AlfalfaGEDB | Msa0146910

M. sativa cultivar zhongmu-4 / Msa0146910

KEGG: K02872
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0032991 GO:0034641 GO:0034645 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00572.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0146910	XP_003589380.1	100.000	206	0	0	1	206	1	206	1.22e-146	416

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0146910	sp\|Q9FKC0\|R13A4_ARATH	85.922	206	29	0	1	206	1	206	1.88e-130	368

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0146910	B7FMG6	100.000	206	0	0	1	206	1	206	5.82e-147	416

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003030	Msa0146910	0.999394	3.015722e-308	-8.615850e-47
Msa0004760	Msa0146910	0.805672	1.192151e-49	-8.615850e-47
Msa0042510	Msa0146910	0.847099	1.432245e-59	-8.615850e-47
Msa0079560	Msa0146910	0.851841	6.822461e-61	-8.615850e-47
Msa0093440	Msa0146910	-0.804507	2.090097e-49	-8.615850e-47
Msa0094940	Msa0146910	0.816109	6.550093e-52	-8.615850e-47
Msa0127230	Msa0146910	0.851712	7.425426e-61	-8.615850e-47
Msa0146910	Msa0172300	0.809430	1.899370e-50	-8.615850e-47
Msa0146910	Msa0226620	0.818238	2.175952e-52	-8.615850e-47
Msa0146910	Msa0260270	0.801594	8.363976e-49	-8.615850e-47
Msa0146910	Msa0304270	0.804066	2.581569e-49	-8.615850e-47
Msa0146910	Msa0304310	0.801537	8.591806e-49	-8.615850e-47
Msa0146910	Msa0334170	-0.805710	1.170423e-49	-8.615850e-47
Msa0146910	Msa0373350	0.873095	1.917769e-67	-8.615850e-47
Msa0146910	Msa0376850	0.853936	1.718652e-61	-8.615850e-47
Msa0146910	Msa0377610	0.855461	6.212329e-62	-8.615850e-47
Msa0146910	Msa0387290	0.833564	4.960487e-56	-8.615850e-47
Msa0146910	Msa0388520	0.829674	4.511592e-55	-8.615850e-47
Msa0146910	Msa0416470	0.816380	5.697787e-52	-8.615850e-47
Msa0146910	Msa0421920	0.872470	3.103217e-67	-8.615850e-47
Msa0146910	Msa0426820	0.830962	2.185286e-55	-8.615850e-47
Msa0146910	Msa0427380	0.812728	3.664314e-51	-8.615850e-47
Msa0146910	Msa0467740	0.889830	1.703750e-73	-8.615850e-47
Msa0146910	Msa0470230	0.827262	1.724315e-54	-8.615850e-47
Msa0146910	Msa0477670	0.819150	1.351119e-52	-8.615850e-47
Msa0146910	Msa0511760	0.813328	2.705614e-51	-8.615850e-47
Msa0146910	Msa0514130	0.892212	1.954723e-74	-8.615850e-47
Msa0146910	Msa0516830	0.854251	1.394337e-61	-8.615850e-47
Msa0146910	Msa0524340	0.802396	5.722331e-49	-8.615850e-47
Msa0146910	Msa0544930	-0.800016	1.756211e-48	-8.615850e-47
Msa0146910	Msa0578010	0.818932	1.514439e-52	-8.615850e-47
Msa0146910	Msa0610380	0.801415	9.101629e-49	-8.615850e-47
Msa0146910	Msa0619230	0.825213	5.300017e-54	-8.615850e-47
Msa0146910	Msa0621170	0.839987	1.140187e-57	-8.615850e-47
Msa0146910	Msa0621190	0.878612	2.438730e-69	-8.615850e-47
Msa0146910	Msa0641020	-0.817234	3.665107e-52	-8.615850e-47
Msa0146910	Msa0641030	-0.823127	1.637371e-53	-8.615850e-47
Msa0146910	Msa0650910	0.803787	2.951150e-49	-8.615850e-47
Msa0146910	Msa0656450	0.857615	1.447093e-62	-8.615850e-47
Msa0146910	Msa0660870	-0.826925	2.075317e-54	-8.615850e-47
Msa0146910	Msa0663330	-0.805843	1.097373e-49	-8.615850e-47
Msa0146910	Msa0664020	-0.808592	2.870740e-50	-8.615850e-47
Msa0146910	Msa0679560	-0.809618	1.730610e-50	-8.615850e-47
Msa0146910	Msa0691760	0.848256	6.883965e-60	-8.615850e-47
Msa0146910	Msa0692850	0.806991	6.286831e-50	-8.615850e-47
Msa0146910	Msa0700370	0.861286	1.141523e-63	-8.615850e-47
Msa0146910	Msa0716750	-0.834681	2.604396e-56	-8.615850e-47
Msa0146910	Msa0724530	0.802288	6.023916e-49	-8.615850e-47
Msa0146910	Msa0757980	-0.819272	1.267294e-52	-8.615850e-47
Msa0146910	Msa0799280	-0.830206	3.345612e-55	-8.615850e-47
Msa0146910	Msa0837500	-0.814503	1.490148e-51	-8.615850e-47
Msa0146910	Msa0839230	-0.807491	4.925349e-50	-8.615850e-47
Msa0146910	Msa0883430	-0.801846	7.427585e-49	-8.615850e-47
Msa0146910	Msa0930360	0.834541	2.823301e-56	-8.615850e-47
Msa0146910	Msa0998890	0.863367	2.619568e-64	-8.615850e-47
Msa0146910	Msa1027870	0.807107	5.941694e-50	-8.615850e-47
Msa0146910	Msa1035900	0.805483	1.306082e-49	-8.615850e-47
Msa0146910	Msa1082050	0.811151	8.081534e-51	-8.615850e-47
Msa0146910	Msa1084850	0.801584	8.404862e-49	-8.615850e-47
Msa0146910	Msa1119260	0.802362	5.815372e-49	-8.615850e-47
