTGTAT+TGG + chr7_4:57638958-57638977 None:intergenic 20.0%
!! TACTAAAGCAAAATAAAAAC+AGG + chr7_4:57639006-57639025 None:intergenic 20.0%
!! TAAAAAAAGGCAACAAAAAT+AGG + chr7_4:57639108-57639127 None:intergenic 20.0%
!! CCTAAAGTTGTAATAAAAAA+AGG + chr7_4:57639121-57639140 None:intergenic 20.0%
!!! CCTTTTTTTATTACAACTTT+AGG - chr7_4:57639118-57639137 Msa1165700:intron 20.0%
!!! TTTTCTTGTATTAATGTTTC+AGG - chr7_4:57639216-57639235 Msa1165700:intron 20.0%
!!! TGATAATGAGATATGATAAT+AGG + chr7_4:57639432-57639451 None:intergenic 20.0%
!!! TTATTTGAGTTTAAAGTAGT+AGG - chr7_4:57639691-57639710 Msa1165700:intron 20.0%
!!! CAATTTTATATGTCATTTGT+GGG - chr7_4:57639753-57639772 Msa1165700:exon 20.0%
! GTTATTGTGAATCTGAATAA+TGG - chr7_4:57637736-57637755 Msa1165700:three_prime_UTR 25.0%
! GACTGAAAGTAATTTCAATA+AGG - chr7_4:57637832-57637851 Msa1165700:three_prime_UTR 25.0%
! GATGCAATAGCTTATAAAAA+TGG - chr7_4:57638082-57638101 Msa1165700:intron 25.0%
!!! TCACTTTTTTTCTTTCTTTC+TGG - chr7_4:57638388-57638407 Msa1165700:intron 25.0%
!!! TTTTCTTTCTTTCTGGTATT+AGG - chr7_4:57638395-57638414 Msa1165700:intron 25.0%
!!! TTGCTGTAATTTTAGAAGTT+TGG - chr7_4:57638664-57638683 Msa1165700:intron 25.0%
!!! AATTTTAGAAGTTTGGAAGT+TGG - chr7_4:57638671-57638690 Msa1165700:intron 25.0%
! AATGACTAGAATGATAAATG+TGG - chr7_4:57638837-57638856 Msa1165700:CDS 25.0%
! ACAAAGTAAAACAAAAACAC+AGG + chr7_4:57638869-57638888 None:intergenic 25.0%
!! CAGAAAGTATAACAGTTATA+AGG + chr7_4:57638933-57638952 None:intergenic 25.0%
!! TTATTACAACTTTAGGAGAA+AGG - chr7_4:57639125-57639144 Msa1165700:intron 25.0%
! TGAGATATGATAATAGGAAA+GGG + chr7_4:57639426-57639445 None:intergenic 25.0%
! ATGAGATATGATAATAGGAA+AGG + chr7_4:57639427-57639446 None:intergenic 25.0%
! TTGCACTTTAAATGCAATAT+AGG + chr7_4:57639736-57639755 None:intergenic 25.0%
!!! GCAATTTTATATGTCATTTG+TGG - chr7_4:57639752-57639771 Msa1165700:exon 25.0%
! GTTATTGTGAATCTGAATAA+TGG - chr7_4:57637736-57637755 Msa1165700:three_prime_UTR 25.0%
! GACTGAAAGTAATTTCAATA+AGG - chr7_4:57637832-57637851 Msa1165700:three_prime_UTR 25.0%
! GATGCAATAGCTTATAAAAA+TGG - chr7_4:57638082-57638101 Msa1165700:intron 25.0%
!!! TCACTTTTTTTCTTTCTTTC+TGG - chr7_4:57638388-57638407 Msa1165700:intron 25.0%
!!! TTTTCTTTCTTTCTGGTATT+AGG - chr7_4:57638395-57638414 Msa1165700:intron 25.0%
!!! TTGCTGTAATTTTAGAAGTT+TGG - chr7_4:57638664-57638683 Msa1165700:intron 25.0%
!!! AATTTTAGAAGTTTGGAAGT+TGG - chr7_4:57638671-57638690 Msa1165700:intron 25.0%
! AATGACTAGAATGATAAATG+TGG - chr7_4:57638837-57638856 Msa1165700:CDS 25.0%
! ACAAAGTAAAACAAAAACAC+AGG + chr7_4:57638869-57638888 None:intergenic 25.0%
!! CAGAAAGTATAACAGTTATA+AGG + chr7_4:57638933-57638952 None:intergenic 25.0%
!! TTATTACAACTTTAGGAGAA+AGG - chr7_4:57639125-57639144 Msa1165700:intron 25.0%
! TGAGATATGATAATAGGAAA+GGG + chr7_4:57639426-57639445 None:intergenic 25.0%
! ATGAGATATGATAATAGGAA+AGG + chr7_4:57639427-57639446 None:intergenic 25.0%
! TTGCACTTTAAATGCAATAT+AGG + chr7_4:57639736-57639755 None:intergenic 25.0%
!!! GCAATTTTATATGTCATTTG+TGG - chr7_4:57639752-57639771 Msa1165700:exon 25.0%
TCGGAGTTAGTTATAAGAAA+TGG + chr7_4:57637561-57637580 None:intergenic 30.0%
! AGGTAGATATCATTGGATTT+TGG + chr7_4:57637673-57637692 None:intergenic 30.0%
