Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137980 | XP_013470249.1 | 97.959 | 245 | 4 | 1 | 1 | 245 | 1 | 244 | 2.81e-177 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137980 | sp|Q9FNN6|SRM1_ARATH | 54.545 | 187 | 69 | 3 | 25 | 200 | 12 | 193 | 2.08e-59 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137980 | G7ZYT0 | 97.959 | 245 | 4 | 1 | 1 | 245 | 1 | 244 | 1.34e-177 | 496 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0137980 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0137980 | -0.808396 | 3.161172e-50 | -8.615850e-47 |
| Msa0004480 | Msa0137980 | 0.861173 | 1.235955e-63 | -8.615850e-47 |
| Msa0011050 | Msa0137980 | 0.830556 | 2.747346e-55 | -8.615850e-47 |
| Msa0026630 | Msa0137980 | 0.811643 | 6.318645e-51 | -8.615850e-47 |
| Msa0033840 | Msa0137980 | -0.821136 | 4.740685e-53 | -8.615850e-47 |
| Msa0043850 | Msa0137980 | 0.995530 | 3.378636e-217 | -8.615850e-47 |
| Msa0061220 | Msa0137980 | 0.836618 | 8.418062e-57 | -8.615850e-47 |
| Msa0077370 | Msa0137980 | 0.841770 | 3.885302e-58 | -8.615850e-47 |
| Msa0081610 | Msa0137980 | -0.813272 | 2.784282e-51 | -8.615850e-47 |
| Msa0082230 | Msa0137980 | 0.829914 | 3.942319e-55 | -8.615850e-47 |
| Msa0082420 | Msa0137980 | 0.854832 | 9.461683e-62 | -8.615850e-47 |
| Msa0090510 | Msa0137980 | 0.952925 | 8.428567e-111 | -8.615850e-47 |
| Msa0094710 | Msa0137980 | 0.812099 | 5.026755e-51 | -8.615850e-47 |
| Msa0097570 | Msa0137980 | 0.802867 | 4.575730e-49 | -8.615850e-47 |
| Msa0101960 | Msa0137980 | 0.802529 | 5.373828e-49 | -8.615850e-47 |
| Msa0136630 | Msa0137980 | 0.828528 | 8.549448e-55 | -8.615850e-47 |
| Msa0137980 | Msa0138900 | 0.840092 | 1.070910e-57 | -8.615850e-47 |
| Msa0137980 | Msa0147790 | 0.819024 | 1.443212e-52 | -8.615850e-47 |
| Msa0137980 | Msa0151220 | 0.835991 | 1.215647e-56 | -8.615850e-47 |
| Msa0137980 | Msa0173950 | -0.805474 | 1.311654e-49 | -8.615850e-47 |
| Msa0137980 | Msa0174100 | 0.801300 | 9.611597e-49 | -8.615850e-47 |
| Msa0137980 | Msa0176260 | 0.817854 | 2.656796e-52 | -8.615850e-47 |
| Msa0137980 | Msa0183910 | 0.952898 | 8.952657e-111 | -8.615850e-47 |
| Msa0137980 | Msa0199350 | 0.805515 | 1.286243e-49 | -8.615850e-47 |
| Msa0137980 | Msa0213430 | 0.811757 | 5.969097e-51 | -8.615850e-47 |
| Msa0137980 | Msa0223140 | 0.806710 | 7.207768e-50 | -8.615850e-47 |
| Msa0137980 | Msa0224130 | 0.832083 | 1.157299e-55 | -8.615850e-47 |
| Msa0137980 | Msa0259440 | 0.837846 | 4.084732e-57 | -8.615850e-47 |
| Msa0137980 | Msa0259580 | 0.824004 | 1.020648e-53 | -8.615850e-47 |
| Msa0137980 | Msa0265270 | 0.831830 | 1.336504e-55 | -8.615850e-47 |
| Msa0137980 | Msa0276430 | 0.823763 | 1.162624e-53 | -8.615850e-47 |
| Msa0137980 | Msa0305620 | 0.832078 | 1.160294e-55 | -8.615850e-47 |
| Msa0137980 | Msa0310730 | -0.800193 | 1.616251e-48 | -8.615850e-47 |
| Msa0137980 | Msa0316470 | 0.820985 | 5.136301e-53 | -8.615850e-47 |
| Msa0137980 | Msa0319020 | 0.800643 | 1.308819e-48 | -8.615850e-47 |
| Msa0137980 | Msa0364790 | 0.825272 | 5.130586e-54 | -8.615850e-47 |
| Msa0137980 | Msa0365950 | 0.803057 | 4.179248e-49 | -8.615850e-47 |
| Msa0137980 | Msa0366780 | 0.808629 | 2.819464e-50 | -8.615850e-47 |
| Msa0137980 | Msa0374340 | -0.820502 | 6.630272e-53 | -8.615850e-47 |
| Msa0137980 | Msa0374420 | -0.807909 | 4.014841e-50 | -8.615850e-47 |
| Msa0137980 | Msa0380400 | -0.816856 | 4.456801e-52 | -8.615850e-47 |
| Msa0137980 | Msa0380600 | 0.825707 | 4.048231e-54 | -8.615850e-47 |
| Msa0137980 | Msa0403470 | -0.836229 | 1.057563e-56 | -8.615850e-47 |
| Msa0137980 | Msa0412260 | 0.800549 | 1.368297e-48 | -8.615850e-47 |
| Msa0137980 | Msa0414730 | 0.810200 | 1.297361e-50 | -8.615850e-47 |
| Msa0137980 | Msa0427310 | 0.827115 | 1.869730e-54 | -8.615850e-47 |
| Msa0137980 | Msa0428200 | 0.804916 | 1.716746e-49 | -8.615850e-47 |
| Msa0137980 | Msa0430240 | 0.824699 | 7.006081e-54 | -8.615850e-47 |
| Msa0137980 | Msa0456770 | 0.825361 | 4.888475e-54 | -8.615850e-47 |
| Msa0137980 | Msa0474560 | 0.801171 | 1.021259e-48 | -8.615850e-47 |
| Msa0137980 | Msa0476170 | -0.801457 | 8.924916e-49 | -8.615850e-47 |
| Msa0137980 | Msa0500400 | 0.819469 | 1.142907e-52 | -8.615850e-47 |
| Msa0137980 | Msa0517990 | 0.817655 | 2.946925e-52 | -8.615850e-47 |
| Msa0137980 | Msa0529000 | 0.837495 | 5.025655e-57 | -8.615850e-47 |
| Msa0137980 | Msa0542530 | 0.804365 | 2.237083e-49 | -8.615850e-47 |
| Msa0137980 | Msa0545020 | 0.818520 | 1.877819e-52 | -8.615850e-47 |
| Msa0137980 | Msa0545050 | 0.821551 | 3.801887e-53 | -8.615850e-47 |
| Msa0137980 | Msa0561360 | 0.805350 | 1.392536e-49 | -8.615850e-47 |
| Msa0137980 | Msa0567370 | 0.834743 | 2.512573e-56 | -8.615850e-47 |
| Msa0137980 | Msa0576120 | -0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa0137980 | Msa0584580 | 0.809262 | 2.063738e-50 | -8.615850e-47 |
| Msa0137980 | Msa0584600 | 0.811059 | 8.459131e-51 | -8.615850e-47 |
| Msa0137980 | Msa0588590 | 0.814343 | 1.616582e-51 | -8.615850e-47 |
| Msa0137980 | Msa0592330 | 0.855565 | 5.791701e-62 | -8.615850e-47 |
| Msa0137980 | Msa0600590 | 0.839913 | 1.192253e-57 | -8.615850e-47 |
| Msa0137980 | Msa0606080 | 0.810909 | 9.116552e-51 | -8.615850e-47 |
| Msa0137980 | Msa0632420 | 0.821763 | 3.396168e-53 | -8.615850e-47 |
| Msa0137980 | Msa0641130 | 0.819682 | 1.021462e-52 | -8.615850e-47 |
| Msa0137980 | Msa0653880 | 0.803963 | 2.712425e-49 | -8.615850e-47 |
| Msa0137980 | Msa0654900 | 0.803170 | 3.961992e-49 | -8.615850e-47 |
| Msa0137980 | Msa0679670 | 0.805751 | 1.147651e-49 | -8.615850e-47 |
| Msa0137980 | Msa0696100 | 0.801416 | 9.096807e-49 | -8.615850e-47 |
| Msa0137980 | Msa0697680 | 0.833913 | 4.058218e-56 | -8.615850e-47 |
| Msa0137980 | Msa0698450 | 0.830740 | 2.477518e-55 | -8.615850e-47 |
| Msa0137980 | Msa0698460 | 0.830639 | 2.622197e-55 | -8.615850e-47 |
| Msa0137980 | Msa0703810 | 0.817153 | 3.821759e-52 | -8.615850e-47 |
| Msa0137980 | Msa0734940 | 0.825145 | 5.499883e-54 | -8.615850e-47 |
| Msa0137980 | Msa0742430 | 0.826728 | 2.313552e-54 | -8.615850e-47 |
| Msa0137980 | Msa0744640 | 0.813309 | 2.731505e-51 | -8.615850e-47 |
| Msa0137980 | Msa0769720 | 0.845821 | 3.196932e-59 | -8.615850e-47 |
| Msa0137980 | Msa0787790 | 0.811408 | 7.105100e-51 | -8.615850e-47 |