Msa0146910	Msa1144630	0.817152	3.824216e-52	-8.615850e-47
Msa0146910	Msa1165700	0.861540	9.547261e-64	-8.615850e-47
Msa0146910	Msa1169470	0.808107	3.644063e-50	-8.615850e-47
Msa0146910	Msa1189540	0.836578	8.620779e-57	-8.615850e-47
Msa0146910	Msa1209560	-0.829998	3.761031e-55	-8.615850e-47
Msa0146910	Msa1225730	0.814535	1.466436e-51	-8.615850e-47
Msa0146910	Msa1227350	0.950032	3.794215e-108	-8.615850e-47
Msa0146910	Msa1246040	-0.808678	2.752769e-50	-8.615850e-47
Msa0146910	Msa1284800	0.827472	1.535317e-54	-8.615850e-47
Msa0146910	Msa1330530	-0.805448	1.328328e-49	-8.615850e-47
Msa0146910	Msa1363930	0.817476	3.233700e-52	-8.615850e-47
Msa0146910	Msa1366540	0.813240	2.828959e-51	-8.615850e-47
Msa0146910	Msa1387750	0.885961	5.173699e-72	-8.615850e-47
Msa0146910	Msa1390760	0.828789	7.393347e-55	-8.615850e-47
Msa0146910	Msa1407550	0.810943	8.964433e-51	-8.615850e-47
Msa0146910	Msa1413570	0.852999	3.193087e-61	-8.615850e-47
Msa0146910	Msa1445250	-0.818512	1.885941e-52	-8.615850e-47
Msa0146910	Msa1446510	0.929809	4.074041e-93	-8.615850e-47
Msa0146910	Msa1463510	0.824354	8.448975e-54	-8.615850e-47
Msa0146910	Msa1465890	0.845909	3.025611e-59	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0146910	MtrunA17_Chr1g0155981	100.000	206	0	1	206	1	206	1.12e-150	416
Msa0146910	MtrunA17_Chr7g0237121	94.660	206	11	1	206	1	206	1.49e-143	398
Msa0146910	MtrunA17_Chr5g0437981	91.262	206	18	1	206	1	206	3.20e-138	384

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0146910	AT5G48760.1	85.922	206	29	0	1	206	1	206	1.91e-131	368
Msa0146910	AT5G48760.2	85.922	206	29	0	1	206	1	206	1.91e-131	368
Msa0146910	AT3G07110.1	84.951	206	31	0	1	206	1	206	6.59e-130	364
Msa0146910	AT4G13170.1	84.951	206	31	0	1	206	1	206	9.06e-130	363
Msa0146910	AT3G07110.2	84.541	207	31	1	1	206	1	207	2.75e-128	360
Msa0146910	AT3G24830.1	83.495	206	34	0	1	206	1	206	5.30e-128	359

Find 94 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATGGTCCTATTCACTTTA+GGG	0.192347	1_4:-6663993	Msa0146910:CDS
CTCATGGTCCTATTCACTTT+AGG	0.198145	1_4:-6663994	Msa0146910:CDS
ATCTCAAATGCAGGATATTT+AGG	0.278445	1_4:+6660478	None:intergenic
GGGCTCCCTCTAAGATCTTT+TGG	0.279612	1_4:-6663973	Msa0146910:CDS
TGAGATGAATATAGACTAAC+TGG	0.300848	1_4:-6660461	Msa0146910:three_prime_UTR
CATTATTATAAGGTTTAGTT+TGG	0.304616	1_4:-6660746	Msa0146910:three_prime_UTR
GCTTGTTATTCTATGTTTGT+TGG	0.318515	1_4:-6660682	Msa0146910:three_prime_UTR
TATTTGTTAACATTATTATA+AGG	0.320139	1_4:-6660756	Msa0146910:three_prime_UTR
TTCCAATAGTGTTGCCCCTT+TGG	0.322660	1_4:-6660587	Msa0146910:three_prime_UTR
ACTATGAAGCTTATAGTTGT+TGG	0.329462	1_4:-6660524	Msa0146910:three_prime_UTR
CACCAAAGGGGCAACACTAT+TGG	0.342959	1_4:+6660585	None:intergenic
GACGGCCGAGCATGTGGTGG+CGG	0.371739	1_4:+6664161	None:intergenic
GGGAGCAAGGACTTCAAGTT+GGG	0.380650	1_4:+6660795	None:intergenic
TATAGGAGCTGGAGGATAAG+AGG	0.397991	1_4:-6660909	Msa0146910:intron
TGTGAAGAAATTTGTGCTTC+AGG	0.399041	1_4:-6664082	Msa0146910:CDS
AATAACAAGCAAAACTGAAA+TGG	0.403835	1_4:+6660695	None:intergenic
TGAAGTATATGAGATTTCTA+AGG	0.407625	1_4:-6664039	Msa0146910:CDS
CGGCGAGGTTGTTCTTCTCC+GGG	0.411234	1_4:+6664251	None:intergenic
CAGGATATTTAGGCACCTAT+TGG	0.413197	1_4:+6660488	None:intergenic
GGCTGCACTCGCGCGATTGA+AGG	0.416813	1_4:-6661272	Msa0146910:CDS
GAGGAAGGAACGCGCAGGTT+TGG	0.417217	1_4:-6660890	Msa0146910:CDS
ATATATGATGTTACACCAAA+GGG	0.421265	1_4:+6660572	None:intergenic
GTTCTTCTCCGGGGACAGCT+AGG	0.425336	1_4:+6664261	None:intergenic
GCGGCGAGGTTGTTCTTCTC+CGG	0.430830	1_4:+6664250	None:intergenic
TAGGGTGTTGAGACTTCAAA+AGG	0.434162	1_4:-6661089	Msa0146910:CDS
ATCCTCTTGATCTTGTCATA+TGG	0.437541	1_4:+6661229	None:intergenic
CGGGAGCAAGGACTTCAAGT+TGG	0.439216	1_4:+6660794	None:intergenic
AATAGTACTCAGTACTTAAC+GGG	0.449959	1_4:+6660775	None:intergenic
AAATAGTACTCAGTACTTAA+CGG	0.452401	1_4:+6660774	None:intergenic
GGATTATTGATGCTGCCAAT+AGG	0.469766	1_4:-6660503	Msa0146910:three_prime_UTR
GAGGGAGCCCTAAAGTGAAT+AGG	0.470476	1_4:+6663986	None:intergenic
GGTTCTTACTTGAGAGCATC+GGG	0.471713	1_4:+6661199	None:intergenic
AGAAGCTGCTCAATAAATTG+AGG	0.480348	1_4:-6660855	Msa0146910:CDS
AACACTATTGGAAAGTAAGT+TGG	0.484076	1_4:+6660597	None:intergenic
AACCTAAAACAGTTCATGTT+GGG	0.486376	1_4:-6664379	Msa0146910:five_prime_UTR
