Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514130 | XP_003601798.1 | 97.802 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 7.37e-131 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514130 | sp|P51413|RL172_ARATH | 88.000 | 175 | 21 | 0 | 1 | 175 | 1 | 175 | 1.03e-114 | 326 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514130 | G7JC06 | 97.802 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 3.52e-131 | 374 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003030 | Msa0514130 | 0.892056 | 2.256416e-74 | -8.615850e-47 |
| Msa0004760 | Msa0514130 | 0.856364 | 3.382185e-62 | -8.615850e-47 |
| Msa0004790 | Msa0514130 | 0.813541 | 2.429299e-51 | -8.615850e-47 |
| Msa0011160 | Msa0514130 | -0.833151 | 6.287892e-56 | -8.615850e-47 |
| Msa0015100 | Msa0514130 | -0.811996 | 5.293515e-51 | -8.615850e-47 |
| Msa0029000 | Msa0514130 | 0.852481 | 4.487695e-61 | -8.615850e-47 |
| Msa0042510 | Msa0514130 | 0.866280 | 3.200822e-65 | -8.615850e-47 |
| Msa0049770 | Msa0514130 | -0.813075 | 3.075268e-51 | -8.615850e-47 |
| Msa0051200 | Msa0514130 | -0.826908 | 2.095554e-54 | -8.615850e-47 |
| Msa0051460 | Msa0514130 | -0.836175 | 1.091607e-56 | -8.615850e-47 |
| Msa0063000 | Msa0514130 | -0.802487 | 5.480178e-49 | -8.615850e-47 |
| Msa0079560 | Msa0514130 | 0.868345 | 6.995365e-66 | -8.615850e-47 |
| Msa0093440 | Msa0514130 | -0.836665 | 8.193288e-57 | -8.615850e-47 |
| Msa0094600 | Msa0514130 | 0.810308 | 1.229481e-50 | -8.615850e-47 |
| Msa0094940 | Msa0514130 | 0.834417 | 3.034399e-56 | -8.615850e-47 |
| Msa0101840 | Msa0514130 | -0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0127230 | Msa0514130 | 0.873098 | 1.912180e-67 | -8.615850e-47 |
| Msa0143920 | Msa0514130 | -0.823505 | 1.336208e-53 | -8.615850e-47 |
| Msa0146910 | Msa0514130 | 0.892212 | 1.954723e-74 | -8.615850e-47 |
| Msa0164830 | Msa0514130 | -0.802744 | 4.851937e-49 | -8.615850e-47 |
| Msa0213090 | Msa0514130 | -0.801025 | 1.093842e-48 | -8.615850e-47 |
| Msa0226620 | Msa0514130 | 0.836472 | 9.172441e-57 | -8.615850e-47 |
| Msa0373350 | Msa0514130 | 0.927438 | 1.175774e-91 | -8.615850e-47 |
| Msa0376850 | Msa0514130 | 0.813206 | 2.878006e-51 | -8.615850e-47 |
| Msa0377610 | Msa0514130 | 0.924528 | 6.243531e-90 | -8.615850e-47 |
| Msa0379820 | Msa0514130 | -0.828231 | 1.008271e-54 | -8.615850e-47 |
| Msa0379850 | Msa0514130 | -0.828369 | 9.342664e-55 | -8.615850e-47 |
| Msa0381600 | Msa0514130 | 0.815633 | 8.364608e-52 | -8.615850e-47 |
| Msa0383490 | Msa0514130 | 0.872524 | 2.976703e-67 | -8.615850e-47 |
| Msa0388520 | Msa0514130 | 0.807390 | 5.174509e-50 | -8.615850e-47 |
| Msa0388540 | Msa0514130 | 0.896232 | 4.493912e-76 | -8.615850e-47 |
| Msa0421920 | Msa0514130 | 0.932839 | 4.653167e-95 | -8.615850e-47 |
| Msa0426820 | Msa0514130 | 0.921490 | 3.344349e-88 | -8.615850e-47 |
| Msa0427380 | Msa0514130 | 0.893465 | 6.129208e-75 | -8.615850e-47 |
| Msa0429170 | Msa0514130 | -0.827242 | 1.743587e-54 | -8.615850e-47 |
| Msa0438050 | Msa0514130 | -0.840525 | 8.251055e-58 | -8.615850e-47 |
| Msa0440040 | Msa0514130 | -0.817586 | 3.053346e-52 | -8.615850e-47 |
| Msa0457010 | Msa0514130 | -0.808683 | 2.745005e-50 | -8.615850e-47 |
| Msa0467740 | Msa0514130 | 0.998781 | 2.276899e-276 | -8.615850e-47 |
| Msa0470230 | Msa0514130 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0477670 | Msa0514130 | 0.831201 | 1.908728e-55 | -8.615850e-47 |
| Msa0482190 | Msa0514130 | 0.811982 | 5.331123e-51 | -8.615850e-47 |
| Msa0256350 | Msa0514130 | 0.819229 | 1.296074e-52 | -8.615850e-47 |
| Msa0260270 | Msa0514130 | 0.840690 | 7.471479e-58 | -8.615850e-47 |
| Msa0266000 | Msa0514130 | 0.835096 | 2.047672e-56 | -8.615850e-47 |
| Msa0304270 | Msa0514130 | 0.821111 | 4.804464e-53 | -8.615850e-47 |
| Msa0304310 | Msa0514130 | 0.801366 | 9.314932e-49 | -8.615850e-47 |
| Msa0334170 | Msa0514130 | -0.818795 | 1.626583e-52 | -8.615850e-47 |
| Msa0485500 | Msa0514130 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa0492740 | Msa0514130 | -0.819351 | 1.215633e-52 | -8.615850e-47 |
| Msa0492880 | Msa0514130 | -0.810844 | 9.417425e-51 | -8.615850e-47 |
| Msa0514130 | Msa0516830 | 0.813204 | 2.881672e-51 | -8.615850e-47 |
| Msa0514130 | Msa0524340 | 0.816084 | 6.635508e-52 | -8.615850e-47 |
| Msa0514130 | Msa0527900 | -0.819447 | 1.155904e-52 | -8.615850e-47 |
| Msa0514130 | Msa0532810 | 0.864379 | 1.268498e-64 | -8.615850e-47 |
| Msa0514130 | Msa0543900 | -0.809908 | 1.499461e-50 | -8.615850e-47 |
| Msa0514130 | Msa0544930 | -0.805277 | 1.442915e-49 | -8.615850e-47 |
| Msa0514130 | Msa0578010 | 0.819741 | 9.901894e-53 | -8.615850e-47 |
| Msa0514130 | Msa0586150 | -0.809875 | 1.524295e-50 | -8.615850e-47 |
| Msa0514130 | Msa0599770 | -0.803882 | 2.820238e-49 | -8.615850e-47 |
| Msa0514130 | Msa0610380 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0514130 | Msa0610890 | -0.809803 | 1.579477e-50 | -8.615850e-47 |
| Msa0514130 | Msa0621170 | 0.805429 | 1.340682e-49 | -8.615850e-47 |
| Msa0514130 | Msa0621190 | 0.891059 | 5.608001e-74 | -8.615850e-47 |
| Msa0514130 | Msa0621750 | 0.822501 | 2.290343e-53 | -8.615850e-47 |
| Msa0514130 | Msa0635470 | -0.831210 | 1.899229e-55 | -8.615850e-47 |
| Msa0514130 | Msa0640380 | -0.822349 | 2.484194e-53 | -8.615850e-47 |
| Msa0514130 | Msa0641020 | -0.829137 | 6.090746e-55 | -8.615850e-47 |
| Msa0514130 | Msa0641030 | -0.804137 | 2.495738e-49 | -8.615850e-47 |
| Msa0514130 | Msa0650910 | 0.815961 | 7.070210e-52 | -8.615850e-47 |
| Msa0514130 | Msa0656450 | 0.855165 | 7.575471e-62 | -8.615850e-47 |
| Msa0514130 | Msa0658570 | -0.824918 | 6.221435e-54 | -8.615850e-47 |
| Msa0514130 | Msa0660870 | -0.844608 | 6.803348e-59 | -8.615850e-47 |
| Msa0514130 | Msa0663330 | -0.849805 | 2.554683e-60 | -8.615850e-47 |
