AlfalfaGEDB | Msa0003030

M. sativa cultivar zhongmu-4 / Msa0003030

KEGG: K02872
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0032991 GO:0034641 GO:0034645 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00572.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0003030	sp\|Q9FKC0\|R13A4_ARATH	85.922	206	29	0	1	206	1	206	1.88e-130	368

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003030	Msa0004760	0.805187	1.506553e-49	-8.615850e-47
Msa0003030	Msa0042510	0.849203	3.760210e-60	-8.615850e-47
Msa0003030	Msa0079560	0.854278	1.368880e-61	-8.615850e-47
Msa0003030	Msa0093440	-0.802577	5.251064e-49	-8.615850e-47
Msa0003030	Msa0094940	0.813920	2.004497e-51	-8.615850e-47
Msa0003030	Msa0127230	0.853817	1.859007e-61	-8.615850e-47
Msa0003030	Msa0146910	0.999394	3.015722e-308	-8.615850e-47
Msa0003030	Msa0172300	0.812432	4.253193e-51	-8.615850e-47
Msa0003030	Msa0226620	0.816775	4.646306e-52	-8.615850e-47
Msa0003030	Msa0304270	0.802770	4.791077e-49	-8.615850e-47
Msa0003030	Msa0334170	-0.803331	3.668242e-49	-8.615850e-47
Msa0003030	Msa0373350	0.874836	4.944251e-68	-8.615850e-47
Msa0003030	Msa0376850	0.857194	1.927092e-62	-8.615850e-47
Msa0003030	Msa0377610	0.856395	3.310990e-62	-8.615850e-47
Msa0003030	Msa0387290	0.832832	7.546505e-56	-8.615850e-47
Msa0003030	Msa0388520	0.831968	1.235281e-55	-8.615850e-47
Msa0003030	Msa0416470	0.817283	3.573408e-52	-8.615850e-47
Msa0003030	Msa0421920	0.871756	5.362925e-67	-8.615850e-47
Msa0003030	Msa0426820	0.830473	2.878889e-55	-8.615850e-47
Msa0003030	Msa0427380	0.809051	2.290225e-50	-8.615850e-47
Msa0003030	Msa0467740	0.889714	1.890606e-73	-8.615850e-47
Msa0003030	Msa0470230	0.827801	1.280157e-54	-8.615850e-47
Msa0003030	Msa0477670	0.816896	4.364933e-52	-8.615850e-47
Msa0003030	Msa0511760	0.816171	6.345393e-52	-8.615850e-47
Msa0003030	Msa0514130	0.892056	2.256416e-74	-8.615850e-47
Msa0003030	Msa0516830	0.857543	1.519692e-62	-8.615850e-47
Msa0003030	Msa0524340	0.802559	5.297710e-49	-8.615850e-47
Msa0003030	Msa0578010	0.820291	7.414184e-53	-8.615850e-47
Msa0003030	Msa0609120	0.801671	8.066907e-49	-8.615850e-47
Msa0003030	Msa0619230	0.827675	1.372544e-54	-8.615850e-47
Msa0003030	Msa0621170	0.840905	6.559155e-58	-8.615850e-47
Msa0003030	Msa0621190	0.879723	9.870849e-70	-8.615850e-47
Msa0003030	Msa0641020	-0.815241	1.022532e-51	-8.615850e-47
Msa0003030	Msa0641030	-0.821911	3.138350e-53	-8.615850e-47
Msa0003030	Msa0650910	0.802575	5.256685e-49	-8.615850e-47
Msa0003030	Msa0656450	0.859684	3.488596e-63	-8.615850e-47
Msa0003030	Msa0660870	-0.827881	1.224283e-54	-8.615850e-47
Msa0003030	Msa0663330	-0.802843	4.627532e-49	-8.615850e-47
Msa0003030	Msa0664020	-0.805897	1.069179e-49	-8.615850e-47
Msa0003030	Msa0679560	-0.806903	6.561853e-50	-8.615850e-47
Msa0003030	Msa0691760	0.850233	1.938561e-60	-8.615850e-47
Msa0003030	Msa0692850	0.807162	5.783314e-50	-8.615850e-47
Msa0003030	Msa0700370	0.861542	9.538811e-64	-8.615850e-47
Msa0003030	Msa0716750	-0.835839	1.327904e-56	-8.615850e-47
Msa0003030	Msa0757980	-0.819992	8.678002e-53	-8.615850e-47
Msa0003030	Msa0799280	-0.831095	2.026448e-55	-8.615850e-47
Msa0003030	Msa0837500	-0.815491	8.997730e-52	-8.615850e-47
Msa0003030	Msa0839230	-0.808840	2.541480e-50	-8.615850e-47
Msa0003030	Msa0883430	-0.802227	6.199626e-49	-8.615850e-47
Msa0003030	Msa0930360	0.835150	1.984267e-56	-8.615850e-47
Msa0003030	Msa0998890	0.862889	3.679721e-64	-8.615850e-47
Msa0003030	Msa1027870	0.805731	1.158516e-49	-8.615850e-47
Msa0003030	Msa1035900	0.804750	1.859343e-49	-8.615850e-47
Msa0003030	Msa1082050	0.814576	1.435706e-51	-8.615850e-47
Msa0003030	Msa1084850	0.800180	1.626773e-48	-8.615850e-47
Msa0003030	Msa1119260	0.803462	3.446704e-49	-8.615850e-47
Msa0003030	Msa1144630	0.815568	8.650293e-52	-8.615850e-47
Msa0003030	Msa1165700	0.860068	2.672191e-63	-8.615850e-47
Msa0003030	Msa1169470	0.809527	1.810468e-50	-8.615850e-47
Msa0003030	Msa1189540	0.839180	1.848706e-57	-8.615850e-47
Msa0003030	Msa1209560	-0.828736	7.618509e-55	-8.615850e-47
Msa0003030	Msa1225730	0.813570	2.393918e-51	-8.615850e-47
Msa0003030	Msa1227350	0.953311	3.628385e-111	-8.615850e-47
Msa0003030	Msa1246040	-0.806958	6.388420e-50	-8.615850e-47