ATATGAGATTTCTAAGGAAG+AGG	0.501956	1_4:-6664033	Msa0146910:CDS
TTCTTCTCCGGGGACAGCTA+GGG	0.509116	1_4:+6664262	None:intergenic
CGCGCGATTGAAGGTCTATG+AGG	0.509761	1_4:-6661263	Msa0146910:CDS
CTTAGCGCATATGCCTGATC+CGG	0.515048	1_4:+6664201	None:intergenic
GAGAAGAACAACCTCGCCGC+CGG	0.515259	1_4:-6664247	Msa0146910:five_prime_UTR
GAAGCTGCTCAATAAATTGA+GGG	0.519049	1_4:-6660854	Msa0146910:CDS
GACGCCCGCCACCACATGCT+CGG	0.519214	1_4:-6664166	Msa0146910:CDS
ACGGCCGAGCATGTGGTGGC+GGG	0.522437	1_4:+6664162	None:intergenic
TCTATATTCATCTCAAATGC+AGG	0.528432	1_4:+6660469	None:intergenic
AGTGCGCCAAAAGATCTTAG+AGG	0.534021	1_4:+6663967	None:intergenic
TGGTTCTTACTTGAGAGCAT+CGG	0.539745	1_4:+6661198	None:intergenic
GAGAAGCTCCTTTGCGACAA+TGG	0.544115	1_4:+6664132	None:intergenic
TTCTTGTTTATAGGAGCTGG+AGG	0.546787	1_4:-6660917	Msa0146910:intron
GAACCTAAAACAGTTCATGT+TGG	0.549953	1_4:-6664380	Msa0146910:five_prime_UTR
GGACACAAATACTGCTTGCT+CGG	0.550212	1_4:-6661067	Msa0146910:CDS
ATGAATACTAAACCTTCTCA+TGG	0.560213	1_4:-6664010	Msa0146910:CDS
GTACTTTCACCTTGTGCTCG+CGG	0.560931	1_4:-6660437	Msa0146910:three_prime_UTR
CTCAGTACTTAACGGGAGCA+AGG	0.561409	1_4:+6660782	None:intergenic
GTCGCAAAGGAGCTTCTCAA+TGG	0.561981	1_4:-6664127	Msa0146910:CDS
ATGAAGTTTCCGCGAGCACA+AGG	0.563199	1_4:+6660428	None:intergenic
AGTTGTCATCAGAGGTTGGA+TGG	0.565112	1_4:-6661042	Msa0146910:CDS
CATCAAACCCTAGCTGTCCC+CGG	0.571320	1_4:-6664269	Msa0146910:five_prime_UTR
AGGCAAGACGGCCGAGCATG+TGG	0.572354	1_4:+6664155	None:intergenic
TTGATCTTGTCATATGGAGG+AGG	0.574582	1_4:+6661235	None:intergenic
CTCCATATGACAAGATCAAG+AGG	0.577162	1_4:-6661231	Msa0146910:CDS
TCTTGCCTCCATTGTCGCAA+AGG	0.579194	1_4:-6664140	Msa0146910:CDS
CATATATGATGTTACACCAA+AGG	0.581184	1_4:+6660571	None:intergenic
ACAGCTAGGGTTTGATGATG+AGG	0.581750	1_4:+6664275	None:intergenic
TCAGAGGTTGGATGGAACTA+CGG	0.586349	1_4:-6661034	Msa0146910:CDS
GGAGCTGGAGGATAAGAGGA+AGG	0.587458	1_4:-6660905	Msa0146910:CDS
GAACTACGGTGGCATCATCA+AGG	0.590785	1_4:-6661020	Msa0146910:intron
GGACAGTTGTCATCAGAGGT+TGG	0.592395	1_4:-6661046	Msa0146910:CDS
CTCTTGATCTTGTCATATGG+AGG	0.593959	1_4:+6661232	None:intergenic
GCTCGGACAGTTGTCATCAG+AGG	0.597789	1_4:-6661050	Msa0146910:CDS
GGAGCTTCTCAATGGTCAGA+AGG	0.600116	1_4:-6664119	Msa0146910:CDS
GTGCGCCAAAAGATCTTAGA+GGG	0.602717	1_4:+6663968	None:intergenic
CAAGACGGCCGAGCATGTGG+TGG	0.603581	1_4:+6664158	None:intergenic
TTGCGACAATGGAGGCAAGA+CGG	0.613146	1_4:+6664143	None:intergenic
AGAATCTGTTTCCGGCGGCG+AGG	0.617786	1_4:+6664236	None:intergenic
AGGGTGTTGAGACTTCAAAA+GGG	0.620018	1_4:-6661088	Msa0146910:CDS
GCGCGATTGAAGGTCTATGA+GGG	0.624683	1_4:-6661262	Msa0146910:CDS
ATATGACAAGATCAAGAGGA+TGG	0.634497	1_4:-6661227	Msa0146910:CDS
GGAGCAAGGACTTCAAGTTG+GGG	0.640419	1_4:+6660796	None:intergenic
TCTCCACGCTTAGTCTTGTG+TGG	0.642845	1_4:+6661295	None:intergenic
ATACCACACAAGACTAAGCG+TGG	0.643021	1_4:-6661298	Msa0146910:CDS
TAAGCTTTAGGGGTTTGTCG+TGG	0.645586	1_4:-6660401	None:intergenic
AAGCTCCTTTGCGACAATGG+AGG	0.645821	1_4:+6664135	None:intergenic
AGCAAGGACTTCAAGTTGGG+GGG	0.650449	1_4:+6660798	None:intergenic
GGCGAGGTTGTTCTTCTCCG+GGG	0.652369	1_4:+6664252	None:intergenic
GATAAGAGGAAGGAACGCGC+AGG	0.659068	1_4:-6660895	Msa0146910:CDS
GCTTCTCAATGGTCAGAAGG+TGG	0.662927	1_4:-6664116	Msa0146910:CDS
ACACAAGACTAAGCGTGGAG+AGG	0.667676	1_4:-6661293	Msa0146910:CDS
AAGTGAATAGGACCATGAGA+AGG	0.669515	1_4:+6663998	None:intergenic
GAGATGAATATAGACTAACT+GGG	0.687169	1_4:-6660460	Msa0146910:three_prime_UTR
GAGCAAGGACTTCAAGTTGG+GGG	0.688692	1_4:+6660797	None:intergenic
GAAGAAATTTGTGCTTCAGG+TGG	0.691821	1_4:-6664079	Msa0146910:CDS
GAGGTTGGATGGAACTACGG+TGG	0.706495	1_4:-6661031	Msa0146910:CDS
TATATGATGTTACACCAAAG+GGG	0.708571	1_4:+6660573	None:intergenic
AGATGAATATAGACTAACTG+GGG	0.722189	1_4:-6660459	Msa0146910:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTATTTTTATAAATTTATT+AGG	-	chr1_4:6662397-6662416	Msa0146910:intron	0.0%
!!!	ATTTTTGTTTAATTTGATAT+TGG	-	chr1_4:6660925-6660944	Msa0146910:intron	10.0%
!!!	TTTTTGTTTAATTTGATATT+GGG	-	chr1_4:6660926-6660945	Msa0146910:intron	10.0%
!!!	TTTTCTTAATTAAATTTTGT+TGG	-	chr1_4:6662304-6662323	Msa0146910:intron	10.0%