CAAGAGTAGAAAATGAATGA+AGG + chr7_4:57637717-57637736 None:intergenic 30.0%
TCAATAAGGTTATCCTTAAG+AGG - chr7_4:57637846-57637865 Msa1165700:three_prime_UTR 30.0%
TAAGTTAGCATTTAGACTTC+TGG - chr7_4:57638052-57638071 Msa1165700:intron 30.0%
CTTGAACTATTATCTAGACT+GGG + chr7_4:57638109-57638128 None:intergenic 30.0%
TCAAATAAGCGAATCAAAAC+AGG - chr7_4:57638222-57638241 Msa1165700:intron 30.0%
! TGCATGTATGCTTTTAGATA+CGG - chr7_4:57638300-57638319 Msa1165700:intron 30.0%
!! GCTTTTAGATACGGTTTTAT+TGG - chr7_4:57638309-57638328 Msa1165700:intron 30.0%
! TTATGAAGTACCTGCAATTA+AGG - chr7_4:57638467-57638486 Msa1165700:intron 30.0%
CAATTGCATGAAGTTTAGTT+TGG + chr7_4:57638745-57638764 None:intergenic 30.0%
AAAACATGACTTCATACAAG+TGG + chr7_4:57638782-57638801 None:intergenic 30.0%
!! TTGTCTTAATTTGCAAAGAG+TGG + chr7_4:57639174-57639193 None:intergenic 30.0%
ATTAAGACAACATACATCTG+AGG - chr7_4:57639184-57639203 Msa1165700:intron 30.0%
!!! AGGCTTTAAAGTTTGAGTTT+TGG - chr7_4:57639384-57639403 Msa1165700:CDS 30.0%
ATTAAACATCTCTGACACTA+AGG - chr7_4:57639797-57639816 Msa1165700:five_prime_UTR 30.0%
TTAAACATCTCTGACACTAA+GGG - chr7_4:57639798-57639817 Msa1165700:five_prime_UTR 30.0%
TCGGAGTTAGTTATAAGAAA+TGG + chr7_4:57637561-57637580 None:intergenic 30.0%
! AGGTAGATATCATTGGATTT+TGG + chr7_4:57637673-57637692 None:intergenic 30.0%
CAAGAGTAGAAAATGAATGA+AGG + chr7_4:57637717-57637736 None:intergenic 30.0%
TCAATAAGGTTATCCTTAAG+AGG - chr7_4:57637846-57637865 Msa1165700:three_prime_UTR 30.0%
TAAGTTAGCATTTAGACTTC+TGG - chr7_4:57638052-57638071 Msa1165700:intron 30.0%
CTTGAACTATTATCTAGACT+GGG + chr7_4:57638109-57638128 None:intergenic 30.0%
TCAAATAAGCGAATCAAAAC+AGG - chr7_4:57638222-57638241 Msa1165700:intron 30.0%
! TGCATGTATGCTTTTAGATA+CGG - chr7_4:57638300-57638319 Msa1165700:intron 30.0%
!! GCTTTTAGATACGGTTTTAT+TGG - chr7_4:57638309-57638328 Msa1165700:intron 30.0%
! TTATGAAGTACCTGCAATTA+AGG - chr7_4:57638467-57638486 Msa1165700:intron 30.0%
CAATTGCATGAAGTTTAGTT+TGG + chr7_4:57638745-57638764 None:intergenic 30.0%
AAAACATGACTTCATACAAG+TGG + chr7_4:57638782-57638801 None:intergenic 30.0%
!! TTGTCTTAATTTGCAAAGAG+TGG + chr7_4:57639174-57639193 None:intergenic 30.0%
ATTAAGACAACATACATCTG+AGG - chr7_4:57639184-57639203 Msa1165700:intron 30.0%
!!! AGGCTTTAAAGTTTGAGTTT+TGG - chr7_4:57639384-57639403 Msa1165700:CDS 30.0%
ATTAAACATCTCTGACACTA+AGG - chr7_4:57639797-57639816 Msa1165700:five_prime_UTR 30.0%
TTAAACATCTCTGACACTAA+GGG - chr7_4:57639798-57639817 Msa1165700:five_prime_UTR 30.0%
!! GATATCATTGGATTTTGGTG+CGG + chr7_4:57637668-57637687 None:intergenic 35.0%
AAGCTTGAGGTAGATATCAT+TGG + chr7_4:57637680-57637699 None:intergenic 35.0%
ATCAACCTAGAAAGTGATAG+TGG + chr7_4:57637899-57637918 None:intergenic 35.0%
GCTTGAACTATTATCTAGAC+TGG + chr7_4:57638110-57638129 None:intergenic 35.0%
! ATAAGTATCGTACGAGTGTT+TGG + chr7_4:57638188-57638207 None:intergenic 35.0%
!! GGTTGATGAAGAGATAACAT+TGG - chr7_4:57638330-57638349 Msa1165700:intron 35.0%
! TCTTTCTTTCTGGTATTAGG+AGG - chr7_4:57638398-57638417 Msa1165700:intron 35.0%
! CTTTCTTTCTGGTATTAGGA+GGG - chr7_4:57638399-57638418 Msa1165700:intron 35.0%
CAATTAAGGTAACTGCTCTA+AGG - chr7_4:57638481-57638500 Msa1165700:intron 35.0%