| Msa0514130 | Msa0664020 | -0.851794 | 7.037826e-61 | -8.615850e-47 |
| Msa0514130 | Msa0678820 | -0.807814 | 4.205979e-50 | -8.615850e-47 |
| Msa0514130 | Msa0679560 | -0.801775 | 7.678161e-49 | -8.615850e-47 |
| Msa0514130 | Msa0691760 | 0.839893 | 1.206687e-57 | -8.615850e-47 |
| Msa0514130 | Msa0692850 | 0.828282 | 9.804639e-55 | -8.615850e-47 |
| Msa0514130 | Msa0700370 | 0.901189 | 3.444316e-78 | -8.615850e-47 |
| Msa0514130 | Msa0703490 | -0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0514130 | Msa0715720 | -0.816715 | 4.792939e-52 | -8.615850e-47 |
| Msa0514130 | Msa0716750 | -0.838985 | 2.076725e-57 | -8.615850e-47 |
| Msa0514130 | Msa0722930 | -0.802996 | 4.303892e-49 | -8.615850e-47 |
| Msa0514130 | Msa0723140 | -0.805375 | 1.376187e-49 | -8.615850e-47 |
| Msa0514130 | Msa0757980 | -0.804471 | 2.126656e-49 | -8.615850e-47 |
| Msa0514130 | Msa0776030 | -0.827662 | 1.382419e-54 | -8.615850e-47 |
| Msa0514130 | Msa0799280 | -0.841394 | 4.880006e-58 | -8.615850e-47 |
| Msa0514130 | Msa0837500 | -0.806342 | 8.617723e-50 | -8.615850e-47 |
| Msa0514130 | Msa0839230 | -0.807948 | 3.938210e-50 | -8.615850e-47 |
| Msa0514130 | Msa0876850 | 0.828271 | 9.866538e-55 | -8.615850e-47 |
| Msa0514130 | Msa0881160 | -0.800729 | 1.257343e-48 | -8.615850e-47 |
| Msa0514130 | Msa0881210 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0514130 | Msa0912470 | -0.827203 | 1.781151e-54 | -8.615850e-47 |
| Msa0514130 | Msa0930360 | 0.838075 | 3.565851e-57 | -8.615850e-47 |
| Msa0514130 | Msa0942080 | 0.838908 | 2.174375e-57 | -8.615850e-47 |
| Msa0514130 | Msa0987570 | 0.827525 | 1.491101e-54 | -8.615850e-47 |
| Msa0514130 | Msa0998890 | 0.898250 | 6.379144e-77 | -8.615850e-47 |
| Msa0514130 | Msa1001200 | -0.823727 | 1.185507e-53 | -8.615850e-47 |
| Msa0514130 | Msa1027870 | 0.843967 | 1.011429e-58 | -8.615850e-47 |
| Msa0514130 | Msa1041600 | 0.864421 | 1.231144e-64 | -8.615850e-47 |
| Msa0514130 | Msa1068200 | 0.818141 | 2.288714e-52 | -8.615850e-47 |
| Msa0514130 | Msa1075080 | 0.866704 | 2.346662e-65 | -8.615850e-47 |
| Msa0514130 | Msa1075220 | 0.817178 | 3.772209e-52 | -8.615850e-47 |
| Msa0514130 | Msa1080790 | -0.826191 | 3.105882e-54 | -8.615850e-47 |
| Msa0514130 | Msa1084850 | 0.835009 | 2.153626e-56 | -8.615850e-47 |
| Msa0514130 | Msa1118930 | -0.821803 | 3.324343e-53 | -8.615850e-47 |
| Msa0514130 | Msa1132950 | -0.800664 | 1.295859e-48 | -8.615850e-47 |
| Msa0514130 | Msa1139000 | 0.829064 | 6.343929e-55 | -8.615850e-47 |
| Msa0514130 | Msa1144630 | 0.857233 | 1.876604e-62 | -8.615850e-47 |
| Msa0514130 | Msa1156340 | 0.823286 | 1.503463e-53 | -8.615850e-47 |
| Msa0514130 | Msa1162550 | 0.808619 | 2.833121e-50 | -8.615850e-47 |
| Msa0514130 | Msa1165700 | 0.918426 | 1.580994e-86 | -8.615850e-47 |
| Msa0514130 | Msa1166500 | 0.862178 | 6.092553e-64 | -8.615850e-47 |
| Msa0514130 | Msa1184530 | -0.801520 | 8.660873e-49 | -8.615850e-47 |
| Msa0514130 | Msa1208340 | -0.811912 | 5.522400e-51 | -8.615850e-47 |
| Msa0514130 | Msa1209560 | -0.857425 | 1.646784e-62 | -8.615850e-47 |
| Msa0514130 | Msa1225730 | 0.849825 | 2.521767e-60 | -8.615850e-47 |
| Msa0514130 | Msa1227350 | 0.839405 | 1.615743e-57 | -8.615850e-47 |
| Msa0514130 | Msa1246040 | -0.856495 | 3.096021e-62 | -8.615850e-47 |
| Msa0514130 | Msa1258380 | 0.812352 | 4.426360e-51 | -8.615850e-47 |
| Msa0514130 | Msa1264860 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0514130 | Msa1284800 | 0.850667 | 1.463781e-60 | -8.615850e-47 |
| Msa0514130 | Msa1298910 | -0.824049 | 9.960746e-54 | -8.615850e-47 |
| Msa0514130 | Msa1309880 | -0.816858 | 4.451534e-52 | -8.615850e-47 |
| Msa0514130 | Msa1330530 | -0.827867 | 1.234013e-54 | -8.615850e-47 |
| Msa0514130 | Msa1363930 | 0.856514 | 3.056309e-62 | -8.615850e-47 |
| Msa0514130 | Msa1365040 | 0.820521 | 6.564399e-53 | -8.615850e-47 |
| Msa0514130 | Msa1366540 | 0.876527 | 1.301307e-68 | -8.615850e-47 |
| Msa0514130 | Msa1376890 | -0.823403 | 1.411647e-53 | -8.615850e-47 |
| Msa0514130 | Msa1377070 | -0.826860 | 2.151472e-54 | -8.615850e-47 |
| Msa0514130 | Msa1387750 | 0.902473 | 9.356300e-79 | -8.615850e-47 |
| Msa0514130 | Msa1390160 | 0.806709 | 7.212185e-50 | -8.615850e-47 |
| Msa0514130 | Msa1407650 | -0.803652 | 3.147492e-49 | -8.615850e-47 |
| Msa0514130 | Msa1413570 | 0.846269 | 2.414382e-59 | -8.615850e-47 |
| Msa0514130 | Msa1416140 | 0.870310 | 1.607365e-66 | -8.615850e-47 |
| Msa0514130 | Msa1438820 | -0.805000 | 1.648906e-49 | -8.615850e-47 |
| Msa0514130 | Msa1444250 | 0.801680 | 8.033381e-49 | -8.615850e-47 |
| Msa0514130 | Msa1445250 | -0.824061 | 9.898181e-54 | -8.615850e-47 |
| Msa0514130 | Msa1446510 | 0.814807 | 1.276495e-51 | -8.615850e-47 |
| Msa0514130 | Msa1451620 | 0.839373 | 1.647686e-57 | -8.615850e-47 |
| Msa0514130 | Msa1454860 | -0.808299 | 3.315344e-50 | -8.615850e-47 |
| Msa0514130 | Msa1457670 | 0.830300 | 3.174771e-55 | -8.615850e-47 |
| Msa0514130 | Msa1458550 | -0.810699 | 1.012165e-50 | -8.615850e-47 |
| Msa0514130 | Msa1461810 | 0.864697 | 1.009376e-64 | -8.615850e-47 |
| Msa0514130 | Msa1463510 | 0.810430 | 1.157062e-50 | -8.615850e-47 |
| Msa0514130 | Msa1465890 | 0.873646 | 1.251122e-67 | -8.615850e-47 |
| Msa0514130 | Msa1466810 | -0.822516 | 2.272572e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514130 | MtrunA17_Chr3g0122641 | 97.802 | 182 | 4 | 0 | 1 | 182 | 1 | 182 | 6.78e-135 | 374 |
| Msa0514130 | MtrunA17_Chr8g0377301 | 97.688 | 173 | 4 | 0 | 1 | 173 | 1 | 173 | 8.84e-128 | 356 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514130 | AT1G67430.1 | 88.000 | 175 | 21 | 0 | 1 | 175 | 1 | 175 | 1.05e-115 | 326 |
| Msa0514130 | AT1G27400.1 | 88.953 | 172 | 19 | 0 | 1 | 172 | 1 | 172 | 3.18e-115 | 325 |