!!!	TTTCTTAATTAAATTTTGTT+GGG	-	chr1_4:6662305-6662324	Msa0146910:intron	10.0%
!!!	GTTTTTTTATATGAATTATA+AGG	-	chr1_4:6662464-6662483	Msa0146910:intron	10.0%
!!!	TATTTGTTAACATTATTATA+AGG	-	chr1_4:6664041-6664060	Msa0146910:CDS	10.0%
!!!	TGTATTTGTATTTGTTTTTT+AGG	-	chr1_4:6661084-6661103	Msa0146910:CDS	15.0%
!!	TTTGATTATTAGATTGAATT+GGG	-	chr1_4:6661249-6661268	Msa0146910:CDS	15.0%
!!!	ATGATTTGTGATTATAAATA+TGG	-	chr1_4:6661374-6661393	Msa0146910:intron	15.0%
!!!	TATGTTATTTCTATAACAAA+AGG	+	chr1_4:6661650-6661669	None:intergenic	15.0%
!!	ATATGAATTATAAGGTTATT+TGG	-	chr1_4:6662472-6662491	Msa0146910:intron	15.0%
!!	CTGTAAATTATACAATAAAA+TGG	+	chr1_4:6663622-6663641	None:intergenic	15.0%
!!!	TTTTATTGTGTTTTGTTGAT+TGG	-	chr1_4:6660884-6660903	Msa0146910:CDS	20.0%
!!!	TTTTGTTGATTGGATTATAA+TGG	-	chr1_4:6660894-6660913	Msa0146910:CDS	20.0%
!!!	TTTGTTGATTGGATTATAAT+GGG	-	chr1_4:6660895-6660914	Msa0146910:CDS	20.0%
!!!	TATTATTAGCATTTTGTCTA+TGG	-	chr1_4:6661024-6661043	Msa0146910:CDS	20.0%
!!!	ATTATTAGCATTTTGTCTAT+GGG	-	chr1_4:6661025-6661044	Msa0146910:CDS	20.0%
!!!	TTTGTATTTGTTTAGTTTGA+CGG	-	chr1_4:6661061-6661080	Msa0146910:CDS	20.0%
!!!	GTATTTGTTTTTTAGGAATT+TGG	-	chr1_4:6661091-6661110	Msa0146910:intron	20.0%
!!!	GATGTTTAATGTGTTTTATA+AGG	-	chr1_4:6661161-6661180	Msa0146910:intron	20.0%
!!!	ATGTGTTTTATAAGGTTATT+TGG	-	chr1_4:6661169-6661188	Msa0146910:intron	20.0%
!!	GTTTGATTATTAGATTGAAT+TGG	-	chr1_4:6661248-6661267	Msa0146910:CDS	20.0%
!!	AGTTAATAAGTCAATTGAAA+TGG	+	chr1_4:6661402-6661421	None:intergenic	20.0%
!!	TTTACAAGAACTTATGAAAA+TGG	-	chr1_4:6661458-6661477	Msa0146910:intron	20.0%
!!!	GTTTTGAAGTGATTAATTAA+GGG	-	chr1_4:6661764-6661783	Msa0146910:intron	20.0%
!!	ATTTGATAGAATTATGAAGT+TGG	-	chr1_4:6661818-6661837	Msa0146910:intron	20.0%
!!	TTTGATTAGGTAGAATATAT+TGG	-	chr1_4:6662085-6662104	Msa0146910:intron	20.0%
!!	TTGATTAGGTAGAATATATT+GGG	-	chr1_4:6662086-6662105	Msa0146910:intron	20.0%
!!	CAATTCTATCAAATAAACAA+AGG	+	chr1_4:6662160-6662179	None:intergenic	20.0%
!!!	AAAGTGTTGTTATTTTTTAG+AGG	-	chr1_4:6662195-6662214	Msa0146910:intron	20.0%
!!!	AAGTGTTGTTATTTTTTAGA+GGG	-	chr1_4:6662196-6662215	Msa0146910:intron	20.0%
!!	TTTGCTTATATGATTGAATT+GGG	-	chr1_4:6662565-6662584	Msa0146910:intron	20.0%
!!	TTTGAAAGAACTTATGAAAA+CGG	-	chr1_4:6662749-6662768	Msa0146910:intron	20.0%
!!	ATCTGATAGAATTATAAAGT+TGG	-	chr1_4:6663037-6663056	Msa0146910:intron	20.0%
!!!	TTCAAGTGGTTATTTAATTT+TGG	-	chr1_4:6663345-6663364	Msa0146910:intron	20.0%
!!!	CTTTTTGTTGTTGAATTAAA+AGG	-	chr1_4:6663648-6663667	Msa0146910:intron	20.0%
!!!	AGGTGATTTTTTTTTTGTTT+TGG	-	chr1_4:6663797-6663816	Msa0146910:intron	20.0%
!!!	GATTTTTTTTTTGTTTTGGT+TGG	-	chr1_4:6663801-6663820	Msa0146910:intron	20.0%
!!!	GTGGTTTTGAATTTTTTAAT+TGG	-	chr1_4:6663856-6663875	Msa0146910:intron	20.0%
!!!	TTAATTGGTTTCTTGTTTAT+AGG	-	chr1_4:6663871-6663890	Msa0146910:intron	20.0%
!!	CATTATTATAAGGTTTAGTT+TGG	-	chr1_4:6664051-6664070	Msa0146910:CDS	20.0%
!!!	TTCCAAAATTGTCATTTTTA+AGG	+	chr1_4:6664142-6664161	None:intergenic	20.0%
!!	TGAATGAGTGTGTAATTTTT+GGG	+	chr1_4:6660491-6660510	None:intergenic	25.0%
!!	ATGAATGAGTGTGTAATTTT+TGG	+	chr1_4:6660492-6660511	None:intergenic	25.0%
!	TGAAGTATATGAGATTTCTA+AGG	-	chr1_4:6660758-6660777	Msa0146910:three_prime_UTR	25.0%
!	GTATAAAAAAACAGAGTAAG+TGG	+	chr1_4:6661000-6661019	None:intergenic	25.0%
!!!	TTGTTTTTTAGGAATTTGGT+AGG	-	chr1_4:6661095-6661114	Msa0146910:intron	25.0%
!	AGATCTATTTATTCAGCATA+TGG	+	chr1_4:6661138-6661157	None:intergenic	25.0%
!!!	TTGGCTTTGTGATATAATTT+AGG	-	chr1_4:6661201-6661220	Msa0146910:intron	25.0%
!!	ACATAGAATGTCTTTTTCTA+TGG	-	chr1_4:6661339-6661358	Msa0146910:intron	25.0%
!!!	TACGTTATTTCTACAACAAA+AGG	+	chr1_4:6661590-6661609	None:intergenic	25.0%
!	CAAAAAAGAACATTATACGT+GGG	+	chr1_4:6661740-6661759	None:intergenic	25.0%
!!!	GTATAATGTTCTTTTTTGGA+GGG	-	chr1_4:6661742-6661761	Msa0146910:intron	25.0%
!!!	GGTTTTGAAGTGATTAATTA+AGG	-	chr1_4:6661763-6661782	Msa0146910:intron	25.0%
!!!	AGAAGTGTTCTTTGTTTATT+TGG	-	chr1_4:6661895-6661914	Msa0146910:intron	25.0%
!	TTAGCTTATTGATGTTTGAA+TGG	-	chr1_4:6661960-6661979	Msa0146910:intron	25.0%
!!!	GAAAAGTGTTATTAGAAATG+TGG	-	chr1_4:6662043-6662062	Msa0146910:intron	25.0%
!!	TTATGTAGAATGCTTTCTTT+TGG	-	chr1_4:6662240-6662259	Msa0146910:intron	25.0%