GACTAGAATGATAAATGTGG+AGG - chr7_4:57638840-57638859 Msa1165700:intron 35.0%
! ACTTTTATACCTATCTGCTG+CGG - chr7_4:57639044-57639063 Msa1165700:intron 35.0%
! GCGGCAAATTAGATCAATTT+TGG - chr7_4:57639063-57639082 Msa1165700:intron 35.0%
!! ATGTTTCAGGTTCTTCTTAG+AGG - chr7_4:57639229-57639248 Msa1165700:intron 35.0%
!!! GATTTTTTTCCACGGACATA+GGG + chr7_4:57639325-57639344 None:intergenic 35.0%
!!! TGATTTTTTTCCACGGACAT+AGG + chr7_4:57639326-57639345 None:intergenic 35.0%
!!! CCTTTCGTGATTTTTTTCCA+CGG + chr7_4:57639333-57639352 None:intergenic 35.0%
!!! TGTTTTGTTTTCTCCCTTTG+TGG - chr7_4:57639463-57639482 Msa1165700:intron 35.0%
ATTGTTCACAACACCACAAA+GGG + chr7_4:57639479-57639498 None:intergenic 35.0%
AATTGTTCACAACACCACAA+AGG + chr7_4:57639480-57639499 None:intergenic 35.0%
! ATTCATTCCTTTTCCACTTG+GGG + chr7_4:57639526-57639545 None:intergenic 35.0%
! CATTCATTCCTTTTCCACTT+GGG + chr7_4:57639527-57639546 None:intergenic 35.0%
TGGAAAAGGAATGAATGGAT+TGG - chr7_4:57639530-57639549 Msa1165700:intron 35.0%
!!! TCATTTGTGGGTAGTTTTGT+AGG - chr7_4:57639765-57639784 Msa1165700:five_prime_UTR 35.0%
!!! CATTTGTGGGTAGTTTTGTA+GGG - chr7_4:57639766-57639785 Msa1165700:five_prime_UTR 35.0%
!! GATATCATTGGATTTTGGTG+CGG + chr7_4:57637668-57637687 None:intergenic 35.0%
AAGCTTGAGGTAGATATCAT+TGG + chr7_4:57637680-57637699 None:intergenic 35.0%
ATCAACCTAGAAAGTGATAG+TGG + chr7_4:57637899-57637918 None:intergenic 35.0%
GCTTGAACTATTATCTAGAC+TGG + chr7_4:57638110-57638129 None:intergenic 35.0%
! ATAAGTATCGTACGAGTGTT+TGG + chr7_4:57638188-57638207 None:intergenic 35.0%
!! GGTTGATGAAGAGATAACAT+TGG - chr7_4:57638330-57638349 Msa1165700:intron 35.0%
! TCTTTCTTTCTGGTATTAGG+AGG - chr7_4:57638398-57638417 Msa1165700:intron 35.0%
! CTTTCTTTCTGGTATTAGGA+GGG - chr7_4:57638399-57638418 Msa1165700:intron 35.0%
CAATTAAGGTAACTGCTCTA+AGG - chr7_4:57638481-57638500 Msa1165700:intron 35.0%
GACTAGAATGATAAATGTGG+AGG - chr7_4:57638840-57638859 Msa1165700:intron 35.0%
! ACTTTTATACCTATCTGCTG+CGG - chr7_4:57639044-57639063 Msa1165700:intron 35.0%
! GCGGCAAATTAGATCAATTT+TGG - chr7_4:57639063-57639082 Msa1165700:intron 35.0%
!! ATGTTTCAGGTTCTTCTTAG+AGG - chr7_4:57639229-57639248 Msa1165700:intron 35.0%
!!! GATTTTTTTCCACGGACATA+GGG + chr7_4:57639325-57639344 None:intergenic 35.0%
!!! TGATTTTTTTCCACGGACAT+AGG + chr7_4:57639326-57639345 None:intergenic 35.0%
!!! CCTTTCGTGATTTTTTTCCA+CGG + chr7_4:57639333-57639352 None:intergenic 35.0%
!!! TGTTTTGTTTTCTCCCTTTG+TGG - chr7_4:57639463-57639482 Msa1165700:intron 35.0%
ATTGTTCACAACACCACAAA+GGG + chr7_4:57639479-57639498 None:intergenic 35.0%
AATTGTTCACAACACCACAA+AGG + chr7_4:57639480-57639499 None:intergenic 35.0%
! ATTCATTCCTTTTCCACTTG+GGG + chr7_4:57639526-57639545 None:intergenic 35.0%
! CATTCATTCCTTTTCCACTT+GGG + chr7_4:57639527-57639546 None:intergenic 35.0%
TGGAAAAGGAATGAATGGAT+TGG - chr7_4:57639530-57639549 Msa1165700:intron 35.0%
!!! TCATTTGTGGGTAGTTTTGT+AGG - chr7_4:57639765-57639784 Msa1165700:five_prime_UTR 35.0%
!!! CATTTGTGGGTAGTTTTGTA+GGG - chr7_4:57639766-57639785 Msa1165700:five_prime_UTR 35.0%
AAGAAGAAGCTTCTTCACCA+TGG - chr7_4:57637502-57637521 Msa1165700:three_prime_UTR 40.0%