| Msa0514130 | AT1G67430.2 | 65.143 | 175 | 17 | 1 | 1 | 175 | 1 | 131 | 1.09e-72 | 215 |
Find 71 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGAAGATTCAGCAAATT+AGG | 0.141947 | 3_4:+64815576 | None:intergenic |
| TCTTCATCATAAATTATTAT+TGG | 0.207122 | 3_4:-64813628 | Msa0514130:exon |
| TCTTCTTGTTTGTTGCCAAC+TGG | 0.236433 | 3_4:+64813674 | None:intergenic |
| AACATCTTCTAAGTATCTTT+TGG | 0.263817 | 3_4:+64814343 | None:intergenic |
| CTGACATAATCTATAAATAA+AGG | 0.277715 | 3_4:+64813589 | None:intergenic |
| AACAACGCAATACCTCTTTC+TGG | 0.294555 | 3_4:+64813778 | None:intergenic |
| AAGATACTTAGAAGATGTTT+TGG | 0.295183 | 3_4:-64814339 | Msa0514130:CDS |
| GGTGGGATTGTCGGGCTCTT+TGG | 0.298164 | 3_4:+64815491 | None:intergenic |
| CTTCTTGTTTGTTGCCAACT+GGG | 0.310845 | 3_4:+64813675 | None:intergenic |
| GTTTGTTGCCAACTGGGTCT+CGG | 0.315567 | 3_4:+64813681 | None:intergenic |
| AACCCTAAGGTCAGCACCTC+TGG | 0.343663 | 3_4:+64815349 | None:intergenic |
| GACGTTTCTGTCGTGGTGTT+GGG | 0.366723 | 3_4:-64814292 | Msa0514130:CDS |
| AGGCCAGAGGTGCTGACCTT+AGG | 0.368932 | 3_4:-64815352 | Msa0514130:CDS |
| TGAGAAGATTCAGCAAATTA+GGG | 0.370437 | 3_4:+64815577 | None:intergenic |
| AAATAAAGGGTCTCAACTAT+TGG | 0.372508 | 3_4:+64813603 | None:intergenic |
| TAGAGTGTCTGTTCTTAGCT+TGG | 0.376754 | 3_4:+64814261 | None:intergenic |
| TGACCTTAGGGTTCATTTCA+AGG | 0.383447 | 3_4:-64815339 | Msa0514130:intron |
| AAGGTCAGCACCTCTGGCCT+TGG | 0.384955 | 3_4:+64815355 | None:intergenic |
| TTACATTTGGTGGGATTGTC+GGG | 0.385846 | 3_4:+64815483 | None:intergenic |
| GGCTGCTCTACTAATTCGTC+AGG | 0.391386 | 3_4:+64815527 | None:intergenic |
| GGCCAGAGGTGCTGACCTTA+GGG | 0.395315 | 3_4:-64815351 | Msa0514130:CDS |
| AGACGTTTCTGTCGTGGTGT+TGG | 0.397264 | 3_4:-64814293 | Msa0514130:CDS |
| AGAGTGTCTGTTCTTAGCTT+GGG | 0.404467 | 3_4:+64814262 | None:intergenic |
| GCTAAGAACAGACACTCTAA+TGG | 0.408761 | 3_4:-64814257 | Msa0514130:CDS |
| TTTGTTGCCAACTGGGTCTC+GGG | 0.429555 | 3_4:+64813682 | None:intergenic |
| GGGAAACAGCGTTTGCCATC+AGG | 0.433818 | 3_4:-64814385 | Msa0514130:CDS |
| TGACATAATCTATAAATAAA+GGG | 0.439008 | 3_4:+64813590 | None:intergenic |
| ATTACATTTGGTGGGATTGT+CGG | 0.454131 | 3_4:+64815482 | None:intergenic |
| TCACTTCTAGGTGAAAGGTT+TGG | 0.454273 | 3_4:-64814046 | Msa0514130:intron |
| CTAAGAACAGACACTCTAAT+GGG | 0.469410 | 3_4:-64814256 | Msa0514130:CDS |
| GATGGCAAACGCTGTTTCCC+TGG | 0.472125 | 3_4:+64814388 | None:intergenic |
| ATGAATTTAGCTGACTTGAC+AGG | 0.481469 | 3_4:+64814221 | None:intergenic |
| CTCTTAACACAAACAAGAAA+AGG | 0.485766 | 3_4:+64813378 | None:intergenic |
| TTTATGTTAATTGACTTGCT+TGG | 0.485985 | 3_4:-64813483 | Msa0514130:three_prime_UTR |
| TGAAAGGAATGGCCTGTTTG+TGG | 0.487121 | 3_4:+64814315 | None:intergenic |
| AACAAAGAAGACGTACCTAC+AGG | 0.490498 | 3_4:-64813975 | Msa0514130:CDS |
| GAAAGGAATGGCCTGTTTGT+GGG | 0.496437 | 3_4:+64814316 | None:intergenic |
| CCTTTCAGACGTTTCTGTCG+TGG | 0.497413 | 3_4:-64814299 | Msa0514130:CDS |
| ATTGTTCACTTCTAGGTGAA+AGG | 0.499870 | 3_4:-64814051 | Msa0514130:intron |
| AGACGTACCTACAGGGCTCA+TGG | 0.520971 | 3_4:-64813967 | Msa0514130:CDS |
| ACTCTAATGGGCAAGGACGC+TGG | 0.524787 | 3_4:-64814244 | Msa0514130:CDS |
| AGAGAGGAATTACATTTGGT+GGG | 0.528638 | 3_4:+64815474 | None:intergenic |
| TCTCTACGTGTCTCATATCC+AGG | 0.529280 | 3_4:-64814013 | Msa0514130:CDS |
| GAGAGAGGAATTACATTTGG+TGG | 0.535354 | 3_4:+64815473 | None:intergenic |
| ATCTGTAATTGCAGCAACCA+AGG | 0.554826 | 3_4:-64815372 | Msa0514130:intron |
| GGTCAGGGGCAACTTCCTGA+TGG | 0.558655 | 3_4:+64814370 | None:intergenic |
| GGAAGAGGCTGTCCAGAAAG+AGG | 0.559016 | 3_4:-64813790 | Msa0514130:intron |
| GATTCTTCCATGAGCCCTGT+AGG | 0.559080 | 3_4:+64813960 | None:intergenic |
| TTACCTTGAAATGAACCCTA+AGG | 0.566981 | 3_4:+64815336 | None:intergenic |
| ACGAATTAGTAGAGCAGCCA+TGG | 0.572014 | 3_4:-64815523 | Msa0514130:exon |
| GATACTATCTGAGAAGGAAG+AGG | 0.578357 | 3_4:-64813805 | Msa0514130:CDS |
| CCACGACAGAAACGTCTGAA+AGG | 0.578584 | 3_4:+64814299 | None:intergenic |
| GCTGCTCTACTAATTCGTCA+GGG | 0.587405 | 3_4:+64815528 | None:intergenic |
| AAAGGACGTGCAAAACTCAA+AGG | 0.597080 | 3_4:+64813396 | None:intergenic |
| TGAACTCGATTGTGGGAAGG+AGG | 0.598251 | 3_4:+64815553 | None:intergenic |
| CTAGGTGAAAGGTTTGGATG+TGG | 0.599987 | 3_4:-64814040 | Msa0514130:intron |
| TCTGTAGCCCGAGACCCAGT+TGG | 0.601405 | 3_4:-64813689 | Msa0514130:intron |
| GGGTGAACTCGATTGTGGGA+AGG | 0.604988 | 3_4:+64815550 | None:intergenic |
| GTTTCTGTCGTGGTGTTGGG+AGG | 0.606753 | 3_4:-64814289 | Msa0514130:CDS |
| CTCTTTGGAGTACTTCACCA+TGG | 0.611437 | 3_4:+64815506 | None:intergenic |
| CTGCTCTACTAATTCGTCAG+GGG | 0.613216 | 3_4:+64815529 | None:intergenic |
| ACAAAGAAGACGTACCTACA+GGG | 0.613276 | 3_4:-64813974 | Msa0514130:CDS |
| CGAACTGATACTATCTGAGA+AGG | 0.615825 | 3_4:-64813811 | Msa0514130:CDS |
| AACAGACACTCTAATGGGCA+AGG | 0.616551 | 3_4:-64814251 | Msa0514130:CDS |
| ACAGAAACGTCTGAAAGGAA+TGG | 0.620803 | 3_4:+64814304 | None:intergenic |
| TGCTCTACTAATTCGTCAGG+GGG | 0.629328 | 3_4:+64815530 | None:intergenic |
| AAGTCTCAAGCTGTTCGAAG+TGG | 0.631486 | 3_4:-64813652 | Msa0514130:CDS |
| AGTATCAGTTCGATGTGGCA+AGG | 0.635093 | 3_4:+64813822 | None:intergenic |
| ATTGCAGCAACCAAGGCCAG+AGG | 0.682613 | 3_4:-64815365 | Msa0514130:intron |
| GTGGCAAGGAGATGACATGT+AGG | 0.691037 | 3_4:+64813836 | None:intergenic |
| CAGATAGTATCAGTTCGATG+TGG | 0.705561 | 3_4:+64813817 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAATACATATGAA+GGG | + | chr3_4:64814315-64814334 | None:intergenic | 10.0% |
| !! | TTAAAAATAAATACATATGA+AGG | + | chr3_4:64814316-64814335 | None:intergenic | 10.0% |
| !! | TAAAAATAAATACATATGAA+GGG | + | chr3_4:64814315-64814334 | None:intergenic | 10.0% |
| !! | TTAAAAATAAATACATATGA+AGG | + | chr3_4:64814316-64814335 | None:intergenic | 10.0% |