!!	TATGTAGAATGCTTTCTTTT+GGG	-	chr1_4:6662241-6662260	Msa0146910:intron	25.0%
!!	GTTTGGACTAGATATAATTT+AGG	-	chr1_4:6662517-6662536	Msa0146910:intron	25.0%
!	GTTTGCTTATATGATTGAAT+TGG	-	chr1_4:6662564-6662583	Msa0146910:intron	25.0%
!!!	CTTATTTTCATAAACTCTCT+AGG	-	chr1_4:6662800-6662819	Msa0146910:intron	25.0%
!!	ATTTAGAATGATTAGACTCA+TGG	-	chr1_4:6663134-6663153	Msa0146910:intron	25.0%
!!	ATAGAAAAAGTGTAGATCTT+AGG	-	chr1_4:6663194-6663213	Msa0146910:intron	25.0%
!!	TTCGTAAAAGTGTAGATAAT+AGG	-	chr1_4:6663229-6663248	Msa0146910:intron	25.0%
!!	TAAAAGTGTAGATAATAGGA+GGG	-	chr1_4:6663233-6663252	Msa0146910:intron	25.0%
!	TGAATGAGTGAATGAAATTA+GGG	-	chr1_4:6663690-6663709	Msa0146910:intron	25.0%
!!	GAATTTGATCAACAATTTTG+TGG	-	chr1_4:6663837-6663856	Msa0146910:intron	25.0%
!	AAATAGTACTCAGTACTTAA+CGG	+	chr1_4:6664026-6664045	None:intergenic	25.0%
!	AATAACAAGCAAAACTGAAA+TGG	+	chr1_4:6664105-6664124	None:intergenic	25.0%
!!	GACCTTAAAAATGACAATTT+TGG	-	chr1_4:6664137-6664156	Msa0146910:CDS	25.0%
!	ATATATGATGTTACACCAAA+GGG	+	chr1_4:6664228-6664247	None:intergenic	25.0%
!!	AACTTCATTTTCTAAGCTTT+AGG	-	chr1_4:6664384-6664403	Msa0146910:five_prime_UTR	25.0%
!!	ACTTCATTTTCTAAGCTTTA+GGG	-	chr1_4:6664385-6664404	Msa0146910:five_prime_UTR	25.0%
	AACCTAAAACAGTTCATGTT+GGG	-	chr1_4:6660418-6660437	Msa0146910:three_prime_UTR	30.0%
!!!	TTAAGCCCATGAACTTTTTT+GGG	+	chr1_4:6660449-6660468	None:intergenic	30.0%
!!!	TTTAAGCCCATGAACTTTTT+TGG	+	chr1_4:6660450-6660469	None:intergenic	30.0%
!!	CATTTTTGAGAATCTGTTTC+CGG	+	chr1_4:6660572-6660591	None:intergenic	30.0%
	AGATTCTCAAAAATGGTTTC+CGG	-	chr1_4:6660577-6660596	Msa0146910:three_prime_UTR	30.0%
!	ATATGAGATTTCTAAGGAAG+AGG	-	chr1_4:6660764-6660783	Msa0146910:exon	30.0%
	ATGAATACTAAACCTTCTCA+TGG	-	chr1_4:6660787-6660806	Msa0146910:CDS	30.0%
!	TTTTGTCTATGGGATTTCAT+TGG	-	chr1_4:6661035-6661054	Msa0146910:CDS	30.0%
	TTTGTCTATGGGATTTCATT+GGG	-	chr1_4:6661036-6661055	Msa0146910:CDS	30.0%
!!	GGTTATTTGGTGTTTGTAAT+TGG	-	chr1_4:6661182-6661201	Msa0146910:intron	30.0%
!	TAGAATGTCTTTTTCTATGG+AGG	-	chr1_4:6661342-6661361	Msa0146910:intron	30.0%
!	AGAATGTCTTTTTCTATGGA+GGG	-	chr1_4:6661343-6661362	Msa0146910:intron	30.0%
	TTATGAAAATGGCTTATGAC+AGG	-	chr1_4:6661469-6661488	Msa0146910:intron	30.0%
	CCAAAAAAGAACATTATACG+TGG	+	chr1_4:6661741-6661760	None:intergenic	30.0%
!!!	CCACGTATAATGTTCTTTTT+TGG	-	chr1_4:6661738-6661757	Msa0146910:intron	30.0%
!!!	CGTATAATGTTCTTTTTTGG+AGG	-	chr1_4:6661741-6661760	Msa0146910:intron	30.0%
	AAACACCAAATTACCTTATG+GGG	+	chr1_4:6661936-6661955	None:intergenic	30.0%
	CAAACACCAAATTACCTTAT+GGG	+	chr1_4:6661937-6661956	None:intergenic	30.0%
	ACAAACACCAAATTACCTTA+TGG	+	chr1_4:6661938-6661957	None:intergenic	30.0%
	ATTAGGTAGAATATATTGGG+AGG	-	chr1_4:6662089-6662108	Msa0146910:intron	30.0%
	TTAGGTAGAATATATTGGGA+GGG	-	chr1_4:6662090-6662109	Msa0146910:intron	30.0%
!	ACAAAACCACAAAACACTTT+TGG	+	chr1_4:6662275-6662294	None:intergenic	30.0%
!!	ATTAGGAAGTGTTGATATTG+TGG	-	chr1_4:6662414-6662433	Msa0146910:intron	30.0%
!!	GGTTATTTGGTGTTTGTAAT+TGG	-	chr1_4:6661182-6661201	Msa0146910:intron	30.0%
	TAGTTTATCTAAACATGCCT+AGG	-	chr1_4:6662933-6662952	Msa0146910:intron	30.0%
	TTGAAGTGATTAATGAATCC+AGG	-	chr1_4:6662982-6663001	Msa0146910:intron	30.0%
!!	AACTTTAAAACAATGCATCC+TGG	+	chr1_4:6663003-6663022	None:intergenic	30.0%
	TTGAATGTTGTGTTGTGTTA+TGG	-	chr1_4:6663084-6663103	Msa0146910:intron	30.0%
!!!	GGTTTTTGAGAAGTGTTATT+TGG	-	chr1_4:6663109-6663128	Msa0146910:intron	30.0%
	TAGATCTTAGGATCATAACA+AGG	-	chr1_4:6663206-6663225	Msa0146910:intron	30.0%
!	GTAAAAGTGTAGATAATAGG+AGG	-	chr1_4:6663232-6663251	Msa0146910:intron	30.0%
!	ATATGTAGAATGCTGTCTTT+TGG	-	chr1_4:6663273-6663292	Msa0146910:intron	30.0%
!!!	TTTTTTTAGCGCTATTCAAG+TGG	-	chr1_4:6663331-6663350	Msa0146910:intron	30.0%
	GTTGAACGTCTTTGTATATT+TGG	-	chr1_4:6663383-6663402	Msa0146910:intron	30.0%
!!!	GTTTTTTGAGAACTGTTTTG+TGG	-	chr1_4:6663464-6663483	Msa0146910:intron	30.0%
	CTGAATGAGTGAATGAAATT+AGG	-	chr1_4:6663689-6663708	Msa0146910:intron	30.0%
	AATAGTACTCAGTACTTAAC+GGG	+	chr1_4:6664025-6664044	None:intergenic	30.0%
!!	GCTTGTTATTCTATGTTTGT+TGG	-	chr1_4:6664115-6664134	Msa0146910:CDS	30.0%