ATACCTTAACGAGAAGCTTG+AGG + chr7_4:57637693-57637712 None:intergenic 40.0%
TATACCGTTTCCTTGTTCGA+AGG - chr7_4:57637810-57637829 Msa1165700:three_prime_UTR 40.0%
TACTTTCAGTCCTTCGAACA+AGG + chr7_4:57637823-57637842 None:intergenic 40.0%
TGCTCATGAAAAGCCTCTTA+AGG + chr7_4:57637862-57637881 None:intergenic 40.0%
!! AACCTAGAAAGTGATAGTGG+TGG + chr7_4:57637896-57637915 None:intergenic 40.0%
!! TAGGTTGATTCGTTACACCA+AGG - chr7_4:57637910-57637929 Msa1165700:CDS 40.0%
!! AGGTTGATTCGTTACACCAA+GGG - chr7_4:57637911-57637930 Msa1165700:CDS 40.0%
GCGATTATATACCTTTCCCT+TGG + chr7_4:57637930-57637949 None:intergenic 40.0%
TCAAAACAGGCCCATGTTAT+AGG - chr7_4:57638235-57638254 Msa1165700:intron 40.0%
AACCCTAATGTCATCTGTCA+CGG + chr7_4:57638448-57638467 None:intergenic 40.0%
AGAGCAGTTACCTTAATTGC+AGG + chr7_4:57638480-57638499 None:intergenic 40.0%
! TTGGATAATGCTGTTGCTTG+CGG - chr7_4:57638898-57638917 Msa1165700:intron 40.0%
! CAGGAAGTACACTAGATTTG+TGG + chr7_4:57638987-57639006 None:intergenic 40.0%
CCGTGGAAAAAAATCACGAA+AGG - chr7_4:57639330-57639349 Msa1165700:intron 40.0%
! CCATTCATTCCTTTTCCACT+TGG + chr7_4:57639528-57639547 None:intergenic 40.0%
CCAAGTGGAAAAGGAATGAA+TGG - chr7_4:57639525-57639544 Msa1165700:intron 40.0%
AAGAAGAAGCTTCTTCACCA+TGG - chr7_4:57637502-57637521 Msa1165700:three_prime_UTR 40.0%
ATACCTTAACGAGAAGCTTG+AGG + chr7_4:57637693-57637712 None:intergenic 40.0%
TATACCGTTTCCTTGTTCGA+AGG - chr7_4:57637810-57637829 Msa1165700:three_prime_UTR 40.0%
TACTTTCAGTCCTTCGAACA+AGG + chr7_4:57637823-57637842 None:intergenic 40.0%
TGCTCATGAAAAGCCTCTTA+AGG + chr7_4:57637862-57637881 None:intergenic 40.0%
!! AACCTAGAAAGTGATAGTGG+TGG + chr7_4:57637896-57637915 None:intergenic 40.0%
!! TAGGTTGATTCGTTACACCA+AGG - chr7_4:57637910-57637929 Msa1165700:CDS 40.0%
!! AGGTTGATTCGTTACACCAA+GGG - chr7_4:57637911-57637930 Msa1165700:CDS 40.0%
GCGATTATATACCTTTCCCT+TGG + chr7_4:57637930-57637949 None:intergenic 40.0%
TCAAAACAGGCCCATGTTAT+AGG - chr7_4:57638235-57638254 Msa1165700:intron 40.0%
AACCCTAATGTCATCTGTCA+CGG + chr7_4:57638448-57638467 None:intergenic 40.0%
AGAGCAGTTACCTTAATTGC+AGG + chr7_4:57638480-57638499 None:intergenic 40.0%
! TTGGATAATGCTGTTGCTTG+CGG - chr7_4:57638898-57638917 Msa1165700:intron 40.0%
! CAGGAAGTACACTAGATTTG+TGG + chr7_4:57638987-57639006 None:intergenic 40.0%
CCGTGGAAAAAAATCACGAA+AGG - chr7_4:57639330-57639349 Msa1165700:intron 40.0%
! CCATTCATTCCTTTTCCACT+TGG + chr7_4:57639528-57639547 None:intergenic 40.0%
CCAAGTGGAAAAGGAATGAA+TGG - chr7_4:57639525-57639544 Msa1165700:intron 40.0%
!!! ATGGGGCTAGGGTTTTGTTT+AGG + chr7_4:57637459-57637478 None:intergenic 45.0%
! GAAGCTTCTTCTTCTAGCTG+CGG + chr7_4:57637495-57637514 None:intergenic 45.0%
TCCTCCTCTACAATCTCCAT+CGG - chr7_4:57637530-57637549 Msa1165700:three_prime_UTR 45.0%
AGAAAGAGGAGTGAGATGAG+AGG + chr7_4:57637587-57637606 None:intergenic 45.0%
! TCCTCTTTCTCTCTTTTCGC+AGG - chr7_4:57637597-57637616 Msa1165700:three_prime_UTR 45.0%
! CCTCTTTCTCTCTTTTCGCA+GGG - chr7_4:57637598-57637617 Msa1165700:three_prime_UTR 45.0%
!! TTCGCAGGGTATCGATTTGA+AGG - chr7_4:57637612-57637631 Msa1165700:three_prime_UTR 45.0%
! TGCGGTACGTTTAGTCTTCT+TGG + chr7_4:57637650-57637669 None:intergenic 45.0%