| !!! | AATTAACTTTTTTATCCAAA+AGG | + | chr3_4:64814044-64814063 | None:intergenic | 15.0% |
| !! | TCTTCATCATAAATTATTAT+TGG | - | chr3_4:64815334-64815353 | Msa0514130:intron | 15.0% |
| !! | TGACATAATCTATAAATAAA+GGG | + | chr3_4:64815375-64815394 | None:intergenic | 15.0% |
| !!! | AATTAACTTTTTTATCCAAA+AGG | + | chr3_4:64814044-64814063 | None:intergenic | 15.0% |
| !! | TCTTCATCATAAATTATTAT+TGG | - | chr3_4:64815334-64815353 | Msa0514130:intron | 15.0% |
| !! | TGACATAATCTATAAATAAA+GGG | + | chr3_4:64815375-64815394 | None:intergenic | 15.0% |
| !! | GATTAATTTAACCTAATTTG+TGG | - | chr3_4:64813562-64813581 | Msa0514130:three_prime_UTR | 20.0% |
| !! | TATTATTCATAATCTTGTCA+AGG | - | chr3_4:64813828-64813847 | Msa0514130:CDS | 20.0% |
| !!! | CGGTGTTTTTTTTTTTTTTT+TGG | - | chr3_4:64815100-64815119 | Msa0514130:intron | 20.0% |
| !! | CTGACATAATCTATAAATAA+AGG | + | chr3_4:64815376-64815395 | None:intergenic | 20.0% |
| !! | GATTAATTTAACCTAATTTG+TGG | - | chr3_4:64813562-64813581 | Msa0514130:three_prime_UTR | 20.0% |
| !! | TATTATTCATAATCTTGTCA+AGG | - | chr3_4:64813828-64813847 | Msa0514130:CDS | 20.0% |
| !!! | CGGTGTTTTTTTTTTTTTTT+TGG | - | chr3_4:64815100-64815119 | Msa0514130:intron | 20.0% |
| !! | CTGACATAATCTATAAATAA+AGG | + | chr3_4:64815376-64815395 | None:intergenic | 20.0% |
| ! | ACAAAATGCAATTTCTCTAT+AGG | + | chr3_4:64813989-64814008 | None:intergenic | 25.0% |
| !!! | ACTTTTTTATCCAAAAGGTA+AGG | + | chr3_4:64814039-64814058 | None:intergenic | 25.0% |
| !! | ATCAGTAGATTAGTTGAAAA+TGG | - | chr3_4:64814267-64814286 | Msa0514130:CDS | 25.0% |
| ! | ATTAGTTGAAAATGGTCATT+TGG | - | chr3_4:64814275-64814294 | Msa0514130:CDS | 25.0% |
| !! | AACATCTTCTAAGTATCTTT+TGG | + | chr3_4:64814622-64814641 | None:intergenic | 25.0% |
| !! | AAGATACTTAGAAGATGTTT+TGG | - | chr3_4:64814623-64814642 | Msa0514130:intron | 25.0% |
| ! | GCATTCTTATACTTATATAC+TGG | - | chr3_4:64815077-64815096 | Msa0514130:intron | 25.0% |
| ! | TTCTTATACTTATATACTGG+CGG | - | chr3_4:64815080-64815099 | Msa0514130:intron | 25.0% |
| !!! | TTTATGTTAATTGACTTGCT+TGG | - | chr3_4:64815479-64815498 | Msa0514130:intron | 25.0% |
| ! | ACAAAATGCAATTTCTCTAT+AGG | + | chr3_4:64813989-64814008 | None:intergenic | 25.0% |
| !!! | ACTTTTTTATCCAAAAGGTA+AGG | + | chr3_4:64814039-64814058 | None:intergenic | 25.0% |
| !! | ATCAGTAGATTAGTTGAAAA+TGG | - | chr3_4:64814267-64814286 | Msa0514130:CDS | 25.0% |
| ! | ATTAGTTGAAAATGGTCATT+TGG | - | chr3_4:64814275-64814294 | Msa0514130:CDS | 25.0% |
| !! | AACATCTTCTAAGTATCTTT+TGG | + | chr3_4:64814622-64814641 | None:intergenic | 25.0% |
| !! | AAGATACTTAGAAGATGTTT+TGG | - | chr3_4:64814623-64814642 | Msa0514130:intron | 25.0% |
| ! | GCATTCTTATACTTATATAC+TGG | - | chr3_4:64815077-64815096 | Msa0514130:intron | 25.0% |
| ! | TTCTTATACTTATATACTGG+CGG | - | chr3_4:64815080-64815099 | Msa0514130:intron | 25.0% |
| !!! | TTTATGTTAATTGACTTGCT+TGG | - | chr3_4:64815479-64815498 | Msa0514130:intron | 25.0% |
| TGAGAAGATTCAGCAAATTA+GGG | + | chr3_4:64813388-64813407 | None:intergenic | 30.0% | |
| ACAGATCAAAACCACAAATT+AGG | + | chr3_4:64813576-64813595 | None:intergenic | 30.0% | |
| GTAGAGATAGATCATGATAT+AGG | - | chr3_4:64813678-64813697 | Msa0514130:CDS | 30.0% | |
| TAGCTGATCTAGTGAATTTA+CGG | - | chr3_4:64813752-64813771 | Msa0514130:intron | 30.0% | |
| AAACATAAGCCAATCCAAAA+GGG | + | chr3_4:64813779-64813798 | None:intergenic | 30.0% | |
| AAGTCATAAGTTCTCACTAA+CGG | + | chr3_4:64813890-64813909 | None:intergenic | 30.0% | |
| CAATTTCTCTATAGGACATA+GGG | + | chr3_4:64813981-64814000 | None:intergenic | 30.0% | |
| TAAGCACTAATGAGAATCTT+TGG | + | chr3_4:64814246-64814265 | None:intergenic | 30.0% | |
| CTAAGAACAAAAACAACAAC+AGG | + | chr3_4:64814507-64814526 | None:intergenic | 30.0% | |
| !!! | TTCTAAGTATCTTTTGGCTT+TGG | + | chr3_4:64814616-64814635 | None:intergenic | 30.0% |
| TTGTTTGATTGTTCACTTCT+AGG | - | chr3_4:64814904-64814923 | Msa0514130:intron | 30.0% | |
| TATTCTTATTCGTGTTTGGA+TGG | - | chr3_4:64815040-64815059 | Msa0514130:intron | 30.0% | |
| AGTGGAGATGAAAATTCAAA+AGG | + | chr3_4:64815216-64815235 | None:intergenic | 30.0% | |
| ! | ATTTTCATCTCCACTCTAAA+AGG | - | chr3_4:64815221-64815240 | Msa0514130:intron | 30.0% |
| !! | TTTTCATCTCCACTCTAAAA+GGG | - | chr3_4:64815222-64815241 | Msa0514130:intron | 30.0% |
| AAATAAAGGGTCTCAACTAT+TGG | + | chr3_4:64815362-64815381 | None:intergenic | 30.0% | |
| !! | GACTTGCTTGGAAAATTTTA+TGG | - | chr3_4:64815491-64815510 | Msa0514130:CDS | 30.0% |
| ! | TTGCTTGGAAAATTTTATGG+TGG | - | chr3_4:64815494-64815513 | Msa0514130:CDS | 30.0% |
| !!! | GATTCAAGTTTTGTTTACCA+TGG | - | chr3_4:64815530-64815549 | Msa0514130:five_prime_UTR | 30.0% |
| !!! | AACTCAAAGGTATTTTAACG+AGG | + | chr3_4:64815556-64815575 | None:intergenic | 30.0% |
| TGAGAAGATTCAGCAAATTA+GGG | + | chr3_4:64813388-64813407 | None:intergenic | 30.0% | |
| ACAGATCAAAACCACAAATT+AGG | + | chr3_4:64813576-64813595 | None:intergenic | 30.0% | |
| GTAGAGATAGATCATGATAT+AGG | - | chr3_4:64813678-64813697 | Msa0514130:CDS | 30.0% | |
| TAGCTGATCTAGTGAATTTA+CGG | - | chr3_4:64813752-64813771 | Msa0514130:intron | 30.0% | |
| AAACATAAGCCAATCCAAAA+GGG | + | chr3_4:64813779-64813798 | None:intergenic | 30.0% | |
| AAGTCATAAGTTCTCACTAA+CGG | + | chr3_4:64813890-64813909 | None:intergenic | 30.0% | |
| CAATTTCTCTATAGGACATA+GGG | + | chr3_4:64813981-64814000 | None:intergenic | 30.0% | |
| TAAGCACTAATGAGAATCTT+TGG | + | chr3_4:64814246-64814265 | None:intergenic | 30.0% | |
| CTAAGAACAAAAACAACAAC+AGG | + | chr3_4:64814507-64814526 | None:intergenic | 30.0% | |
| !!! | TTCTAAGTATCTTTTGGCTT+TGG | + | chr3_4:64814616-64814635 | None:intergenic | 30.0% |
| TTGTTTGATTGTTCACTTCT+AGG | - | chr3_4:64814904-64814923 | Msa0514130:intron | 30.0% | |