| Msa0137980 | Msa0794350 | 0.802829 | 4.658523e-49 | -8.615850e-47 |
| Msa0137980 | Msa0796580 | -0.816032 | 6.814063e-52 | -8.615850e-47 |
| Msa0137980 | Msa0798450 | 0.812974 | 3.235367e-51 | -8.615850e-47 |
| Msa0137980 | Msa0810440 | 0.833515 | 5.100848e-56 | -8.615850e-47 |
| Msa0137980 | Msa0816630 | 0.805281 | 1.439646e-49 | -8.615850e-47 |
| Msa0137980 | Msa0817710 | 0.807457 | 5.008545e-50 | -8.615850e-47 |
| Msa0137980 | Msa0823540 | 0.835244 | 1.878953e-56 | -8.615850e-47 |
| Msa0137980 | Msa0841730 | 0.813317 | 2.720994e-51 | -8.615850e-47 |
| Msa0137980 | Msa0848440 | 0.826422 | 2.737226e-54 | -8.615850e-47 |
| Msa0137980 | Msa0862620 | 0.838389 | 2.960177e-57 | -8.615850e-47 |
| Msa0137980 | Msa0863990 | 0.818874 | 1.560490e-52 | -8.615850e-47 |
| Msa0137980 | Msa0881530 | -0.804358 | 2.244183e-49 | -8.615850e-47 |
| Msa0137980 | Msa0968050 | 0.843858 | 1.082006e-58 | -8.615850e-47 |
| Msa0137980 | Msa0968470 | -0.816011 | 6.889483e-52 | -8.615850e-47 |
| Msa0137980 | Msa0982090 | -0.831749 | 1.399126e-55 | -8.615850e-47 |
| Msa0137980 | Msa1011250 | 0.814369 | 1.595990e-51 | -8.615850e-47 |
| Msa0137980 | Msa1016960 | 0.822522 | 2.264295e-53 | -8.615850e-47 |
| Msa0137980 | Msa1029520 | 0.833109 | 6.440287e-56 | -8.615850e-47 |
| Msa0137980 | Msa1031460 | 0.869272 | 3.506462e-66 | -8.615850e-47 |
| Msa0137980 | Msa1058200 | 0.824154 | 9.410536e-54 | -8.615850e-47 |
| Msa0137980 | Msa1062040 | 0.842572 | 2.382314e-58 | -8.615850e-47 |
| Msa0137980 | Msa1063360 | 0.816737 | 4.740055e-52 | -8.615850e-47 |
| Msa0137980 | Msa1068380 | 0.809750 | 1.621279e-50 | -8.615850e-47 |
| Msa0137980 | Msa1070540 | 0.890509 | 9.240182e-74 | -8.615850e-47 |
| Msa0137980 | Msa1082360 | 0.849674 | 2.779310e-60 | -8.615850e-47 |
| Msa0137980 | Msa1082520 | 0.825826 | 3.792962e-54 | -8.615850e-47 |
| Msa0137980 | Msa1082600 | 0.810251 | 1.264581e-50 | -8.615850e-47 |
| Msa0137980 | Msa1089190 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
| Msa0137980 | Msa1101240 | 0.886424 | 3.460730e-72 | -8.615850e-47 |
| Msa0137980 | Msa1107200 | 0.831560 | 1.557963e-55 | -8.615850e-47 |
| Msa0137980 | Msa1109810 | 0.846178 | 2.556668e-59 | -8.615850e-47 |
| Msa0137980 | Msa1113100 | 0.832458 | 9.344677e-56 | -8.615850e-47 |
| Msa0137980 | Msa1114620 | 0.827747 | 1.318802e-54 | -8.615850e-47 |
| Msa0137980 | Msa1121300 | 0.818188 | 2.233480e-52 | -8.615850e-47 |
| Msa0137980 | Msa1127260 | 0.818436 | 1.962563e-52 | -8.615850e-47 |
| Msa0137980 | Msa1150780 | 0.816830 | 4.516412e-52 | -8.615850e-47 |
| Msa0137980 | Msa1156490 | 0.812549 | 4.009355e-51 | -8.615850e-47 |
| Msa0137980 | Msa1158390 | 0.812484 | 4.141479e-51 | -8.615850e-47 |
| Msa0137980 | Msa1165430 | 0.813369 | 2.651013e-51 | -8.615850e-47 |
| Msa0137980 | Msa1168640 | 0.809058 | 2.282031e-50 | -8.615850e-47 |
| Msa0137980 | Msa1183140 | 0.849883 | 2.429341e-60 | -8.615850e-47 |
| Msa0137980 | Msa1188350 | 0.846336 | 2.315348e-59 | -8.615850e-47 |
| Msa0137980 | Msa1190100 | -0.806979 | 6.321640e-50 | -8.615850e-47 |
| Msa0137980 | Msa1208450 | -0.828257 | 9.942716e-55 | -8.615850e-47 |
| Msa0137980 | Msa1208990 | 0.816788 | 4.616179e-52 | -8.615850e-47 |
| Msa0137980 | Msa1212470 | 0.811247 | 7.700892e-51 | -8.615850e-47 |
| Msa0137980 | Msa1214170 | 0.803942 | 2.740363e-49 | -8.615850e-47 |
| Msa0137980 | Msa1218160 | 0.845024 | 5.253973e-59 | -8.615850e-47 |
| Msa0137980 | Msa1221220 | 0.803644 | 3.159853e-49 | -8.615850e-47 |
| Msa0137980 | Msa1221630 | 0.824474 | 7.913647e-54 | -8.615850e-47 |
| Msa0137980 | Msa1221960 | 0.805753 | 1.146361e-49 | -8.615850e-47 |
| Msa0137980 | Msa1229480 | 0.851497 | 8.542854e-61 | -8.615850e-47 |
| Msa0137980 | Msa1236440 | 0.805235 | 1.472190e-49 | -8.615850e-47 |
| Msa0137980 | Msa1238680 | 0.844513 | 7.214811e-59 | -8.615850e-47 |
| Msa0137980 | Msa1252000 | 0.846433 | 2.178970e-59 | -8.615850e-47 |
| Msa0137980 | Msa1260060 | 0.815324 | 9.798472e-52 | -8.615850e-47 |
| Msa0137980 | Msa1265020 | 0.820347 | 7.195072e-53 | -8.615850e-47 |
| Msa0137980 | Msa1272010 | 0.829870 | 4.041484e-55 | -8.615850e-47 |
| Msa0137980 | Msa1277670 | 0.806052 | 9.917272e-50 | -8.615850e-47 |
| Msa0137980 | Msa1280170 | 0.806980 | 6.321262e-50 | -8.615850e-47 |
| Msa0137980 | Msa1298390 | -0.812705 | 3.706417e-51 | -8.615850e-47 |
| Msa0137980 | Msa1299780 | 0.816182 | 6.307828e-52 | -8.615850e-47 |
| Msa0137980 | Msa1307160 | 0.813848 | 2.078872e-51 | -8.615850e-47 |
| Msa0137980 | Msa1309760 | 0.841524 | 4.511457e-58 | -8.615850e-47 |
| Msa0137980 | Msa1312140 | 0.803256 | 3.801901e-49 | -8.615850e-47 |
| Msa0137980 | Msa1337850 | 0.823041 | 1.714587e-53 | -8.615850e-47 |
| Msa0137980 | Msa1350700 | 0.800020 | 1.752743e-48 | -8.615850e-47 |
| Msa0137980 | Msa1360260 | 0.807191 | 5.701940e-50 | -8.615850e-47 |
| Msa0137980 | Msa1364080 | 0.827835 | 1.256284e-54 | -8.615850e-47 |
| Msa0137980 | Msa1369920 | -0.829109 | 6.185405e-55 | -8.615850e-47 |
| Msa0137980 | Msa1370810 | 0.825194 | 5.354047e-54 | -8.615850e-47 |
| Msa0137980 | Msa1375610 | -0.809725 | 1.641742e-50 | -8.615850e-47 |
| Msa0137980 | Msa1376550 | -0.805540 | 1.270818e-49 | -8.615850e-47 |
| Msa0137980 | Msa1379020 | 0.852891 | 3.427776e-61 | -8.615850e-47 |
| Msa0137980 | Msa1382380 | -0.829311 | 5.526925e-55 | -8.615850e-47 |
| Msa0137980 | Msa1389640 | 0.827797 | 1.282835e-54 | -8.615850e-47 |
| Msa0137980 | Msa1407760 | 0.832784 | 7.759982e-56 | -8.615850e-47 |
| Msa0137980 | Msa1407880 | 0.873354 | 1.569162e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137980 | MtrunA17_Chr1g0210471 | 97.959 | 245 | 4 | 1 | 1 | 245 | 1 | 244 | 0.0 | 496 |
| Msa0137980 | MtrunA17_Chr1g0162081 | 54.688 | 192 | 69 | 2 | 23 | 200 | 10 | 197 | 2.05e-63 | 200 |
| Msa0137980 | MtrunA17_Chr3g0104071 | 44.578 | 249 | 108 | 8 | 23 | 245 | 41 | 285 | 4.13e-59 | 189 |
| Msa0137980 | MtrunA17_Chr5g0429521 | 50.282 | 177 | 79 | 2 | 23 | 193 | 27 | 200 | 7.75e-56 | 181 |
| Msa0137980 | MtrunA17_Chr7g0241761 | 49.206 | 189 | 79 | 4 | 23 | 200 | 33 | 215 | 8.49e-55 | 178 |
| Msa0137980 | MtrunA17_Chr5g0436501 | 49.189 | 185 | 80 | 4 | 23 | 200 | 25 | 202 | 9.38e-55 | 177 |
| Msa0137980 | MtrunA17_Chr4g0062741 | 46.500 | 200 | 77 | 3 | 25 | 194 | 8 | 207 | 6.09e-54 | 176 |