Msa0003030	Msa1284800	0.827978	1.160247e-54	-8.615850e-47
Msa0003030	Msa1330530	-0.805046	1.612306e-49	-8.615850e-47
Msa0003030	Msa1363930	0.816065	6.700290e-52	-8.615850e-47
Msa0003030	Msa1366540	0.814122	1.809486e-51	-8.615850e-47
Msa0003030	Msa1387750	0.886732	2.647271e-72	-8.615850e-47
Msa0003030	Msa1390760	0.831191	1.919642e-55	-8.615850e-47
Msa0003030	Msa1407550	0.813689	2.254532e-51	-8.615850e-47
Msa0003030	Msa1413570	0.855239	7.207709e-62	-8.615850e-47
Msa0003030	Msa1445250	-0.816090	6.615153e-52	-8.615850e-47
Msa0003030	Msa1446510	0.932989	3.709700e-95	-8.615850e-47
Msa0003030	Msa1463510	0.822599	2.173013e-53	-8.615850e-47
Msa0003030	Msa1465890	0.843413	1.422914e-58	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0003030	MtrunA17_Chr1g0155981	100.000	206	0	1	206	1	206	1.12e-150	416
Msa0003030	MtrunA17_Chr7g0237121	94.660	206	11	1	206	1	206	1.49e-143	398
Msa0003030	MtrunA17_Chr5g0437981	91.262	206	18	1	206	1	206	3.20e-138	384

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0003030	AT5G48760.1	85.922	206	29	0	1	206	1	206	1.91e-131	368
Msa0003030	AT5G48760.2	85.922	206	29	0	1	206	1	206	1.91e-131	368
Msa0003030	AT3G07110.1	84.951	206	31	0	1	206	1	206	6.59e-130	364
Msa0003030	AT4G13170.1	84.951	206	31	0	1	206	1	206	9.06e-130	363
Msa0003030	AT3G07110.2	84.541	207	31	1	1	206	1	207	2.75e-128	360
Msa0003030	AT3G24830.1	83.495	206	34	0	1	206	1	206	5.30e-128	359

Find 97 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATGGTCCTATTCACTTTA+GGG	0.192347	1_1:-5472604	Msa0003030:CDS
CTCATGGTCCTATTCACTTT+AGG	0.198145	1_1:-5472605	Msa0003030:CDS
ATCTCAAATGCAGGATATTT+AGG	0.278445	1_1:+5469092	None:intergenic
GGGCTCCCTCTAAGATCTTT+TGG	0.279612	1_1:-5472584	Msa0003030:CDS
TGAGATGAATATAGACTAAC+TGG	0.300848	1_1:-5469075	Msa0003030:three_prime_UTR
CATTATTATAAGGTTTAGTT+TGG	0.304616	1_1:-5469360	Msa0003030:three_prime_UTR
GCTTGTTATTCTATGTTTGT+TGG	0.318515	1_1:-5469296	Msa0003030:three_prime_UTR
TATTTGTTAACATTATTATA+AGG	0.320139	1_1:-5469370	Msa0003030:three_prime_UTR
TTCCAATAGTGTTGCCCCTT+TGG	0.322660	1_1:-5469201	Msa0003030:three_prime_UTR
ACTATGAAGCTTATAGTTGT+TGG	0.329462	1_1:-5469138	Msa0003030:three_prime_UTR
CACCAAAGGGGCAACACTAT+TGG	0.342959	1_1:+5469199	None:intergenic
GACGGCCGAGCATGTGGTGG+CGG	0.371739	1_1:+5472772	None:intergenic
GGGAGCAAGGACTTCAAGTT+GGG	0.380650	1_1:+5469409	None:intergenic
TATAGGAGCTGGAGGATAAG+AGG	0.397991	1_1:-5469523	Msa0003030:intron
TGTGAAGAAATTTGTGCTTC+AGG	0.399041	1_1:-5472693	Msa0003030:CDS
AACCTAAAACAGTTCATGTT+GGG	0.399934	1_1:-5472990	Msa0003030:five_prime_UTR
AATAACAAGCAAAACTGAAA+TGG	0.403835	1_1:+5469309	None:intergenic
TGAAGTATATGAGATTTCTA+AGG	0.407625	1_1:-5472650	Msa0003030:CDS
CGGCGAGGTTGTTCTTCTCC+GGG	0.411234	1_1:+5472862	None:intergenic
CAGGATATTTAGGCACCTAT+TGG	0.413197	1_1:+5469102	None:intergenic
GGCTGCACTCGCGCGATTGA+AGG	0.416813	1_1:-5469884	Msa0003030:CDS
GAGGAAGGAACGCGCAGGTT+TGG	0.417217	1_1:-5469504	Msa0003030:CDS
ATATATGATGTTACACCAAA+GGG	0.421265	1_1:+5469186	None:intergenic
GTTCTTCTCCGGGGACAGCT+AGG	0.425336	1_1:+5472872	None:intergenic
GCGGCGAGGTTGTTCTTCTC+CGG	0.430830	1_1:+5472861	None:intergenic
TAGGGTGTTGAGACTTCAAA+AGG	0.434162	1_1:-5469701	Msa0003030:CDS
ATCCTCTTGATCTTGTCATA+TGG	0.437541	1_1:+5469841	None:intergenic
CGGGAGCAAGGACTTCAAGT+TGG	0.439216	1_1:+5469408	None:intergenic
AATAGTACTCAGTACTTAAC+GGG	0.449959	1_1:+5469389	None:intergenic
AAATAGTACTCAGTACTTAA+CGG	0.452401	1_1:+5469388	None:intergenic
GGATTATTGATGCTGCCAAT+AGG	0.469766	1_1:-5469117	Msa0003030:three_prime_UTR
GAGGGAGCCCTAAAGTGAAT+AGG	0.470476	1_1:+5472597	None:intergenic
GGTTCTTACTTGAGAGCATC+GGG	0.471713	1_1:+5469811	None:intergenic
AGAAGCTGCTCAATAAATTG+AGG	0.480348	1_1:-5469469	Msa0003030:CDS
AACACTATTGGAAAGTAAGT+TGG	0.484076	1_1:+5469211	None:intergenic
ATATGAGATTTCTAAGGAAG+AGG	0.501956	1_1:-5472644	Msa0003030:CDS
TTCTTCTCCGGGGACAGCTA+GGG	0.509116	1_1:+5472873	None:intergenic
CGCGCGATTGAAGGTCTATG+AGG	0.509761	1_1:-5469875	Msa0003030:CDS
CTTAGCGCATATGCCTGATC+CGG	0.515048	1_1:+5472812	None:intergenic
GAGAAGAACAACCTCGCCGC+CGG	0.515259	1_1:-5472858	Msa0003030:five_prime_UTR
GAAGCTGCTCAATAAATTGA+GGG	0.519049	1_1:-5469468	Msa0003030:CDS