	AACACTATTGGAAAGTAAGT+TGG	+	chr1_4:6664203-6664222	None:intergenic	30.0%
	TATATGATGTTACACCAAAG+GGG	+	chr1_4:6664227-6664246	None:intergenic	30.0%
	CATATATGATGTTACACCAA+AGG	+	chr1_4:6664229-6664248	None:intergenic	30.0%
	ACTATGAAGCTTATAGTTGT+TGG	-	chr1_4:6664273-6664292	Msa0146910:five_prime_UTR	30.0%
	ATCTCAAATGCAGGATATTT+AGG	+	chr1_4:6664322-6664341	None:intergenic	30.0%
	TCTATATTCATCTCAAATGC+AGG	+	chr1_4:6664331-6664350	None:intergenic	30.0%
	TGAGATGAATATAGACTAAC+TGG	-	chr1_4:6664336-6664355	Msa0146910:five_prime_UTR	30.0%
	GAGATGAATATAGACTAACT+GGG	-	chr1_4:6664337-6664356	Msa0146910:five_prime_UTR	30.0%
	AGATGAATATAGACTAACTG+GGG	-	chr1_4:6664338-6664357	Msa0146910:five_prime_UTR	30.0%
!!	CTTCATTTTCTAAGCTTTAG+GGG	-	chr1_4:6664386-6664405	Msa0146910:five_prime_UTR	30.0%
	GAACCTAAAACAGTTCATGT+TGG	-	chr1_4:6660417-6660436	Msa0146910:three_prime_UTR	35.0%
!	TTGGGCTTTTCTACTTTGTT+TGG	+	chr1_4:6660473-6660492	None:intergenic	35.0%
	CGGAAACAGATTCTCAAAAA+TGG	-	chr1_4:6660570-6660589	Msa0146910:three_prime_UTR	35.0%
	TGTGAAGAAATTTGTGCTTC+AGG	-	chr1_4:6660715-6660734	Msa0146910:three_prime_UTR	35.0%
	TCATGGTCCTATTCACTTTA+GGG	-	chr1_4:6660804-6660823	Msa0146910:CDS	35.0%
!	ATGTAGCTGTTGAGTGTTTT+TGG	-	chr1_4:6661287-6661306	Msa0146910:CDS	35.0%
!	CTGTTTTCATTAGCTACTCT+TGG	+	chr1_4:6661530-6661549	None:intergenic	35.0%
!	AGTGATTAATTAAGGGTGCA+TGG	-	chr1_4:6661771-6661790	Msa0146910:intron	35.0%
	TTGAATGTTGTGTTGTGTTC+CGG	-	chr1_4:6661862-6661881	Msa0146910:intron	35.0%
	AACACCAAATTACCTTATGG+GGG	+	chr1_4:6661935-6661954	None:intergenic	35.0%
!!	TTGACGAGTGTTGTTTGATT+AGG	-	chr1_4:6662072-6662091	Msa0146910:intron	35.0%
!!	TAGAATGCTTTCTTTTGGGA+GGG	-	chr1_4:6662245-6662264	Msa0146910:intron	35.0%
!!	TTTGGTGTTTGTAATTGGCT+TGG	-	chr1_4:6661187-6661206	Msa0146910:intron	35.0%
!!	TTGCTGTTGAGTGTTTTTCA+AGG	-	chr1_4:6662607-6662626	Msa0146910:intron	35.0%
	GCTTGATTATGCATGTTGTT+TGG	-	chr1_4:6662693-6662712	Msa0146910:intron	35.0%
	TTATGAAAACGGCTTATGAC+AGG	-	chr1_4:6662760-6662779	Msa0146910:intron	35.0%
	AAAAAGAGGACATTCTACCT+AGG	+	chr1_4:6662953-6662972	None:intergenic	35.0%
!	TAGGTAGAATGTCCTCTTTT+TGG	-	chr1_4:6662952-6662971	Msa0146910:intron	35.0%
!	TAGAATGTCCTCTTTTTGGA+GGG	-	chr1_4:6662956-6662975	Msa0146910:intron	35.0%
	TTCAAAAACCCTCCAAAAAG+AGG	+	chr1_4:6662967-6662986	None:intergenic	35.0%
	AATGTTGTGTTGTGTTATGG+AGG	-	chr1_4:6663087-6663106	Msa0146910:intron	35.0%
	ATGTTGTGTTGTGTTATGGA+GGG	-	chr1_4:6663088-6663107	Msa0146910:intron	35.0%
	AGACTCATGGTTGTCAAAAT+CGG	-	chr1_4:6663147-6663166	Msa0146910:intron	35.0%
	ATACCCAAACGATCTTTAGT+GGG	+	chr1_4:6663176-6663195	None:intergenic	35.0%
	TATACCCAAACGATCTTTAG+TGG	+	chr1_4:6663177-6663196	None:intergenic	35.0%
	ATCCTCTTGATCTTGTCATA+TGG	+	chr1_4:6663571-6663590	None:intergenic	35.0%
	ATATGACAAGATCAAGAGGA+TGG	-	chr1_4:6663570-6663589	Msa0146910:intron	35.0%
	AGAAGCTGCTCAATAAATTG+AGG	-	chr1_4:6663942-6663961	Msa0146910:intron	35.0%
	GAAGCTGCTCAATAAATTGA+GGG	-	chr1_4:6663943-6663962	Msa0146910:intron	35.0%
	CCAAGCCCAAAAAAGTTCAT+GGG	-	chr1_4:6660441-6660460	Msa0146910:three_prime_UTR	40.0%
!!	TTTTGAGAATCTGTTTCCGG+CGG	+	chr1_4:6660569-6660588	None:intergenic	40.0%
	TCAAAAATGGTTTCCGGATC+AGG	-	chr1_4:6660583-6660602	Msa0146910:three_prime_UTR	40.0%
	GAAGAAATTTGTGCTTCAGG+TGG	-	chr1_4:6660718-6660737	Msa0146910:three_prime_UTR	40.0%
	AAGTGAATAGGACCATGAGA+AGG	+	chr1_4:6660802-6660821	None:intergenic	40.0%
	CTCATGGTCCTATTCACTTT+AGG	-	chr1_4:6660803-6660822	Msa0146910:CDS	40.0%
!!!	TAGCTGTTGAGTGTTTTTGG+AGG	-	chr1_4:6661290-6661309	Msa0146910:CDS	40.0%
!!!	AGCTGTTGAGTGTTTTTGGA+GGG	-	chr1_4:6661291-6661310	Msa0146910:CDS	40.0%
	ATGATACCCACAGATGCTAT+AGG	-	chr1_4:6661687-6661706	Msa0146910:intron	40.0%
	AACACTTCTCAAAAACCCTC+CGG	+	chr1_4:6661884-6661903	None:intergenic	40.0%
!!	TCATTACTGATTCCCCCATA+AGG	-	chr1_4:6661920-6661939	Msa0146910:intron	40.0%
	GATTCCCCCATAAGGTAATT+TGG	-	chr1_4:6661928-6661947	Msa0146910:intron	40.0%
!	GTAGAATGCTTTCTTTTGGG+AGG	-	chr1_4:6662244-6662263	Msa0146910:intron	40.0%
!!!	GGTTTGCCAAAAGTGTTTTG+TGG	-	chr1_4:6662266-6662285	Msa0146910:intron	40.0%
	CACAAGATCTAGACAACACA+AGG	+	chr1_4:6662443-6662462	None:intergenic	40.0%
!!	GTAATTGGCTTGGTGATGTT+TGG	-	chr1_4:6662500-6662519	Msa0146910:intron	40.0%