| Msa0137980 | MtrunA17_Chr8g0365011 | 42.708 | 192 | 80 | 3 | 23 | 200 | 6 | 181 | 5.12e-42 | 144 |
| Msa0137980 | MtrunA17_Chr4g0055931 | 52.800 | 125 | 43 | 2 | 94 | 202 | 49 | 173 | 9.50e-36 | 129 |
| Msa0137980 | MtrunA17_Chr2g0331031 | 62.222 | 90 | 33 | 1 | 120 | 208 | 104 | 193 | 4.79e-33 | 122 |
| Msa0137980 | MtrunA17_Chr5g0432921 | 40.000 | 190 | 98 | 7 | 24 | 209 | 20 | 197 | 6.20e-33 | 119 |
| Msa0137980 | MtrunA17_Chr5g0432941 | 40.415 | 193 | 92 | 8 | 24 | 209 | 21 | 197 | 1.27e-31 | 115 |
| Msa0137980 | MtrunA17_Chr8g0389241 | 62.069 | 87 | 32 | 1 | 103 | 189 | 83 | 168 | 1.77e-30 | 114 |
| Msa0137980 | MtrunA17_Chr6g0488471 | 71.429 | 70 | 20 | 0 | 120 | 189 | 92 | 161 | 2.09e-30 | 114 |
| Msa0137980 | MtrunA17_Chr5g0415191 | 68.421 | 76 | 24 | 0 | 116 | 191 | 93 | 168 | 3.94e-27 | 106 |
| Msa0137980 | MtrunA17_Chr4g0059701 | 65.169 | 89 | 29 | 2 | 118 | 206 | 77 | 163 | 3.60e-26 | 103 |
| Msa0137980 | MtrunA17_Chr3g0092621 | 65.152 | 66 | 23 | 0 | 126 | 191 | 85 | 150 | 6.38e-25 | 97.1 |
| Msa0137980 | MtrunA17_Chr8g0364741 | 43.548 | 124 | 62 | 3 | 23 | 142 | 8 | 127 | 3.83e-24 | 93.6 |
| Msa0137980 | MtrunA17_Chr5g0409841 | 41.304 | 138 | 68 | 5 | 86 | 219 | 56 | 184 | 4.04e-24 | 96.7 |
| Msa0137980 | MtrunA17_Chr5g0440731 | 40.000 | 155 | 70 | 6 | 73 | 210 | 56 | 204 | 7.11e-24 | 97.1 |
| Msa0137980 | MtrunA17_Chr5g0440741 | 50.505 | 99 | 33 | 3 | 127 | 210 | 102 | 199 | 1.27e-23 | 96.3 |
| Msa0137980 | MtrunA17_Chr3g0135671 | 64.789 | 71 | 22 | 2 | 122 | 189 | 88 | 158 | 1.98e-23 | 94.7 |
| Msa0137980 | MtrunA17_Chr8g0364731 | 69.565 | 69 | 17 | 2 | 134 | 198 | 10 | 78 | 5.86e-21 | 87.0 |
| Msa0137980 | MtrunA17_Chr6g0452791 | 53.846 | 78 | 25 | 2 | 126 | 203 | 81 | 147 | 4.35e-20 | 84.3 |
| Msa0137980 | MtrunA17_Chr5g0409831 | 48.387 | 93 | 44 | 2 | 115 | 203 | 67 | 159 | 3.02e-18 | 80.9 |
| Msa0137980 | MtrunA17_Chr1g0155181 | 42.254 | 71 | 41 | 0 | 25 | 95 | 7 | 77 | 3.65e-16 | 71.2 |
| Msa0137980 | MtrunA17_Chr8g0357851 | 85.417 | 48 | 7 | 0 | 1 | 48 | 1 | 48 | 6.31e-16 | 69.7 |
| Msa0137980 | MtrunA17_Chr3g0144631 | 47.619 | 63 | 33 | 0 | 25 | 87 | 16 | 78 | 1.10e-15 | 70.1 |
| Msa0137980 | MtrunA17_Chr3g0141601 | 41.667 | 72 | 42 | 0 | 23 | 94 | 5 | 76 | 2.83e-15 | 69.3 |
| Msa0137980 | MtrunA17_Chr5g0404101 | 44.928 | 69 | 38 | 0 | 19 | 87 | 13 | 81 | 9.91e-15 | 67.8 |
| Msa0137980 | MtrunA17_Chr1g0192061 | 52.055 | 73 | 31 | 2 | 127 | 196 | 63 | 134 | 5.33e-14 | 68.2 |
| Msa0137980 | MtrunA17_Chr6g0449111 | 43.284 | 67 | 38 | 0 | 23 | 89 | 8 | 74 | 5.63e-14 | 65.5 |
| Msa0137980 | MtrunA17_Chr3g0113121 | 34.014 | 147 | 73 | 5 | 68 | 193 | 27 | 170 | 2.02e-13 | 67.4 |
| Msa0137980 | MtrunA17_Chr7g0255841 | 50.000 | 58 | 29 | 0 | 30 | 87 | 17 | 74 | 4.22e-13 | 63.5 |
| Msa0137980 | MtrunA17_Chr3g0081631 | 40.909 | 66 | 38 | 1 | 25 | 89 | 10 | 75 | 3.42e-12 | 60.8 |
| Msa0137980 | MtrunA17_Chr3g0141641 | 36.264 | 91 | 48 | 4 | 25 | 114 | 3 | 84 | 2.50e-11 | 58.5 |
| Msa0137980 | MtrunA17_Chr8g0373131 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 3.54e-11 | 57.8 |
| Msa0137980 | MtrunA17_Chr8g0373111 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 4.24e-11 | 57.4 |
| Msa0137980 | MtrunA17_Chr8g0373121 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 4.24e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137980 | AT5G04760.1 | 58.296 | 223 | 82 | 4 | 23 | 245 | 4 | 215 | 2.52e-80 | 240 |
| Msa0137980 | AT5G08520.1 | 54.545 | 187 | 69 | 3 | 25 | 200 | 12 | 193 | 2.11e-60 | 192 |
| Msa0137980 | AT3G11280.2 | 51.497 | 167 | 75 | 2 | 25 | 191 | 33 | 193 | 2.55e-55 | 178 |
| Msa0137980 | AT3G11280.1 | 51.497 | 167 | 75 | 2 | 25 | 191 | 33 | 193 | 2.55e-55 | 178 |
| Msa0137980 | AT2G38090.1 | 40.000 | 260 | 130 | 6 | 6 | 243 | 7 | 262 | 9.26e-55 | 178 |
| Msa0137980 | AT5G58900.1 | 47.778 | 180 | 79 | 2 | 25 | 193 | 34 | 209 | 2.61e-53 | 174 |
| Msa0137980 | AT5G05790.2 | 46.591 | 176 | 88 | 2 | 21 | 193 | 27 | 199 | 5.18e-53 | 173 |
| Msa0137980 | AT5G05790.1 | 46.591 | 176 | 88 | 2 | 21 | 193 | 27 | 199 | 5.18e-53 | 173 |
| Msa0137980 | AT1G49010.1 | 45.175 | 228 | 87 | 7 | 25 | 226 | 8 | 223 | 6.32e-53 | 174 |
| Msa0137980 | AT5G01200.1 | 40.376 | 213 | 103 | 5 | 1 | 193 | 6 | 214 | 2.67e-45 | 152 |
| Msa0137980 | AT5G23650.1 | 40.359 | 223 | 111 | 3 | 23 | 229 | 11 | 227 | 4.08e-45 | 154 |
| Msa0137980 | AT3G10580.2 | 44.550 | 211 | 93 | 6 | 25 | 234 | 8 | 195 | 1.79e-43 | 147 |
| Msa0137980 | AT3G10580.1 | 44.550 | 211 | 93 | 6 | 25 | 234 | 8 | 195 | 3.71e-43 | 148 |
| Msa0137980 | AT4G09450.1 | 49.102 | 167 | 69 | 3 | 24 | 190 | 6 | 156 | 5.55e-42 | 142 |
| Msa0137980 | AT5G47390.1 | 66.265 | 83 | 26 | 1 | 120 | 202 | 91 | 171 | 5.75e-32 | 120 |
| Msa0137980 | AT5G61620.1 | 51.724 | 116 | 54 | 1 | 80 | 193 | 61 | 176 | 4.58e-29 | 112 |
| Msa0137980 | AT5G56840.1 | 65.432 | 81 | 24 | 2 | 120 | 196 | 86 | 166 | 8.92e-29 | 108 |
| Msa0137980 | AT1G70000.1 | 73.333 | 75 | 20 | 0 | 116 | 190 | 89 | 163 | 1.22e-28 | 109 |
| Msa0137980 | AT1G70000.2 | 73.333 | 75 | 20 | 0 | 116 | 190 | 89 | 163 | 1.22e-28 | 109 |
| Msa0137980 | AT3G16350.1 | 50.000 | 122 | 52 | 3 | 110 | 229 | 125 | 239 | 2.09e-25 | 103 |
| Msa0137980 | AT3G10590.1 | 38.021 | 192 | 106 | 7 | 24 | 208 | 6 | 191 | 6.43e-25 | 98.2 |
| Msa0137980 | AT1G19000.2 | 50.847 | 118 | 51 | 2 | 74 | 191 | 58 | 168 | 8.62e-24 | 97.1 |
| Msa0137980 | AT1G19000.1 | 50.847 | 118 | 51 | 2 | 74 | 191 | 58 | 168 | 8.62e-24 | 97.1 |
| Msa0137980 | AT3G10585.1 | 38.323 | 167 | 67 | 4 | 25 | 190 | 7 | 138 | 1.61e-23 | 93.6 |
| Msa0137980 | AT1G74840.2 | 65.333 | 75 | 26 | 0 | 117 | 191 | 88 | 162 | 7.39e-23 | 93.6 |
| Msa0137980 | AT1G74840.1 | 65.333 | 75 | 26 | 0 | 117 | 191 | 88 | 162 | 1.08e-22 | 94.0 |
| Msa0137980 | AT3G10595.1 | 31.792 | 173 | 85 | 6 | 25 | 195 | 6 | 147 | 1.95e-18 | 80.5 |
| Msa0137980 | AT1G75250.2 | 42.667 | 75 | 41 | 1 | 13 | 87 | 2 | 74 | 1.27e-16 | 73.2 |
| Msa0137980 | AT1G75250.1 | 42.667 | 75 | 41 | 1 | 13 | 87 | 2 | 74 | 2.15e-16 | 73.6 |
| Msa0137980 | AT4G39250.1 | 39.474 | 76 | 46 | 0 | 25 | 100 | 14 | 89 | 1.97e-15 | 70.1 |
| Msa0137980 | AT2G18328.1 | 50.000 | 60 | 30 | 0 | 30 | 89 | 16 | 75 | 3.56e-13 | 63.5 |
| Msa0137980 | AT2G21650.1 | 41.096 | 73 | 43 | 0 | 25 | 97 | 14 | 86 | 3.57e-12 | 61.6 |