GACGCCCGCCACCACATGCT+CGG	0.519214	1_1:-5472777	Msa0003030:CDS
ACGGCCGAGCATGTGGTGGC+GGG	0.522437	1_1:+5472773	None:intergenic
GAACCTAAAACAGTTCATGT+TGG	0.527227	1_1:-5472991	Msa0003030:five_prime_UTR
TCTATATTCATCTCAAATGC+AGG	0.528432	1_1:+5469083	None:intergenic
AGTGCGCCAAAAGATCTTAG+AGG	0.534021	1_1:+5472578	None:intergenic
TGGTTCTTACTTGAGAGCAT+CGG	0.539745	1_1:+5469810	None:intergenic
GAGAAGCTCCTTTGCGACAA+TGG	0.544115	1_1:+5472743	None:intergenic
TTCTTGTTTATAGGAGCTGG+AGG	0.546787	1_1:-5469531	Msa0003030:intron
GGACACAAATACTGCTTGCT+CGG	0.550212	1_1:-5469679	Msa0003030:CDS
ATGAATACTAAACCTTCTCA+TGG	0.560213	1_1:-5472621	Msa0003030:CDS
CTCAGTACTTAACGGGAGCA+AGG	0.561409	1_1:+5469396	None:intergenic
GTCGCAAAGGAGCTTCTCAA+TGG	0.561981	1_1:-5472738	Msa0003030:CDS
ATGAAGTTTCCGCGGGCACA+AGG	0.562034	1_1:+5469042	None:intergenic
AGTTGTCATCAGAGGTTGGA+TGG	0.565112	1_1:-5469654	Msa0003030:CDS
GTACTTTCACCTTGTGCCCG+CGG	0.569360	1_1:-5469051	Msa0003030:three_prime_UTR
CATCAAACCCTAGCTGTCCC+CGG	0.571320	1_1:-5472880	Msa0003030:five_prime_UTR
AGGCAAGACGGCCGAGCATG+TGG	0.572354	1_1:+5472766	None:intergenic
TTGATCTTGTCATATGGAGG+AGG	0.574582	1_1:+5469847	None:intergenic
CTCCATATGACAAGATCAAG+AGG	0.577162	1_1:-5469843	Msa0003030:CDS
TCTTGCCTCCATTGTCGCAA+AGG	0.579194	1_1:-5472751	Msa0003030:CDS
CATATATGATGTTACACCAA+AGG	0.581184	1_1:+5469185	None:intergenic
ACAGCTAGGGTTTGATGATG+AGG	0.581750	1_1:+5472886	None:intergenic
TCAGAGGTTGGATGGAACTA+CGG	0.586349	1_1:-5469646	Msa0003030:CDS
GGAGCTGGAGGATAAGAGGA+AGG	0.587458	1_1:-5469519	Msa0003030:CDS
GAACTACGGTGGCATCATCA+AGG	0.590785	1_1:-5469632	Msa0003030:intron
TTAGAAAATGAAGTTTCCGC+GGG	0.591210	1_1:+5469035	None:intergenic
GGACAGTTGTCATCAGAGGT+TGG	0.592395	1_1:-5469658	Msa0003030:CDS
CTCTTGATCTTGTCATATGG+AGG	0.593959	1_1:+5469844	None:intergenic
GCTCGGACAGTTGTCATCAG+AGG	0.597789	1_1:-5469662	Msa0003030:CDS
GGAGCTTCTCAATGGTCAGA+AGG	0.600116	1_1:-5472730	Msa0003030:CDS
GTGCGCCAAAAGATCTTAGA+GGG	0.602717	1_1:+5472579	None:intergenic
CAAGACGGCCGAGCATGTGG+TGG	0.603581	1_1:+5472769	None:intergenic
CTTAGAAAATGAAGTTTCCG+CGG	0.608511	1_1:+5469034	None:intergenic
TTGCGACAATGGAGGCAAGA+CGG	0.613146	1_1:+5472754	None:intergenic
ACCTAAAACAGTTCATGTTG+GGG	0.616029	1_1:-5472989	Msa0003030:five_prime_UTR
AGAATCTGTTTCCGGCGGCG+AGG	0.617786	1_1:+5472847	None:intergenic
AGGGTGTTGAGACTTCAAAA+GGG	0.620018	1_1:-5469700	Msa0003030:CDS
GCGCGATTGAAGGTCTATGA+GGG	0.624683	1_1:-5469874	Msa0003030:CDS
CTAAGCTTAGGGGTTTGTCG+TGG	0.626595	1_1:-5469016	None:intergenic
ATATGACAAGATCAAGAGGA+TGG	0.634497	1_1:-5469839	Msa0003030:CDS
GGAGCAAGGACTTCAAGTTG+GGG	0.640419	1_1:+5469410	None:intergenic
TCTCCACGCTTAGTCTTGTG+TGG	0.642845	1_1:+5469907	None:intergenic
ATACCACACAAGACTAAGCG+TGG	0.643021	1_1:-5469910	Msa0003030:CDS
AAGCTCCTTTGCGACAATGG+AGG	0.645821	1_1:+5472746	None:intergenic
AGCAAGGACTTCAAGTTGGG+GGG	0.650449	1_1:+5469412	None:intergenic
GGCGAGGTTGTTCTTCTCCG+GGG	0.652369	1_1:+5472863	None:intergenic
GATAAGAGGAAGGAACGCGC+AGG	0.659068	1_1:-5469509	Msa0003030:CDS
GCTTCTCAATGGTCAGAAGG+TGG	0.662927	1_1:-5472727	Msa0003030:CDS
ACACAAGACTAAGCGTGGAG+AGG	0.667676	1_1:-5469905	Msa0003030:CDS
AAGTGAATAGGACCATGAGA+AGG	0.669515	1_1:+5472609	None:intergenic
GAGATGAATATAGACTAACT+GGG	0.687169	1_1:-5469074	Msa0003030:three_prime_UTR
GAGCAAGGACTTCAAGTTGG+GGG	0.688692	1_1:+5469411	None:intergenic
GAAGAAATTTGTGCTTCAGG+TGG	0.691821	1_1:-5472690	Msa0003030:CDS
GAGGTTGGATGGAACTACGG+TGG	0.706495	1_1:-5469643	Msa0003030:CDS
TATATGATGTTACACCAAAG+GGG	0.708571	1_1:+5469187	None:intergenic
AGATGAATATAGACTAACTG+GGG	0.722189	1_1:-5469073	Msa0003030:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTATTTTTATAAATTTATT+AGG	-	chr1_1:5471012-5471031	Msa0003030:intron	0.0%
!!!	ATTTTTGTTTAATTTGATAT+TGG	-	chr1_1:5469540-5469559	Msa0003030:intron	10.0%
!!!	TTTTTGTTTAATTTGATATT+GGG	-	chr1_1:5469541-5469560	Msa0003030:intron	10.0%
!!!	TTTTCTTAATTAAATTTTGT+TGG	-	chr1_1:5470919-5470938	Msa0003030:intron	10.0%
!!!	TTTCTTAATTAAATTTTGTT+GGG	-	chr1_1:5470920-5470939	Msa0003030:intron	10.0%
!!!	TTTTTTTGATTATTTGATAA+TGG	-	chr1_1:5470954-5470973	Msa0003030:intron	10.0%
!!!	TTTTTTGATTATTTGATAAT+GGG	-	chr1_1:5470955-5470974	Msa0003030:intron	10.0%
!!!	GTTTTTTTATATGATTTATA+AGG	-	chr1_1:5471079-5471098	Msa0003030:intron	10.0%
!!!	TATTTGTTAACATTATTATA+AGG	-	chr1_1:5472653-5472672	Msa0003030:CDS	10.0%
!!!	TGTATTTGTATTTGTTTTTT+AGG	-	chr1_1:5469696-5469715	Msa0003030:CDS	15.0%
!!	TTTGATTATTAGATTGAATT+GGG	-	chr1_1:5469861-5469880	Msa0003030:CDS	15.0%
!!!	ATGATTTGTGATTATAAATA+TGG	-	chr1_1:5469986-5470005	Msa0003030:intron	15.0%
!!!	TATGTTATTTCTATAACAAA+AGG	+	chr1_1:5470262-5470281	None:intergenic	15.0%
!!	ATATGATTTATAAGGTTATT+TGG	-	chr1_1:5471087-5471106	Msa0003030:intron	15.0%
!!	CTGTAAATTATACAATAAAA+TGG	+	chr1_1:5472236-5472255	None:intergenic	15.0%
!!!	TTTTATTGTGTTTTGTTGAT+TGG	-	chr1_1:5469499-5469518	Msa0003030:CDS	20.0%
!!!	TTTTGTTGATTGGATTATAA+TGG	-	chr1_1:5469509-5469528	Msa0003030:CDS	20.0%
!!!	TTTGTTGATTGGATTATAAT+GGG	-	chr1_1:5469510-5469529	Msa0003030:CDS	20.0%
!!!	TATTATTAGCATTTTGTCTA+TGG	-	chr1_1:5469636-5469655	Msa0003030:CDS	20.0%
!!!	ATTATTAGCATTTTGTCTAT+GGG	-	chr1_1:5469637-5469656	Msa0003030:CDS	20.0%
!!!	TTTGTATTTGTTTAGTTTGA+CGG	-	chr1_1:5469673-5469692	Msa0003030:CDS	20.0%
!!!	GTATTTGTTTTTTAGGAATT+TGG	-	chr1_1:5469703-5469722	Msa0003030:intron	20.0%
!!!	GATGTTTAATGTGTTTTATA+AGG	-	chr1_1:5469773-5469792	Msa0003030:intron	20.0%
!!!	ATGTGTTTTATAAGGTTATT+TGG	-	chr1_1:5469781-5469800	Msa0003030:intron	20.0%
!!	GTTTGATTATTAGATTGAAT+TGG	-	chr1_1:5469860-5469879	Msa0003030:CDS	20.0%
!!	AGTTAATAAGTCAATTGAAA+TGG	+	chr1_1:5470014-5470033	None:intergenic	20.0%
!!	TTTACAAGAACTTATGAAAA+TGG	-	chr1_1:5470070-5470089	Msa0003030:intron	20.0%
!!!	GTTTTGAAGTGATTAATTAA+GGG	-	chr1_1:5470376-5470395	Msa0003030:intron	20.0%
!!	ATTTGATAGAATTATGAAGT+TGG	-	chr1_1:5470430-5470449	Msa0003030:intron	20.0%
!!	CAATTCTATCAAATAAACAA+AGG	+	chr1_1:5470775-5470794	None:intergenic	20.0%
!!!	AAAGTGTTGTTATTTTTTAG+AGG	-	chr1_1:5470810-5470829	Msa0003030:intron	20.0%
!!!	AAGTGTTGTTATTTTTTAGA+GGG	-	chr1_1:5470811-5470830	Msa0003030:intron	20.0%
!!	TTTGCTTATATGATTGAATT+GGG	-	chr1_1:5471180-5471199	Msa0003030:intron	20.0%
!!	TTTGAAAGAACTTATGAAAA+CGG	-	chr1_1:5471364-5471383	Msa0003030:intron	20.0%
!!	ATAGAAAAAATGTAGATCTT+AGG	-	chr1_1:5471809-5471828	Msa0003030:intron	20.0%
!!!	TTCAAGTGGTTATTTAATTT+TGG	-	chr1_1:5471959-5471978	Msa0003030:intron	20.0%
!!!	CTTTTTGTTGTTGAATTAAA+AGG	-	chr1_1:5472262-5472281	Msa0003030:intron	20.0%
!!!	GTGATTTTTTTTGTTTTGTT+TGG	-	chr1_1:5472413-5472432	Msa0003030:intron	20.0%
!!!	GTGGTTTTGAATTTTTTAAT+TGG	-	chr1_1:5472468-5472487	Msa0003030:intron	20.0%
!!!	TTAATTGGTTTCTTGTTTAT+AGG	-	chr1_1:5472483-5472502	Msa0003030:intron	20.0%
!!	CATTATTATAAGGTTTAGTT+TGG	-	chr1_1:5472663-5472682	Msa0003030:CDS	20.0%
!!!	TTCCAAAATTGTCATTTTTA+AGG	+	chr1_1:5472754-5472773	None:intergenic	20.0%
!!	TGAATGAGTGTGTAATTTTT+GGG	+	chr1_1:5469106-5469125	None:intergenic	25.0%
!!	ATGAATGAGTGTGTAATTTT+TGG	+	chr1_1:5469107-5469126	None:intergenic	25.0%
!	TGAAGTATATGAGATTTCTA+AGG	-	chr1_1:5469373-5469392	Msa0003030:three_prime_UTR	25.0%
!!!	TTGTTTTTTAGGAATTTGGT+AGG	-	chr1_1:5469707-5469726	Msa0003030:intron	25.0%
!	AGATCTATTTATTCAGCATA+TGG	+	chr1_1:5469750-5469769	None:intergenic	25.0%
!!!	TTGGCTTTGTGATATAATTT+AGG	-	chr1_1:5469813-5469832	Msa0003030:intron	25.0%
!!	ACATAGAATGTCTTTTTCTA+TGG	-	chr1_1:5469951-5469970	Msa0003030:intron	25.0%
!!!	TACGTTATTTCTACAACAAA+AGG	+	chr1_1:5470202-5470221	None:intergenic	25.0%
!	CAAAAAAGAACATTATACGT+GGG	+	chr1_1:5470352-5470371	None:intergenic	25.0%
!!!	GTATAATGTTCTTTTTTGGA+GGG	-	chr1_1:5470354-5470373	Msa0003030:intron	25.0%
!!!	GGTTTTGAAGTGATTAATTA+AGG	-	chr1_1:5470375-5470394	Msa0003030:intron	25.0%
!!!	AGAAGTGTTCTTTGTTTATT+TGG	-	chr1_1:5470507-5470526	Msa0003030:intron	25.0%
!	TTAGCTTATTGATGTTTGAA+TGG	-	chr1_1:5470572-5470591	Msa0003030:intron	25.0%
!!!	GAAAAGTGTTATTAGAAATG+TGG	-	chr1_1:5470655-5470674	Msa0003030:intron	25.0%
!	TTTGATTAGGTAGAATGTAT+TGG	-	chr1_1:5470697-5470716	Msa0003030:intron	25.0%
!	TTGATTAGGTAGAATGTATT+GGG	-	chr1_1:5470698-5470717	Msa0003030:intron	25.0%
!!	TTATGTAGAATGCTTTCTTT+TGG	-	chr1_1:5470855-5470874	Msa0003030:intron	25.0%
!!	TATGTAGAATGCTTTCTTTT+GGG	-	chr1_1:5470856-5470875	Msa0003030:intron	25.0%
!!	GTTTGGACTAGATATAATTT+AGG	-	chr1_1:5471132-5471151	Msa0003030:intron	25.0%
!	GTTTGCTTATATGATTGAAT+TGG	-	chr1_1:5471179-5471198	Msa0003030:intron	25.0%
!!!	CTTATTTTCATAAACTCTCT+AGG	-	chr1_1:5471415-5471434	Msa0003030:intron	25.0%
!	ATCTGATAGAATCATAAAGT+TGG	-	chr1_1:5471652-5471671	Msa0003030:intron	25.0%
!!	ATTTAGAATGATTAGACTCA+TGG	-	chr1_1:5471749-5471768	Msa0003030:intron	25.0%
!!	TTCGTAAAAGTGTAGATAAT+AGG	-	chr1_1:5471844-5471863	Msa0003030:intron	25.0%
!!	TAAAAGTGTAGATAATAGGA+GGG	-	chr1_1:5471848-5471867	Msa0003030:intron	25.0%
!	TGAATGAGTGAATGAAATTA+GGG	-	chr1_1:5472304-5472323	Msa0003030:intron	25.0%
!!	GAATTTGATCAACAATTTTG+TGG	-	chr1_1:5472449-5472468	Msa0003030:intron	25.0%
!	AAATAGTACTCAGTACTTAA+CGG	+	chr1_1:5472638-5472657	None:intergenic	25.0%
!	AATAACAAGCAAAACTGAAA+TGG	+	chr1_1:5472717-5472736	None:intergenic	25.0%
!!	GACCTTAAAAATGACAATTT+TGG	-	chr1_1:5472749-5472768	Msa0003030:CDS	25.0%
!	ATATATGATGTTACACCAAA+GGG	+	chr1_1:5472840-5472859	None:intergenic	25.0%
!!	AAACTTCATTTTCTAAGCTT+AGG	-	chr1_1:5472995-5473014	Msa0003030:five_prime_UTR	25.0%
!!	AACTTCATTTTCTAAGCTTA+GGG	-	chr1_1:5472996-5473015	Msa0003030:five_prime_UTR	25.0%
	AACCTAAAACAGTTCATGTT+GGG	-	chr1_1:5469033-5469052	Msa0003030:three_prime_UTR	30.0%
!!!	TTAAGCCCATGAACTTTTTT+GGG	+	chr1_1:5469064-5469083	None:intergenic	30.0%
!!!	TTTAAGCCCATGAACTTTTT+TGG	+	chr1_1:5469065-5469084	None:intergenic	30.0%
!!	CATTTTTGAGAATCTGTTTC+CGG	+	chr1_1:5469187-5469206	None:intergenic	30.0%
	AGATTCTCAAAAATGGTTTC+CGG	-	chr1_1:5469192-5469211	Msa0003030:three_prime_UTR	30.0%
!	ATATGAGATTTCTAAGGAAG+AGG	-	chr1_1:5469379-5469398	Msa0003030:exon	30.0%
	ATGAATACTAAACCTTCTCA+TGG	-	chr1_1:5469402-5469421	Msa0003030:CDS	30.0%
	GTATAAAAAAACAGAGCAAG+TGG	+	chr1_1:5469612-5469631	None:intergenic	30.0%
!	TTTTGTCTATGGGATTTCAT+TGG	-	chr1_1:5469647-5469666	Msa0003030:CDS	30.0%
	TTTGTCTATGGGATTTCATT+GGG	-	chr1_1:5469648-5469667	Msa0003030:CDS	30.0%
!!	GGTTATTTGGTGTTTGTAAT+TGG	-	chr1_1:5469794-5469813	Msa0003030:intron	30.0%
!	TAGAATGTCTTTTTCTATGG+AGG	-	chr1_1:5469954-5469973	Msa0003030:intron	30.0%
!	AGAATGTCTTTTTCTATGGA+GGG	-	chr1_1:5469955-5469974	Msa0003030:intron	30.0%
	TTATGAAAATGGCTTATGAC+AGG	-	chr1_1:5470081-5470100	Msa0003030:intron	30.0%
	CCAAAAAAGAACATTATACG+TGG	+	chr1_1:5470353-5470372	None:intergenic	30.0%
!!!	CCACGTATAATGTTCTTTTT+TGG	-	chr1_1:5470350-5470369	Msa0003030:intron	30.0%
!!!	CGTATAATGTTCTTTTTTGG+AGG	-	chr1_1:5470353-5470372	Msa0003030:intron	30.0%
	TTGAATGTTGTGTTATGTTC+AGG	-	chr1_1:5470474-5470493	Msa0003030:intron	30.0%
	AAACACCAAATTACCTTATG+GGG	+	chr1_1:5470548-5470567	None:intergenic	30.0%
	CAAACACCAAATTACCTTAT+GGG	+	chr1_1:5470549-5470568	None:intergenic	30.0%
	ACAAACACCAAATTACCTTA+TGG	+	chr1_1:5470550-5470569	None:intergenic	30.0%
!	ACAAAACCACAAAACACTTT+TGG	+	chr1_1:5470890-5470909	None:intergenic	30.0%
!!	ATTAGGAAGTGTTGATATTG+TGG	-	chr1_1:5471029-5471048	Msa0003030:intron	30.0%
!!	GGTTATTTGGTGTTTGTAAT+TGG	-	chr1_1:5469794-5469813	Msa0003030:intron	30.0%
	TAGTTTATCTAAACATGCCT+AGG	-	chr1_1:5471548-5471567	Msa0003030:intron	30.0%
	TTGAAGTGATTAATGAATCC+AGG	-	chr1_1:5471597-5471616	Msa0003030:intron	30.0%
!!	AACTTTAAAACAATGCATCC+TGG	+	chr1_1:5471618-5471637	None:intergenic	30.0%
	TTGAATGTTGTGTTGTGTTA+TGG	-	chr1_1:5471699-5471718	Msa0003030:intron	30.0%
!!!	GGTTTTTGAGAAGTGTTATT+TGG	-	chr1_1:5471724-5471743	Msa0003030:intron	30.0%
	TAGATCTTAGGATCATAACA+AGG	-	chr1_1:5471821-5471840	Msa0003030:intron	30.0%
!	GTAAAAGTGTAGATAATAGG+AGG	-	chr1_1:5471847-5471866	Msa0003030:intron	30.0%
!!!	TTTTTTTAGCGCTATTCAAG+TGG	-	chr1_1:5471945-5471964	Msa0003030:intron	30.0%
	GTTGAACGTCTTTGTATATT+TGG	-	chr1_1:5471997-5472016	Msa0003030:intron	30.0%
	CTGAATGAGTGAATGAAATT+AGG	-	chr1_1:5472303-5472322	Msa0003030:intron	30.0%
	AATAGTACTCAGTACTTAAC+GGG	+	chr1_1:5472637-5472656	None:intergenic	30.0%
!!	GCTTGTTATTCTATGTTTGT+TGG	-	chr1_1:5472727-5472746	Msa0003030:CDS	30.0%
	AACACTATTGGAAAGTAAGT+TGG	+	chr1_1:5472815-5472834	None:intergenic	30.0%
	TATATGATGTTACACCAAAG+GGG	+	chr1_1:5472839-5472858	None:intergenic	30.0%
	CATATATGATGTTACACCAA+AGG	+	chr1_1:5472841-5472860	None:intergenic	30.0%
	ACTATGAAGCTTATAGTTGT+TGG	-	chr1_1:5472885-5472904	Msa0003030:five_prime_UTR	30.0%