| TATTCTTATTCGTGTTTGGA+TGG | - | chr3_4:64815040-64815059 | Msa0514130:intron | 30.0% | |
| AGTGGAGATGAAAATTCAAA+AGG | + | chr3_4:64815216-64815235 | None:intergenic | 30.0% | |
| ! | ATTTTCATCTCCACTCTAAA+AGG | - | chr3_4:64815221-64815240 | Msa0514130:intron | 30.0% |
| !! | TTTTCATCTCCACTCTAAAA+GGG | - | chr3_4:64815222-64815241 | Msa0514130:intron | 30.0% |
| AAATAAAGGGTCTCAACTAT+TGG | + | chr3_4:64815362-64815381 | None:intergenic | 30.0% | |
| !! | GACTTGCTTGGAAAATTTTA+TGG | - | chr3_4:64815491-64815510 | Msa0514130:CDS | 30.0% |
| ! | TTGCTTGGAAAATTTTATGG+TGG | - | chr3_4:64815494-64815513 | Msa0514130:CDS | 30.0% |
| !!! | GATTCAAGTTTTGTTTACCA+TGG | - | chr3_4:64815530-64815549 | Msa0514130:five_prime_UTR | 30.0% |
| !!! | AACTCAAAGGTATTTTAACG+AGG | + | chr3_4:64815556-64815575 | None:intergenic | 30.0% |
| CTGAGAAGATTCAGCAAATT+AGG | + | chr3_4:64813389-64813408 | None:intergenic | 35.0% | |
| ! | ATTACATTTGGTGGGATTGT+CGG | + | chr3_4:64813483-64813502 | None:intergenic | 35.0% |
| AGAGAGGAATTACATTTGGT+GGG | + | chr3_4:64813491-64813510 | None:intergenic | 35.0% | |
| ATCGAGAGAGGAATTACATT+TGG | + | chr3_4:64813495-64813514 | None:intergenic | 35.0% | |
| ATGAAAGAAGAAATCGAGAG+AGG | + | chr3_4:64813507-64813526 | None:intergenic | 35.0% | |
| TTACCTTGAAATGAACCCTA+AGG | + | chr3_4:64813629-64813648 | None:intergenic | 35.0% | |
| AGCTGATCTAGTGAATTTAC+GGG | - | chr3_4:64813753-64813772 | Msa0514130:intron | 35.0% | |
| CAAACATAAGCCAATCCAAA+AGG | + | chr3_4:64813780-64813799 | None:intergenic | 35.0% | |
| TATAGGACATAGGGTTCATT+TGG | + | chr3_4:64813972-64813991 | None:intergenic | 35.0% | |
| GCAATTTCTCTATAGGACAT+AGG | + | chr3_4:64813982-64814001 | None:intergenic | 35.0% | |
| ! | TTATAACCTGCCTTACCTTT+TGG | - | chr3_4:64814026-64814045 | Msa0514130:CDS | 35.0% |
| ! | TTTTATCCAAAAGGTAAGGC+AGG | + | chr3_4:64814035-64814054 | None:intergenic | 35.0% |
| ! | AACTATCCTTTGAGAGCATA+GGG | - | chr3_4:64814169-64814188 | Msa0514130:intron | 35.0% |
| TTATTTCCCTATGCTCTCAA+AGG | + | chr3_4:64814178-64814197 | None:intergenic | 35.0% | |
| ! | GAGAATCTTTGGAAGACATA+TGG | + | chr3_4:64814235-64814254 | None:intergenic | 35.0% |
| ATACATATGAAGGGCAAGTT+TGG | + | chr3_4:64814306-64814325 | None:intergenic | 35.0% | |
| !! | TCAAATTTGGTGGACTAGTT+TGG | - | chr3_4:64814461-64814480 | Msa0514130:intron | 35.0% |
| CTAAGAACAGACACTCTAAT+GGG | - | chr3_4:64814706-64814725 | Msa0514130:intron | 35.0% | |
| !! | ATGAATTTAGCTGACTTGAC+AGG | + | chr3_4:64814744-64814763 | None:intergenic | 35.0% |
| ATTGTTCACTTCTAGGTGAA+AGG | - | chr3_4:64814911-64814930 | Msa0514130:intron | 35.0% | |
| GCACTATTCTTATTCGTGTT+TGG | - | chr3_4:64815036-64815055 | Msa0514130:intron | 35.0% | |
| !! | GATACAATACCCTTTTAGAG+TGG | + | chr3_4:64815234-64815253 | None:intergenic | 35.0% |
| CTGAGAAGATTCAGCAAATT+AGG | + | chr3_4:64813389-64813408 | None:intergenic | 35.0% | |
| ! | ATTACATTTGGTGGGATTGT+CGG | + | chr3_4:64813483-64813502 | None:intergenic | 35.0% |
| AGAGAGGAATTACATTTGGT+GGG | + | chr3_4:64813491-64813510 | None:intergenic | 35.0% | |
| ATCGAGAGAGGAATTACATT+TGG | + | chr3_4:64813495-64813514 | None:intergenic | 35.0% | |
| ATGAAAGAAGAAATCGAGAG+AGG | + | chr3_4:64813507-64813526 | None:intergenic | 35.0% | |
| TTACCTTGAAATGAACCCTA+AGG | + | chr3_4:64813629-64813648 | None:intergenic | 35.0% | |
| AGCTGATCTAGTGAATTTAC+GGG | - | chr3_4:64813753-64813772 | Msa0514130:intron | 35.0% | |
| CAAACATAAGCCAATCCAAA+AGG | + | chr3_4:64813780-64813799 | None:intergenic | 35.0% | |
| TATAGGACATAGGGTTCATT+TGG | + | chr3_4:64813972-64813991 | None:intergenic | 35.0% | |
| GCAATTTCTCTATAGGACAT+AGG | + | chr3_4:64813982-64814001 | None:intergenic | 35.0% | |
| ! | TTATAACCTGCCTTACCTTT+TGG | - | chr3_4:64814026-64814045 | Msa0514130:CDS | 35.0% |
| ! | TTTTATCCAAAAGGTAAGGC+AGG | + | chr3_4:64814035-64814054 | None:intergenic | 35.0% |
| ! | AACTATCCTTTGAGAGCATA+GGG | - | chr3_4:64814169-64814188 | Msa0514130:intron | 35.0% |
| TTATTTCCCTATGCTCTCAA+AGG | + | chr3_4:64814178-64814197 | None:intergenic | 35.0% | |
| ! | GAGAATCTTTGGAAGACATA+TGG | + | chr3_4:64814235-64814254 | None:intergenic | 35.0% |
| ATACATATGAAGGGCAAGTT+TGG | + | chr3_4:64814306-64814325 | None:intergenic | 35.0% | |
| !! | TCAAATTTGGTGGACTAGTT+TGG | - | chr3_4:64814461-64814480 | Msa0514130:intron | 35.0% |
| CTAAGAACAGACACTCTAAT+GGG | - | chr3_4:64814706-64814725 | Msa0514130:intron | 35.0% | |
| !! | ATGAATTTAGCTGACTTGAC+AGG | + | chr3_4:64814744-64814763 | None:intergenic | 35.0% |
| ATTGTTCACTTCTAGGTGAA+AGG | - | chr3_4:64814911-64814930 | Msa0514130:intron | 35.0% | |
| GCACTATTCTTATTCGTGTT+TGG | - | chr3_4:64815036-64815055 | Msa0514130:intron | 35.0% | |
| !! | GATACAATACCCTTTTAGAG+TGG | + | chr3_4:64815234-64815253 | None:intergenic | 35.0% |
| ! | TTACATTTGGTGGGATTGTC+GGG | + | chr3_4:64813482-64813501 | None:intergenic | 40.0% |
| GAGAGAGGAATTACATTTGG+TGG | + | chr3_4:64813492-64813511 | None:intergenic | 40.0% | |
| ATCTGTAATTGCAGCAACCA+AGG | - | chr3_4:64813590-64813609 | Msa0514130:three_prime_UTR | 40.0% | |
| TGACCTTAGGGTTCATTTCA+AGG | - | chr3_4:64813623-64813642 | Msa0514130:exon | 40.0% | |
| ! | GAACTATCCTTTGAGAGCAT+AGG | - | chr3_4:64814168-64814187 | Msa0514130:intron | 40.0% |
| ! | GGCAAATCAAGTGGGTTTAA+AGG | + | chr3_4:64814373-64814392 | None:intergenic | 40.0% |
| ACCATCATGGCAAATCAAGT+GGG | + | chr3_4:64814381-64814400 | None:intergenic | 40.0% | |
| !! | TTTCCCCTTGGTGTCAAATT+TGG | - | chr3_4:64814448-64814467 | Msa0514130:intron | 40.0% |
| TCCACCAAATTTGACACCAA+GGG | + | chr3_4:64814455-64814474 | None:intergenic | 40.0% | |
| ! | ATTTTACTGTGCAGAACACC+AGG | - | chr3_4:64814556-64814575 | Msa0514130:intron | 40.0% |