!	GTAGAATGTCCTCTTTTTGG+AGG	-	chr1_4:6662955-6662974	Msa0146910:intron	40.0%
	GACTCATGGTTGTCAAAATC+GGG	-	chr1_4:6663148-6663167	Msa0146910:intron	40.0%
	GATCCCACTAAAGATCGTTT+GGG	-	chr1_4:6663170-6663189	Msa0146910:intron	40.0%
!	TGTAGAATGCTGTCTTTTGG+AGG	-	chr1_4:6663276-6663295	Msa0146910:intron	40.0%
!	GTAGAATGCTGTCTTTTGGA+GGG	-	chr1_4:6663277-6663296	Msa0146910:intron	40.0%
!	TGTTGTTAAGTGTTGCGTGA+TGG	-	chr1_4:6663433-6663452	Msa0146910:intron	40.0%
	TTGATCTTGTCATATGGAGG+AGG	+	chr1_4:6663565-6663584	None:intergenic	40.0%
	CTCTTGATCTTGTCATATGG+AGG	+	chr1_4:6663568-6663587	None:intergenic	40.0%
	CTCCATATGACAAGATCAAG+AGG	-	chr1_4:6663566-6663585	Msa0146910:intron	40.0%
!	TGGTTCTTACTTGAGAGCAT+CGG	+	chr1_4:6663602-6663621	None:intergenic	40.0%
!!	TAGGGTGTTGAGACTTCAAA+AGG	-	chr1_4:6663708-6663727	Msa0146910:intron	40.0%
!!	AGGGTGTTGAGACTTCAAAA+GGG	-	chr1_4:6663709-6663728	Msa0146910:intron	40.0%
!	GGTTTCTTGTTTATAGGAGC+TGG	-	chr1_4:6663877-6663896	Msa0146910:intron	40.0%
!	TTCTTGTTTATAGGAGCTGG+AGG	-	chr1_4:6663880-6663899	Msa0146910:intron	40.0%
	GGATTATTGATGCTGCCAAT+AGG	-	chr1_4:6664294-6664313	Msa0146910:five_prime_UTR	40.0%
	CAGGATATTTAGGCACCTAT+TGG	+	chr1_4:6664312-6664331	None:intergenic	40.0%
!	GGCCCAACATGAACTGTTTT+AGG	+	chr1_4:6660423-6660442	None:intergenic	45.0%
	GCCAAGCCCAAAAAAGTTCA+TGG	-	chr1_4:6660440-6660459	Msa0146910:three_prime_UTR	45.0%
!!!	CCCATGAACTTTTTTGGGCT+TGG	+	chr1_4:6660444-6660463	None:intergenic	45.0%
!!	ACAGCTAGGGTTTGATGATG+AGG	+	chr1_4:6660525-6660544	None:intergenic	45.0%
	GTGCGCCAAAAGATCTTAGA+GGG	+	chr1_4:6660832-6660851	None:intergenic	45.0%
	AGTGCGCCAAAAGATCTTAG+AGG	+	chr1_4:6660833-6660852	None:intergenic	45.0%
	TTGCGACCTATAGCATCTGT+GGG	+	chr1_4:6661696-6661715	None:intergenic	45.0%
	TTTGCGACCTATAGCATCTG+TGG	+	chr1_4:6661697-6661716	None:intergenic	45.0%
	AATGTTGTGTTGTGTTCCGG+AGG	-	chr1_4:6661865-6661884	Msa0146910:intron	45.0%
	ATGTTGTGTTGTGTTCCGGA+GGG	-	chr1_4:6661866-6661885	Msa0146910:intron	45.0%
	GGATCCCACTAAAGATCGTT+TGG	-	chr1_4:6663169-6663188	Msa0146910:intron	45.0%
	ATACCACACAAGACTAAGCG+TGG	-	chr1_4:6663499-6663518	Msa0146910:intron	45.0%
!!	GGTTCTTACTTGAGAGCATC+GGG	+	chr1_4:6663601-6663620	None:intergenic	45.0%
	GGACACAAATACTGCTTGCT+CGG	-	chr1_4:6663730-6663749	Msa0146910:intron	45.0%
	AGTTGTCATCAGAGGTTGGA+TGG	-	chr1_4:6663755-6663774	Msa0146910:intron	45.0%
	TCAGAGGTTGGATGGAACTA+CGG	-	chr1_4:6663763-6663782	Msa0146910:intron	45.0%
	TATAGGAGCTGGAGGATAAG+AGG	-	chr1_4:6663888-6663907	Msa0146910:intron	45.0%
	TTCCAATAGTGTTGCCCCTT+TGG	-	chr1_4:6664210-6664229	Msa0146910:CDS	45.0%
!!!	TTTTTTTTATTATTTGATAA+TGG	-	chr1_4:6662337-6662356	Msa0146910:intron	5.0%
!!!	TTTTTTTATTATTTGATAAT+GGG	-	chr1_4:6662338-6662357	Msa0146910:intron	5.0%
	CTTAGCGCATATGCCTGATC+CGG	+	chr1_4:6660599-6660618	None:intergenic	50.0%
	TTGCGACAATGGAGGCAAGA+CGG	+	chr1_4:6660657-6660676	None:intergenic	50.0%
	TCTTGCCTCCATTGTCGCAA+AGG	-	chr1_4:6660657-6660676	Msa0146910:three_prime_UTR	50.0%
	AAGCTCCTTTGCGACAATGG+AGG	+	chr1_4:6660665-6660684	None:intergenic	50.0%
	GAGAAGCTCCTTTGCGACAA+TGG	+	chr1_4:6660668-6660687	None:intergenic	50.0%
	GTCGCAAAGGAGCTTCTCAA+TGG	-	chr1_4:6660670-6660689	Msa0146910:three_prime_UTR	50.0%
	GGAGCTTCTCAATGGTCAGA+AGG	-	chr1_4:6660678-6660697	Msa0146910:three_prime_UTR	50.0%
	GCTTCTCAATGGTCAGAAGG+TGG	-	chr1_4:6660681-6660700	Msa0146910:three_prime_UTR	50.0%
	GAGGGAGCCCTAAAGTGAAT+AGG	+	chr1_4:6660814-6660833	None:intergenic	50.0%
!!!	GGGCTCCCTCTAAGATCTTT+TGG	-	chr1_4:6660824-6660843	Msa0146910:CDS	50.0%
!	ATCTTTTGGCGCACTGTTCG+TGG	-	chr1_4:6660838-6660857	Msa0146910:CDS	50.0%
!	TCTTTTGGCGCACTGTTCGT+GGG	-	chr1_4:6660839-6660858	Msa0146910:CDS	50.0%
!!	TCTCCACGCTTAGTCTTGTG+TGG	+	chr1_4:6663505-6663524	None:intergenic	50.0%
	ACACAAGACTAAGCGTGGAG+AGG	-	chr1_4:6663504-6663523	Msa0146910:intron	50.0%
	GCGCGATTGAAGGTCTATGA+GGG	-	chr1_4:6663535-6663554	Msa0146910:intron	50.0%
	GGACAGTTGTCATCAGAGGT+TGG	-	chr1_4:6663751-6663770	Msa0146910:intron	50.0%
	GAACTACGGTGGCATCATCA+AGG	-	chr1_4:6663777-6663796	Msa0146910:intron	50.0%
!!	AGCAAGGACTTCAAGTTGGG+GGG	+	chr1_4:6664002-6664021	None:intergenic	50.0%
!!	GAGCAAGGACTTCAAGTTGG+GGG	+	chr1_4:6664003-6664022	None:intergenic	50.0%