CTACCTCAAGCTTCTCGTTA+AGG - chr7_4:57637687-57637706 Msa1165700:three_prime_UTR 45.0%
CAGTCCTTCGAACAAGGAAA+CGG + chr7_4:57637817-57637836 None:intergenic 45.0%
AGCCACCACTATCACTTTCT+AGG - chr7_4:57637891-57637910 Msa1165700:CDS 45.0%
GATTCGTTACACCAAGGGAA+AGG - chr7_4:57637916-57637935 Msa1165700:CDS 45.0%
GGTAAGATTGCCGTAGTTGT+TGG - chr7_4:57638420-57638439 Msa1165700:intron 45.0%
TGCCGTGACAGATGACATTA+GGG - chr7_4:57638443-57638462 Msa1165700:intron 45.0%
!! TGCTCTAAGGTTCACCGAAA+AGG - chr7_4:57638494-57638513 Msa1165700:intron 45.0%
!! AATTCTAGCCCTGGCCTTTT+CGG + chr7_4:57638511-57638530 None:intergenic 45.0%
CTAGAATTGAGAAGGCTGGT+GGG - chr7_4:57638523-57638542 Msa1165700:intron 45.0%
TAGAATTGAGAAGGCTGGTG+GGG - chr7_4:57638524-57638543 Msa1165700:intron 45.0%
TCTAAGAGCCAGCTGATCAA+AGG + chr7_4:57638559-57638578 None:intergenic 45.0%
TGGCTCTTAGAGCTCCTTTA+GGG - chr7_4:57638568-57638587 Msa1165700:intron 45.0%
! TCTAATTTGCCGCAGCAGAT+AGG + chr7_4:57639056-57639075 None:intergenic 45.0%
TTGAAGCCGCTAGAGGAAAA+AGG - chr7_4:57639353-57639372 Msa1165700:CDS 45.0%
! GCTCTTCCTTTTTCCTCTAG+CGG + chr7_4:57639362-57639381 None:intergenic 45.0%
AGAGGAAAAAGGAAGAGCAG+AGG - chr7_4:57639364-57639383 Msa1165700:CDS 45.0%
!!! ATGGGGCTAGGGTTTTGTTT+AGG + chr7_4:57637459-57637478 None:intergenic 45.0%
! GAAGCTTCTTCTTCTAGCTG+CGG + chr7_4:57637495-57637514 None:intergenic 45.0%
TCCTCCTCTACAATCTCCAT+CGG - chr7_4:57637530-57637549 Msa1165700:three_prime_UTR 45.0%
AGAAAGAGGAGTGAGATGAG+AGG + chr7_4:57637587-57637606 None:intergenic 45.0%
! TCCTCTTTCTCTCTTTTCGC+AGG - chr7_4:57637597-57637616 Msa1165700:three_prime_UTR 45.0%
! CCTCTTTCTCTCTTTTCGCA+GGG - chr7_4:57637598-57637617 Msa1165700:three_prime_UTR 45.0%
!! TTCGCAGGGTATCGATTTGA+AGG - chr7_4:57637612-57637631 Msa1165700:three_prime_UTR 45.0%
! TGCGGTACGTTTAGTCTTCT+TGG + chr7_4:57637650-57637669 None:intergenic 45.0%
CTACCTCAAGCTTCTCGTTA+AGG - chr7_4:57637687-57637706 Msa1165700:three_prime_UTR 45.0%
CAGTCCTTCGAACAAGGAAA+CGG + chr7_4:57637817-57637836 None:intergenic 45.0%
AGCCACCACTATCACTTTCT+AGG - chr7_4:57637891-57637910 Msa1165700:CDS 45.0%
GATTCGTTACACCAAGGGAA+AGG - chr7_4:57637916-57637935 Msa1165700:CDS 45.0%
GGTAAGATTGCCGTAGTTGT+TGG - chr7_4:57638420-57638439 Msa1165700:intron 45.0%
TGCCGTGACAGATGACATTA+GGG - chr7_4:57638443-57638462 Msa1165700:intron 45.0%
!! TGCTCTAAGGTTCACCGAAA+AGG - chr7_4:57638494-57638513 Msa1165700:intron 45.0%
!! AATTCTAGCCCTGGCCTTTT+CGG + chr7_4:57638511-57638530 None:intergenic 45.0%
CTAGAATTGAGAAGGCTGGT+GGG - chr7_4:57638523-57638542 Msa1165700:intron 45.0%
TAGAATTGAGAAGGCTGGTG+GGG - chr7_4:57638524-57638543 Msa1165700:intron 45.0%
TCTAAGAGCCAGCTGATCAA+AGG + chr7_4:57638559-57638578 None:intergenic 45.0%
TGGCTCTTAGAGCTCCTTTA+GGG - chr7_4:57638568-57638587 Msa1165700:intron 45.0%
! TCTAATTTGCCGCAGCAGAT+AGG + chr7_4:57639056-57639075 None:intergenic 45.0%
TTGAAGCCGCTAGAGGAAAA+AGG - chr7_4:57639353-57639372 Msa1165700:CDS 45.0%
! GCTCTTCCTTTTTCCTCTAG+CGG + chr7_4:57639362-57639381 None:intergenic 45.0%
AGAGGAAAAAGGAAGAGCAG+AGG - chr7_4:57639364-57639383 Msa1165700:CDS 45.0%
GAACGAGAGAAATGGGGCTA+GGG + chr7_4:57637470-57637489 None:intergenic 50.0%
CTAGCCCCATTTCTCTCGTT+CGG - chr7_4:57637469-57637488 Msa1165700:three_prime_UTR 50.0%