| ! | TTTTACTGTGCAGAACACCA+GGG | - | chr3_4:64814557-64814576 | Msa0514130:intron | 40.0% |
| !!! | TATCTTTTGGCTTTGGTCAG+GGG | + | chr3_4:64814609-64814628 | None:intergenic | 40.0% |
| !!! | GTATCTTTTGGCTTTGGTCA+GGG | + | chr3_4:64814610-64814629 | None:intergenic | 40.0% |
| !!! | AGTATCTTTTGGCTTTGGTC+AGG | + | chr3_4:64814611-64814630 | None:intergenic | 40.0% |
| ACAGAAACGTCTGAAAGGAA+TGG | + | chr3_4:64814661-64814680 | None:intergenic | 40.0% | |
| ! | AGAGTGTCTGTTCTTAGCTT+GGG | + | chr3_4:64814703-64814722 | None:intergenic | 40.0% |
| ! | TAGAGTGTCTGTTCTTAGCT+TGG | + | chr3_4:64814704-64814723 | None:intergenic | 40.0% |
| GCTAAGAACAGACACTCTAA+TGG | - | chr3_4:64814705-64814724 | Msa0514130:intron | 40.0% | |
| TGCAGTTTGATGCGTTTAAC+TGG | - | chr3_4:64814861-64814880 | Msa0514130:intron | 40.0% | |
| TCACTTCTAGGTGAAAGGTT+TGG | - | chr3_4:64814916-64814935 | Msa0514130:intron | 40.0% | |
| !! | GTTTTTGAGCTTGATTGACC+TGG | + | chr3_4:64814970-64814989 | None:intergenic | 40.0% |
| AACAAAGAAGACGTACCTAC+AGG | - | chr3_4:64814987-64815006 | Msa0514130:intron | 40.0% | |
| ACAAAGAAGACGTACCTACA+GGG | - | chr3_4:64814988-64815007 | Msa0514130:intron | 40.0% | |
| CAGATAGTATCAGTTCGATG+TGG | + | chr3_4:64815148-64815167 | None:intergenic | 40.0% | |
| CGAACTGATACTATCTGAGA+AGG | - | chr3_4:64815151-64815170 | Msa0514130:intron | 40.0% | |
| GATACTATCTGAGAAGGAAG+AGG | - | chr3_4:64815157-64815176 | Msa0514130:intron | 40.0% | |
| AACAACGCAATACCTCTTTC+TGG | + | chr3_4:64815187-64815206 | None:intergenic | 40.0% | |
| ! | CTTCTTGTTTGTTGCCAACT+GGG | + | chr3_4:64815290-64815309 | None:intergenic | 40.0% |
| ! | TCTTCTTGTTTGTTGCCAAC+TGG | + | chr3_4:64815291-64815310 | None:intergenic | 40.0% |
| !!! | AAGGTATTTTAACGAGGCCA+TGG | + | chr3_4:64815550-64815569 | None:intergenic | 40.0% |
| AAAGGACGTGCAAAACTCAA+AGG | + | chr3_4:64815569-64815588 | None:intergenic | 40.0% | |
| ! | TTACATTTGGTGGGATTGTC+GGG | + | chr3_4:64813482-64813501 | None:intergenic | 40.0% |
| GAGAGAGGAATTACATTTGG+TGG | + | chr3_4:64813492-64813511 | None:intergenic | 40.0% | |
| ATCTGTAATTGCAGCAACCA+AGG | - | chr3_4:64813590-64813609 | Msa0514130:three_prime_UTR | 40.0% | |
| TGACCTTAGGGTTCATTTCA+AGG | - | chr3_4:64813623-64813642 | Msa0514130:exon | 40.0% | |
| ! | GAACTATCCTTTGAGAGCAT+AGG | - | chr3_4:64814168-64814187 | Msa0514130:intron | 40.0% |
| ! | GGCAAATCAAGTGGGTTTAA+AGG | + | chr3_4:64814373-64814392 | None:intergenic | 40.0% |
| ACCATCATGGCAAATCAAGT+GGG | + | chr3_4:64814381-64814400 | None:intergenic | 40.0% | |
| !! | TTTCCCCTTGGTGTCAAATT+TGG | - | chr3_4:64814448-64814467 | Msa0514130:intron | 40.0% |
| TCCACCAAATTTGACACCAA+GGG | + | chr3_4:64814455-64814474 | None:intergenic | 40.0% | |
| ! | ATTTTACTGTGCAGAACACC+AGG | - | chr3_4:64814556-64814575 | Msa0514130:intron | 40.0% |
| ! | TTTTACTGTGCAGAACACCA+GGG | - | chr3_4:64814557-64814576 | Msa0514130:intron | 40.0% |
| !!! | TATCTTTTGGCTTTGGTCAG+GGG | + | chr3_4:64814609-64814628 | None:intergenic | 40.0% |
| !!! | GTATCTTTTGGCTTTGGTCA+GGG | + | chr3_4:64814610-64814629 | None:intergenic | 40.0% |
| !!! | AGTATCTTTTGGCTTTGGTC+AGG | + | chr3_4:64814611-64814630 | None:intergenic | 40.0% |
| ACAGAAACGTCTGAAAGGAA+TGG | + | chr3_4:64814661-64814680 | None:intergenic | 40.0% | |
| ! | AGAGTGTCTGTTCTTAGCTT+GGG | + | chr3_4:64814703-64814722 | None:intergenic | 40.0% |
| ! | TAGAGTGTCTGTTCTTAGCT+TGG | + | chr3_4:64814704-64814723 | None:intergenic | 40.0% |
| GCTAAGAACAGACACTCTAA+TGG | - | chr3_4:64814705-64814724 | Msa0514130:intron | 40.0% | |
| TGCAGTTTGATGCGTTTAAC+TGG | - | chr3_4:64814861-64814880 | Msa0514130:intron | 40.0% | |
| TCACTTCTAGGTGAAAGGTT+TGG | - | chr3_4:64814916-64814935 | Msa0514130:intron | 40.0% | |
| !! | GTTTTTGAGCTTGATTGACC+TGG | + | chr3_4:64814970-64814989 | None:intergenic | 40.0% |
| AACAAAGAAGACGTACCTAC+AGG | - | chr3_4:64814987-64815006 | Msa0514130:intron | 40.0% | |
| ACAAAGAAGACGTACCTACA+GGG | - | chr3_4:64814988-64815007 | Msa0514130:intron | 40.0% | |
| CAGATAGTATCAGTTCGATG+TGG | + | chr3_4:64815148-64815167 | None:intergenic | 40.0% | |
| CGAACTGATACTATCTGAGA+AGG | - | chr3_4:64815151-64815170 | Msa0514130:intron | 40.0% | |
| GATACTATCTGAGAAGGAAG+AGG | - | chr3_4:64815157-64815176 | Msa0514130:intron | 40.0% | |
| AACAACGCAATACCTCTTTC+TGG | + | chr3_4:64815187-64815206 | None:intergenic | 40.0% | |
| ! | CTTCTTGTTTGTTGCCAACT+GGG | + | chr3_4:64815290-64815309 | None:intergenic | 40.0% |
| ! | TCTTCTTGTTTGTTGCCAAC+TGG | + | chr3_4:64815291-64815310 | None:intergenic | 40.0% |
| !!! | AAGGTATTTTAACGAGGCCA+TGG | + | chr3_4:64815550-64815569 | None:intergenic | 40.0% |
| AAAGGACGTGCAAAACTCAA+AGG | + | chr3_4:64815569-64815588 | None:intergenic | 40.0% | |
| TGCTCTACTAATTCGTCAGG+GGG | + | chr3_4:64813435-64813454 | None:intergenic | 45.0% | |
| CTGCTCTACTAATTCGTCAG+GGG | + | chr3_4:64813436-64813455 | None:intergenic | 45.0% | |
| GCTGCTCTACTAATTCGTCA+GGG | + | chr3_4:64813437-64813456 | None:intergenic | 45.0% | |
| ACGAATTAGTAGAGCAGCCA+TGG | - | chr3_4:64813439-64813458 | Msa0514130:three_prime_UTR | 45.0% | |
| !! | CTCTTTGGAGTACTTCACCA+TGG | + | chr3_4:64813459-64813478 | None:intergenic | 45.0% |
| GATCAGCTATTCTGACAGCT+CGG | + | chr3_4:64813741-64813760 | None:intergenic | 45.0% | |
| ! | AGTGAATTTACGGGCCCTTT+TGG | - | chr3_4:64813762-64813781 | Msa0514130:intron | 45.0% |
| ! | ATTTACGGGCCCTTTTGGAT+TGG | - | chr3_4:64813767-64813786 | Msa0514130:intron | 45.0% |
| !! | ACCCACTTGATTTGCCATGA+TGG | - | chr3_4:64814377-64814396 | Msa0514130:CDS | 45.0% |
| CACCATCATGGCAAATCAAG+TGG | + | chr3_4:64814382-64814401 | None:intergenic | 45.0% | |
| !! | TTGCCATGATGGTGTTGACT+TGG | - | chr3_4:64814388-64814407 | Msa0514130:CDS | 45.0% |
| !! | TGCCATGATGGTGTTGACTT+GGG | - | chr3_4:64814389-64814408 | Msa0514130:CDS | 45.0% |