| Msa0137980 | AT1G19510.1 | 44.068 | 59 | 33 | 0 | 29 | 87 | 16 | 74 | 4.79e-12 | 61.2 |
| Msa0137980 | AT4G36570.1 | 59.091 | 44 | 18 | 0 | 25 | 68 | 12 | 55 | 3.72e-11 | 57.4 |
Find 91 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTGGGCTGACCAAATT+TGG | 0.115459 | 1_3:+70713652 | Msa0137980:CDS |
| CCAATCTCCTTTCCCAAATT+TGG | 0.134856 | 1_3:-70713665 | None:intergenic |
| CTGTGCAGGCTGTTTCTTAT+TGG | 0.143950 | 1_3:+70713637 | Msa0137980:intron |
| GTAAGTCTGCGACGGAAATT+AGG | 0.198649 | 1_3:+70712590 | Msa0137980:CDS |
| TCTCTTTCTTCACCGAATTC+TGG | 0.216560 | 1_3:-70713765 | None:intergenic |
| GCATATGGGTATTCAAATTA+TGG | 0.241889 | 1_3:+70713949 | Msa0137980:CDS |
| TATAGTTACTTAAAACAAAT+AGG | 0.257836 | 1_3:+70714118 | Msa0137980:three_prime_UTR |
| CTGTGCCTATTGATCAGAAC+TGG | 0.289180 | 1_3:+70713839 | Msa0137980:CDS |
| TGTGCAGGCTGTTTCTTATT+GGG | 0.291908 | 1_3:+70713638 | Msa0137980:intron |
| CCAAATTTGGGAAAGGAGAT+TGG | 0.329445 | 1_3:+70713665 | Msa0137980:CDS |
| CCGCGTCGTGGCGGCGGTGG+TGG | 0.329644 | 1_3:-70712449 | None:intergenic |
| GTTGATAATTAAATTATTAG+TGG | 0.352552 | 1_3:+70714094 | Msa0137980:three_prime_UTR |
| TGATATACTGGAAATTGATT+CGG | 0.359965 | 1_3:+70712636 | Msa0137980:CDS |
| TGGTGGTGGATTGGCTGAAT+GGG | 0.366393 | 1_3:+70712702 | Msa0137980:CDS |
| AGCTTTGGTTCATGATATAC+TGG | 0.372414 | 1_3:+70712624 | Msa0137980:CDS |
| CAGGATCAAATGAGTGCATA+TGG | 0.389179 | 1_3:+70713934 | Msa0137980:CDS |
| ATAGTTACTTAAAACAAATA+GGG | 0.389710 | 1_3:+70714119 | Msa0137980:three_prime_UTR |
| GATGGTGCCGGAGGATTTAC+CGG | 0.392546 | 1_3:+70712534 | Msa0137980:CDS |
| TAGGGATCACTATGAAGCTT+TGG | 0.393734 | 1_3:+70712609 | Msa0137980:CDS |
| GTGGTGGTGGATTGGCTGAA+TGG | 0.393857 | 1_3:+70712701 | Msa0137980:CDS |
| CGGCCACCGCGTCGTGGCGG+CGG | 0.396563 | 1_3:-70712455 | None:intergenic |
| TTATTGGGCTGACCAAATTT+GGG | 0.397453 | 1_3:+70713653 | Msa0137980:CDS |
| TCTTCGAATCAAATTTCGTT+TGG | 0.406289 | 1_3:+70712727 | Msa0137980:CDS |
| AATTGATTCGGGTCGGGTTG+AGG | 0.410540 | 1_3:+70712648 | Msa0137980:CDS |
| GTACTTTCTTCGCCAGAATT+CGG | 0.412820 | 1_3:+70713753 | Msa0137980:CDS |
| CAGAACTGGGTTCCTCCTCC+TGG | 0.418709 | 1_3:+70713853 | Msa0137980:CDS |
| CCACCGCGTCGTGGCGGCGG+TGG | 0.422019 | 1_3:-70712452 | None:intergenic |
| GATATACTGGAAATTGATTC+GGG | 0.424201 | 1_3:+70712637 | Msa0137980:CDS |
| GGAACCCAGTTCTGATCAAT+AGG | 0.426296 | 1_3:-70713844 | None:intergenic |
| GTTCGAGCGAGCTCTGTTGA+TGG | 0.427794 | 1_3:+70712516 | Msa0137980:CDS |
| TAAGTCTGCGACGGAAATTA+GGG | 0.429071 | 1_3:+70712591 | Msa0137980:CDS |
| CTGTGTTCTTCTTCAGTCCA+TGG | 0.441575 | 1_3:-70712796 | None:intergenic |
| TTATCCGTCAAACGATTTGC+AGG | 0.442120 | 1_3:+70713915 | Msa0137980:CDS |
| TGATCCTGCAAATCGTTTGA+CGG | 0.446093 | 1_3:-70713919 | None:intergenic |
| ATTTCCGTCGCAGACTTACC+TGG | 0.452535 | 1_3:-70712586 | None:intergenic |
| TGGGTTCCTCCTCCTGGTGG+TGG | 0.475189 | 1_3:+70713859 | Msa0137980:CDS |
| AAGATCGCGGAACAAGTTCC+AGG | 0.479111 | 1_3:+70712568 | Msa0137980:CDS |
| AAACGACAAAATAGATGTAT+CGG | 0.481957 | 1_3:+70712407 | Msa0137980:exon |
| GCCGAGTTATTCTGATGAAT+CGG | 0.482612 | 1_3:+70712672 | Msa0137980:CDS |
| GAATCGGCTGTGAGTGGTGG+TGG | 0.484996 | 1_3:+70712688 | Msa0137980:CDS |
| ACTGGAAATTGATTCGGGTC+GGG | 0.496104 | 1_3:+70712642 | Msa0137980:CDS |
| GAGATTGGAGAAGCATTTCA+AGG | 0.497665 | 1_3:+70713680 | Msa0137980:CDS |
| GTTGAATTCAAAAGGTGTGA+TGG | 0.505062 | 1_3:-70712379 | None:intergenic |
| GCGATCTTCTCCCACCGGTC+CGG | 0.507834 | 1_3:-70712553 | None:intergenic |
| GGCTGTGAGTGGTGGTGGAT+TGG | 0.511900 | 1_3:+70712693 | Msa0137980:CDS |
| TACTGGAAATTGATTCGGGT+CGG | 0.512665 | 1_3:+70712641 | Msa0137980:CDS |
| CACCGGTCCGGTAAATCCTC+CGG | 0.521987 | 1_3:-70712541 | None:intergenic |
| CCACCACCGCCGCCACGACG+CGG | 0.524799 | 1_3:+70712449 | Msa0137980:CDS |
| GCGAGCTCTGTTGATGGTGC+CGG | 0.528587 | 1_3:+70712522 | Msa0137980:CDS |
| GTATCGGGAGTCAGTTGCTA+TGG | 0.535551 | 1_3:+70712423 | Msa0137980:CDS |
| TGTTGCATTGAACCACCACC+AGG | 0.537371 | 1_3:-70713871 | None:intergenic |
| AACGACAAAATAGATGTATC+GGG | 0.540302 | 1_3:+70712408 | Msa0137980:exon |
| GTCCACTGAGTTGGTTGAGT+CGG | 0.541227 | 1_3:-70712475 | None:intergenic |
| TCGTTATCACCGCCATGTCT+CGG | 0.543106 | 1_3:-70712757 | None:intergenic |
| GGTGATAACGAGAGGAAGAA+AGG | 0.548667 | 1_3:+70712769 | Msa0137980:CDS |
| CGGAGGATTTACCGGACCGG+TGG | 0.556040 | 1_3:+70712542 | Msa0137980:CDS |
| TTTGGTTCGAAGCCGAGACA+TGG | 0.569715 | 1_3:+70712745 | Msa0137980:CDS |
| GTTCCGCGATCTTCTCCCAC+CGG | 0.572597 | 1_3:-70712558 | None:intergenic |
| AACTGGGTTCCTCCTCCTGG+TGG | 0.574702 | 1_3:+70713856 | Msa0137980:CDS |
| GGGCTGACCAAATTTGGGAA+AGG | 0.576808 | 1_3:+70713658 | Msa0137980:CDS |
| CTCGCTCGAACAGCTTGTCA+TGG | 0.578069 | 1_3:-70712504 | None:intergenic |
| CAGTTCTGATCAATAGGCAC+AGG | 0.581958 | 1_3:-70713838 | None:intergenic |
| GCATGGCTAGCCACCTGAGT+TGG | 0.585938 | 1_3:-70713724 | None:intergenic |
| TGCCGGAGGATTTACCGGAC+CGG | 0.588914 | 1_3:+70712539 | Msa0137980:CDS |
| TGGTCTCGAGTCCACTGAGT+TGG | 0.594247 | 1_3:-70712484 | None:intergenic |
| TGTGACAAGAACACCAACTC+AGG | 0.595788 | 1_3:+70713711 | Msa0137980:CDS |
| AGCTCTGTTGATGGTGCCGG+AGG | 0.598113 | 1_3:+70712525 | Msa0137980:CDS |
| AGTCGGCCACCGCGTCGTGG+CGG | 0.599166 | 1_3:-70712458 | None:intergenic |
| AGGATCAAATGAGTGCATAT+GGG | 0.599865 | 1_3:+70713935 | Msa0137980:CDS |
| AGAGGAAGAAAGGAACTCCA+TGG | 0.603418 | 1_3:+70712779 | Msa0137980:CDS |
| AGAATTCGGTGAAGAAAGAG+AGG | 0.605688 | 1_3:+70713767 | Msa0137980:CDS |
| TGTGCCTATTGATCAGAACT+GGG | 0.607519 | 1_3:+70713840 | Msa0137980:CDS |
| TTGAGTCGGCCACCGCGTCG+TGG | 0.614569 | 1_3:-70712461 | None:intergenic |
| CCACCGCCGCCACGACGCGG+TGG | 0.616473 | 1_3:+70712452 | Msa0137980:CDS |
| ATTGAACCACCACCAGGAGG+AGG | 0.621879 | 1_3:-70713865 | None:intergenic |
| TGCTAGTTGACAGAGTAACT+AGG | 0.622724 | 1_3:+70714066 | Msa0137980:three_prime_UTR |
| TCTGATGAATCGGCTGTGAG+TGG | 0.640798 | 1_3:+70712682 | Msa0137980:CDS |
| GGCCGACTCAACCAACTCAG+TGG | 0.643487 | 1_3:+70712473 | Msa0137980:CDS |
| TATTCATGACATTACATCGG+TGG | 0.643904 | 1_3:+70713801 | Msa0137980:CDS |
| GGAGGATTTACCGGACCGGT+GGG | 0.645323 | 1_3:+70712543 | Msa0137980:CDS |
| GACATGGCGGTGATAACGAG+AGG | 0.648245 | 1_3:+70712761 | Msa0137980:CDS |
| GATGAATCGGCTGTGAGTGG+TGG | 0.651355 | 1_3:+70712685 | Msa0137980:CDS |
| AGTTCCAGGTAAGTCTGCGA+CGG | 0.655266 | 1_3:+70712582 | Msa0137980:CDS |
| GGACCGGTGGGAGAAGATCG+CGG | 0.663194 | 1_3:+70712555 | Msa0137980:CDS |
| GACAAGAACACCAACTCAGG+TGG | 0.663453 | 1_3:+70713714 | Msa0137980:CDS |
| GCCGATTCATCAGAATAACT+CGG | 0.668580 | 1_3:-70712673 | None:intergenic |
| AAGTATTCATGACATTACAT+CGG | 0.675179 | 1_3:+70713798 | Msa0137980:CDS |
| GCACTATATACAAAATCACA+CGG | 0.691824 | 1_3:-70713998 | None:intergenic |
| TGCATTGAACCACCACCAGG+AGG | 0.701355 | 1_3:-70713868 | None:intergenic |
| CATGGACTGAAGAAGAACAC+AGG | 0.714829 | 1_3:+70712797 | Msa0137980:CDS |
| GGTTCGAAGCCGAGACATGG+CGG | 0.716484 | 1_3:+70712748 | Msa0137980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTTTTTTTTTTTTTC+TGG | + | chr1_3:70712858-70712877 | Msa0137980:intron | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTCT+GGG | + | chr1_3:70712859-70712878 | Msa0137980:intron | 10.0% |
| !!! | TTTAATTTTAATCTTTTTTG+GGG | + | chr1_3:70712984-70713003 | Msa0137980:intron | 10.0% |
| !!! | TAGTTTTTTTTTTTTTTTTC+TGG | + | chr1_3:70712858-70712877 | Msa0137980:intron | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTCT+GGG | + | chr1_3:70712859-70712878 | Msa0137980:intron | 10.0% |
| !!! | TTTAATTTTAATCTTTTTTG+GGG | + | chr1_3:70712984-70713003 | Msa0137980:intron | 10.0% |
| !! | AAAAGTTATGTTAAAGATAA+AGG | - | chr1_3:70712924-70712943 | None:intergenic | 15.0% |
| !!! | TTATCTTTAACATAACTTTT+TGG | + | chr1_3:70712924-70712943 | Msa0137980:intron | 15.0% |
| !!! | TTAATTTTAATCTTTTTTGG+GGG | + | chr1_3:70712985-70713004 | Msa0137980:intron | 15.0% |
| !!! | GTTGATAATTAAATTATTAG+TGG | + | chr1_3:70714094-70714113 | Msa0137980:three_prime_UTR | 15.0% |
| !! | TATAGTTACTTAAAACAAAT+AGG | + | chr1_3:70714118-70714137 | Msa0137980:three_prime_UTR | 15.0% |
| !! | ATAGTTACTTAAAACAAATA+GGG | + | chr1_3:70714119-70714138 | Msa0137980:three_prime_UTR | 15.0% |
| !! | AAAAGTTATGTTAAAGATAA+AGG | - | chr1_3:70712924-70712943 | None:intergenic | 15.0% |
| !!! | TTATCTTTAACATAACTTTT+TGG | + | chr1_3:70712924-70712943 | Msa0137980:intron | 15.0% |
| !!! | TTAATTTTAATCTTTTTTGG+GGG | + | chr1_3:70712985-70713004 | Msa0137980:intron | 15.0% |
| !!! | GTTGATAATTAAATTATTAG+TGG | + | chr1_3:70714094-70714113 | Msa0137980:three_prime_UTR | 15.0% |
| !! | TATAGTTACTTAAAACAAAT+AGG | + | chr1_3:70714118-70714137 | Msa0137980:three_prime_UTR | 15.0% |
| !! | ATAGTTACTTAAAACAAATA+GGG | + | chr1_3:70714119-70714138 | Msa0137980:three_prime_UTR | 15.0% |
| !!! | TTTTGTTAGTTGAATTCAAA+AGG | - | chr1_3:70712390-70712409 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTGGGTTTAT+TGG | + | chr1_3:70712867-70712886 | Msa0137980:intron | 20.0% |
| !!! | GTTTATTGGTTTTGATTTTA+GGG | + | chr1_3:70712881-70712900 | Msa0137980:intron | 20.0% |
| !!! | TTAACATAACTTTTTGGAAT+TGG | + | chr1_3:70712930-70712949 | Msa0137980:intron | 20.0% |
| !!! | TAATTTTAATCTTTTTTGGG+GGG | + | chr1_3:70712986-70713005 | Msa0137980:intron | 20.0% |
| !! | TACAAAATGTAGTTAAATAG+AGG | + | chr1_3:70713554-70713573 | Msa0137980:intron | 20.0% |
| !!! | TTTTGTTAGTTGAATTCAAA+AGG | - | chr1_3:70712390-70712409 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTGGGTTTAT+TGG | + | chr1_3:70712867-70712886 | Msa0137980:intron | 20.0% |
| !!! | GTTTATTGGTTTTGATTTTA+GGG | + | chr1_3:70712881-70712900 | Msa0137980:intron | 20.0% |
| !!! | TTAACATAACTTTTTGGAAT+TGG | + | chr1_3:70712930-70712949 | Msa0137980:intron | 20.0% |
| !!! | TAATTTTAATCTTTTTTGGG+GGG | + | chr1_3:70712986-70713005 | Msa0137980:intron | 20.0% |
| !! | TACAAAATGTAGTTAAATAG+AGG | + | chr1_3:70713554-70713573 | Msa0137980:intron | 20.0% |
| ! | AAACGACAAAATAGATGTAT+CGG | + | chr1_3:70712407-70712426 | Msa0137980:exon | 25.0% |
| ! | TGATATACTGGAAATTGATT+CGG | + | chr1_3:70712636-70712655 | Msa0137980:CDS | 25.0% |
| !!! | GGTTTATTGGTTTTGATTTT+AGG | + | chr1_3:70712880-70712899 | Msa0137980:intron | 25.0% |
| !! | AATTGGATGCCATAATTTTA+AGG | + | chr1_3:70712947-70712966 | Msa0137980:intron | 25.0% |
| !!! | ATGCCATAATTTTAAGGAAT+GGG | + | chr1_3:70712953-70712972 | Msa0137980:intron | 25.0% |
| ! | ATTCCCATTCCTTAAAATTA+TGG | - | chr1_3:70712959-70712978 | None:intergenic | 25.0% |
| ! | TAAACAATGATGTCAAATAG+CGG | + | chr1_3:70713259-70713278 | Msa0137980:intron | 25.0% |
| ! | ATGTTAAATTGCTATAGTGT+CGG | - | chr1_3:70713414-70713433 | None:intergenic | 25.0% |
| ! | ACTATAGCAATTTAACATAG+CGG | + | chr1_3:70713416-70713435 | Msa0137980:intron | 25.0% |
| ! | AGAATTTGAACAAATCACTT+TGG | + | chr1_3:70713511-70713530 | Msa0137980:intron | 25.0% |
| ! | AAGTATTCATGACATTACAT+CGG | + | chr1_3:70713798-70713817 | Msa0137980:CDS | 25.0% |
| !! | GCATTAGATTTTCATTTATC+TGG | + | chr1_3:70714019-70714038 | Msa0137980:three_prime_UTR | 25.0% |
| !!! | GGTTTTATTTGTGAAGTTTA+TGG | + | chr1_3:70714040-70714059 | Msa0137980:three_prime_UTR | 25.0% |
| !! | AAAACAAATAGGGAACTTTT+AGG | + | chr1_3:70714129-70714148 | Msa0137980:three_prime_UTR | 25.0% |
| ! | AAACGACAAAATAGATGTAT+CGG | + | chr1_3:70712407-70712426 | Msa0137980:exon | 25.0% |
| ! | TGATATACTGGAAATTGATT+CGG | + | chr1_3:70712636-70712655 | Msa0137980:CDS | 25.0% |
| !!! | GGTTTATTGGTTTTGATTTT+AGG | + | chr1_3:70712880-70712899 | Msa0137980:intron | 25.0% |
| !! | AATTGGATGCCATAATTTTA+AGG | + | chr1_3:70712947-70712966 | Msa0137980:intron | 25.0% |
| !!! | ATGCCATAATTTTAAGGAAT+GGG | + | chr1_3:70712953-70712972 | Msa0137980:intron | 25.0% |
| ! | ATTCCCATTCCTTAAAATTA+TGG | - | chr1_3:70712959-70712978 | None:intergenic | 25.0% |
| ! | TAAACAATGATGTCAAATAG+CGG | + | chr1_3:70713259-70713278 | Msa0137980:intron | 25.0% |
| ! | ATGTTAAATTGCTATAGTGT+CGG | - | chr1_3:70713414-70713433 | None:intergenic | 25.0% |
| ! | ACTATAGCAATTTAACATAG+CGG | + | chr1_3:70713416-70713435 | Msa0137980:intron | 25.0% |
| ! | AGAATTTGAACAAATCACTT+TGG | + | chr1_3:70713511-70713530 | Msa0137980:intron | 25.0% |
| ! | AAGTATTCATGACATTACAT+CGG | + | chr1_3:70713798-70713817 | Msa0137980:CDS | 25.0% |
| !! | GCATTAGATTTTCATTTATC+TGG | + | chr1_3:70714019-70714038 | Msa0137980:three_prime_UTR | 25.0% |
| !!! | GGTTTTATTTGTGAAGTTTA+TGG | + | chr1_3:70714040-70714059 | Msa0137980:three_prime_UTR | 25.0% |
| !! | AAAACAAATAGGGAACTTTT+AGG | + | chr1_3:70714129-70714148 | Msa0137980:three_prime_UTR | 25.0% |
| AACGACAAAATAGATGTATC+GGG | + | chr1_3:70712408-70712427 | Msa0137980:exon | 30.0% | |
| ! | GATATACTGGAAATTGATTC+GGG | + | chr1_3:70712637-70712656 | Msa0137980:CDS | 30.0% |
| TCTTCGAATCAAATTTCGTT+TGG | + | chr1_3:70712727-70712746 | Msa0137980:CDS | 30.0% | |
| !! | GATGCCATAATTTTAAGGAA+TGG | + | chr1_3:70712952-70712971 | Msa0137980:intron | 30.0% |
| !! | AGGTTCTAAAAAGTGTATTG+CGG | - | chr1_3:70713333-70713352 | None:intergenic | 30.0% |
| !! | TAGAACCTATCACTTTTGAT+CGG | + | chr1_3:70713345-70713364 | Msa0137980:intron | 30.0% |
| TATTACCGATCAAAAGTGAT+AGG | - | chr1_3:70713353-70713372 | None:intergenic | 30.0% | |
| TACAAAATGTCCTTGAATAG+AGG | + | chr1_3:70713383-70713402 | Msa0137980:intron | 30.0% | |
| ! | CCTTGTTTAACATAAAACAG+CGG | - | chr1_3:70713454-70713473 | None:intergenic | 30.0% |
| ACACTAGCAATTTAACATAG+AGG | + | chr1_3:70713585-70713604 | Msa0137980:intron | 30.0% | |
| AGATAACATAAAATAGTGGC+GGG | - | chr1_3:70713619-70713638 | None:intergenic | 30.0% | |
| CAGATAACATAAAATAGTGG+CGG | - | chr1_3:70713620-70713639 | None:intergenic | 30.0% | |
| GCACAGATAACATAAAATAG+TGG | - | chr1_3:70713623-70713642 | None:intergenic | 30.0% | |
| ! | CTATTTTATGTTATCTGTGC+AGG | + | chr1_3:70713623-70713642 | Msa0137980:intron | 30.0% |
| GCATATGGGTATTCAAATTA+TGG | + | chr1_3:70713949-70713968 | Msa0137980:CDS | 30.0% | |
| GCACTATATACAAAATCACA+CGG | - | chr1_3:70714001-70714020 | None:intergenic | 30.0% | |
| AACGACAAAATAGATGTATC+GGG | + | chr1_3:70712408-70712427 | Msa0137980:exon | 30.0% | |
| ! | GATATACTGGAAATTGATTC+GGG | + | chr1_3:70712637-70712656 | Msa0137980:CDS | 30.0% |
| TCTTCGAATCAAATTTCGTT+TGG | + | chr1_3:70712727-70712746 | Msa0137980:CDS | 30.0% | |
| !! | GATGCCATAATTTTAAGGAA+TGG | + | chr1_3:70712952-70712971 | Msa0137980:intron | 30.0% |
| !! | AGGTTCTAAAAAGTGTATTG+CGG | - | chr1_3:70713333-70713352 | None:intergenic | 30.0% |
| !! | TAGAACCTATCACTTTTGAT+CGG | + | chr1_3:70713345-70713364 | Msa0137980:intron | 30.0% |
| TATTACCGATCAAAAGTGAT+AGG | - | chr1_3:70713353-70713372 | None:intergenic | 30.0% | |
| TACAAAATGTCCTTGAATAG+AGG | + | chr1_3:70713383-70713402 | Msa0137980:intron | 30.0% | |
| ! | CCTTGTTTAACATAAAACAG+CGG | - | chr1_3:70713454-70713473 | None:intergenic | 30.0% |
| ACACTAGCAATTTAACATAG+AGG | + | chr1_3:70713585-70713604 | Msa0137980:intron | 30.0% | |
| AGATAACATAAAATAGTGGC+GGG | - | chr1_3:70713619-70713638 | None:intergenic | 30.0% | |
| CAGATAACATAAAATAGTGG+CGG | - | chr1_3:70713620-70713639 | None:intergenic | 30.0% | |
| GCACAGATAACATAAAATAG+TGG | - | chr1_3:70713623-70713642 | None:intergenic | 30.0% | |
| ! | CTATTTTATGTTATCTGTGC+AGG | + | chr1_3:70713623-70713642 | Msa0137980:intron | 30.0% |
| GCATATGGGTATTCAAATTA+TGG | + | chr1_3:70713949-70713968 | Msa0137980:CDS | 30.0% | |
| GCACTATATACAAAATCACA+CGG | - | chr1_3:70714001-70714020 | None:intergenic | 30.0% | |
| ! | GTTGAATTCAAAAGGTGTGA+TGG | - | chr1_3:70712382-70712401 | None:intergenic | 35.0% |
| ! | AGCTTTGGTTCATGATATAC+TGG | + | chr1_3:70712624-70712643 | Msa0137980:CDS | 35.0% |
| ! | GTCTAAACCCTCAAATTTTG+TGG | + | chr1_3:70713191-70713210 | Msa0137980:intron | 35.0% |
| GAGCAAACCACAAAATTTGA+GGG | - | chr1_3:70713201-70713220 | None:intergenic | 35.0% | |
| TGAGCAAACCACAAAATTTG+AGG | - | chr1_3:70713202-70713221 | None:intergenic | 35.0% | |
| GTTTAACATAAAACAGCGGT+GGG | - | chr1_3:70713450-70713469 | None:intergenic | 35.0% | |
| TGTTTAACATAAAACAGCGG+TGG | - | chr1_3:70713451-70713470 | None:intergenic | 35.0% | |
| !! | CCGCTGTTTTATGTTAAACA+AGG | + | chr1_3:70713451-70713470 | Msa0137980:intron | 35.0% |
| TGTTAAACAAGGATGTCAAG+TGG | + | chr1_3:70713462-70713481 | Msa0137980:intron | 35.0% | |
| TTATTGGGCTGACCAAATTT+GGG | + | chr1_3:70713653-70713672 | Msa0137980:CDS | 35.0% | |
| !!! | GAAGAAAGTACTTTTGAGCA+TGG | - | chr1_3:70713744-70713763 | None:intergenic | 35.0% |
| TATTCATGACATTACATCGG+TGG | + | chr1_3:70713801-70713820 | Msa0137980:CDS | 35.0% | |
| AGGATCAAATGAGTGCATAT+GGG | + | chr1_3:70713935-70713954 | Msa0137980:CDS | 35.0% | |
| ! | GTTGAATTCAAAAGGTGTGA+TGG | - | chr1_3:70712382-70712401 | None:intergenic | 35.0% |
| ! | AGCTTTGGTTCATGATATAC+TGG | + | chr1_3:70712624-70712643 | Msa0137980:CDS | 35.0% |
| ! | GTCTAAACCCTCAAATTTTG+TGG | + | chr1_3:70713191-70713210 | Msa0137980:intron | 35.0% |
| GAGCAAACCACAAAATTTGA+GGG | - | chr1_3:70713201-70713220 | None:intergenic | 35.0% | |
| TGAGCAAACCACAAAATTTG+AGG | - | chr1_3:70713202-70713221 | None:intergenic | 35.0% | |
| GTTTAACATAAAACAGCGGT+GGG | - | chr1_3:70713450-70713469 | None:intergenic | 35.0% | |
| TGTTTAACATAAAACAGCGG+TGG | - | chr1_3:70713451-70713470 | None:intergenic | 35.0% | |
| !! | CCGCTGTTTTATGTTAAACA+AGG | + | chr1_3:70713451-70713470 | Msa0137980:intron | 35.0% |
| TGTTAAACAAGGATGTCAAG+TGG | + | chr1_3:70713462-70713481 | Msa0137980:intron | 35.0% | |
| TTATTGGGCTGACCAAATTT+GGG | + | chr1_3:70713653-70713672 | Msa0137980:CDS | 35.0% | |
| !!! | GAAGAAAGTACTTTTGAGCA+TGG | - | chr1_3:70713744-70713763 | None:intergenic | 35.0% |
| TATTCATGACATTACATCGG+TGG | + | chr1_3:70713801-70713820 | Msa0137980:CDS | 35.0% | |
| AGGATCAAATGAGTGCATAT+GGG | + | chr1_3:70713935-70713954 | Msa0137980:CDS | 35.0% | |
| TAAGTCTGCGACGGAAATTA+GGG | + | chr1_3:70712591-70712610 | Msa0137980:CDS | 40.0% | |
| TAGGGATCACTATGAAGCTT+TGG | + | chr1_3:70712609-70712628 | Msa0137980:CDS | 40.0% | |
| !! | TACTGGAAATTGATTCGGGT+CGG | + | chr1_3:70712641-70712660 | Msa0137980:CDS | 40.0% |
| GCCGAGTTATTCTGATGAAT+CGG | + | chr1_3:70712672-70712691 | Msa0137980:CDS | 40.0% | |
| ! | GCCGATTCATCAGAATAACT+CGG | - | chr1_3:70712676-70712695 | None:intergenic | 40.0% |
| !!! | AATCTTTTTTGGGGGGTTTC+TGG | + | chr1_3:70712993-70713012 | Msa0137980:intron | 40.0% |
| !!! | ATCTTTTTTGGGGGGTTTCT+GGG | + | chr1_3:70712994-70713013 | Msa0137980:intron | 40.0% |
| TAAACAAGGATGTCAAGTGG+CGG | + | chr1_3:70713465-70713484 | Msa0137980:intron | 40.0% | |
| !! | TGTGCAGGCTGTTTCTTATT+GGG | + | chr1_3:70713638-70713657 | Msa0137980:intron | 40.0% |
| CTTATTGGGCTGACCAAATT+TGG | + | chr1_3:70713652-70713671 | Msa0137980:CDS | 40.0% | |
| CCAATCTCCTTTCCCAAATT+TGG | - | chr1_3:70713668-70713687 | None:intergenic | 40.0% | |
| CCAAATTTGGGAAAGGAGAT+TGG | + | chr1_3:70713665-70713684 | Msa0137980:CDS | 40.0% | |
| !! | GAGATTGGAGAAGCATTTCA+AGG | + | chr1_3:70713680-70713699 | Msa0137980:CDS | 40.0% |
| GTACTTTCTTCGCCAGAATT+CGG | + | chr1_3:70713753-70713772 | Msa0137980:CDS | 40.0% | |
| TCTCTTTCTTCACCGAATTC+TGG | - | chr1_3:70713768-70713787 | None:intergenic | 40.0% | |
| ! | AGAATTCGGTGAAGAAAGAG+AGG | + | chr1_3:70713767-70713786 | Msa0137980:CDS | 40.0% |
| TGTGCCTATTGATCAGAACT+GGG | + | chr1_3:70713840-70713859 | Msa0137980:CDS | 40.0% | |
| TTATCCGTCAAACGATTTGC+AGG | + | chr1_3:70713915-70713934 | Msa0137980:CDS | 40.0% | |
| TGATCCTGCAAATCGTTTGA+CGG | - | chr1_3:70713922-70713941 | None:intergenic | 40.0% | |
| CAGGATCAAATGAGTGCATA+TGG | + | chr1_3:70713934-70713953 | Msa0137980:CDS | 40.0% | |
| TGCTAGTTGACAGAGTAACT+AGG | + | chr1_3:70714066-70714085 | Msa0137980:three_prime_UTR | 40.0% | |
| TAAGTCTGCGACGGAAATTA+GGG | + | chr1_3:70712591-70712610 | Msa0137980:CDS | 40.0% | |
| TAGGGATCACTATGAAGCTT+TGG | + | chr1_3:70712609-70712628 | Msa0137980:CDS | 40.0% | |
| !! | TACTGGAAATTGATTCGGGT+CGG | + | chr1_3:70712641-70712660 | Msa0137980:CDS | 40.0% |
| GCCGAGTTATTCTGATGAAT+CGG | + | chr1_3:70712672-70712691 | Msa0137980:CDS | 40.0% | |
| ! | GCCGATTCATCAGAATAACT+CGG | - | chr1_3:70712676-70712695 | None:intergenic | 40.0% |
| !!! | AATCTTTTTTGGGGGGTTTC+TGG | + | chr1_3:70712993-70713012 | Msa0137980:intron | 40.0% |
| !!! | ATCTTTTTTGGGGGGTTTCT+GGG | + | chr1_3:70712994-70713013 | Msa0137980:intron | 40.0% |
| TAAACAAGGATGTCAAGTGG+CGG | + | chr1_3:70713465-70713484 | Msa0137980:intron | 40.0% | |
| !! | TGTGCAGGCTGTTTCTTATT+GGG | + | chr1_3:70713638-70713657 | Msa0137980:intron | 40.0% |
| CTTATTGGGCTGACCAAATT+TGG | + | chr1_3:70713652-70713671 | Msa0137980:CDS | 40.0% | |
| CCAATCTCCTTTCCCAAATT+TGG | - | chr1_3:70713668-70713687 | None:intergenic | 40.0% | |
| CCAAATTTGGGAAAGGAGAT+TGG | + | chr1_3:70713665-70713684 | Msa0137980:CDS | 40.0% | |
| !! | GAGATTGGAGAAGCATTTCA+AGG | + | chr1_3:70713680-70713699 | Msa0137980:CDS | 40.0% |
| GTACTTTCTTCGCCAGAATT+CGG | + | chr1_3:70713753-70713772 | Msa0137980:CDS | 40.0% | |
| TCTCTTTCTTCACCGAATTC+TGG | - | chr1_3:70713768-70713787 | None:intergenic | 40.0% | |
| ! | AGAATTCGGTGAAGAAAGAG+AGG | + | chr1_3:70713767-70713786 | Msa0137980:CDS | 40.0% |
| TGTGCCTATTGATCAGAACT+GGG | + | chr1_3:70713840-70713859 | Msa0137980:CDS | 40.0% | |
| TTATCCGTCAAACGATTTGC+AGG | + | chr1_3:70713915-70713934 | Msa0137980:CDS | 40.0% | |
| TGATCCTGCAAATCGTTTGA+CGG | - | chr1_3:70713922-70713941 | None:intergenic | 40.0% | |
| CAGGATCAAATGAGTGCATA+TGG | + | chr1_3:70713934-70713953 | Msa0137980:CDS | 40.0% | |
| TGCTAGTTGACAGAGTAACT+AGG | + | chr1_3:70714066-70714085 | Msa0137980:three_prime_UTR | 40.0% | |
| GTAAGTCTGCGACGGAAATT+AGG | + | chr1_3:70712590-70712609 | Msa0137980:CDS | 45.0% | |
| !! | ACTGGAAATTGATTCGGGTC+GGG | + | chr1_3:70712642-70712661 | Msa0137980:CDS | 45.0% |
| ! | GGTGATAACGAGAGGAAGAA+AGG | + | chr1_3:70712769-70712788 | Msa0137980:CDS | 45.0% |
| AGAGGAAGAAAGGAACTCCA+TGG | + | chr1_3:70712779-70712798 | Msa0137980:CDS | 45.0% | |
| CTGTGTTCTTCTTCAGTCCA+TGG | - | chr1_3:70712799-70712818 | None:intergenic | 45.0% | |
| ! | CATGGACTGAAGAAGAACAC+AGG | + | chr1_3:70712797-70712816 | Msa0137980:CDS | 45.0% |
| ATGTCAAATAGCGGTTGCAG+TGG | + | chr1_3:70713268-70713287 | Msa0137980:intron | 45.0% | |
| GTCGGTATAGCCTCTATTCA+AGG | - | chr1_3:70713396-70713415 | None:intergenic | 45.0% | |
| !! | CTGTGCAGGCTGTTTCTTAT+TGG | + | chr1_3:70713637-70713656 | Msa0137980:intron | 45.0% |
| TGTGACAAGAACACCAACTC+AGG | + | chr1_3:70713711-70713730 | Msa0137980:CDS | 45.0% | |
| ! | CAGTTCTGATCAATAGGCAC+AGG | - | chr1_3:70713841-70713860 | None:intergenic | 45.0% |
| CTGTGCCTATTGATCAGAAC+TGG | + | chr1_3:70713839-70713858 | Msa0137980:CDS | 45.0% | |
| ! | GGAACCCAGTTCTGATCAAT+AGG | - | chr1_3:70713847-70713866 | None:intergenic | 45.0% |
| GTAAGTCTGCGACGGAAATT+AGG | + | chr1_3:70712590-70712609 | Msa0137980:CDS | 45.0% | |
| !! | ACTGGAAATTGATTCGGGTC+GGG | + | chr1_3:70712642-70712661 | Msa0137980:CDS | 45.0% |
| ! | GGTGATAACGAGAGGAAGAA+AGG | + | chr1_3:70712769-70712788 | Msa0137980:CDS | 45.0% |
| AGAGGAAGAAAGGAACTCCA+TGG | + | chr1_3:70712779-70712798 | Msa0137980:CDS | 45.0% | |
| CTGTGTTCTTCTTCAGTCCA+TGG | - | chr1_3:70712799-70712818 | None:intergenic | 45.0% | |
| ! | CATGGACTGAAGAAGAACAC+AGG | + | chr1_3:70712797-70712816 | Msa0137980:CDS | 45.0% |
| ATGTCAAATAGCGGTTGCAG+TGG | + | chr1_3:70713268-70713287 | Msa0137980:intron | 45.0% | |
| GTCGGTATAGCCTCTATTCA+AGG | - | chr1_3:70713396-70713415 | None:intergenic | 45.0% | |
| !! | CTGTGCAGGCTGTTTCTTAT+TGG | + | chr1_3:70713637-70713656 | Msa0137980:intron | 45.0% |
| TGTGACAAGAACACCAACTC+AGG | + | chr1_3:70713711-70713730 | Msa0137980:CDS | 45.0% | |
| ! | CAGTTCTGATCAATAGGCAC+AGG | - | chr1_3:70713841-70713860 | None:intergenic | 45.0% |
| CTGTGCCTATTGATCAGAAC+TGG | + | chr1_3:70713839-70713858 | Msa0137980:CDS | 45.0% | |
| ! | GGAACCCAGTTCTGATCAAT+AGG | - | chr1_3:70713847-70713866 | None:intergenic | 45.0% |
| !!! | AATTTAATTTTAATCTTTTT+TGG | + | chr1_3:70712982-70713001 | Msa0137980:intron | 5.0% |
| !!! | ATTTAATTTTAATCTTTTTT+GGG | + | chr1_3:70712983-70713002 | Msa0137980:intron | 5.0% |
| !! | CAAAAAAAAAAAAAAAAAAA+CGG | + | chr1_3:70713225-70713244 | Msa0137980:intron | 5.0% |
| !!! | AATTTAATTTTAATCTTTTT+TGG | + | chr1_3:70712982-70713001 | Msa0137980:intron | 5.0% |
| !!! | ATTTAATTTTAATCTTTTTT+GGG | + | chr1_3:70712983-70713002 | Msa0137980:intron | 5.0% |
| !! | CAAAAAAAAAAAAAAAAAAA+CGG | + | chr1_3:70713225-70713244 | Msa0137980:intron | 5.0% |
| GTATCGGGAGTCAGTTGCTA+TGG | + | chr1_3:70712423-70712442 | Msa0137980:CDS | 50.0% | |
| !! | GTCCACTGAGTTGGTTGAGT+CGG | - | chr1_3:70712478-70712497 | None:intergenic | 50.0% |
| AAGATCGCGGAACAAGTTCC+AGG | + | chr1_3:70712568-70712587 | Msa0137980:CDS | 50.0% | |
| AGTTCCAGGTAAGTCTGCGA+CGG | + | chr1_3:70712582-70712601 | Msa0137980:CDS | 50.0% | |
| ATTTCCGTCGCAGACTTACC+TGG | - | chr1_3:70712589-70712608 | None:intergenic | 50.0% | |
| !! | AATTGATTCGGGTCGGGTTG+AGG | + | chr1_3:70712648-70712667 | Msa0137980:CDS | 50.0% |