TGTAGAGGAGGAACGTACCA+TGG + chr7_4:57637522-57637541 None:intergenic 50.0%
ATAAGAAATGGTCGCGCCGA+TGG + chr7_4:57637549-57637568 None:intergenic 50.0%
GGAGTGAGATGAGAGGTTGT+CGG + chr7_4:57637580-57637599 None:intergenic 50.0%
CCCTGCGAAAAGAGAGAAAG+AGG + chr7_4:57637601-57637620 None:intergenic 50.0%
!! CAGGGTATCGATTTGAAGGC+AGG - chr7_4:57637616-57637635 Msa1165700:three_prime_UTR 50.0%
!! GGTATCGATTTGAAGGCAGG+AGG - chr7_4:57637619-57637638 Msa1165700:three_prime_UTR 50.0%
TGTCACGGCACCAACAACTA+CGG + chr7_4:57638433-57638452 None:intergenic 50.0%
GTGCCGTGACAGATGACATT+AGG - chr7_4:57638442-57638461 Msa1165700:intron 50.0%
TAAGGTTCACCGAAAAGGCC+AGG - chr7_4:57638499-57638518 Msa1165700:intron 50.0%
AAGGTTCACCGAAAAGGCCA+GGG - chr7_4:57638500-57638519 Msa1165700:intron 50.0%
AGCCTTCTCAATTCTAGCCC+TGG + chr7_4:57638520-57638539 None:intergenic 50.0%
AGGGCTAGAATTGAGAAGGC+TGG - chr7_4:57638519-57638538 Msa1165700:intron 50.0%
GCTAGAATTGAGAAGGCTGG+TGG - chr7_4:57638522-57638541 Msa1165700:intron 50.0%
! CTGGCTCTTAGAGCTCCTTT+AGG - chr7_4:57638567-57638586 Msa1165700:intron 50.0%
!! AGCTCCTTTAGGGCAGAACA+CGG - chr7_4:57638578-57638597 Msa1165700:intron 50.0%
CATACCGTGTTCTGCCCTAA+AGG + chr7_4:57638585-57638604 None:intergenic 50.0%
! ACAGCCTCACGGGCATTTTT+GGG + chr7_4:57639256-57639275 None:intergenic 50.0%
! AAAGTGCTTGACAGCCTCAC+GGG + chr7_4:57639266-57639285 None:intergenic 50.0%
! CAAAGTGCTTGACAGCCTCA+CGG + chr7_4:57639267-57639286 None:intergenic 50.0%
! TAGGGCTTAGTGTTGCTGTG+TGG + chr7_4:57639307-57639326 None:intergenic 50.0%
AACACTAAGCCCTATGTCCG+TGG - chr7_4:57639313-57639332 Msa1165700:intron 50.0%
TCCTTCTCCCCAAGTGGAAA+AGG - chr7_4:57639516-57639535 Msa1165700:intron 50.0%
! TCCTTTTCCACTTGGGGAGA+AGG + chr7_4:57639520-57639539 None:intergenic 50.0%
TTCTTGTGCGCTCGTAGTGT+TGG - chr7_4:57639635-57639654 Msa1165700:CDS 50.0%
TCTTGTGCGCTCGTAGTGTT+GGG - chr7_4:57639636-57639655 Msa1165700:CDS 50.0%
GGGGAGTTGAACTTGAAGCA+GGG - chr7_4:57639662-57639681 Msa1165700:intron 50.0%
GAACGAGAGAAATGGGGCTA+GGG + chr7_4:57637470-57637489 None:intergenic 50.0%
CTAGCCCCATTTCTCTCGTT+CGG - chr7_4:57637469-57637488 Msa1165700:three_prime_UTR 50.0%
TGTAGAGGAGGAACGTACCA+TGG + chr7_4:57637522-57637541 None:intergenic 50.0%
ATAAGAAATGGTCGCGCCGA+TGG + chr7_4:57637549-57637568 None:intergenic 50.0%
GGAGTGAGATGAGAGGTTGT+CGG + chr7_4:57637580-57637599 None:intergenic 50.0%
CCCTGCGAAAAGAGAGAAAG+AGG + chr7_4:57637601-57637620 None:intergenic 50.0%
!! CAGGGTATCGATTTGAAGGC+AGG - chr7_4:57637616-57637635 Msa1165700:three_prime_UTR 50.0%
!! GGTATCGATTTGAAGGCAGG+AGG - chr7_4:57637619-57637638 Msa1165700:three_prime_UTR 50.0%
TGTCACGGCACCAACAACTA+CGG + chr7_4:57638433-57638452 None:intergenic 50.0%
GTGCCGTGACAGATGACATT+AGG - chr7_4:57638442-57638461 Msa1165700:intron 50.0%
TAAGGTTCACCGAAAAGGCC+AGG - chr7_4:57638499-57638518 Msa1165700:intron 50.0%
AAGGTTCACCGAAAAGGCCA+GGG - chr7_4:57638500-57638519 Msa1165700:intron 50.0%
AGCCTTCTCAATTCTAGCCC+TGG + chr7_4:57638520-57638539 None:intergenic 50.0%
AGGGCTAGAATTGAGAAGGC+TGG - chr7_4:57638519-57638538 Msa1165700:intron 50.0%
GCTAGAATTGAGAAGGCTGG+TGG - chr7_4:57638522-57638541 Msa1165700:intron 50.0%