| AACTAACCTGAGACCTTTGG+AGG | + | chr3_4:64814430-64814449 | None:intergenic | 45.0% | |
| GGAAACTAACCTGAGACCTT+TGG | + | chr3_4:64814433-64814452 | None:intergenic | 45.0% | |
| CCACCAAATTTGACACCAAG+GGG | + | chr3_4:64814454-64814473 | None:intergenic | 45.0% | |
| GTCCACCAAATTTGACACCA+AGG | + | chr3_4:64814456-64814475 | None:intergenic | 45.0% | |
| !!! | AGATGTTTTGGCCCACAAAC+AGG | - | chr3_4:64814635-64814654 | Msa0514130:intron | 45.0% |
| GAAAGGAATGGCCTGTTTGT+GGG | + | chr3_4:64814649-64814668 | None:intergenic | 45.0% | |
| TGAAAGGAATGGCCTGTTTG+TGG | + | chr3_4:64814650-64814669 | None:intergenic | 45.0% | |
| ! | AACAGACACTCTAATGGGCA+AGG | - | chr3_4:64814711-64814730 | Msa0514130:intron | 45.0% |
| CTAGGTGAAAGGTTTGGATG+TGG | - | chr3_4:64814922-64814941 | Msa0514130:intron | 45.0% | |
| TCTCTACGTGTCTCATATCC+AGG | - | chr3_4:64814949-64814968 | Msa0514130:intron | 45.0% | |
| AGTATCAGTTCGATGTGGCA+AGG | + | chr3_4:64815143-64815162 | None:intergenic | 45.0% | |
| AAGTCTCAAGCTGTTCGAAG+TGG | - | chr3_4:64815310-64815329 | Msa0514130:intron | 45.0% | |
| TGCTCTACTAATTCGTCAGG+GGG | + | chr3_4:64813435-64813454 | None:intergenic | 45.0% | |
| CTGCTCTACTAATTCGTCAG+GGG | + | chr3_4:64813436-64813455 | None:intergenic | 45.0% | |
| GCTGCTCTACTAATTCGTCA+GGG | + | chr3_4:64813437-64813456 | None:intergenic | 45.0% | |
| ACGAATTAGTAGAGCAGCCA+TGG | - | chr3_4:64813439-64813458 | Msa0514130:three_prime_UTR | 45.0% | |
| !! | CTCTTTGGAGTACTTCACCA+TGG | + | chr3_4:64813459-64813478 | None:intergenic | 45.0% |
| GATCAGCTATTCTGACAGCT+CGG | + | chr3_4:64813741-64813760 | None:intergenic | 45.0% | |
| ! | AGTGAATTTACGGGCCCTTT+TGG | - | chr3_4:64813762-64813781 | Msa0514130:intron | 45.0% |
| ! | ATTTACGGGCCCTTTTGGAT+TGG | - | chr3_4:64813767-64813786 | Msa0514130:intron | 45.0% |
| !! | ACCCACTTGATTTGCCATGA+TGG | - | chr3_4:64814377-64814396 | Msa0514130:CDS | 45.0% |
| CACCATCATGGCAAATCAAG+TGG | + | chr3_4:64814382-64814401 | None:intergenic | 45.0% | |
| !! | TTGCCATGATGGTGTTGACT+TGG | - | chr3_4:64814388-64814407 | Msa0514130:CDS | 45.0% |
| !! | TGCCATGATGGTGTTGACTT+GGG | - | chr3_4:64814389-64814408 | Msa0514130:CDS | 45.0% |
| AACTAACCTGAGACCTTTGG+AGG | + | chr3_4:64814430-64814449 | None:intergenic | 45.0% | |
| GGAAACTAACCTGAGACCTT+TGG | + | chr3_4:64814433-64814452 | None:intergenic | 45.0% | |
| CCACCAAATTTGACACCAAG+GGG | + | chr3_4:64814454-64814473 | None:intergenic | 45.0% | |
| GTCCACCAAATTTGACACCA+AGG | + | chr3_4:64814456-64814475 | None:intergenic | 45.0% | |
| !!! | AGATGTTTTGGCCCACAAAC+AGG | - | chr3_4:64814635-64814654 | Msa0514130:intron | 45.0% |
| GAAAGGAATGGCCTGTTTGT+GGG | + | chr3_4:64814649-64814668 | None:intergenic | 45.0% | |
| TGAAAGGAATGGCCTGTTTG+TGG | + | chr3_4:64814650-64814669 | None:intergenic | 45.0% | |
| ! | AACAGACACTCTAATGGGCA+AGG | - | chr3_4:64814711-64814730 | Msa0514130:intron | 45.0% |
| CTAGGTGAAAGGTTTGGATG+TGG | - | chr3_4:64814922-64814941 | Msa0514130:intron | 45.0% | |
| TCTCTACGTGTCTCATATCC+AGG | - | chr3_4:64814949-64814968 | Msa0514130:intron | 45.0% | |
| AGTATCAGTTCGATGTGGCA+AGG | + | chr3_4:64815143-64815162 | None:intergenic | 45.0% | |
| AAGTCTCAAGCTGTTCGAAG+TGG | - | chr3_4:64815310-64815329 | Msa0514130:intron | 45.0% | |
| TGAACTCGATTGTGGGAAGG+AGG | + | chr3_4:64813412-64813431 | None:intergenic | 50.0% | |
| GGCTGCTCTACTAATTCGTC+AGG | + | chr3_4:64813438-64813457 | None:intergenic | 50.0% | |
| !! | GCCATGATGGTGTTGACTTG+GGG | - | chr3_4:64814390-64814409 | Msa0514130:CDS | 50.0% |
| !! | GTCTCAGGTTAGTTTCCCCT+TGG | - | chr3_4:64814436-64814455 | Msa0514130:intron | 50.0% |
| !! | CCCCTTGGTGTCAAATTTGG+TGG | - | chr3_4:64814451-64814470 | Msa0514130:intron | 50.0% |
| CCACGACAGAAACGTCTGAA+AGG | + | chr3_4:64814666-64814685 | None:intergenic | 50.0% | |
| CCTTTCAGACGTTTCTGTCG+TGG | - | chr3_4:64814663-64814682 | Msa0514130:intron | 50.0% | |
| AGACGTTTCTGTCGTGGTGT+TGG | - | chr3_4:64814669-64814688 | Msa0514130:intron | 50.0% | |
| GACGTTTCTGTCGTGGTGTT+GGG | - | chr3_4:64814670-64814689 | Msa0514130:intron | 50.0% | |
| GATTCTTCCATGAGCCCTGT+AGG | + | chr3_4:64815005-64815024 | None:intergenic | 50.0% | |
| GTGGCAAGGAGATGACATGT+AGG | + | chr3_4:64815129-64815148 | None:intergenic | 50.0% | |
| TTTGTTGCCAACTGGGTCTC+GGG | + | chr3_4:64815283-64815302 | None:intergenic | 50.0% | |
| ! | GTTTGTTGCCAACTGGGTCT+CGG | + | chr3_4:64815284-64815303 | None:intergenic | 50.0% |
| TGAACTCGATTGTGGGAAGG+AGG | + | chr3_4:64813412-64813431 | None:intergenic | 50.0% | |
| GGCTGCTCTACTAATTCGTC+AGG | + | chr3_4:64813438-64813457 | None:intergenic | 50.0% | |
| !! | GCCATGATGGTGTTGACTTG+GGG | - | chr3_4:64814390-64814409 | Msa0514130:CDS | 50.0% |
| !! | GTCTCAGGTTAGTTTCCCCT+TGG | - | chr3_4:64814436-64814455 | Msa0514130:intron | 50.0% |
| !! | CCCCTTGGTGTCAAATTTGG+TGG | - | chr3_4:64814451-64814470 | Msa0514130:intron | 50.0% |
| CCACGACAGAAACGTCTGAA+AGG | + | chr3_4:64814666-64814685 | None:intergenic | 50.0% | |
| CCTTTCAGACGTTTCTGTCG+TGG | - | chr3_4:64814663-64814682 | Msa0514130:intron | 50.0% | |
| AGACGTTTCTGTCGTGGTGT+TGG | - | chr3_4:64814669-64814688 | Msa0514130:intron | 50.0% | |
| GACGTTTCTGTCGTGGTGTT+GGG | - | chr3_4:64814670-64814689 | Msa0514130:intron | 50.0% | |
| GATTCTTCCATGAGCCCTGT+AGG | + | chr3_4:64815005-64815024 | None:intergenic | 50.0% | |
| GTGGCAAGGAGATGACATGT+AGG | + | chr3_4:64815129-64815148 | None:intergenic | 50.0% | |
| TTTGTTGCCAACTGGGTCTC+GGG | + | chr3_4:64815283-64815302 | None:intergenic | 50.0% | |
| ! | GTTTGTTGCCAACTGGGTCT+CGG | + | chr3_4:64815284-64815303 | None:intergenic | 50.0% |
| GGGTGAACTCGATTGTGGGA+AGG | + | chr3_4:64813415-64813434 | None:intergenic | 55.0% | |