	ATCTCAAATGCAGGATATTT+AGG	+	chr1_1:5472934-5472953	None:intergenic	30.0%
	TCTATATTCATCTCAAATGC+AGG	+	chr1_1:5472943-5472962	None:intergenic	30.0%
	TGAGATGAATATAGACTAAC+TGG	-	chr1_1:5472948-5472967	Msa0003030:five_prime_UTR	30.0%
	GAGATGAATATAGACTAACT+GGG	-	chr1_1:5472949-5472968	Msa0003030:five_prime_UTR	30.0%
	AGATGAATATAGACTAACTG+GGG	-	chr1_1:5472950-5472969	Msa0003030:five_prime_UTR	30.0%
!	ACTTCATTTTCTAAGCTTAG+GGG	-	chr1_1:5472997-5473016	Msa0003030:five_prime_UTR	30.0%
	GAACCTAAAACAGTTCATGT+TGG	-	chr1_1:5469032-5469051	Msa0003030:three_prime_UTR	35.0%
	ACCTAAAACAGTTCATGTTG+GGG	-	chr1_1:5469034-5469053	Msa0003030:three_prime_UTR	35.0%
!	TTGGGCTTTTCTACTTTGTT+TGG	+	chr1_1:5469088-5469107	None:intergenic	35.0%
	CGGAAACAGATTCTCAAAAA+TGG	-	chr1_1:5469185-5469204	Msa0003030:three_prime_UTR	35.0%
	TGTGAAGAAATTTGTGCTTC+AGG	-	chr1_1:5469330-5469349	Msa0003030:three_prime_UTR	35.0%
	TCATGGTCCTATTCACTTTA+GGG	-	chr1_1:5469419-5469438	Msa0003030:CDS	35.0%
!	ATGTAGCTGTTGAGTGTTTT+TGG	-	chr1_1:5469899-5469918	Msa0003030:CDS	35.0%
!	CTGTTTTCATTAGCTACTCT+TGG	+	chr1_1:5470142-5470161	None:intergenic	35.0%
!	AGTGATTAATTAAGGGTGCA+TGG	-	chr1_1:5470383-5470402	Msa0003030:intron	35.0%
	AATGTTGTGTTATGTTCAGG+AGG	-	chr1_1:5470477-5470496	Msa0003030:intron	35.0%
	ATGTTGTGTTATGTTCAGGA+GGG	-	chr1_1:5470478-5470497	Msa0003030:intron	35.0%
	AACACCAAATTACCTTATGG+GGG	+	chr1_1:5470547-5470566	None:intergenic	35.0%
!!	TTGACGAGTGTTGTTTGATT+AGG	-	chr1_1:5470684-5470703	Msa0003030:intron	35.0%
	ATTAGGTAGAATGTATTGGG+AGG	-	chr1_1:5470701-5470720	Msa0003030:intron	35.0%
	TTAGGTAGAATGTATTGGGA+GGG	-	chr1_1:5470702-5470721	Msa0003030:intron	35.0%
!!	TAGAATGCTTTCTTTTGGGA+GGG	-	chr1_1:5470860-5470879	Msa0003030:intron	35.0%
!!	TTTGGTGTTTGTAATTGGCT+TGG	-	chr1_1:5469799-5469818	Msa0003030:intron	35.0%
!!	TTGCTGTTGAGTGTTTTTCA+AGG	-	chr1_1:5471222-5471241	Msa0003030:intron	35.0%
	AGACATTCTACACAATCACA+GGG	+	chr1_1:5471262-5471281	None:intergenic	35.0%
	AAGACATTCTACACAATCAC+AGG	+	chr1_1:5471263-5471282	None:intergenic	35.0%
	GCTTGATTATGCATGTTGTT+TGG	-	chr1_1:5471308-5471327	Msa0003030:intron	35.0%
	TTATGAAAACGGCTTATGAC+AGG	-	chr1_1:5471375-5471394	Msa0003030:intron	35.0%
	AAAAAGAGGACATTCTACCT+AGG	+	chr1_1:5471568-5471587	None:intergenic	35.0%
!	TAGGTAGAATGTCCTCTTTT+TGG	-	chr1_1:5471567-5471586	Msa0003030:intron	35.0%
!	TAGAATGTCCTCTTTTTGGA+GGG	-	chr1_1:5471571-5471590	Msa0003030:intron	35.0%
	TTCAAAAACCCTCCAAAAAG+AGG	+	chr1_1:5471582-5471601	None:intergenic	35.0%
	AATGTTGTGTTGTGTTATGG+AGG	-	chr1_1:5471702-5471721	Msa0003030:intron	35.0%
	ATGTTGTGTTGTGTTATGGA+GGG	-	chr1_1:5471703-5471722	Msa0003030:intron	35.0%
	AGACTCATGGTTGTCAAAAT+CGG	-	chr1_1:5471762-5471781	Msa0003030:intron	35.0%
	ATACCCAAACGATCTTTAGT+GGG	+	chr1_1:5471791-5471810	None:intergenic	35.0%
	TATACCCAAACGATCTTTAG+TGG	+	chr1_1:5471792-5471811	None:intergenic	35.0%
!	ATGTAGAATGCTGTCTTTTG+AGG	-	chr1_1:5471890-5471909	Msa0003030:intron	35.0%
!	TGTAGAATGCTGTCTTTTGA+GGG	-	chr1_1:5471891-5471910	Msa0003030:intron	35.0%
	ATCCTCTTGATCTTGTCATA+TGG	+	chr1_1:5472185-5472204	None:intergenic	35.0%
	ATATGACAAGATCAAGAGGA+TGG	-	chr1_1:5472184-5472203	Msa0003030:intron	35.0%
	AGAAGCTGCTCAATAAATTG+AGG	-	chr1_1:5472554-5472573	Msa0003030:intron	35.0%
	GAAGCTGCTCAATAAATTGA+GGG	-	chr1_1:5472555-5472574	Msa0003030:intron	35.0%
	TTAGAAAATGAAGTTTCCGC+GGG	+	chr1_1:5472991-5473010	None:intergenic	35.0%
	CTTAGAAAATGAAGTTTCCG+CGG	+	chr1_1:5472992-5473011	None:intergenic	35.0%
	GCAAGCCCAAAAAAGTTCAT+GGG	-	chr1_1:5469056-5469075	Msa0003030:three_prime_UTR	40.0%
!!	TTTTGAGAATCTGTTTCCGG+CGG	+	chr1_1:5469184-5469203	None:intergenic	40.0%
	TCAAAAATGGTTTCCGGATC+AGG	-	chr1_1:5469198-5469217	Msa0003030:three_prime_UTR	40.0%
	GAAGAAATTTGTGCTTCAGG+TGG	-	chr1_1:5469333-5469352	Msa0003030:three_prime_UTR	40.0%
	AAGTGAATAGGACCATGAGA+AGG	+	chr1_1:5469417-5469436	None:intergenic	40.0%
	CTCATGGTCCTATTCACTTT+AGG	-	chr1_1:5469418-5469437	Msa0003030:CDS	40.0%
!!!	TAGCTGTTGAGTGTTTTTGG+AGG	-	chr1_1:5469902-5469921	Msa0003030:CDS	40.0%
!!!	AGCTGTTGAGTGTTTTTGGA+GGG	-	chr1_1:5469903-5469922	Msa0003030:CDS	40.0%
	ATGATACCCACAGATGCTAT+AGG	-	chr1_1:5470299-5470318	Msa0003030:intron	40.0%
!!	TCATTACTGATTCCCCCATA+AGG	-	chr1_1:5470532-5470551	Msa0003030:intron	40.0%
	GATTCCCCCATAAGGTAATT+TGG	-	chr1_1:5470540-5470559	Msa0003030:intron	40.0%
!	GTAGAATGCTTTCTTTTGGG+AGG	-	chr1_1:5470859-5470878	Msa0003030:intron	40.0%
!!!	GGTTTGCCAAAAGTGTTTTG+TGG	-	chr1_1:5470881-5470900	Msa0003030:intron	40.0%
	CACAAGATCTAGACAACACA+AGG	+	chr1_1:5471058-5471077	None:intergenic	40.0%
!!	GTAATTGGCTTGGTGATGTT+TGG	-	chr1_1:5471115-5471134	Msa0003030:intron	40.0%
!	GTAGAATGTCCTCTTTTTGG+AGG	-	chr1_1:5471570-5471589	Msa0003030:intron	40.0%
	GACTCATGGTTGTCAAAATC+GGG	-	chr1_1:5471763-5471782	Msa0003030:intron	40.0%
	GATCCCACTAAAGATCGTTT+GGG	-	chr1_1:5471785-5471804	Msa0003030:intron	40.0%
!	TGTTGTTAAGTGTTGCGTGA+TGG	-	chr1_1:5472047-5472066	Msa0003030:intron	40.0%
	TTGATCTTGTCATATGGAGG+AGG	+	chr1_1:5472179-5472198	None:intergenic	40.0%
	CTCTTGATCTTGTCATATGG+AGG	+	chr1_1:5472182-5472201	None:intergenic	40.0%
	CTCCATATGACAAGATCAAG+AGG	-	chr1_1:5472180-5472199	Msa0003030:intron	40.0%
!	TGGTTCTTACTTGAGAGCAT+CGG	+	chr1_1:5472216-5472235	None:intergenic	40.0%
!!	TAGGGTGTTGAGACTTCAAA+AGG	-	chr1_1:5472322-5472341	Msa0003030:intron	40.0%
!!	AGGGTGTTGAGACTTCAAAA+GGG	-	chr1_1:5472323-5472342	Msa0003030:intron	40.0%
!	GGTTTCTTGTTTATAGGAGC+TGG	-	chr1_1:5472489-5472508	Msa0003030:intron	40.0%
!	TTCTTGTTTATAGGAGCTGG+AGG	-	chr1_1:5472492-5472511	Msa0003030:intron	40.0%
	GGATTATTGATGCTGCCAAT+AGG	-	chr1_1:5472906-5472925	Msa0003030:five_prime_UTR	40.0%
	CAGGATATTTAGGCACCTAT+TGG	+	chr1_1:5472924-5472943	None:intergenic	40.0%
!	GCCCCAACATGAACTGTTTT+AGG	+	chr1_1:5469038-5469057	None:intergenic	45.0%
	GGCAAGCCCAAAAAAGTTCA+TGG	-	chr1_1:5469055-5469074	Msa0003030:three_prime_UTR	45.0%
!!	ACAGCTAGGGTTTGATGATG+AGG	+	chr1_1:5469140-5469159	None:intergenic	45.0%
	GTGCGCCAAAAGATCTTAGA+GGG	+	chr1_1:5469447-5469466	None:intergenic	45.0%
	AGTGCGCCAAAAGATCTTAG+AGG	+	chr1_1:5469448-5469467	None:intergenic	45.0%
	TTGCGACCTATAGCATCTGT+GGG	+	chr1_1:5470308-5470327	None:intergenic	45.0%
	TTTGCGACCTATAGCATCTG+TGG	+	chr1_1:5470309-5470328	None:intergenic	45.0%
	GGATCCCACTAAAGATCGTT+TGG	-	chr1_1:5471784-5471803	Msa0003030:intron	45.0%
	ATACCACACAAGACTAAGCG+TGG	-	chr1_1:5472113-5472132	Msa0003030:intron	45.0%
!!	GGTTCTTACTTGAGAGCATC+GGG	+	chr1_1:5472215-5472234	None:intergenic	45.0%
	GGACACAAATACTGCTTGCT+CGG	-	chr1_1:5472344-5472363	Msa0003030:intron	45.0%
	AGTTGTCATCAGAGGTTGGA+TGG	-	chr1_1:5472369-5472388	Msa0003030:intron	45.0%
	TCAGAGGTTGGATGGAACTA+CGG	-	chr1_1:5472377-5472396	Msa0003030:intron	45.0%
	TATAGGAGCTGGAGGATAAG+AGG	-	chr1_1:5472500-5472519	Msa0003030:intron	45.0%
	TTCCAATAGTGTTGCCCCTT+TGG	-	chr1_1:5472822-5472841	Msa0003030:CDS	45.0%
	CTTAGCGCATATGCCTGATC+CGG	+	chr1_1:5469214-5469233	None:intergenic	50.0%
	TTGCGACAATGGAGGCAAGA+CGG	+	chr1_1:5469272-5469291	None:intergenic	50.0%
	TCTTGCCTCCATTGTCGCAA+AGG	-	chr1_1:5469272-5469291	Msa0003030:three_prime_UTR	50.0%
	AAGCTCCTTTGCGACAATGG+AGG	+	chr1_1:5469280-5469299	None:intergenic	50.0%
	GAGAAGCTCCTTTGCGACAA+TGG	+	chr1_1:5469283-5469302	None:intergenic	50.0%
	GTCGCAAAGGAGCTTCTCAA+TGG	-	chr1_1:5469285-5469304	Msa0003030:three_prime_UTR	50.0%
	GGAGCTTCTCAATGGTCAGA+AGG	-	chr1_1:5469293-5469312	Msa0003030:three_prime_UTR	50.0%
	GCTTCTCAATGGTCAGAAGG+TGG	-	chr1_1:5469296-5469315	Msa0003030:three_prime_UTR	50.0%
	GAGGGAGCCCTAAAGTGAAT+AGG	+	chr1_1:5469429-5469448	None:intergenic	50.0%
!!!	GGGCTCCCTCTAAGATCTTT+TGG	-	chr1_1:5469439-5469458	Msa0003030:CDS	50.0%
!	ATCTTTTGGCGCACTGTTCG+TGG	-	chr1_1:5469453-5469472	Msa0003030:CDS	50.0%
!	TCTTTTGGCGCACTGTTCGT+GGG	-	chr1_1:5469454-5469473	Msa0003030:CDS	50.0%
!!	TCTCCACGCTTAGTCTTGTG+TGG	+	chr1_1:5472119-5472138	None:intergenic	50.0%
	ACACAAGACTAAGCGTGGAG+AGG	-	chr1_1:5472118-5472137	Msa0003030:intron	50.0%
	GCGCGATTGAAGGTCTATGA+GGG	-	chr1_1:5472149-5472168	Msa0003030:intron	50.0%
	GGACAGTTGTCATCAGAGGT+TGG	-	chr1_1:5472365-5472384	Msa0003030:intron	50.0%
	GAACTACGGTGGCATCATCA+AGG	-	chr1_1:5472391-5472410	Msa0003030:intron	50.0%
!!	AGCAAGGACTTCAAGTTGGG+GGG	+	chr1_1:5472614-5472633	None:intergenic	50.0%
!!	GAGCAAGGACTTCAAGTTGG+GGG	+	chr1_1:5472615-5472634	None:intergenic	50.0%
!!	GGAGCAAGGACTTCAAGTTG+GGG	+	chr1_1:5472616-5472635	None:intergenic	50.0%
!	GGGAGCAAGGACTTCAAGTT+GGG	+	chr1_1:5472617-5472636	None:intergenic	50.0%
	CTCAGTACTTAACGGGAGCA+AGG	+	chr1_1:5472630-5472649	None:intergenic	50.0%
	CACCAAAGGGGCAACACTAT+TGG	+	chr1_1:5472827-5472846	None:intergenic	50.0%
	CATCAAACCCTAGCTGTCCC+CGG	-	chr1_1:5469143-5469162	Msa0003030:three_prime_UTR	55.0%
	TTCTTCTCCGGGGACAGCTA+GGG	+	chr1_1:5469153-5469172	None:intergenic	55.0%
	CGCGCGATTGAAGGTCTATG+AGG	-	chr1_1:5472148-5472167	Msa0003030:intron	55.0%
	GCTCGGACAGTTGTCATCAG+AGG	-	chr1_1:5472361-5472380	Msa0003030:intron	55.0%
	GAGGTTGGATGGAACTACGG+TGG	-	chr1_1:5472380-5472399	Msa0003030:intron	55.0%
	GGAGCTGGAGGATAAGAGGA+AGG	-	chr1_1:5472504-5472523	Msa0003030:intron	55.0%
	GATAAGAGGAAGGAACGCGC+AGG	-	chr1_1:5472514-5472533	Msa0003030:intron	55.0%
	CGGGAGCAAGGACTTCAAGT+TGG	+	chr1_1:5472618-5472637	None:intergenic	55.0%
	GTACTTTCACCTTGTGCCCG+CGG	-	chr1_1:5472972-5472991	Msa0003030:five_prime_UTR	55.0%
	ATGAAGTTTCCGCGGGCACA+AGG	+	chr1_1:5472984-5473003	None:intergenic	55.0%
	GTTCTTCTCCGGGGACAGCT+AGG	+	chr1_1:5469154-5469173	None:intergenic	60.0%
	GGCGAGGTTGTTCTTCTCCG+GGG	+	chr1_1:5469163-5469182	None:intergenic	60.0%
	CGGCGAGGTTGTTCTTCTCC+GGG	+	chr1_1:5469164-5469183	None:intergenic	60.0%
	GCGGCGAGGTTGTTCTTCTC+CGG	+	chr1_1:5469165-5469184	None:intergenic	60.0%
	GAGAAGAACAACCTCGCCGC+CGG	-	chr1_1:5469165-5469184	Msa0003030:three_prime_UTR	60.0%
	AGAATCTGTTTCCGGCGGCG+AGG	+	chr1_1:5469179-5469198	None:intergenic	60.0%
	GAGGAAGGAACGCGCAGGTT+TGG	-	chr1_1:5472519-5472538	Msa0003030:intron	60.0%
	CAAGACGGCCGAGCATGTGG+TGG	+	chr1_1:5469257-5469276	None:intergenic	65.0%
	AGGCAAGACGGCCGAGCATG+TGG	+	chr1_1:5469260-5469279	None:intergenic	65.0%
	GGCTGCACTCGCGCGATTGA+AGG	-	chr1_1:5472139-5472158	Msa0003030:intron	65.0%
	GACGCCCGCCACCACATGCT+CGG	-	chr1_1:5469246-5469265	Msa0003030:three_prime_UTR	70.0%
	ACGGCCGAGCATGTGGTGGC+GGG	+	chr1_1:5469253-5469272	None:intergenic	70.0%
	GACGGCCGAGCATGTGGTGG+CGG	+	chr1_1:5469254-5469273	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	5469019	5473026	5469019	ID=Msa0003030;Name=Msa0003030
chr1_1	mRNA	5469019	5473026	5469019	ID=Msa0003030-mRNA-1;Parent=Msa0003030;Name=Msa0003030-mRNA-1;_AED=0.11;_eAED=0.11;_QI=185\|1\|1\|1\|1\|1\|4\|378\|206
chr1_1	exon	5469019	5469540	5469019	ID=Msa0003030-mRNA-1:exon:1603;Parent=Msa0003030-mRNA-1
chr1_1	exon	5469633	5469720	5469633	ID=Msa0003030-mRNA-1:exon:1602;Parent=Msa0003030-mRNA-1
chr1_1	exon	5469820	5469936	5469820	ID=Msa0003030-mRNA-1:exon:1601;Parent=Msa0003030-mRNA-1
chr1_1	exon	5472570	5473026	5472570	ID=Msa0003030-mRNA-1:exon:1600;Parent=Msa0003030-mRNA-1
chr1_1	five_prime_UTR	5472842	5473026	5472842	ID=Msa0003030-mRNA-1:five_prime_utr;Parent=Msa0003030-mRNA-1
chr1_1	CDS	5472570	5472841	5472570	ID=Msa0003030-mRNA-1:cds;Parent=Msa0003030-mRNA-1
chr1_1	CDS	5469820	5469936	5469820	ID=Msa0003030-mRNA-1:cds;Parent=Msa0003030-mRNA-1
chr1_1	CDS	5469633	5469720	5469633	ID=Msa0003030-mRNA-1:cds;Parent=Msa0003030-mRNA-1
chr1_1	CDS	5469397	5469540	5469397	ID=Msa0003030-mRNA-1:cds;Parent=Msa0003030-mRNA-1
chr1_1	three_prime_UTR	5469019	5469396	5469019	ID=Msa0003030-mRNA-1:three_prime_utr;Parent=Msa0003030-mRNA-1

Gene Sequence

>Msa0003030

ATGGTTTCCGGATCAGGCATATGCGCTAAGAGAGTCGTGATCGACGCCCGCCACCACATGCTCGGCCGTCTTGCCTCCATTGTCGCAAAGGAGCTTCTCAATGGTCAGAAGGTGGTTCTTGTCAGATGTGAAGAAATTTGTGCTTCAGGTGGTCTTGTTAGACAGAAGATGAAGTATATGAGATTTCTAAGGAAGAGGATGAATACTAAACCTTCTCATGGTCCTATTCACTTTAGGGCTCCCTCTAAGATCTTTTGGCGCACTGTTCGTGGAATGATACCACACAAGACTAAGCGTGGAGAGGCTGCACTCGCGCGATTGAAGGTCTATGAGGGTATTCCTCCTCCATATGACAAGATCAAGAGGATGGTTGTTCCCGATGCTCTCAAGGTGTTGAGACTTCAAAAGGGACACAAATACTGCTTGCTCGGACAGTTGTCATCAGAGGTTGGATGGAACTACGGTGGCATCATCAAGGAGCTGGAGGATAAGAGGAAGGAACGCGCAGGTTTGGCTTACGAGAAAAAGAAGCTGCTCAATAAATTGAGGGCTAAAGCTGAGAAGATTGTAGACGAGAAGCTTGCCCCCCAACTTGAAGTCCTTGCTCCCGTTAAGTACTGA

Protein sequence

>Msa0003030

MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICASGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGEAALARLKVYEGIPPPYDKIKRMVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYGGIIKELEDKRKERAGLAYEKKKLLNKLRAKAEKIVDEKLAPQLEVLAPVKY*