! CTGGCTCTTAGAGCTCCTTT+AGG - chr7_4:57638567-57638586 Msa1165700:intron 50.0%
!! AGCTCCTTTAGGGCAGAACA+CGG - chr7_4:57638578-57638597 Msa1165700:intron 50.0%
CATACCGTGTTCTGCCCTAA+AGG + chr7_4:57638585-57638604 None:intergenic 50.0%
! ACAGCCTCACGGGCATTTTT+GGG + chr7_4:57639256-57639275 None:intergenic 50.0%
! AAAGTGCTTGACAGCCTCAC+GGG + chr7_4:57639266-57639285 None:intergenic 50.0%
! CAAAGTGCTTGACAGCCTCA+CGG + chr7_4:57639267-57639286 None:intergenic 50.0%
! TAGGGCTTAGTGTTGCTGTG+TGG + chr7_4:57639307-57639326 None:intergenic 50.0%
AACACTAAGCCCTATGTCCG+TGG - chr7_4:57639313-57639332 Msa1165700:intron 50.0%
TCCTTCTCCCCAAGTGGAAA+AGG - chr7_4:57639516-57639535 Msa1165700:intron 50.0%
! TCCTTTTCCACTTGGGGAGA+AGG + chr7_4:57639520-57639539 None:intergenic 50.0%
TTCTTGTGCGCTCGTAGTGT+TGG - chr7_4:57639635-57639654 Msa1165700:CDS 50.0%
TCTTGTGCGCTCGTAGTGTT+GGG - chr7_4:57639636-57639655 Msa1165700:CDS 50.0%
GGGGAGTTGAACTTGAAGCA+GGG - chr7_4:57639662-57639681 Msa1165700:intron 50.0%
CGAACGAGAGAAATGGGGCT+AGG + chr7_4:57637471-57637490 None:intergenic 55.0%
TGCGGCCGAACGAGAGAAAT+GGG + chr7_4:57637477-57637496 None:intergenic 55.0%
GCCGATGGAGATTGTAGAGG+AGG + chr7_4:57637534-57637553 None:intergenic 55.0%
GGCCAGGGCTAGAATTGAGA+AGG - chr7_4:57638515-57638534 Msa1165700:intron 55.0%
GTGCCTCACCTTTGATCAGC+TGG - chr7_4:57638548-57638567 Msa1165700:intron 55.0%
GAGCCAGCTGATCAAAGGTG+AGG + chr7_4:57638554-57638573 None:intergenic 55.0%
AGGTCCCAAAAATGCCCGTG+AGG - chr7_4:57639249-57639268 Msa1165700:intron 55.0%
! GACAGCCTCACGGGCATTTT+TGG + chr7_4:57639257-57639276 None:intergenic 55.0%
CGTGAGGCTGTCAAGCACTT+TGG - chr7_4:57639265-57639284 Msa1165700:intron 55.0%
AAGCACTTTGGACGAGCTCC+TGG - chr7_4:57639277-57639296 Msa1165700:intron 55.0%
! GTGTTGCTGTGTGGAACACC+AGG + chr7_4:57639298-57639317 None:intergenic 55.0%
CGAAAGGTTGAAGCCGCTAG+AGG - chr7_4:57639346-57639365 Msa1165700:CDS 55.0%
TTAGCGTCCTTCTCCCCAAG+TGG - chr7_4:57639510-57639529 Msa1165700:intron 55.0%
! TGCGCTCGTAGTGTTGGGAA+GGG - chr7_4:57639641-57639660 Msa1165700:intron 55.0%
GGGGGAGTTGAACTTGAAGC+AGG - chr7_4:57639661-57639680 Msa1165700:intron 55.0%
CGAACGAGAGAAATGGGGCT+AGG + chr7_4:57637471-57637490 None:intergenic 55.0%
TGCGGCCGAACGAGAGAAAT+GGG + chr7_4:57637477-57637496 None:intergenic 55.0%
GCCGATGGAGATTGTAGAGG+AGG + chr7_4:57637534-57637553 None:intergenic 55.0%
GGCCAGGGCTAGAATTGAGA+AGG - chr7_4:57638515-57638534 Msa1165700:intron 55.0%
GTGCCTCACCTTTGATCAGC+TGG - chr7_4:57638548-57638567 Msa1165700:intron 55.0%
GAGCCAGCTGATCAAAGGTG+AGG + chr7_4:57638554-57638573 None:intergenic 55.0%
AGGTCCCAAAAATGCCCGTG+AGG - chr7_4:57639249-57639268 Msa1165700:intron 55.0%
! GACAGCCTCACGGGCATTTT+TGG + chr7_4:57639257-57639276 None:intergenic 55.0%
CGTGAGGCTGTCAAGCACTT+TGG - chr7_4:57639265-57639284 Msa1165700:intron 55.0%
AAGCACTTTGGACGAGCTCC+TGG - chr7_4:57639277-57639296 Msa1165700:intron 55.0%
! GTGTTGCTGTGTGGAACACC+AGG + chr7_4:57639298-57639317 None:intergenic 55.0%
CGAAAGGTTGAAGCCGCTAG+AGG - chr7_4:57639346-57639365 Msa1165700:CDS 55.0%
TTAGCGTCCTTCTCCCCAAG+TGG - chr7_4:57639510-57639529 Msa1165700:intron 55.0%
! TGCGCTCGTAGTGTTGGGAA+GGG - chr7_4:57639641-57639660 Msa1165700:intron 55.0%
GGGGGAGTTGAACTTGAAGC+AGG - chr7_4:57639661-57639680 Msa1165700:intron 55.0%
GCGGCCGAACGAGAGAAATG+GGG + chr7_4:57637476-57637495 None:intergenic 60.0%
CTGCGGCCGAACGAGAGAAA+TGG + chr7_4:57637478-57637497 None:intergenic 60.0%
! CGCGCCGATGGAGATTGTAG+AGG + chr7_4:57637537-57637556 None:intergenic 60.0%
! GTGCGCTCGTAGTGTTGGGA+AGG - chr7_4:57639640-57639659 Msa1165700:intron 60.0%
! GCGCTCGTAGTGTTGGGAAG+GGG - chr7_4:57639642-57639661 Msa1165700:intron 60.0%
! CGCTCGTAGTGTTGGGAAGG+GGG - chr7_4:57639643-57639662 Msa1165700:intron 60.0%
GCGGCCGAACGAGAGAAATG+GGG + chr7_4:57637476-57637495 None:intergenic 60.0%
CTGCGGCCGAACGAGAGAAA+TGG + chr7_4:57637478-57637497 None:intergenic 60.0%
! CGCGCCGATGGAGATTGTAG+AGG + chr7_4:57637537-57637556 None:intergenic 60.0%
! GTGCGCTCGTAGTGTTGGGA+AGG - chr7_4:57639640-57639659 Msa1165700:intron 60.0%
! GCGCTCGTAGTGTTGGGAAG+GGG - chr7_4:57639642-57639661 Msa1165700:intron 60.0%
! CGCTCGTAGTGTTGGGAAGG+GGG - chr7_4:57639643-57639662 Msa1165700:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 57637444 57639831 57637444 ID=Msa1165700;Name=Msa1165700
chr7_4 mRNA 57637444 57639831 57637444 ID=Msa1165700-mRNA-1;Parent=Msa1165700;Name=Msa1165700-mRNA-1;_AED=0.03;_eAED=0.03;_QI=77|1|1|1|1|1|5|432|188
chr7_4 exon 57637444 57638037 57637444 ID=Msa1165700-mRNA-1:exon:17481;Parent=Msa1165700-mRNA-1
chr7_4 exon 57638676 57638858 57638676 ID=Msa1165700-mRNA-1:exon:17480;Parent=Msa1165700-mRNA-1
chr7_4 exon 57639338 57639466 57639338 ID=Msa1165700-mRNA-1:exon:17479;Parent=Msa1165700-mRNA-1
chr7_4 exon 57639567 57639656 57639567 ID=Msa1165700-mRNA-1:exon:17478;Parent=Msa1165700-mRNA-1
chr7_4 exon 57639752 57639831 57639752 ID=Msa1165700-mRNA-1:exon:17477;Parent=Msa1165700-mRNA-1
chr7_4 five_prime_UTR 57639755 57639831 57639755 ID=Msa1165700-mRNA-1:five_prime_utr;Parent=Msa1165700-mRNA-1
chr7_4 CDS 57639752 57639754 57639752 ID=Msa1165700-mRNA-1:cds;Parent=Msa1165700-mRNA-1
chr7_4 CDS 57639567 57639656 57639567 ID=Msa1165700-mRNA-1:cds;Parent=Msa1165700-mRNA-1
chr7_4 CDS 57639338 57639466 57639338 ID=Msa1165700-mRNA-1:cds;Parent=Msa1165700-mRNA-1
chr7_4 CDS 57638676 57638858 57638676 ID=Msa1165700-mRNA-1:cds;Parent=Msa1165700-mRNA-1
chr7_4 CDS 57637876 57638037 57637876 ID=Msa1165700-mRNA-1:cds;Parent=Msa1165700-mRNA-1
chr7_4 three_prime_UTR 57637444 57637875 57637444 ID=Msa1165700-mRNA-1:three_prime_utr;Parent=Msa1165700-mRNA-1
Gene Sequence

>Msa1165700

ATGGGTATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACTAAACGTACCGCACCAAAATCCAATGATATCTACCTCAAGCTTCTCGTTAAGCTATACCGTTTCCTTGTTCGAAGGACTGAAAGTAATTTCAATAAGGTTATCCTTAAGAGGCTTTTCATGAGCAAAGTCAACAAGCCACCACTATCACTTTCTAGGTTGATTCGTTACACCAAGGGAAAGGAGGGTAAGATTGCCGTAGTTGTTGGTGCCGTGACAGATGACATTAGGGTTTATGAAGTACCTGCAATTAAGGTAACTGCTCTAAGGTTCACCGAAAAGGCCAGGGCTAGAATTGAGAAGGCTGGTGGGGAGTGCCTCACCTTTGATCAGCTGGCTCTTAGAGCTCCTTTAGGGCAGAACACGGTTCTTCTTAGAGGTCCCAAAAATGCCCGTGAGGCTGTCAAGCACTTTGGACGAGCTCCTGGTGTTCCACACAGCAACACTAAGCCCTATGTCCGTGGAAAAAAATCACGAAAGGTTGAAGCCGCTAGAGGAAAAAGGAAGAGCAGAGGCTTTAAAGTTTGA

Protein sequence

>Msa1165700

MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKPPLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSNTKPYVRGKKSRKVEAARGKRKSRGFKV*