!!	GGAGCAAGGACTTCAAGTTG+GGG	+	chr1_4:6664004-6664023	None:intergenic	50.0%
!	GGGAGCAAGGACTTCAAGTT+GGG	+	chr1_4:6664005-6664024	None:intergenic	50.0%
	CTCAGTACTTAACGGGAGCA+AGG	+	chr1_4:6664018-6664037	None:intergenic	50.0%
	CACCAAAGGGGCAACACTAT+TGG	+	chr1_4:6664215-6664234	None:intergenic	50.0%
	GTACTTTCACCTTGTGCTCG+CGG	-	chr1_4:6664360-6664379	Msa0146910:five_prime_UTR	50.0%
	ATGAAGTTTCCGCGAGCACA+AGG	+	chr1_4:6664372-6664391	None:intergenic	50.0%
	CATCAAACCCTAGCTGTCCC+CGG	-	chr1_4:6660528-6660547	Msa0146910:three_prime_UTR	55.0%
	TTCTTCTCCGGGGACAGCTA+GGG	+	chr1_4:6660538-6660557	None:intergenic	55.0%
	CGCGCGATTGAAGGTCTATG+AGG	-	chr1_4:6663534-6663553	Msa0146910:intron	55.0%
	GCTCGGACAGTTGTCATCAG+AGG	-	chr1_4:6663747-6663766	Msa0146910:intron	55.0%
	GAGGTTGGATGGAACTACGG+TGG	-	chr1_4:6663766-6663785	Msa0146910:intron	55.0%
	GGAGCTGGAGGATAAGAGGA+AGG	-	chr1_4:6663892-6663911	Msa0146910:intron	55.0%
	GATAAGAGGAAGGAACGCGC+AGG	-	chr1_4:6663902-6663921	Msa0146910:intron	55.0%
	CGGGAGCAAGGACTTCAAGT+TGG	+	chr1_4:6664006-6664025	None:intergenic	55.0%
	GTTCTTCTCCGGGGACAGCT+AGG	+	chr1_4:6660539-6660558	None:intergenic	60.0%
	GGCGAGGTTGTTCTTCTCCG+GGG	+	chr1_4:6660548-6660567	None:intergenic	60.0%
	CGGCGAGGTTGTTCTTCTCC+GGG	+	chr1_4:6660549-6660568	None:intergenic	60.0%
	GCGGCGAGGTTGTTCTTCTC+CGG	+	chr1_4:6660550-6660569	None:intergenic	60.0%
	GAGAAGAACAACCTCGCCGC+CGG	-	chr1_4:6660550-6660569	Msa0146910:three_prime_UTR	60.0%
	AGAATCTGTTTCCGGCGGCG+AGG	+	chr1_4:6660564-6660583	None:intergenic	60.0%
	GAGGAAGGAACGCGCAGGTT+TGG	-	chr1_4:6663907-6663926	Msa0146910:intron	60.0%
	CAAGACGGCCGAGCATGTGG+TGG	+	chr1_4:6660642-6660661	None:intergenic	65.0%
	AGGCAAGACGGCCGAGCATG+TGG	+	chr1_4:6660645-6660664	None:intergenic	65.0%
	GGCTGCACTCGCGCGATTGA+AGG	-	chr1_4:6663525-6663544	Msa0146910:intron	65.0%
	GACGCCCGCCACCACATGCT+CGG	-	chr1_4:6660631-6660650	Msa0146910:three_prime_UTR	70.0%
	ACGGCCGAGCATGTGGTGGC+GGG	+	chr1_4:6660638-6660657	None:intergenic	70.0%
	GACGGCCGAGCATGTGGTGG+CGG	+	chr1_4:6660639-6660658	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	6660404	6664415	6660404	ID=Msa0146910;Name=Msa0146910
chr1_4	mRNA	6660404	6664415	6660404	ID=Msa0146910-mRNA-1;Parent=Msa0146910;Name=Msa0146910-mRNA-1;_AED=0.11;_eAED=0.11;_QI=185\|1\|1\|1\|1\|1\|4\|379\|206
chr1_4	exon	6660404	6660926	6660404	ID=Msa0146910-mRNA-1:exon:2910;Parent=Msa0146910-mRNA-1
chr1_4	exon	6661021	6661108	6661021	ID=Msa0146910-mRNA-1:exon:2909;Parent=Msa0146910-mRNA-1
chr1_4	exon	6661208	6661324	6661208	ID=Msa0146910-mRNA-1:exon:2908;Parent=Msa0146910-mRNA-1
chr1_4	exon	6663959	6664415	6663959	ID=Msa0146910-mRNA-1:exon:2907;Parent=Msa0146910-mRNA-1
chr1_4	five_prime_UTR	6664231	6664415	6664231	ID=Msa0146910-mRNA-1:five_prime_utr;Parent=Msa0146910-mRNA-1
chr1_4	CDS	6663959	6664230	6663959	ID=Msa0146910-mRNA-1:cds;Parent=Msa0146910-mRNA-1
chr1_4	CDS	6661208	6661324	6661208	ID=Msa0146910-mRNA-1:cds;Parent=Msa0146910-mRNA-1
chr1_4	CDS	6661021	6661108	6661021	ID=Msa0146910-mRNA-1:cds;Parent=Msa0146910-mRNA-1
chr1_4	CDS	6660783	6660926	6660783	ID=Msa0146910-mRNA-1:cds;Parent=Msa0146910-mRNA-1
chr1_4	three_prime_UTR	6660404	6660782	6660404	ID=Msa0146910-mRNA-1:three_prime_utr;Parent=Msa0146910-mRNA-1

Gene Sequence

>Msa0146910

ATGGTTTCCGGATCAGGCATATGCGCTAAGAGAGTCGTGATCGACGCCCGCCACCACATGCTCGGCCGTCTTGCCTCCATTGTCGCAAAGGAGCTTCTCAATGGTCAGAAGGTGGTTCTTGTCAGATGTGAAGAAATTTGTGCTTCAGGTGGTCTTGTTAGACAGAAGATGAAGTATATGAGATTTCTAAGGAAGAGGATGAATACTAAACCTTCTCATGGTCCTATTCACTTTAGGGCTCCCTCTAAGATCTTTTGGCGCACTGTTCGTGGAATGATACCACACAAGACTAAGCGTGGAGAGGCTGCACTCGCGCGATTGAAGGTCTATGAGGGTATTCCTCCTCCATATGACAAGATCAAGAGGATGGTTGTTCCCGATGCTCTCAAGGTGTTGAGACTTCAAAAGGGACACAAATACTGCTTGCTCGGACAGTTGTCATCAGAGGTTGGATGGAACTACGGTGGCATCATCAAGGAGCTGGAGGATAAGAGGAAGGAACGCGCAGGTTTGGCTTACGAGAAAAAGAAGCTGCTCAATAAATTGAGGGCTAAAGCTGAGAAGATTGTAGACGAGAAGCTTGCCCCCCAACTTGAAGTCCTTGCTCCCGTTAAGTACTGA

Protein sequence

>Msa0146910

MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICASGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGEAALARLKVYEGIPPPYDKIKRMVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYGGIIKELEDKRKERAGLAYEKKKLLNKLRAKAEKIVDEKLAPQLEVLAPVKY*