| CAGGGGGTGAACTCGATTGT+GGG | + | chr3_4:64813419-64813438 | None:intergenic | 55.0% | |
| TCAGGGGGTGAACTCGATTG+TGG | + | chr3_4:64813420-64813439 | None:intergenic | 55.0% | |
| ATTGCAGCAACCAAGGCCAG+AGG | - | chr3_4:64813597-64813616 | Msa0514130:three_prime_UTR | 55.0% | |
| AACCCTAAGGTCAGCACCTC+TGG | + | chr3_4:64813616-64813635 | None:intergenic | 55.0% | |
| GCCCCAAGTCAACACCATCA+TGG | + | chr3_4:64814394-64814413 | None:intergenic | 55.0% | |
| !! | ATGGTGTTGACTTGGGGCCT+TGG | - | chr3_4:64814396-64814415 | Msa0514130:intron | 55.0% |
| !! | CTTTGGAGGAGCACTCTCCA+AGG | + | chr3_4:64814416-64814435 | None:intergenic | 55.0% |
| !! | CTTGGAGAGTGCTCCTCCAA+AGG | - | chr3_4:64814414-64814433 | Msa0514130:intron | 55.0% |
| AGTGCTCCTCCAAAGGTCTC+AGG | - | chr3_4:64814421-64814440 | Msa0514130:intron | 55.0% | |
| ! | GATGGCAAACGCTGTTTCCC+TGG | + | chr3_4:64814577-64814596 | None:intergenic | 55.0% |
| GGGAAACAGCGTTTGCCATC+AGG | - | chr3_4:64814577-64814596 | Msa0514130:intron | 55.0% | |
| ! | GTTTCTGTCGTGGTGTTGGG+AGG | - | chr3_4:64814673-64814692 | Msa0514130:intron | 55.0% |
| ! | ACTCTAATGGGCAAGGACGC+TGG | - | chr3_4:64814718-64814737 | Msa0514130:intron | 55.0% |
| AGACGTACCTACAGGGCTCA+TGG | - | chr3_4:64814995-64815014 | Msa0514130:intron | 55.0% | |
| GGAAGAGGCTGTCCAGAAAG+AGG | - | chr3_4:64815172-64815191 | Msa0514130:intron | 55.0% | |
| GGGTGAACTCGATTGTGGGA+AGG | + | chr3_4:64813415-64813434 | None:intergenic | 55.0% | |
| CAGGGGGTGAACTCGATTGT+GGG | + | chr3_4:64813419-64813438 | None:intergenic | 55.0% | |
| TCAGGGGGTGAACTCGATTG+TGG | + | chr3_4:64813420-64813439 | None:intergenic | 55.0% | |
| ATTGCAGCAACCAAGGCCAG+AGG | - | chr3_4:64813597-64813616 | Msa0514130:three_prime_UTR | 55.0% | |
| AACCCTAAGGTCAGCACCTC+TGG | + | chr3_4:64813616-64813635 | None:intergenic | 55.0% | |
| GCCCCAAGTCAACACCATCA+TGG | + | chr3_4:64814394-64814413 | None:intergenic | 55.0% | |
| !! | ATGGTGTTGACTTGGGGCCT+TGG | - | chr3_4:64814396-64814415 | Msa0514130:intron | 55.0% |
| !! | CTTTGGAGGAGCACTCTCCA+AGG | + | chr3_4:64814416-64814435 | None:intergenic | 55.0% |
| !! | CTTGGAGAGTGCTCCTCCAA+AGG | - | chr3_4:64814414-64814433 | Msa0514130:intron | 55.0% |
| AGTGCTCCTCCAAAGGTCTC+AGG | - | chr3_4:64814421-64814440 | Msa0514130:intron | 55.0% | |
| ! | GATGGCAAACGCTGTTTCCC+TGG | + | chr3_4:64814577-64814596 | None:intergenic | 55.0% |
| GGGAAACAGCGTTTGCCATC+AGG | - | chr3_4:64814577-64814596 | Msa0514130:intron | 55.0% | |
| ! | GTTTCTGTCGTGGTGTTGGG+AGG | - | chr3_4:64814673-64814692 | Msa0514130:intron | 55.0% |
| ! | ACTCTAATGGGCAAGGACGC+TGG | - | chr3_4:64814718-64814737 | Msa0514130:intron | 55.0% |
| AGACGTACCTACAGGGCTCA+TGG | - | chr3_4:64814995-64815014 | Msa0514130:intron | 55.0% | |
| GGAAGAGGCTGTCCAGAAAG+AGG | - | chr3_4:64815172-64815191 | Msa0514130:intron | 55.0% | |
| GGTGGGATTGTCGGGCTCTT+TGG | + | chr3_4:64813474-64813493 | None:intergenic | 60.0% | |
| AAGGTCAGCACCTCTGGCCT+TGG | + | chr3_4:64813610-64813629 | None:intergenic | 60.0% | |
| !! | AGGCCAGAGGTGCTGACCTT+AGG | - | chr3_4:64813610-64813629 | Msa0514130:three_prime_UTR | 60.0% |
| !! | GGCCAGAGGTGCTGACCTTA+GGG | - | chr3_4:64813611-64813630 | Msa0514130:three_prime_UTR | 60.0% |
| GGTCAGGGGCAACTTCCTGA+TGG | + | chr3_4:64814595-64814614 | None:intergenic | 60.0% | |
| TCTGTAGCCCGAGACCCAGT+TGG | - | chr3_4:64815273-64815292 | Msa0514130:intron | 60.0% | |
| GGTGGGATTGTCGGGCTCTT+TGG | + | chr3_4:64813474-64813493 | None:intergenic | 60.0% | |
| AAGGTCAGCACCTCTGGCCT+TGG | + | chr3_4:64813610-64813629 | None:intergenic | 60.0% | |
| !! | AGGCCAGAGGTGCTGACCTT+AGG | - | chr3_4:64813610-64813629 | Msa0514130:three_prime_UTR | 60.0% |
| !! | GGCCAGAGGTGCTGACCTTA+GGG | - | chr3_4:64813611-64813630 | Msa0514130:three_prime_UTR | 60.0% |
| GGTCAGGGGCAACTTCCTGA+TGG | + | chr3_4:64814595-64814614 | None:intergenic | 60.0% | |
| TCTGTAGCCCGAGACCCAGT+TGG | - | chr3_4:64815273-64815292 | Msa0514130:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 64813380 | 64815604 | 64813380 | ID=Msa0514130;Name=Msa0514130 |
| chr3_4 | mRNA | 64813380 | 64815604 | 64813380 | ID=Msa0514130-mRNA-1;Parent=Msa0514130;Name=Msa0514130-mRNA-1;_AED=0.06;_eAED=0.06;_QI=78|1|1|1|1|1|6|259|182 |
| chr3_4 | exon | 64813380 | 64813704 | 64813380 | ID=Msa0514130-mRNA-1:exon:16381;Parent=Msa0514130-mRNA-1 |
| chr3_4 | exon | 64813791 | 64813858 | 64813791 | ID=Msa0514130-mRNA-1:exon:16380;Parent=Msa0514130-mRNA-1 |
| chr3_4 | exon | 64813956 | 64814058 | 64813956 | ID=Msa0514130-mRNA-1:exon:16379;Parent=Msa0514130-mRNA-1 |
| chr3_4 | exon | 64814184 | 64814414 | 64814184 | ID=Msa0514130-mRNA-1:exon:16378;Parent=Msa0514130-mRNA-1 |
| chr3_4 | exon | 64815340 | 64815380 | 64815340 | ID=Msa0514130-mRNA-1:exon:16377;Parent=Msa0514130-mRNA-1 |
| chr3_4 | exon | 64815487 | 64815604 | 64815487 | ID=Msa0514130-mRNA-1:exon:16376;Parent=Msa0514130-mRNA-1 |
| chr3_4 | five_prime_UTR | 64815527 | 64815604 | 64815527 | ID=Msa0514130-mRNA-1:five_prime_utr;Parent=Msa0514130-mRNA-1 |
| chr3_4 | CDS | 64815487 | 64815526 | 64815487 | ID=Msa0514130-mRNA-1:cds;Parent=Msa0514130-mRNA-1 |
| chr3_4 | CDS | 64815340 | 64815380 | 64815340 | ID=Msa0514130-mRNA-1:cds;Parent=Msa0514130-mRNA-1 |
| chr3_4 | CDS | 64814184 | 64814414 | 64814184 | ID=Msa0514130-mRNA-1:cds;Parent=Msa0514130-mRNA-1 |
| chr3_4 | CDS | 64813956 | 64814058 | 64813956 | ID=Msa0514130-mRNA-1:cds;Parent=Msa0514130-mRNA-1 |
| chr3_4 | CDS | 64813791 | 64813858 | 64813791 | ID=Msa0514130-mRNA-1:cds;Parent=Msa0514130-mRNA-1 |
| chr3_4 | CDS | 64813639 | 64813704 | 64813639 | ID=Msa0514130-mRNA-1:cds;Parent=Msa0514130-mRNA-1 |
| chr3_4 | three_prime_UTR | 64813380 | 64813638 | 64813380 | ID=Msa0514130-mRNA-1:three_prime_utr;Parent=Msa0514130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