| TCTGATGAATCGGCTGTGAG+TGG | + | chr1_3:70712682-70712701 | Msa0137980:CDS | 50.0% | |
| !! | TGGTGGTGGATTGGCTGAAT+GGG | + | chr1_3:70712702-70712721 | Msa0137980:CDS | 50.0% |
| ! | TTTGGTTCGAAGCCGAGACA+TGG | + | chr1_3:70712745-70712764 | Msa0137980:CDS | 50.0% |
| TCGTTATCACCGCCATGTCT+CGG | - | chr1_3:70712760-70712779 | None:intergenic | 50.0% | |
| GGGCTGACCAAATTTGGGAA+AGG | + | chr1_3:70713658-70713677 | Msa0137980:CDS | 50.0% | |
| GACAAGAACACCAACTCAGG+TGG | + | chr1_3:70713714-70713733 | Msa0137980:CDS | 50.0% | |
| TGTTGCATTGAACCACCACC+AGG | - | chr1_3:70713874-70713893 | None:intergenic | 50.0% | |
| GTATCGGGAGTCAGTTGCTA+TGG | + | chr1_3:70712423-70712442 | Msa0137980:CDS | 50.0% | |
| !! | GTCCACTGAGTTGGTTGAGT+CGG | - | chr1_3:70712478-70712497 | None:intergenic | 50.0% |
| AAGATCGCGGAACAAGTTCC+AGG | + | chr1_3:70712568-70712587 | Msa0137980:CDS | 50.0% | |
| AGTTCCAGGTAAGTCTGCGA+CGG | + | chr1_3:70712582-70712601 | Msa0137980:CDS | 50.0% | |
| ATTTCCGTCGCAGACTTACC+TGG | - | chr1_3:70712589-70712608 | None:intergenic | 50.0% | |
| !! | AATTGATTCGGGTCGGGTTG+AGG | + | chr1_3:70712648-70712667 | Msa0137980:CDS | 50.0% |
| TCTGATGAATCGGCTGTGAG+TGG | + | chr1_3:70712682-70712701 | Msa0137980:CDS | 50.0% | |
| !! | TGGTGGTGGATTGGCTGAAT+GGG | + | chr1_3:70712702-70712721 | Msa0137980:CDS | 50.0% |
| ! | TTTGGTTCGAAGCCGAGACA+TGG | + | chr1_3:70712745-70712764 | Msa0137980:CDS | 50.0% |
| TCGTTATCACCGCCATGTCT+CGG | - | chr1_3:70712760-70712779 | None:intergenic | 50.0% | |
| GGGCTGACCAAATTTGGGAA+AGG | + | chr1_3:70713658-70713677 | Msa0137980:CDS | 50.0% | |
| GACAAGAACACCAACTCAGG+TGG | + | chr1_3:70713714-70713733 | Msa0137980:CDS | 50.0% | |
| TGTTGCATTGAACCACCACC+AGG | - | chr1_3:70713874-70713893 | None:intergenic | 50.0% | |
| TGGTCTCGAGTCCACTGAGT+TGG | - | chr1_3:70712487-70712506 | None:intergenic | 55.0% | |
| CTCGCTCGAACAGCTTGTCA+TGG | - | chr1_3:70712507-70712526 | None:intergenic | 55.0% | |
| GTTCGAGCGAGCTCTGTTGA+TGG | + | chr1_3:70712516-70712535 | Msa0137980:CDS | 55.0% | |
| ! | GATGGTGCCGGAGGATTTAC+CGG | + | chr1_3:70712534-70712553 | Msa0137980:CDS | 55.0% |
| GATGAATCGGCTGTGAGTGG+TGG | + | chr1_3:70712685-70712704 | Msa0137980:CDS | 55.0% | |
| !! | GTGGTGGTGGATTGGCTGAA+TGG | + | chr1_3:70712701-70712720 | Msa0137980:CDS | 55.0% |
| ! | GACATGGCGGTGATAACGAG+AGG | + | chr1_3:70712761-70712780 | Msa0137980:CDS | 55.0% |
| ATTGAACCACCACCAGGAGG+AGG | - | chr1_3:70713868-70713887 | None:intergenic | 55.0% | |
| TGCATTGAACCACCACCAGG+AGG | - | chr1_3:70713871-70713890 | None:intergenic | 55.0% | |
| TGGTCTCGAGTCCACTGAGT+TGG | - | chr1_3:70712487-70712506 | None:intergenic | 55.0% | |
| CTCGCTCGAACAGCTTGTCA+TGG | - | chr1_3:70712507-70712526 | None:intergenic | 55.0% | |
| GTTCGAGCGAGCTCTGTTGA+TGG | + | chr1_3:70712516-70712535 | Msa0137980:CDS | 55.0% | |
| ! | GATGGTGCCGGAGGATTTAC+CGG | + | chr1_3:70712534-70712553 | Msa0137980:CDS | 55.0% |
| GATGAATCGGCTGTGAGTGG+TGG | + | chr1_3:70712685-70712704 | Msa0137980:CDS | 55.0% | |
| !! | GTGGTGGTGGATTGGCTGAA+TGG | + | chr1_3:70712701-70712720 | Msa0137980:CDS | 55.0% |
| ! | GACATGGCGGTGATAACGAG+AGG | + | chr1_3:70712761-70712780 | Msa0137980:CDS | 55.0% |
| ATTGAACCACCACCAGGAGG+AGG | - | chr1_3:70713868-70713887 | None:intergenic | 55.0% | |
| TGCATTGAACCACCACCAGG+AGG | - | chr1_3:70713871-70713890 | None:intergenic | 55.0% | |
| ! | GGCCGACTCAACCAACTCAG+TGG | + | chr1_3:70712473-70712492 | Msa0137980:CDS | 60.0% |
| !! | GCGAGCTCTGTTGATGGTGC+CGG | + | chr1_3:70712522-70712541 | Msa0137980:CDS | 60.0% |
| !! | AGCTCTGTTGATGGTGCCGG+AGG | + | chr1_3:70712525-70712544 | Msa0137980:CDS | 60.0% |
| TGCCGGAGGATTTACCGGAC+CGG | + | chr1_3:70712539-70712558 | Msa0137980:CDS | 60.0% | |
| CACCGGTCCGGTAAATCCTC+CGG | - | chr1_3:70712544-70712563 | None:intergenic | 60.0% | |
| GGAGGATTTACCGGACCGGT+GGG | + | chr1_3:70712543-70712562 | Msa0137980:CDS | 60.0% | |
| GTTCCGCGATCTTCTCCCAC+CGG | - | chr1_3:70712561-70712580 | None:intergenic | 60.0% | |
| GAATCGGCTGTGAGTGGTGG+TGG | + | chr1_3:70712688-70712707 | Msa0137980:CDS | 60.0% | |
| !! | GGCTGTGAGTGGTGGTGGAT+TGG | + | chr1_3:70712693-70712712 | Msa0137980:CDS | 60.0% |
| GGTTCGAAGCCGAGACATGG+CGG | + | chr1_3:70712748-70712767 | Msa0137980:CDS | 60.0% | |
| ! | GCATGGCTAGCCACCTGAGT+TGG | - | chr1_3:70713727-70713746 | None:intergenic | 60.0% |
| CAGAACTGGGTTCCTCCTCC+TGG | + | chr1_3:70713853-70713872 | Msa0137980:CDS | 60.0% | |
| AACTGGGTTCCTCCTCCTGG+TGG | + | chr1_3:70713856-70713875 | Msa0137980:CDS | 60.0% | |
| ! | GGCCGACTCAACCAACTCAG+TGG | + | chr1_3:70712473-70712492 | Msa0137980:CDS | 60.0% |
| !! | GCGAGCTCTGTTGATGGTGC+CGG | + | chr1_3:70712522-70712541 | Msa0137980:CDS | 60.0% |
| !! | AGCTCTGTTGATGGTGCCGG+AGG | + | chr1_3:70712525-70712544 | Msa0137980:CDS | 60.0% |
| TGCCGGAGGATTTACCGGAC+CGG | + | chr1_3:70712539-70712558 | Msa0137980:CDS | 60.0% | |
| CACCGGTCCGGTAAATCCTC+CGG | - | chr1_3:70712544-70712563 | None:intergenic | 60.0% | |
| GGAGGATTTACCGGACCGGT+GGG | + | chr1_3:70712543-70712562 | Msa0137980:CDS | 60.0% | |
| GTTCCGCGATCTTCTCCCAC+CGG | - | chr1_3:70712561-70712580 | None:intergenic | 60.0% | |
| GAATCGGCTGTGAGTGGTGG+TGG | + | chr1_3:70712688-70712707 | Msa0137980:CDS | 60.0% | |
| !! | GGCTGTGAGTGGTGGTGGAT+TGG | + | chr1_3:70712693-70712712 | Msa0137980:CDS | 60.0% |
| GGTTCGAAGCCGAGACATGG+CGG | + | chr1_3:70712748-70712767 | Msa0137980:CDS | 60.0% | |
| ! | GCATGGCTAGCCACCTGAGT+TGG | - | chr1_3:70713727-70713746 | None:intergenic | 60.0% |
| CAGAACTGGGTTCCTCCTCC+TGG | + | chr1_3:70713853-70713872 | Msa0137980:CDS | 60.0% | |
| AACTGGGTTCCTCCTCCTGG+TGG | + | chr1_3:70713856-70713875 | Msa0137980:CDS | 60.0% | |
| CGGAGGATTTACCGGACCGG+TGG | + | chr1_3:70712542-70712561 | Msa0137980:CDS | 65.0% | |
| GCGATCTTCTCCCACCGGTC+CGG | - | chr1_3:70712556-70712575 | None:intergenic | 65.0% | |
| GGACCGGTGGGAGAAGATCG+CGG | + | chr1_3:70712555-70712574 | Msa0137980:CDS | 65.0% | |
| TGGGTTCCTCCTCCTGGTGG+TGG | + | chr1_3:70713859-70713878 | Msa0137980:CDS | 65.0% | |
| CGGAGGATTTACCGGACCGG+TGG | + | chr1_3:70712542-70712561 | Msa0137980:CDS | 65.0% | |
| GCGATCTTCTCCCACCGGTC+CGG | - | chr1_3:70712556-70712575 | None:intergenic | 65.0% | |
| GGACCGGTGGGAGAAGATCG+CGG | + | chr1_3:70712555-70712574 | