Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583670 | XP_039685750.1 | 96.434 | 701 | 20 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583670 | sp|F4HXL0|PLIP2_ARATH | 57.280 | 728 | 266 | 13 | 1 | 698 | 1 | 713 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0583670 | 0.800754 | 1.242769e-48 | -8.615850e-47 |
| Msa0010770 | Msa0583670 | 0.804851 | 1.771709e-49 | -8.615850e-47 |
| Msa0017320 | Msa0583670 | 0.838258 | 3.200730e-57 | -8.615850e-47 |
| Msa0030480 | Msa0583670 | 0.968405 | 1.246583e-128 | -8.615850e-47 |
| Msa0030530 | Msa0583670 | 0.949294 | 1.700610e-107 | -8.615850e-47 |
| Msa0041690 | Msa0583670 | 0.800366 | 1.490966e-48 | -8.615850e-47 |
| Msa0045550 | Msa0583670 | 0.816006 | 6.908672e-52 | -8.615850e-47 |
| Msa0047640 | Msa0583670 | 0.830507 | 2.824858e-55 | -8.615850e-47 |
| Msa0051740 | Msa0583670 | 0.811816 | 5.793885e-51 | -8.615850e-47 |
| Msa0071480 | Msa0583670 | 0.828020 | 1.134059e-54 | -8.615850e-47 |
| Msa0074750 | Msa0583670 | 0.811213 | 7.832833e-51 | -8.615850e-47 |
| Msa0081650 | Msa0583670 | 0.809267 | 2.058456e-50 | -8.615850e-47 |
| Msa0081940 | Msa0583670 | 0.990607 | 1.916374e-183 | -8.615850e-47 |
| Msa0082050 | Msa0583670 | 0.977738 | 2.199427e-144 | -8.615850e-47 |
| Msa0090510 | Msa0583670 | 0.805427 | 1.342149e-49 | -8.615850e-47 |
| Msa0111080 | Msa0583670 | 0.818600 | 1.800901e-52 | -8.615850e-47 |
| Msa0119440 | Msa0583670 | 0.840591 | 7.927454e-58 | -8.615850e-47 |
| Msa0126880 | Msa0583670 | 0.801718 | 7.887962e-49 | -8.615850e-47 |
| Msa0128430 | Msa0583670 | 0.977130 | 3.613118e-143 | -8.615850e-47 |
| Msa0136630 | Msa0583670 | 0.824674 | 7.103199e-54 | -8.615850e-47 |
| Msa0137510 | Msa0583670 | 0.835634 | 1.496567e-56 | -8.615850e-47 |
| Msa0139670 | Msa0583670 | 0.813698 | 2.244187e-51 | -8.615850e-47 |
| Msa0144430 | Msa0583670 | 0.821022 | 5.035432e-53 | -8.615850e-47 |
| Msa0146080 | Msa0583670 | 0.819323 | 1.233669e-52 | -8.615850e-47 |
| Msa0154920 | Msa0583670 | 0.810155 | 1.326368e-50 | -8.615850e-47 |
| Msa0171980 | Msa0583670 | 0.840151 | 1.033622e-57 | -8.615850e-47 |
| Msa0174000 | Msa0583670 | 0.804893 | 1.736104e-49 | -8.615850e-47 |
| Msa0174260 | Msa0583670 | 0.811008 | 8.678218e-51 | -8.615850e-47 |
| Msa0183420 | Msa0583670 | 0.801076 | 1.067901e-48 | -8.615850e-47 |
| Msa0183910 | Msa0583670 | 0.815242 | 1.022193e-51 | -8.615850e-47 |
| Msa0187490 | Msa0583670 | 0.822796 | 1.955614e-53 | -8.615850e-47 |
| Msa0192640 | Msa0583670 | 0.802382 | 5.761406e-49 | -8.615850e-47 |
| Msa0194010 | Msa0583670 | 0.829928 | 3.912597e-55 | -8.615850e-47 |
| Msa0210260 | Msa0583670 | 0.809815 | 1.570436e-50 | -8.615850e-47 |
| Msa0213430 | Msa0583670 | 0.824128 | 9.546938e-54 | -8.615850e-47 |
| Msa0233370 | Msa0583670 | 0.813291 | 2.757455e-51 | -8.615850e-47 |
| Msa0235880 | Msa0583670 | 0.839541 | 1.489807e-57 | -8.615850e-47 |
| Msa0376600 | Msa0583670 | 0.803527 | 3.341221e-49 | -8.615850e-47 |
| Msa0378010 | Msa0583670 | 0.805007 | 1.643415e-49 | -8.615850e-47 |
| Msa0378970 | Msa0583670 | 0.802970 | 4.357887e-49 | -8.615850e-47 |
| Msa0380600 | Msa0583670 | 0.828062 | 1.107540e-54 | -8.615850e-47 |
| Msa0382310 | Msa0583670 | 0.844955 | 5.484208e-59 | -8.615850e-47 |
| Msa0382370 | Msa0583670 | 0.829847 | 4.093599e-55 | -8.615850e-47 |
| Msa0388650 | Msa0583670 | 0.804395 | 2.205330e-49 | -8.615850e-47 |
| Msa0394690 | Msa0583670 | 0.811554 | 6.606177e-51 | -8.615850e-47 |
| Msa0395980 | Msa0583670 | 0.803000 | 4.294354e-49 | -8.615850e-47 |
| Msa0403490 | Msa0583670 | 0.837047 | 6.545590e-57 | -8.615850e-47 |
| Msa0418400 | Msa0583670 | 0.836312 | 1.007715e-56 | -8.615850e-47 |
| Msa0427580 | Msa0583670 | 0.814656 | 1.378617e-51 | -8.615850e-47 |
| Msa0430060 | Msa0583670 | 0.804870 | 1.755146e-49 | -8.615850e-47 |
| Msa0430240 | Msa0583670 | 0.831352 | 1.752612e-55 | -8.615850e-47 |
| Msa0431210 | Msa0583670 | 0.834083 | 3.680113e-56 | -8.615850e-47 |
| Msa0432160 | Msa0583670 | 0.813489 | 2.494924e-51 | -8.615850e-47 |
| Msa0472710 | Msa0583670 | 0.848471 | 6.001622e-60 | -8.615850e-47 |
| Msa0472720 | Msa0583670 | 0.802344 | 5.865494e-49 | -8.615850e-47 |
| Msa0472770 | Msa0583670 | 0.859240 | 4.742673e-63 | -8.615850e-47 |
| Msa0476680 | Msa0583670 | 0.811266 | 7.628580e-51 | -8.615850e-47 |
| Msa0481970 | Msa0583670 | 0.804156 | 2.473302e-49 | -8.615850e-47 |
| Msa0240270 | Msa0583670 | 0.822937 | 1.813472e-53 | -8.615850e-47 |
| Msa0244970 | Msa0583670 | 0.809181 | 2.148669e-50 | -8.615850e-47 |
| Msa0259440 | Msa0583670 | 0.840251 | 9.731733e-58 | -8.615850e-47 |
| Msa0259580 | Msa0583670 | 0.840821 | 6.903969e-58 | -8.615850e-47 |
| Msa0265600 | Msa0583670 | 0.803730 | 3.031837e-49 | -8.615850e-47 |
| Msa0273650 | Msa0583670 | 0.800212 | 1.602295e-48 | -8.615850e-47 |
| Msa0284240 | Msa0583670 | 0.810928 | 9.032931e-51 | -8.615850e-47 |
| Msa0305620 | Msa0583670 | 0.837915 | 3.921105e-57 | -8.615850e-47 |
| Msa0311720 | Msa0583670 | 0.809638 | 1.713674e-50 | -8.615850e-47 |
| Msa0321690 | Msa0583670 | 0.800746 | 1.247190e-48 | -8.615850e-47 |
| Msa0341230 | Msa0583670 | 0.802185 | 6.325320e-49 | -8.615850e-47 |
| Msa0347990 | Msa0583670 | 0.813288 | 2.761848e-51 | -8.615850e-47 |
| Msa0358110 | Msa0583670 | 0.843645 | 1.233787e-58 | -8.615850e-47 |
| Msa0358120 | Msa0583670 | 0.804457 | 2.140566e-49 | -8.615850e-47 |
| Msa0482940 | Msa0583670 | 0.812972 | 3.239064e-51 | -8.615850e-47 |
| Msa0500400 | Msa0583670 | 0.804082 | 2.562377e-49 | -8.615850e-47 |
| Msa0518170 | Msa0583670 | 0.810913 | 9.099396e-51 | -8.615850e-47 |
| Msa0520270 | Msa0583670 | 0.838736 | 2.408405e-57 | -8.615850e-47 |
| Msa0521010 | Msa0583670 | 0.809616 | 1.733003e-50 | -8.615850e-47 |
| Msa0538160 | Msa0583670 | 0.815435 | 9.256912e-52 | -8.615850e-47 |
| Msa0544730 | Msa0583670 | 0.812017 | 5.238601e-51 | -8.615850e-47 |
| Msa0560500 | Msa0583670 | 0.816973 | 4.194406e-52 | -8.615850e-47 |
| Msa0569780 | Msa0583670 | 0.818224 | 2.191061e-52 | -8.615850e-47 |
| Msa0583670 | Msa0585070 | 0.816276 | 6.012185e-52 | -8.615850e-47 |
| Msa0583670 | Msa0597770 | 0.816667 | 4.914875e-52 | -8.615850e-47 |
| Msa0583670 | Msa0640940 | 0.802910 | 4.482376e-49 | -8.615850e-47 |
| Msa0583670 | Msa0641340 | 0.813098 | 3.039674e-51 | -8.615850e-47 |
| Msa0583670 | Msa0648830 | 0.802152 | 6.424205e-49 | -8.615850e-47 |
| Msa0583670 | Msa0655920 | 0.807655 | 4.546034e-50 | -8.615850e-47 |
| Msa0583670 | Msa0657120 | 0.801055 | 1.078618e-48 | -8.615850e-47 |
| Msa0583670 | Msa0658680 | 0.815152 | 1.070085e-51 | -8.615850e-47 |
| Msa0583670 | Msa0659790 | 0.813065 | 3.090456e-51 | -8.615850e-47 |
| Msa0583670 | Msa0665520 | 0.801329 | 9.478546e-49 | -8.615850e-47 |
| Msa0583670 | Msa0697720 | 0.822723 | 2.033704e-53 | -8.615850e-47 |
| Msa0583670 | Msa0698440 | 0.808271 | 3.361360e-50 | -8.615850e-47 |
| Msa0583670 | Msa0701100 | 0.805338 | 1.400675e-49 | -8.615850e-47 |
| Msa0583670 | Msa0705390 | 0.826524 | 2.587821e-54 | -8.615850e-47 |
| Msa0583670 | Msa0709120 | 0.812430 | 4.256690e-51 | -8.615850e-47 |
| Msa0583670 | Msa0724370 | 0.825921 | 3.601412e-54 | -8.615850e-47 |
| Msa0583670 | Msa0743530 | 0.811135 | 8.144261e-51 | -8.615850e-47 |
| Msa0583670 | Msa0743870 | 0.804016 | 2.644353e-49 | -8.615850e-47 |
| Msa0583670 | Msa0748660 | 0.831087 | 2.036165e-55 | -8.615850e-47 |
| Msa0583670 | Msa0758250 | 0.862299 | 5.589861e-64 | -8.615850e-47 |
| Msa0583670 | Msa0764920 | 0.814097 | 1.832559e-51 | -8.615850e-47 |
| Msa0583670 | Msa0775560 | 0.805536 | 1.272876e-49 | -8.615850e-47 |
| Msa0583670 | Msa0775920 | 0.813359 | 2.663366e-51 | -8.615850e-47 |
| Msa0583670 | Msa0779260 | 0.807443 | 5.042029e-50 | -8.615850e-47 |
| Msa0583670 | Msa0789560 | 0.830016 | 3.723642e-55 | -8.615850e-47 |
| Msa0583670 | Msa0799620 | 0.818142 | 2.287656e-52 | -8.615850e-47 |
| Msa0583670 | Msa0813260 | 0.837015 | 6.668749e-57 | -8.615850e-47 |
| Msa0583670 | Msa0844610 | 0.838005 | 3.718209e-57 | -8.615850e-47 |
| Msa0583670 | Msa0853810 | 0.815573 | 8.627100e-52 | -8.615850e-47 |
| Msa0583670 | Msa0860250 | 0.800277 | 1.553873e-48 | -8.615850e-47 |
| Msa0583670 | Msa0865970 | 0.832680 | 8.232267e-56 | -8.615850e-47 |
| Msa0583670 | Msa0866070 | 0.830634 | 2.630374e-55 | -8.615850e-47 |
| Msa0583670 | Msa0903780 | 0.812448 | 4.217217e-51 | -8.615850e-47 |
| Msa0583670 | Msa0907850 | 0.836530 | 8.865856e-57 | -8.615850e-47 |
| Msa0583670 | Msa0969330 | 0.813047 | 3.118818e-51 | -8.615850e-47 |
| Msa0583670 | Msa0973070 | 0.800928 | 1.144712e-48 | -8.615850e-47 |
| Msa0583670 | Msa0985220 | 0.809594 | 1.752001e-50 | -8.615850e-47 |
| Msa0583670 | Msa1034700 | 0.834148 | 3.543663e-56 | -8.615850e-47 |
| Msa0583670 | Msa1036740 | 0.814271 | 1.677038e-51 | -8.615850e-47 |
| Msa0583670 | Msa1042660 | 0.824974 | 6.036004e-54 | -8.615850e-47 |
| Msa0583670 | Msa1054510 | 0.803610 | 3.211645e-49 | -8.615850e-47 |
| Msa0583670 | Msa1063370 | 0.803601 | 3.224349e-49 | -8.615850e-47 |
| Msa0583670 | Msa1074110 | 0.832579 | 8.723124e-56 | -8.615850e-47 |
| Msa0583670 | Msa1074350 | 0.803344 | 3.645450e-49 | -8.615850e-47 |
| Msa0583670 | Msa1074540 | 0.831073 | 2.052289e-55 | -8.615850e-47 |
| Msa0583670 | Msa1108720 | 0.811908 | 5.532770e-51 | -8.615850e-47 |
| Msa0583670 | Msa1109780 | -0.802640 | 5.098140e-49 | -8.615850e-47 |
| Msa0583670 | Msa1114620 | 0.801963 | 7.025322e-49 | -8.615850e-47 |
| Msa0583670 | Msa1123350 | 0.809318 | 2.007259e-50 | -8.615850e-47 |
| Msa0583670 | Msa1127430 | 0.854274 | 1.372654e-61 | -8.615850e-47 |
| Msa0583670 | Msa1156820 | 0.809168 | 2.162063e-50 | -8.615850e-47 |
| Msa0583670 | Msa1163870 | 0.814162 | 1.772565e-51 | -8.615850e-47 |
| Msa0583670 | Msa1163880 | 0.807600 | 4.669298e-50 | -8.615850e-47 |
| Msa0583670 | Msa1165490 | 0.820356 | 7.162660e-53 | -8.615850e-47 |
| Msa0583670 | Msa1184780 | 0.835980 | 1.223414e-56 | -8.615850e-47 |
| Msa0583670 | Msa1197070 | 0.800881 | 1.170487e-48 | -8.615850e-47 |
| Msa0583670 | Msa1201640 | 0.814138 | 1.794832e-51 | -8.615850e-47 |
| Msa0583670 | Msa1205590 | 0.804063 | 2.585931e-49 | -8.615850e-47 |
| Msa0583670 | Msa1206650 | 0.851912 | 6.514080e-61 | -8.615850e-47 |
| Msa0583670 | Msa1209190 | 0.844974 | 5.422312e-59 | -8.615850e-47 |
| Msa0583670 | Msa1209860 | 0.815351 | 9.664419e-52 | -8.615850e-47 |
| Msa0583670 | Msa1214320 | 0.810296 | 1.236653e-50 | -8.615850e-47 |
| Msa0583670 | Msa1219150 | 0.800155 | 1.645884e-48 | -8.615850e-47 |
| Msa0583670 | Msa1234620 | 0.820188 | 7.828333e-53 | -8.615850e-47 |
| Msa0583670 | Msa1254620 | 0.832762 | 7.855930e-56 | -8.615850e-47 |
| Msa0583670 | Msa1257070 | 0.824642 | 7.228090e-54 | -8.615850e-47 |
| Msa0583670 | Msa1258370 | 0.801632 | 8.216068e-49 | -8.615850e-47 |
| Msa0583670 | Msa1260680 | 0.815606 | 8.480462e-52 | -8.615850e-47 |
| Msa0583670 | Msa1261850 | 0.808274 | 3.356383e-50 | -8.615850e-47 |
| Msa0583670 | Msa1264420 | 0.804277 | 2.333063e-49 | -8.615850e-47 |
| Msa0583670 | Msa1266330 | 0.815918 | 7.226553e-52 | -8.615850e-47 |
| Msa0583670 | Msa1270660 | 0.820749 | 5.819648e-53 | -8.615850e-47 |
| Msa0583670 | Msa1270730 | 0.802682 | 4.997380e-49 | -8.615850e-47 |
| Msa0583670 | Msa1274510 | 0.803505 | 3.376825e-49 | -8.615850e-47 |
| Msa0583670 | Msa1280170 | 0.822393 | 2.426466e-53 | -8.615850e-47 |
| Msa0583670 | Msa1285200 | 0.805118 | 1.557722e-49 | -8.615850e-47 |
| Msa0583670 | Msa1298100 | 0.864520 | 1.145857e-64 | -8.615850e-47 |
| Msa0583670 | Msa1304810 | 0.820986 | 5.132170e-53 | -8.615850e-47 |
| Msa0583670 | Msa1307180 | 0.803062 | 4.170021e-49 | -8.615850e-47 |
| Msa0583670 | Msa1330550 | 0.801391 | 9.206575e-49 | -8.615850e-47 |
| Msa0583670 | Msa1332050 | 0.814048 | 1.878322e-51 | -8.615850e-47 |
| Msa0583670 | Msa1334400 | 0.804072 | 2.574259e-49 | -8.615850e-47 |
| Msa0583670 | Msa1336040 | 0.842377 | 2.684412e-58 | -8.615850e-47 |
| Msa0583670 | Msa1361250 | 0.804535 | 2.061898e-49 | -8.615850e-47 |
| Msa0583670 | Msa1366550 | 0.833639 | 4.750590e-56 | -8.615850e-47 |
| Msa0583670 | Msa1369690 | 0.801527 | 8.631735e-49 | -8.615850e-47 |
| Msa0583670 | Msa1370590 | 0.814305 | 1.648276e-51 | -8.615850e-47 |
| Msa0583670 | Msa1382020 | 0.817297 | 3.547333e-52 | -8.615850e-47 |
| Msa0583670 | Msa1384100 | 0.814718 | 1.335476e-51 | -8.615850e-47 |
| Msa0583670 | Msa1391720 | 0.801560 | 8.499340e-49 | -8.615850e-47 |
| Msa0583670 | Msa1411980 | 0.821479 | 3.950144e-53 | -8.615850e-47 |
| Msa0583670 | Msa1416260 | 0.807539 | 4.810092e-50 | -8.615850e-47 |
| Msa0583670 | Msa1421900 | 0.870623 | 1.269208e-66 | -8.615850e-47 |
| Msa0583670 | Msa1426910 | 0.814404 | 1.567894e-51 | -8.615850e-47 |
| Msa0583670 | Msa1428780 | 0.803947 | 2.733926e-49 | -8.615850e-47 |
| Msa0583670 | Msa1434040 | 0.809980 | 1.447149e-50 | -8.615850e-47 |
| Msa0583670 | Msa1444120 | 0.818773 | 1.645844e-52 | -8.615850e-47 |
| Msa0583670 | Msa1450720 | 0.825101 | 5.630661e-54 | -8.615850e-47 |
| Msa0583670 | Msa1454960 | 0.800622 | 1.322182e-48 | -8.615850e-47 |
| Msa0583670 | Msa1462470 | 0.814728 | 1.329177e-51 | -8.615850e-47 |
| Msa0583670 | Msa1463030 | 0.832888 | 7.309904e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583670 | MtrunA17_Chr1g0194901 | 96.434 | 701 | 20 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1393 |
| Msa0583670 | MtrunA17_Chr7g0269851 | 60.347 | 691 | 188 | 13 | 30 | 683 | 39 | 680 | 0.0 | 756 |
| Msa0583670 | MtrunA17_Chr7g0275571 | 45.796 | 559 | 263 | 10 | 93 | 624 | 122 | 667 | 2.22e-150 | 453 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583670 | AT1G02660.1 | 57.280 | 728 | 266 | 13 | 1 | 698 | 1 | 713 | 0.0 | 747 |
| Msa0583670 | AT3G62590.1 | 50.980 | 714 | 254 | 15 | 1 | 695 | 1 | 637 | 0.0 | 607 |
| Msa0583670 | AT3G61680.2 | 47.664 | 535 | 240 | 6 | 95 | 620 | 122 | 625 | 1.69e-150 | 452 |
| Msa0583670 | AT3G61680.1 | 47.664 | 535 | 240 | 6 | 95 | 620 | 122 | 625 | 1.69e-150 | 452 |
| Msa0583670 | AT3G61680.3 | 47.664 | 535 | 240 | 6 | 95 | 620 | 122 | 625 | 1.69e-150 | 452 |
Find 167 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAATTACCTTGATATT+TGG | 0.154361 | 4_2:-2366808 | None:intergenic |
| AGAAACCCTCCTTAGCATTT+TGG | 0.155210 | 4_2:-2366725 | None:intergenic |
| ATCCTATATCCACCATTATT+TGG | 0.160237 | 4_2:-2367712 | None:intergenic |
| GAGAGATGAATGAATATTTA+AGG | 0.164324 | 4_2:-2366031 | None:intergenic |
| GCAATTACCTCAAATTTAAT+TGG | 0.213954 | 4_2:-2368199 | None:intergenic |
| CCCTGCTAGGATGTTAATAT+TGG | 0.229996 | 4_2:+2369430 | Msa0583670:CDS |
| TACGGATCTGGTTAAGTTCT+TGG | 0.252856 | 4_2:-2369190 | None:intergenic |
| GTCTCTCGACGACGCCGTTT+TGG | 0.268578 | 4_2:+2366450 | Msa0583670:CDS |
| AATGCTAAGGAGGGTTTCTT+TGG | 0.270200 | 4_2:+2366729 | Msa0583670:CDS |
| GATGTCACACTTGGGGAGTT+TGG | 0.270494 | 4_2:+2366774 | Msa0583670:CDS |
| CCTGCTAGGATGTTAATATT+GGG | 0.281713 | 4_2:+2369431 | Msa0583670:CDS |
| CTACTTCCTGTGATAACATT+TGG | 0.282356 | 4_2:+2368542 | Msa0583670:CDS |
| TGCCTTGCGGCAGAAGATTA+TGG | 0.283373 | 4_2:-2368968 | None:intergenic |
| AGGAGGGGCAGAGAGAGAAT+TGG | 0.296623 | 4_2:+2366518 | Msa0583670:CDS |
| CAGGAAGAGAGTCCTTAAAA+AGG | 0.312198 | 4_2:+2369354 | Msa0583670:CDS |
| TCCACCATTATTTGGCTCCT+TGG | 0.317715 | 4_2:-2367704 | None:intergenic |
| TTTAGGTGAGCATGAACTTC+TGG | 0.322356 | 4_2:-2368407 | None:intergenic |
| TTAAGTGACCGATCTGCTTA+TGG | 0.329267 | 4_2:+2369098 | Msa0583670:CDS |
| CATTTCATATCATTCATCTA+AGG | 0.331288 | 4_2:-2369472 | None:intergenic |
| CTTGGTGAAAATTTCTCATC+TGG | 0.344080 | 4_2:-2368945 | None:intergenic |
| CTTGATATTTGGTATAGAAT+AGG | 0.352328 | 4_2:-2366797 | None:intergenic |
| GATACCCATTGGAATCTCTA+TGG | 0.358600 | 4_2:+2366395 | Msa0583670:CDS |
| GGAGGGGCAGAGAGAGAATT+GGG | 0.360798 | 4_2:+2366519 | Msa0583670:CDS |
| CATGTCATGATCTCTTTGTA+TGG | 0.368198 | 4_2:-2369132 | None:intergenic |
| AGCTTCTTGTCCGTGTCATT+AGG | 0.369839 | 4_2:-2369026 | None:intergenic |
| CTCGCATCGATTTACGGATC+TGG | 0.403958 | 4_2:-2369202 | None:intergenic |
| CGCAGAAGTGGCATCTTTGA+TGG | 0.405975 | 4_2:+2367870 | Msa0583670:CDS |
| CGTGCAACTTTCCGTTTCAC+TGG | 0.411226 | 4_2:+2368443 | Msa0583670:CDS |
| CGTTTCACTGGACATTCCCT+TGG | 0.413018 | 4_2:+2368455 | Msa0583670:CDS |
| CAACGCCAGTCACCGTTCTC+TGG | 0.414357 | 4_2:+2369320 | Msa0583670:CDS |
| GACCGATCTGCTTATGGATC+TGG | 0.419315 | 4_2:+2369104 | Msa0583670:CDS |
| AGAGATGAATGAATATTTAA+GGG | 0.430756 | 4_2:-2366030 | None:intergenic |
| CCCAATATTAACATCCTAGC+AGG | 0.442858 | 4_2:-2369431 | None:intergenic |
| TGAATGAATATTTAAGGGTA+TGG | 0.446357 | 4_2:-2366025 | None:intergenic |
| TTGATACCAGCATTGTTGTT+GGG | 0.446372 | 4_2:+2369270 | Msa0583670:CDS |
| TTCACGACCCACCGCACTTA+CGG | 0.447728 | 4_2:-2366332 | None:intergenic |
| ACATTCCCTTGGTGGAAGCT+TGG | 0.448070 | 4_2:+2368466 | Msa0583670:CDS |
| GACAGCAGTGGTTGCGGCAA+AGG | 0.448188 | 4_2:+2367909 | Msa0583670:CDS |
| ATTGTTCCTTCGATCTCCAT+TGG | 0.450078 | 4_2:+2366268 | Msa0583670:CDS |
| TTCACTGGACATTCCCTTGG+TGG | 0.452430 | 4_2:+2368458 | Msa0583670:CDS |
| GAAACCAAGGAGCCAAATAA+TGG | 0.453919 | 4_2:+2367700 | Msa0583670:CDS |
| GGGAAACTCTTAAAACATTA+CGG | 0.455788 | 4_2:+2367583 | Msa0583670:CDS |
| GTTCGGAGTCATTAGCATCT+TGG | 0.455806 | 4_2:+2368155 | Msa0583670:CDS |
| GTTCAAGAACGTCAACTTTG+CGG | 0.456069 | 4_2:-2369054 | None:intergenic |
| CCTGCACGTGGCTTCGCGGC+AGG | 0.457427 | 4_2:-2368613 | None:intergenic |
| CACATGGTTAGCTGAATGTT+AGG | 0.465272 | 4_2:+2369542 | Msa0583670:three_prime_UTR |
| TTCTCTGTTATCTTCCAAAA+CGG | 0.471419 | 4_2:-2366464 | None:intergenic |
| AAGAATATTCCTCTACAAGC+AGG | 0.475927 | 4_2:-2369614 | None:intergenic |
| GTTCCTTCGATCTCCATTGG+TGG | 0.483103 | 4_2:+2366271 | Msa0583670:CDS |
| ACACAAATAAATGCATGTGT+TGG | 0.484143 | 4_2:-2369397 | None:intergenic |
| CGCATCTACCGTAAGTGCGG+TGG | 0.485121 | 4_2:+2366324 | Msa0583670:CDS |
| TGTTGGGAGGTCCATGGTAT+CGG | 0.485167 | 4_2:+2369286 | Msa0583670:CDS |
| AAGGGTATGGAACCTAAAAC+AGG | 0.491510 | 4_2:-2366012 | None:intergenic |
| ACTTCTTCAAATGCAGCGGC+TGG | 0.497103 | 4_2:+2367814 | Msa0583670:CDS |
| AGCCAAATAATGGTGGATAT+AGG | 0.497389 | 4_2:+2367710 | Msa0583670:CDS |
| CTTAATATCTCAAGTGGATG+AGG | 0.501462 | 4_2:-2369080 | None:intergenic |
| GTTGATACCAGCATTGTTGT+TGG | 0.504284 | 4_2:+2369269 | Msa0583670:CDS |
| ATTGCCTGCACGTGGCTTCG+CGG | 0.504752 | 4_2:-2368617 | None:intergenic |
| CCTGCCGCGAAGCCACGTGC+AGG | 0.508181 | 4_2:+2368613 | Msa0583670:CDS |
| GTATATATGAGGCTGCTAAA+GGG | 0.510063 | 4_2:+2368366 | Msa0583670:CDS |
| CACAAATAAATGCATGTGTT+GGG | 0.510490 | 4_2:-2369396 | None:intergenic |
| TTCAGTGACAGCAGTGGTTG+CGG | 0.512338 | 4_2:+2367903 | Msa0583670:CDS |
| CTCGTTCGTCACCTTGCGAA+TGG | 0.517823 | 4_2:+2367971 | Msa0583670:CDS |
| GGTATATATGAGGCTGCTAA+AGG | 0.517913 | 4_2:+2368365 | Msa0583670:CDS |
| CATTGTTGTTGGGAGGTCCA+TGG | 0.518484 | 4_2:+2369280 | Msa0583670:CDS |
| CAAGGGAATGTCCAGTGAAA+CGG | 0.522758 | 4_2:-2368454 | None:intergenic |
| CTATTCTATACCAAATATCA+AGG | 0.525327 | 4_2:+2366798 | Msa0583670:CDS |
| AATGTTTGGAAAGGGGAACA+AGG | 0.528089 | 4_2:+2366565 | Msa0583670:CDS |
| AAAATCTGAGAAAATTCCTC+AGG | 0.530787 | 4_2:+2367651 | Msa0583670:CDS |
| AATCTTCTGCCGCAAGGCAG+TGG | 0.532114 | 4_2:+2368972 | Msa0583670:CDS |
| AAGCTACTATACACACCAAT+GGG | 0.534284 | 4_2:+2368903 | Msa0583670:CDS |
| CTCCTCACCGTCATCTCTAA+CGG | 0.535095 | 4_2:-2366500 | None:intergenic |
| CATATATACCTCTGTGCACA+AGG | 0.536219 | 4_2:-2368352 | None:intergenic |
| TTATGCCAGAGAACGGTGAC+TGG | 0.536435 | 4_2:-2369325 | None:intergenic |
| TCAAATGCAGCGGCTGGTGA+AGG | 0.538184 | 4_2:+2367820 | Msa0583670:CDS |
| CTTCTGCGTTCATCATGTCA+AGG | 0.540763 | 4_2:-2367855 | None:intergenic |
| TTCTCTGGCATAATGAAGAC+AGG | 0.544083 | 4_2:+2369335 | Msa0583670:CDS |
| AGAACGTCAACTTTGCGGCT+CGG | 0.546820 | 4_2:-2369049 | None:intergenic |
| AGAATCAGCAATTCACCCAT+TGG | 0.548209 | 4_2:-2368918 | None:intergenic |
| CTGCTAGGATGTTAATATTG+GGG | 0.549191 | 4_2:+2369432 | Msa0583670:CDS |
| GGTTCCCCTTCCATCATGTG+TGG | 0.551578 | 4_2:+2368563 | Msa0583670:CDS |
| CGCCTCCACACATGATGGAA+GGG | 0.552230 | 4_2:-2368568 | None:intergenic |
| ATGTGAAGAATGTTTGGAAA+GGG | 0.553617 | 4_2:+2366557 | Msa0583670:CDS |
| TGCGGCAGAAGATTATGGCT+TGG | 0.555573 | 4_2:-2368963 | None:intergenic |
| CGGTCACTTAATATCTCAAG+TGG | 0.555750 | 4_2:-2369086 | None:intergenic |
| CTCACCGTCATCTCTAACGG+TGG | 0.557455 | 4_2:-2366497 | None:intergenic |
| AGCAGTGGTTGCGGCAAAGG+AGG | 0.558429 | 4_2:+2367912 | Msa0583670:CDS |
| GGCAAAGGAGGAAGTAAAGC+AGG | 0.560431 | 4_2:+2367924 | Msa0583670:CDS |
| GGACCTCCCAACAACAATGC+TGG | 0.562296 | 4_2:-2369276 | None:intergenic |
| GCTGCATTTGAAGAAGTGAA+TGG | 0.563038 | 4_2:-2367808 | None:intergenic |
| CATGTGAAGAATGTTTGGAA+AGG | 0.563671 | 4_2:+2366556 | Msa0583670:CDS |
| GTTAGAGATGACGGTGAGGA+GGG | 0.565035 | 4_2:+2366502 | Msa0583670:CDS |
| ATACCAGCATTGTTGTTGGG+AGG | 0.566961 | 4_2:+2369273 | Msa0583670:CDS |
| GTATGCTCAGATGTCACACT+TGG | 0.567630 | 4_2:+2366765 | Msa0583670:CDS |
| CAGAGAACGGTGACTGGCGT+TGG | 0.568268 | 4_2:-2369319 | None:intergenic |
| TGACATGATGAACGCAGAAG+TGG | 0.568983 | 4_2:+2367858 | Msa0583670:CDS |
| CTCAAGAACCCTGCTTGTAG+AGG | 0.569073 | 4_2:+2369605 | Msa0583670:three_prime_UTR |
| CGATCTGCTTATGGATCTGG+AGG | 0.572142 | 4_2:+2369107 | Msa0583670:CDS |
| TTTACTTGGTTATTGAGACA+TGG | 0.572898 | 4_2:-2368740 | None:intergenic |
| TTACTTGGTTATTGAGACAT+GGG | 0.574179 | 4_2:-2368739 | None:intergenic |
| TCTTTACTTTCGACTTCCTG+AGG | 0.574252 | 4_2:-2367667 | None:intergenic |
| CAAGGGAATCATGAAAGAGA+AGG | 0.574584 | 4_2:+2366583 | Msa0583670:CDS |
| CGACGGAACAGAACGTTCAG+TGG | 0.580188 | 4_2:+2366424 | Msa0583670:CDS |
| AGAGAAGCAAGAAGAAACCA+AGG | 0.581266 | 4_2:+2367687 | Msa0583670:CDS |
| TCGCCTCCACACATGATGGA+AGG | 0.582366 | 4_2:-2368569 | None:intergenic |
| TCCATGGTATCGGTCAGTAT+CGG | 0.583827 | 4_2:+2369296 | Msa0583670:CDS |
| GGGGAACCAAATGTTATCAC+AGG | 0.584190 | 4_2:-2368548 | None:intergenic |
| CGTTAGAGATGACGGTGAGG+AGG | 0.587487 | 4_2:+2366501 | Msa0583670:CDS |
| GCCGATACTGACCGATACCA+TGG | 0.588719 | 4_2:-2369297 | None:intergenic |
| GAGAGAAAAGACGCAAGGTA+TGG | 0.588772 | 4_2:+2369222 | Msa0583670:CDS |
| GTGTATAAAACAAGGGCACA+TGG | 0.588841 | 4_2:+2369526 | Msa0583670:three_prime_UTR |
| GCATTATAATTGCCTGCACG+TGG | 0.590797 | 4_2:-2368625 | None:intergenic |
| GAAGCTACTATACACACCAA+TGG | 0.592530 | 4_2:+2368902 | Msa0583670:intron |
| TAGTGCCAAGCTTCCACCAA+GGG | 0.594028 | 4_2:-2368471 | None:intergenic |
| TGTGCACAGAGGTATATATG+AGG | 0.594337 | 4_2:+2368355 | Msa0583670:CDS |
| GACACTCTACTTGAAAAGCT+TGG | 0.594758 | 4_2:+2368590 | Msa0583670:CDS |
| CTCCAGATCCATAAGCAGAT+CGG | 0.594796 | 4_2:-2369106 | None:intergenic |
| AGCCATAATCTTCTGCCGCA+AGG | 0.595034 | 4_2:+2368966 | Msa0583670:CDS |
| AACGTTCTGTTCCGTCGTTG+TGG | 0.595293 | 4_2:-2366418 | None:intergenic |
| ATGTTTGGAAAGGGGAACAA+GGG | 0.596462 | 4_2:+2366566 | Msa0583670:CDS |
| TATGCTCAGATGTCACACTT+GGG | 0.597591 | 4_2:+2366766 | Msa0583670:CDS |
| ACAGGAAGTAGAGAGGTGAT+TGG | 0.597627 | 4_2:-2368530 | None:intergenic |
| AGTGTCGCCTCCACACATGA+TGG | 0.598823 | 4_2:-2368573 | None:intergenic |
| AGAAAAGACGCAAGGTATGG+TGG | 0.599163 | 4_2:+2369225 | Msa0583670:CDS |
| GCCTCCACACATGATGGAAG+GGG | 0.599219 | 4_2:-2368567 | None:intergenic |
| GTGGCCATAGAGATTCCAAT+GGG | 0.600305 | 4_2:-2366399 | None:intergenic |
| TCCCCTTCCATCATGTGTGG+AGG | 0.601542 | 4_2:+2368566 | Msa0583670:CDS |
| GTCTTCATTATGCCAGAGAA+CGG | 0.604223 | 4_2:-2369332 | None:intergenic |
| CGCACTTACGGTAGATGCGG+TGG | 0.605825 | 4_2:-2366320 | None:intergenic |
| TGCTAGGATGTTAATATTGG+GGG | 0.605936 | 4_2:+2369433 | Msa0583670:CDS |
| ACCAAGGAGCCAAATAATGG+TGG | 0.606415 | 4_2:+2367703 | Msa0583670:CDS |
| ATTCACTTCTTCAAATGCAG+CGG | 0.610395 | 4_2:+2367810 | Msa0583670:CDS |
| GCATCTACCGTAAGTGCGGT+GGG | 0.614606 | 4_2:+2366325 | Msa0583670:CDS |
| GTGCAGATAAGATGCAGCAG+AGG | 0.621656 | 4_2:-2367764 | None:intergenic |
| AAAACCACCGTTAGAGATGA+CGG | 0.627979 | 4_2:+2366493 | Msa0583670:CDS |
| GATCCACCAATGGAGATCGA+AGG | 0.628096 | 4_2:-2366274 | None:intergenic |
| TTAGAGATGACGGTGAGGAG+GGG | 0.629402 | 4_2:+2366503 | Msa0583670:CDS |
| ACTCGTCGCGGTAGTACAAG+AGG | 0.630459 | 4_2:-2369248 | None:intergenic |
| AATCTCTATGGCCACAACGA+CGG | 0.633455 | 4_2:+2366407 | Msa0583670:CDS |
| TGTGGCCATAGAGATTCCAA+TGG | 0.646166 | 4_2:-2366400 | None:intergenic |
| AGGGAAAAGTGTATAAAACA+AGG | 0.646888 | 4_2:+2369518 | Msa0583670:three_prime_UTR |
| TCGCAGATGAACCATTCGCA+AGG | 0.648265 | 4_2:-2367982 | None:intergenic |
| CACCGCATCTACCGTAAGTG+CGG | 0.649836 | 4_2:+2366321 | Msa0583670:CDS |
| TGTATCTAAAGATCCACCAA+TGG | 0.652056 | 4_2:-2366284 | None:intergenic |
| ATGCTCAGATGTCACACTTG+GGG | 0.652908 | 4_2:+2366767 | Msa0583670:CDS |
| AGAATATTCCTCTACAAGCA+GGG | 0.654837 | 4_2:-2369613 | None:intergenic |
| TGGATATAGGATAAGTGCAA+CGG | 0.659737 | 4_2:+2367723 | Msa0583670:CDS |
| CACCGCACTTACGGTAGATG+CGG | 0.662356 | 4_2:-2366323 | None:intergenic |
| TTGGATGTCCTTGTGCACAG+AGG | 0.663273 | 4_2:+2368344 | Msa0583670:CDS |
| AGATATAGACCACTGCCTTG+CGG | 0.663361 | 4_2:-2368981 | None:intergenic |
| CCAATATTAACATCCTAGCA+GGG | 0.667471 | 4_2:-2369430 | None:intergenic |
| GTGTCATTAGGTTCTGACAA+AGG | 0.671563 | 4_2:-2369014 | None:intergenic |
| CATGCTCACCTAAAATCTCG+AGG | 0.672833 | 4_2:+2368416 | Msa0583670:CDS |
| TACTGATTCAGTGACAGCAG+TGG | 0.675088 | 4_2:+2367897 | Msa0583670:CDS |
| GATGCGAGAGAAAAGACGCA+AGG | 0.678863 | 4_2:+2369217 | Msa0583670:CDS |
| TGTTATCACAGGAAGTAGAG+AGG | 0.682469 | 4_2:-2368537 | None:intergenic |
| TTTGTCAGAACCTAATGACA+CGG | 0.688799 | 4_2:+2369016 | Msa0583670:CDS |
| GGGAAAAGTGTATAAAACAA+GGG | 0.692115 | 4_2:+2369519 | Msa0583670:three_prime_UTR |
| TGTGAAGAATGTTTGGAAAG+GGG | 0.703391 | 4_2:+2366558 | Msa0583670:CDS |
| ATGTTGTTGTTACGTTACGC+AGG | 0.703792 | 4_2:-2366133 | None:intergenic |
| CACCGTTAGAGATGACGGTG+AGG | 0.714990 | 4_2:+2366498 | Msa0583670:CDS |
| GTAGTGCCAAGCTTCCACCA+AGG | 0.715098 | 4_2:-2368472 | None:intergenic |
| TCAAGTTTGTGATACTTGCG+CGG | 0.721242 | 4_2:+2366645 | Msa0583670:CDS |
| ATCTGCGATGATAACCAGAG+TGG | 0.733794 | 4_2:+2367997 | Msa0583670:CDS |
| TAATTGCAAGAAAATGCTCG+CGG | 0.749108 | 4_2:-2368662 | None:intergenic |
| ATGCTGGTATCAACTCGTCG+CGG | 0.755961 | 4_2:-2369260 | None:intergenic |
| GCTGAGAATGATGAAAACAA+CGG | 0.787436 | 4_2:+2366613 | Msa0583670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTCTTTTCTTTGTTTT+CGG | - | chr4_2:2366216-2366235 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTTTGGATCATT+CGG | + | chr4_2:2366875-2366894 | Msa0583670:intron | 15.0% |
| !! | TAAAATTAAAAGACAAACTT+TGG | - | chr4_2:2367090-2367109 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACATAAACTTTT+TGG | - | chr4_2:2368785-2368804 | None:intergenic | 15.0% |
| !!! | TATGTTTTTTCTTTATTGAT+AGG | + | chr4_2:2368792-2368811 | Msa0583670:intron | 15.0% |
| !!! | ATTCATATTTTTTATTACGA+GGG | + | chr4_2:2369495-2369514 | Msa0583670:three_prime_UTR | 15.0% |
| !! | AGAGATGAATGAATATTTAA+GGG | - | chr4_2:2366033-2366052 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGTTTTGATTTGA+TGG | - | chr4_2:2366108-2366127 | None:intergenic | 20.0% |
| !! | AAACTATGTGTTTAAAAACT+GGG | + | chr4_2:2366245-2366264 | Msa0583670:CDS | 20.0% |
| !! | AAACAAATTACCTTGATATT+TGG | - | chr4_2:2366811-2366830 | None:intergenic | 20.0% |
| !!! | GCTTTATGGTTTTTAAATTT+TGG | + | chr4_2:2366866-2366885 | Msa0583670:intron | 20.0% |
| !!! | TATTTTGTTTTTATGTGATC+TGG | + | chr4_2:2366981-2367000 | Msa0583670:intron | 20.0% |
| !!! | TTTGTCTTTTAATTTTAGCA+TGG | + | chr4_2:2367093-2367112 | Msa0583670:intron | 20.0% |
| !!! | TACAAGATTTTTTGTTATTC+AGG | + | chr4_2:2368020-2368039 | Msa0583670:CDS | 20.0% |
| !!! | GATTCATATTTTTTATTACG+AGG | + | chr4_2:2369494-2369513 | Msa0583670:three_prime_UTR | 20.0% |
| ! | TGAATGAATATTTAAGGGTA+TGG | - | chr4_2:2366028-2366047 | None:intergenic | 25.0% |
| ! | GAGAGATGAATGAATATTTA+AGG | - | chr4_2:2366034-2366053 | None:intergenic | 25.0% |
| !! | AAGAAAAGAAAAAAGCACAA+TGG | + | chr4_2:2366222-2366241 | Msa0583670:exon | 25.0% |
| ! | GAAACTATGTGTTTAAAAAC+TGG | + | chr4_2:2366244-2366263 | Msa0583670:CDS | 25.0% |
| !! | GAAAACAATGATTTTTGTGA+AGG | - | chr4_2:2366361-2366380 | None:intergenic | 25.0% |
| !! | ATTTTCATTTAGATACCCAT+TGG | + | chr4_2:2366384-2366403 | Msa0583670:CDS | 25.0% |
| ! | CTTGATATTTGGTATAGAAT+AGG | - | chr4_2:2366800-2366819 | None:intergenic | 25.0% |
| ! | CTATTCTATACCAAATATCA+AGG | + | chr4_2:2366798-2366817 | Msa0583670:CDS | 25.0% |
| !!! | TTGTTTTTACTTGTGCTTTA+TGG | + | chr4_2:2366852-2366871 | Msa0583670:intron | 25.0% |
| !!! | TTTTAGTTGATTCTTAGAGA+TGG | + | chr4_2:2366914-2366933 | Msa0583670:intron | 25.0% |
| ! | GTTTGTAAATTGTTCATTCA+TGG | + | chr4_2:2366940-2366959 | Msa0583670:intron | 25.0% |
| ! | ATCTTCAACTAATCAATGTT+TGG | - | chr4_2:2367017-2367036 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAACAAATCA+AGG | - | chr4_2:2367041-2367060 | None:intergenic | 25.0% |
| !!! | TGATTTGTTTCTTTCTTTCT+TGG | + | chr4_2:2367041-2367060 | Msa0583670:intron | 25.0% |
| !!! | TATGGATTGGTGTATTTATA+AGG | + | chr4_2:2367204-2367223 | Msa0583670:intron | 25.0% |
| !! | CTATAATCTGAATCTTTTGT+TGG | + | chr4_2:2367281-2367300 | Msa0583670:intron | 25.0% |
| !!! | AGTGTGATTTTTTACAACTA+TGG | + | chr4_2:2367385-2367404 | Msa0583670:intron | 25.0% |
| ! | TGGAAATCAGAACATATAAT+AGG | - | chr4_2:2367513-2367532 | None:intergenic | 25.0% |
| !! | TTAGTTTCATATGCATTTTG+TGG | - | chr4_2:2367533-2367552 | None:intergenic | 25.0% |
| ! | TGAAATTTGATTATTTAGCC+AGG | + | chr4_2:2367562-2367581 | Msa0583670:intron | 25.0% |
| ! | GAAATTTGATTATTTAGCCA+GGG | + | chr4_2:2367563-2367582 | Msa0583670:intron | 25.0% |
| !!! | AGATTTTTTGTTATTCAGGT+AGG | + | chr4_2:2368024-2368043 | Msa0583670:intron | 25.0% |
| !!! | GATTTTTTGTTATTCAGGTA+GGG | + | chr4_2:2368025-2368044 | Msa0583670:intron | 25.0% |
| !!! | ATTTTTTGTTATTCAGGTAG+GGG | + | chr4_2:2368026-2368045 | Msa0583670:intron | 25.0% |
| !! | TTGATAAAGCGTTATTATGT+AGG | + | chr4_2:2368132-2368151 | Msa0583670:intron | 25.0% |
| !! | TGATAAAGCGTTATTATGTA+GGG | + | chr4_2:2368133-2368152 | Msa0583670:intron | 25.0% |
| !! | ATTTAATTGGCTCAAAAAGT+AGG | - | chr4_2:2368189-2368208 | None:intergenic | 25.0% |
| !! | TTTTGAGCCAATTAAATTTG+AGG | + | chr4_2:2368192-2368211 | Msa0583670:CDS | 25.0% |
| ! | GCAATTACCTCAAATTTAAT+TGG | - | chr4_2:2368202-2368221 | None:intergenic | 25.0% |
| !!! | TACACATTTTTTTTTACCCA+GGG | + | chr4_2:2368320-2368339 | Msa0583670:intron | 25.0% |
| ! | CATTTCATATCATTCATCTA+AGG | - | chr4_2:2369475-2369494 | None:intergenic | 25.0% |
| !!! | ATATTTTTTATTACGAGGGA+GGG | + | chr4_2:2369499-2369518 | Msa0583670:three_prime_UTR | 25.0% |
| ! | AAAATTCGTTCACCTGTTTT+AGG | + | chr4_2:2366000-2366019 | Msa0583670:five_prime_UTR | 30.0% |
| TTCTCTGTTATCTTCCAAAA+CGG | - | chr4_2:2366467-2366486 | None:intergenic | 30.0% | |
| ! | TTTTGCATGTGAAGAATGTT+TGG | + | chr4_2:2366551-2366570 | Msa0583670:CDS | 30.0% |
| ATGTGAAGAATGTTTGGAAA+GGG | + | chr4_2:2366557-2366576 | Msa0583670:CDS | 30.0% | |
| ! | ACTCATTTTCCAAAATGCTA+AGG | + | chr4_2:2366716-2366735 | Msa0583670:CDS | 30.0% |
| ! | ATTTTCCAAAATGCTAAGGA+GGG | + | chr4_2:2366720-2366739 | Msa0583670:CDS | 30.0% |
| ! | TTGTTCATTCATGGTTTTTG+AGG | + | chr4_2:2366949-2366968 | Msa0583670:intron | 30.0% |
| ATTTACCATGTGTTGGATTA+TGG | + | chr4_2:2367186-2367205 | Msa0583670:intron | 30.0% | |
| !!! | AAGGTTTTAATTCATAACCC+TGG | + | chr4_2:2367223-2367242 | Msa0583670:intron | 30.0% |
| !!! | AGGTTTTAATTCATAACCCT+GGG | + | chr4_2:2367224-2367243 | Msa0583670:intron | 30.0% |
| TATGTTAGGTGATTGATCTT+TGG | + | chr4_2:2367421-2367440 | Msa0583670:intron | 30.0% | |
| ! | GCATTTTTGCGATTGAAATT+TGG | + | chr4_2:2367458-2367477 | Msa0583670:intron | 30.0% |
| !!! | TAATGTTTTAAGAGTTTCCC+TGG | - | chr4_2:2367583-2367602 | None:intergenic | 30.0% |
| GGGAAACTCTTAAAACATTA+CGG | + | chr4_2:2367583-2367602 | Msa0583670:CDS | 30.0% | |
| ATCGCTAGAGAAAAAAGAAT+TGG | + | chr4_2:2367624-2367643 | Msa0583670:CDS | 30.0% | |
| AAAATCTGAGAAAATTCCTC+AGG | + | chr4_2:2367651-2367670 | Msa0583670:CDS | 30.0% | |
| ATCCTATATCCACCATTATT+TGG | - | chr4_2:2367715-2367734 | None:intergenic | 30.0% | |
| !!! | GTACACATTTTTTTTTACCC+AGG | + | chr4_2:2368319-2368338 | Msa0583670:intron | 30.0% |
| !!! | ATTTTTTTTTACCCAGGGTT+TGG | + | chr4_2:2368325-2368344 | Msa0583670:intron | 30.0% |
| !!! | CCTTTAAGATTTTTGCAACA+TGG | - | chr4_2:2368694-2368713 | None:intergenic | 30.0% |
| CCATGTTGCAAAAATCTTAA+AGG | + | chr4_2:2368691-2368710 | Msa0583670:CDS | 30.0% | |
| TTACTTGGTTATTGAGACAT+GGG | - | chr4_2:2368742-2368761 | None:intergenic | 30.0% | |
| TTTACTTGGTTATTGAGACA+TGG | - | chr4_2:2368743-2368762 | None:intergenic | 30.0% | |
| ! | CATAAACTTTTTGGATAAGC+AGG | - | chr4_2:2368776-2368795 | None:intergenic | 30.0% |
| CACAAATAAATGCATGTGTT+GGG | - | chr4_2:2369399-2369418 | None:intergenic | 30.0% | |
| ACACAAATAAATGCATGTGT+TGG | - | chr4_2:2369400-2369419 | None:intergenic | 30.0% | |
| !!! | CATATTTTTTATTACGAGGG+AGG | + | chr4_2:2369498-2369517 | Msa0583670:three_prime_UTR | 30.0% |
| ! | AGGGAAAAGTGTATAAAACA+AGG | + | chr4_2:2369518-2369537 | Msa0583670:three_prime_UTR | 30.0% |
| ! | GGGAAAAGTGTATAAAACAA+GGG | + | chr4_2:2369519-2369538 | Msa0583670:three_prime_UTR | 30.0% |
| TGTATCTAAAGATCCACCAA+TGG | - | chr4_2:2366287-2366306 | None:intergenic | 35.0% | |
| CATGTGAAGAATGTTTGGAA+AGG | + | chr4_2:2366556-2366575 | Msa0583670:CDS | 35.0% | |
| TGTGAAGAATGTTTGGAAAG+GGG | + | chr4_2:2366558-2366577 | Msa0583670:CDS | 35.0% | |
| GCTGAGAATGATGAAAACAA+CGG | + | chr4_2:2366613-2366632 | Msa0583670:CDS | 35.0% | |
| ! | CATTTTCCAAAATGCTAAGG+AGG | + | chr4_2:2366719-2366738 | Msa0583670:CDS | 35.0% |
| ! | TCTTTCTTTCTTGGCTTGAA+TGG | + | chr4_2:2367050-2367069 | Msa0583670:intron | 35.0% |
| ! | CTTTCTTTCTTGGCTTGAAT+GGG | + | chr4_2:2367051-2367070 | Msa0583670:intron | 35.0% |
| ! | TTTCTTTCTTGGCTTGAATG+GGG | + | chr4_2:2367052-2367071 | Msa0583670:intron | 35.0% |
| ! | GCATTTTGCCGTTATATCAA+AGG | + | chr4_2:2367149-2367168 | Msa0583670:intron | 35.0% |
| ACCGCAAACCTTTGATATAA+CGG | - | chr4_2:2367160-2367179 | None:intergenic | 35.0% | |
| TTTAATTCATAACCCTGGGT+AGG | + | chr4_2:2367228-2367247 | Msa0583670:intron | 35.0% | |
| TTAATTCATAACCCTGGGTA+GGG | + | chr4_2:2367229-2367248 | Msa0583670:intron | 35.0% | |
| CTTAAACTTGTCGAGACAAT+GGG | + | chr4_2:2367257-2367276 | Msa0583670:intron | 35.0% | |
| TTAAACTTGTCGAGACAATG+GGG | + | chr4_2:2367258-2367277 | Msa0583670:intron | 35.0% | |
| ! | GTTTTATCCAAAGCTAAACG+AGG | - | chr4_2:2367345-2367364 | None:intergenic | 35.0% |
| GAATGCTCATTGCTTATGTT+AGG | + | chr4_2:2367407-2367426 | Msa0583670:intron | 35.0% | |
| !! | AGCCAAATAATGGTGGATAT+AGG | + | chr4_2:2367710-2367729 | Msa0583670:CDS | 35.0% |
| TGGATATAGGATAAGTGCAA+CGG | + | chr4_2:2367723-2367742 | Msa0583670:CDS | 35.0% | |
| ATTCACTTCTTCAAATGCAG+CGG | + | chr4_2:2367810-2367829 | Msa0583670:CDS | 35.0% | |
| CAAAAAATCTTGTACCACTC+TGG | - | chr4_2:2368014-2368033 | None:intergenic | 35.0% | |
| AAGCGTTATTATGTAGGGTT+CGG | + | chr4_2:2368138-2368157 | Msa0583670:intron | 35.0% | |
| TTGCTGATATTGCAGACTAT+AGG | + | chr4_2:2368218-2368237 | Msa0583670:intron | 35.0% | |
| ! | TTTTTCGTCACTATTGTCGA+AGG | + | chr4_2:2368242-2368261 | Msa0583670:intron | 35.0% |
| ! | TTTTCGTCACTATTGTCGAA+GGG | + | chr4_2:2368243-2368262 | Msa0583670:intron | 35.0% |
| GTATATATGAGGCTGCTAAA+GGG | + | chr4_2:2368366-2368385 | Msa0583670:CDS | 35.0% | |
| CTACTTCCTGTGATAACATT+TGG | + | chr4_2:2368542-2368561 | Msa0583670:CDS | 35.0% | |
| TAATTGCAAGAAAATGCTCG+CGG | - | chr4_2:2368665-2368684 | None:intergenic | 35.0% | |
| ! | AGATTTTTGCAACATGGTCA+GGG | - | chr4_2:2368688-2368707 | None:intergenic | 35.0% |
| ! | AAGATTTTTGCAACATGGTC+AGG | - | chr4_2:2368689-2368708 | None:intergenic | 35.0% |
| AAGCTACTATACACACCAAT+GGG | + | chr4_2:2368903-2368922 | Msa0583670:CDS | 35.0% | |
| CTTGGTGAAAATTTCTCATC+TGG | - | chr4_2:2368948-2368967 | None:intergenic | 35.0% | |
| TTTGTCAGAACCTAATGACA+CGG | + | chr4_2:2369016-2369035 | Msa0583670:CDS | 35.0% | |
| CTTAATATCTCAAGTGGATG+AGG | - | chr4_2:2369083-2369102 | None:intergenic | 35.0% | |
| CATGTCATGATCTCTTTGTA+TGG | - | chr4_2:2369135-2369154 | None:intergenic | 35.0% | |
| !!! | TTTTCTCTCGCATCGATTTA+CGG | - | chr4_2:2369211-2369230 | None:intergenic | 35.0% |
| ! | TTGATACCAGCATTGTTGTT+GGG | + | chr4_2:2369270-2369289 | Msa0583670:CDS | 35.0% |
| AGTCCTTAAAAAGGTTTAGC+AGG | + | chr4_2:2369363-2369382 | Msa0583670:CDS | 35.0% | |
| ! | AAGCCTGCTAAACCTTTTTA+AGG | - | chr4_2:2369369-2369388 | None:intergenic | 35.0% |
| CCAATATTAACATCCTAGCA+GGG | - | chr4_2:2369433-2369452 | None:intergenic | 35.0% | |
| CCTGCTAGGATGTTAATATT+GGG | + | chr4_2:2369431-2369450 | Msa0583670:CDS | 35.0% | |
| CTGCTAGGATGTTAATATTG+GGG | + | chr4_2:2369432-2369451 | Msa0583670:CDS | 35.0% | |
| TGCTAGGATGTTAATATTGG+GGG | + | chr4_2:2369433-2369452 | Msa0583670:CDS | 35.0% | |
| AGAATATTCCTCTACAAGCA+GGG | - | chr4_2:2369616-2369635 | None:intergenic | 35.0% | |
| AAGAATATTCCTCTACAAGC+AGG | - | chr4_2:2369617-2369636 | None:intergenic | 35.0% | |
| ! | AAGGGTATGGAACCTAAAAC+AGG | - | chr4_2:2366015-2366034 | None:intergenic | 40.0% |
| ! | ATGTTGTTGTTACGTTACGC+AGG | - | chr4_2:2366136-2366155 | None:intergenic | 40.0% |
| ATTGTTCCTTCGATCTCCAT+TGG | + | chr4_2:2366268-2366287 | Msa0583670:CDS | 40.0% | |
| GATACCCATTGGAATCTCTA+TGG | + | chr4_2:2366395-2366414 | Msa0583670:CDS | 40.0% | |
| AAAACCACCGTTAGAGATGA+CGG | + | chr4_2:2366493-2366512 | Msa0583670:CDS | 40.0% | |
| AATGTTTGGAAAGGGGAACA+AGG | + | chr4_2:2366565-2366584 | Msa0583670:CDS | 40.0% | |
| ATGTTTGGAAAGGGGAACAA+GGG | + | chr4_2:2366566-2366585 | Msa0583670:CDS | 40.0% | |
| CAAGGGAATCATGAAAGAGA+AGG | + | chr4_2:2366583-2366602 | Msa0583670:CDS | 40.0% | |
| TCAAGTTTGTGATACTTGCG+CGG | + | chr4_2:2366645-2366664 | Msa0583670:CDS | 40.0% | |
| ! | AGAAACCCTCCTTAGCATTT+TGG | - | chr4_2:2366728-2366747 | None:intergenic | 40.0% |
| AATGCTAAGGAGGGTTTCTT+TGG | + | chr4_2:2366729-2366748 | Msa0583670:CDS | 40.0% | |
| TATGCTCAGATGTCACACTT+GGG | + | chr4_2:2366766-2366785 | Msa0583670:CDS | 40.0% | |
| GCCGTTATATCAAAGGTTTG+CGG | + | chr4_2:2367156-2367175 | Msa0583670:intron | 40.0% | |
| TTGCGCAATTTACCATGTGT+TGG | + | chr4_2:2367179-2367198 | Msa0583670:intron | 40.0% | |
| CCAATCCATAATCCAACACA+TGG | - | chr4_2:2367194-2367213 | None:intergenic | 40.0% | |
| CCATGTGTTGGATTATGGAT+TGG | + | chr4_2:2367191-2367210 | Msa0583670:intron | 40.0% | |
| GCTTAAACTTGTCGAGACAA+TGG | + | chr4_2:2367256-2367275 | Msa0583670:intron | 40.0% | |
| ! | TCTTAGTCCTCGTTTAGCTT+TGG | + | chr4_2:2367335-2367354 | Msa0583670:intron | 40.0% |
| TAGGTGATTGATCTTTGGCT+TGG | + | chr4_2:2367426-2367445 | Msa0583670:intron | 40.0% | |
| ! | AGGTGATTGATCTTTGGCTT+GGG | + | chr4_2:2367427-2367446 | Msa0583670:intron | 40.0% |
| !! | TTGATCTTTGGCTTGGGATT+CGG | + | chr4_2:2367433-2367452 | Msa0583670:intron | 40.0% |
| TCTTTACTTTCGACTTCCTG+AGG | - | chr4_2:2367670-2367689 | None:intergenic | 40.0% | |
| AGAGAAGCAAGAAGAAACCA+AGG | + | chr4_2:2367687-2367706 | Msa0583670:CDS | 40.0% | |
| GAAACCAAGGAGCCAAATAA+TGG | + | chr4_2:2367700-2367719 | Msa0583670:CDS | 40.0% | |
| GCTGCATTTGAAGAAGTGAA+TGG | - | chr4_2:2367811-2367830 | None:intergenic | 40.0% | |
| TTTCGTCACTATTGTCGAAG+GGG | + | chr4_2:2368244-2368263 | Msa0583670:intron | 40.0% | |
| CATATATACCTCTGTGCACA+AGG | - | chr4_2:2368355-2368374 | None:intergenic | 40.0% | |
| ! | TGTGCACAGAGGTATATATG+AGG | + | chr4_2:2368355-2368374 | Msa0583670:CDS | 40.0% |
| GGTATATATGAGGCTGCTAA+AGG | + | chr4_2:2368365-2368384 | Msa0583670:CDS | 40.0% | |
| TTTAGGTGAGCATGAACTTC+TGG | - | chr4_2:2368410-2368429 | None:intergenic | 40.0% | |
| TGTTATCACAGGAAGTAGAG+AGG | - | chr4_2:2368540-2368559 | None:intergenic | 40.0% | |
| GACACTCTACTTGAAAAGCT+TGG | + | chr4_2:2368590-2368609 | Msa0583670:CDS | 40.0% | |
| ! | TTTTTGGATAAGCAGGAGTG+CGG | - | chr4_2:2368769-2368788 | None:intergenic | 40.0% |
| GAAGCTACTATACACACCAA+TGG | + | chr4_2:2368902-2368921 | Msa0583670:intron | 40.0% | |
| AGAATCAGCAATTCACCCAT+TGG | - | chr4_2:2368921-2368940 | None:intergenic | 40.0% | |
| ! | GTGTCATTAGGTTCTGACAA+AGG | - | chr4_2:2369017-2369036 | None:intergenic | 40.0% |
| GTTCAAGAACGTCAACTTTG+CGG | - | chr4_2:2369057-2369076 | None:intergenic | 40.0% | |
| CGGTCACTTAATATCTCAAG+TGG | - | chr4_2:2369089-2369108 | None:intergenic | 40.0% | |
| TTAAGTGACCGATCTGCTTA+TGG | + | chr4_2:2369098-2369117 | Msa0583670:CDS | 40.0% | |
| TACGGATCTGGTTAAGTTCT+TGG | - | chr4_2:2369193-2369212 | None:intergenic | 40.0% | |
| GTTGATACCAGCATTGTTGT+TGG | + | chr4_2:2369269-2369288 | Msa0583670:CDS | 40.0% | |
| GTCTTCATTATGCCAGAGAA+CGG | - | chr4_2:2369335-2369354 | None:intergenic | 40.0% | |
| TTCTCTGGCATAATGAAGAC+AGG | + | chr4_2:2369335-2369354 | Msa0583670:CDS | 40.0% | |
| CAGGAAGAGAGTCCTTAAAA+AGG | + | chr4_2:2369354-2369373 | Msa0583670:CDS | 40.0% | |
| !!! | TGTTGCTTTTTTTCCCTGCT+AGG | + | chr4_2:2369417-2369436 | Msa0583670:CDS | 40.0% |
| CCCTGCTAGGATGTTAATAT+TGG | + | chr4_2:2369430-2369449 | Msa0583670:CDS | 40.0% | |
| CCCAATATTAACATCCTAGC+AGG | - | chr4_2:2369434-2369453 | None:intergenic | 40.0% | |
| ! | GTGTATAAAACAAGGGCACA+TGG | + | chr4_2:2369526-2369545 | Msa0583670:three_prime_UTR | 40.0% |
| ! | CACATGGTTAGCTGAATGTT+AGG | + | chr4_2:2369542-2369561 | Msa0583670:three_prime_UTR | 40.0% |
| GTGGCCATAGAGATTCCAAT+GGG | - | chr4_2:2366402-2366421 | None:intergenic | 45.0% | |
| TGTGGCCATAGAGATTCCAA+TGG | - | chr4_2:2366403-2366422 | None:intergenic | 45.0% | |
| AATCTCTATGGCCACAACGA+CGG | + | chr4_2:2366407-2366426 | Msa0583670:CDS | 45.0% | |
| GTATGCTCAGATGTCACACT+TGG | + | chr4_2:2366765-2366784 | Msa0583670:CDS | 45.0% | |
| ATGCTCAGATGTCACACTTG+GGG | + | chr4_2:2366767-2366786 | Msa0583670:CDS | 45.0% | |
| TTTAAGCGAAACCCTACCCA+GGG | - | chr4_2:2367243-2367262 | None:intergenic | 45.0% | |
| ACCAAGGAGCCAAATAATGG+TGG | + | chr4_2:2367703-2367722 | Msa0583670:CDS | 45.0% | |
| ! | TCCACCATTATTTGGCTCCT+TGG | - | chr4_2:2367707-2367726 | None:intergenic | 45.0% |
| CTTCTGCGTTCATCATGTCA+AGG | - | chr4_2:2367858-2367877 | None:intergenic | 45.0% | |
| TGACATGATGAACGCAGAAG+TGG | + | chr4_2:2367858-2367877 | Msa0583670:CDS | 45.0% | |
| !! | TACTGATTCAGTGACAGCAG+TGG | + | chr4_2:2367897-2367916 | Msa0583670:CDS | 45.0% |
| ATCTGCGATGATAACCAGAG+TGG | + | chr4_2:2367997-2368016 | Msa0583670:CDS | 45.0% | |
| GTTCGGAGTCATTAGCATCT+TGG | + | chr4_2:2368155-2368174 | Msa0583670:CDS | 45.0% | |
| TTCGTCACTATTGTCGAAGG+GGG | + | chr4_2:2368245-2368264 | Msa0583670:intron | 45.0% | |
| CATGCTCACCTAAAATCTCG+AGG | + | chr4_2:2368416-2368435 | Msa0583670:CDS | 45.0% | |
| ! | CACGAGAACCTCGAGATTTT+AGG | - | chr4_2:2368427-2368446 | None:intergenic | 45.0% |
| CAAGGGAATGTCCAGTGAAA+CGG | - | chr4_2:2368457-2368476 | None:intergenic | 45.0% | |
| ACAGGAAGTAGAGAGGTGAT+TGG | - | chr4_2:2368533-2368552 | None:intergenic | 45.0% | |
| GGGGAACCAAATGTTATCAC+AGG | - | chr4_2:2368551-2368570 | None:intergenic | 45.0% | |
| GCATTATAATTGCCTGCACG+TGG | - | chr4_2:2368628-2368647 | None:intergenic | 45.0% | |
| !! | TTTTGGATAAGCAGGAGTGC+GGG | - | chr4_2:2368768-2368787 | None:intergenic | 45.0% |
| AGATATAGACCACTGCCTTG+CGG | - | chr4_2:2368984-2369003 | None:intergenic | 45.0% | |
| ! | AGCTTCTTGTCCGTGTCATT+AGG | - | chr4_2:2369029-2369048 | None:intergenic | 45.0% |
| CTCCAGATCCATAAGCAGAT+CGG | - | chr4_2:2369109-2369128 | None:intergenic | 45.0% | |
| GAGAGAAAAGACGCAAGGTA+TGG | + | chr4_2:2369222-2369241 | Msa0583670:CDS | 45.0% | |
| AGAAAAGACGCAAGGTATGG+TGG | + | chr4_2:2369225-2369244 | Msa0583670:CDS | 45.0% | |
| ! | ATACCAGCATTGTTGTTGGG+AGG | + | chr4_2:2369273-2369292 | Msa0583670:CDS | 45.0% |
| !! | TCCATGGTATCGGTCAGTAT+CGG | + | chr4_2:2369296-2369315 | Msa0583670:CDS | 45.0% |
| !! | GATATATAAATTATATTATT+TGG | + | chr4_2:2368069-2368088 | Msa0583670:intron | 5.0% |
| GTTCCTTCGATCTCCATTGG+TGG | + | chr4_2:2366271-2366290 | Msa0583670:CDS | 50.0% | |
| GATCCACCAATGGAGATCGA+AGG | - | chr4_2:2366277-2366296 | None:intergenic | 50.0% | |
| AACGTTCTGTTCCGTCGTTG+TGG | - | chr4_2:2366421-2366440 | None:intergenic | 50.0% | |
| CTCCTCACCGTCATCTCTAA+CGG | - | chr4_2:2366503-2366522 | None:intergenic | 50.0% | |
| ! | GTTAGAGATGACGGTGAGGA+GGG | + | chr4_2:2366502-2366521 | Msa0583670:CDS | 50.0% |
| ! | TTAGAGATGACGGTGAGGAG+GGG | + | chr4_2:2366503-2366522 | Msa0583670:CDS | 50.0% |
| GATGTCACACTTGGGGAGTT+TGG | + | chr4_2:2366774-2366793 | Msa0583670:CDS | 50.0% | |
| ! | CTTTCTTGGCTTGAATGGGG+TGG | + | chr4_2:2367055-2367074 | Msa0583670:intron | 50.0% |
| GTTTAAGCGAAACCCTACCC+AGG | - | chr4_2:2367244-2367263 | None:intergenic | 50.0% | |
| GTGCAGATAAGATGCAGCAG+AGG | - | chr4_2:2367767-2367786 | None:intergenic | 50.0% | |
| ACTTCTTCAAATGCAGCGGC+TGG | + | chr4_2:2367814-2367833 | Msa0583670:CDS | 50.0% | |
| CGCAGAAGTGGCATCTTTGA+TGG | + | chr4_2:2367870-2367889 | Msa0583670:CDS | 50.0% | |
| TTCAGTGACAGCAGTGGTTG+CGG | + | chr4_2:2367903-2367922 | Msa0583670:CDS | 50.0% | |
| GGCAAAGGAGGAAGTAAAGC+AGG | + | chr4_2:2367924-2367943 | Msa0583670:CDS | 50.0% | |
| TCGCAGATGAACCATTCGCA+AGG | - | chr4_2:2367985-2368004 | None:intergenic | 50.0% | |
| TCGTCACTATTGTCGAAGGG+GGG | + | chr4_2:2368246-2368265 | Msa0583670:intron | 50.0% | |
| CACAAGGACATCCAAACCCT+GGG | - | chr4_2:2368339-2368358 | None:intergenic | 50.0% | |
| TTGGATGTCCTTGTGCACAG+AGG | + | chr4_2:2368344-2368363 | Msa0583670:CDS | 50.0% | |
| CGTGCAACTTTCCGTTTCAC+TGG | + | chr4_2:2368443-2368462 | Msa0583670:CDS | 50.0% | |
| CGTTTCACTGGACATTCCCT+TGG | + | chr4_2:2368455-2368474 | Msa0583670:CDS | 50.0% | |
| TTCACTGGACATTCCCTTGG+TGG | + | chr4_2:2368458-2368477 | Msa0583670:CDS | 50.0% | |
| ACATTCCCTTGGTGGAAGCT+TGG | + | chr4_2:2368466-2368485 | Msa0583670:CDS | 50.0% | |
| TAGTGCCAAGCTTCCACCAA+GGG | - | chr4_2:2368474-2368493 | None:intergenic | 50.0% | |
| TGCGGCAGAAGATTATGGCT+TGG | - | chr4_2:2368966-2368985 | None:intergenic | 50.0% | |
| AGCCATAATCTTCTGCCGCA+AGG | + | chr4_2:2368966-2368985 | Msa0583670:CDS | 50.0% | |
| TGCCTTGCGGCAGAAGATTA+TGG | - | chr4_2:2368971-2368990 | None:intergenic | 50.0% | |
| AGAACGTCAACTTTGCGGCT+CGG | - | chr4_2:2369052-2369071 | None:intergenic | 50.0% | |
| GACCGATCTGCTTATGGATC+TGG | + | chr4_2:2369104-2369123 | Msa0583670:CDS | 50.0% | |
| CGATCTGCTTATGGATCTGG+AGG | + | chr4_2:2369107-2369126 | Msa0583670:CDS | 50.0% | |
| !! | CTCGCATCGATTTACGGATC+TGG | - | chr4_2:2369205-2369224 | None:intergenic | 50.0% |
| GATGCGAGAGAAAAGACGCA+AGG | + | chr4_2:2369217-2369236 | Msa0583670:CDS | 50.0% | |
| ATGCTGGTATCAACTCGTCG+CGG | - | chr4_2:2369263-2369282 | None:intergenic | 50.0% | |
| ! | CATTGTTGTTGGGAGGTCCA+TGG | + | chr4_2:2369280-2369299 | Msa0583670:CDS | 50.0% |
| TGTTGGGAGGTCCATGGTAT+CGG | + | chr4_2:2369286-2369305 | Msa0583670:CDS | 50.0% | |
| TTATGCCAGAGAACGGTGAC+TGG | - | chr4_2:2369328-2369347 | None:intergenic | 50.0% | |
| CTCAAGAACCCTGCTTGTAG+AGG | + | chr4_2:2369605-2369624 | Msa0583670:three_prime_UTR | 50.0% | |
| CACCGCATCTACCGTAAGTG+CGG | + | chr4_2:2366321-2366340 | Msa0583670:CDS | 55.0% | |
| CACCGCACTTACGGTAGATG+CGG | - | chr4_2:2366326-2366345 | None:intergenic | 55.0% | |
| GCATCTACCGTAAGTGCGGT+GGG | + | chr4_2:2366325-2366344 | Msa0583670:CDS | 55.0% | |
| TTCACGACCCACCGCACTTA+CGG | - | chr4_2:2366335-2366354 | None:intergenic | 55.0% | |
| CGACGGAACAGAACGTTCAG+TGG | + | chr4_2:2366424-2366443 | Msa0583670:CDS | 55.0% | |
| CTCACCGTCATCTCTAACGG+TGG | - | chr4_2:2366500-2366519 | None:intergenic | 55.0% | |
| ! | CACCGTTAGAGATGACGGTG+AGG | + | chr4_2:2366498-2366517 | Msa0583670:CDS | 55.0% |
| ! | CGTTAGAGATGACGGTGAGG+AGG | + | chr4_2:2366501-2366520 | Msa0583670:CDS | 55.0% |
| AGGAGGGGCAGAGAGAGAAT+TGG | + | chr4_2:2366518-2366537 | Msa0583670:CDS | 55.0% | |
| GGAGGGGCAGAGAGAGAATT+GGG | + | chr4_2:2366519-2366538 | Msa0583670:CDS | 55.0% | |
| TCAAATGCAGCGGCTGGTGA+AGG | + | chr4_2:2367820-2367839 | Msa0583670:CDS | 55.0% | |
| CTCGTTCGTCACCTTGCGAA+TGG | + | chr4_2:2367971-2367990 | Msa0583670:CDS | 55.0% | |
| GCACAAGGACATCCAAACCC+TGG | - | chr4_2:2368340-2368359 | None:intergenic | 55.0% | |
| GTAGTGCCAAGCTTCCACCA+AGG | - | chr4_2:2368475-2368494 | None:intergenic | 55.0% | |
| GGTTCCCCTTCCATCATGTG+TGG | + | chr4_2:2368563-2368582 | Msa0583670:CDS | 55.0% | |
| TCCCCTTCCATCATGTGTGG+AGG | + | chr4_2:2368566-2368585 | Msa0583670:CDS | 55.0% | |
| ! | GCCTCCACACATGATGGAAG+GGG | - | chr4_2:2368570-2368589 | None:intergenic | 55.0% |
| ! | CGCCTCCACACATGATGGAA+GGG | - | chr4_2:2368571-2368590 | None:intergenic | 55.0% |
| ! | TCGCCTCCACACATGATGGA+AGG | - | chr4_2:2368572-2368591 | None:intergenic | 55.0% |
| AGTGTCGCCTCCACACATGA+TGG | - | chr4_2:2368576-2368595 | None:intergenic | 55.0% | |
| ! | CAGGAGTGCGGGACTTTACT+TGG | - | chr4_2:2368757-2368776 | None:intergenic | 55.0% |
| AATCTTCTGCCGCAAGGCAG+TGG | + | chr4_2:2368972-2368991 | Msa0583670:CDS | 55.0% | |
| ACTCGTCGCGGTAGTACAAG+AGG | - | chr4_2:2369251-2369270 | None:intergenic | 55.0% | |
| GGACCTCCCAACAACAATGC+TGG | - | chr4_2:2369279-2369298 | None:intergenic | 55.0% | |
| GCCGATACTGACCGATACCA+TGG | - | chr4_2:2369300-2369319 | None:intergenic | 55.0% | |
| CGCACTTACGGTAGATGCGG+TGG | - | chr4_2:2366323-2366342 | None:intergenic | 60.0% | |
| CGCATCTACCGTAAGTGCGG+TGG | + | chr4_2:2366324-2366343 | Msa0583670:CDS | 60.0% | |
| ! | GTCTCTCGACGACGCCGTTT+TGG | + | chr4_2:2366450-2366469 | Msa0583670:CDS | 60.0% |
| GACAGCAGTGGTTGCGGCAA+AGG | + | chr4_2:2367909-2367928 | Msa0583670:CDS | 60.0% | |
| AGCAGTGGTTGCGGCAAAGG+AGG | + | chr4_2:2367912-2367931 | Msa0583670:CDS | 60.0% | |
| ATTGCCTGCACGTGGCTTCG+CGG | - | chr4_2:2368620-2368639 | None:intergenic | 60.0% | |
| CAGAGAACGGTGACTGGCGT+TGG | - | chr4_2:2369322-2369341 | None:intergenic | 60.0% | |
| CAACGCCAGTCACCGTTCTC+TGG | + | chr4_2:2369320-2369339 | Msa0583670:CDS | 60.0% | |
| CCTGCACGTGGCTTCGCGGC+AGG | - | chr4_2:2368616-2368635 | None:intergenic | 75.0% | |
| CCTGCCGCGAAGCCACGTGC+AGG | + | chr4_2:2368613-2368632 | Msa0583670:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 2366000 | 2369677 | 2366000 | ID=Msa0583670;Name=Msa0583670 |
| chr4_2 | mRNA | 2366000 | 2369677 | 2366000 | ID=Msa0583670-mRNA-1;Parent=Msa0583670;Name=Msa0583670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=241|1|1|1|1|1|5|196|698 |
| chr4_2 | exon | 2366000 | 2366819 | 2366000 | ID=Msa0583670-mRNA-1:exon:614;Parent=Msa0583670-mRNA-1 |
| chr4_2 | exon | 2367580 | 2368041 | 2367580 | ID=Msa0583670-mRNA-1:exon:615;Parent=Msa0583670-mRNA-1 |
| chr4_2 | exon | 2368154 | 2368213 | 2368154 | ID=Msa0583670-mRNA-1:exon:616;Parent=Msa0583670-mRNA-1 |
| chr4_2 | exon | 2368341 | 2368757 | 2368341 | ID=Msa0583670-mRNA-1:exon:617;Parent=Msa0583670-mRNA-1 |
| chr4_2 | exon | 2368903 | 2369677 | 2368903 | ID=Msa0583670-mRNA-1:exon:618;Parent=Msa0583670-mRNA-1 |
| chr4_2 | five_prime_UTR | 2366000 | 2366240 | 2366000 | ID=Msa0583670-mRNA-1:five_prime_utr;Parent=Msa0583670-mRNA-1 |
| chr4_2 | CDS | 2366241 | 2366819 | 2366241 | ID=Msa0583670-mRNA-1:cds;Parent=Msa0583670-mRNA-1 |
| chr4_2 | CDS | 2367580 | 2368041 | 2367580 | ID=Msa0583670-mRNA-1:cds;Parent=Msa0583670-mRNA-1 |
| chr4_2 | CDS | 2368154 | 2368213 | 2368154 | ID=Msa0583670-mRNA-1:cds;Parent=Msa0583670-mRNA-1 |
| chr4_2 | CDS | 2368341 | 2368757 | 2368341 | ID=Msa0583670-mRNA-1:cds;Parent=Msa0583670-mRNA-1 |
| chr4_2 | CDS | 2368903 | 2369481 | 2368903 | ID=Msa0583670-mRNA-1:cds;Parent=Msa0583670-mRNA-1 |
| chr4_2 | three_prime_UTR | 2369482 | 2369677 | 2369482 | ID=Msa0583670-mRNA-1:three_prime_utr;Parent=Msa0583670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
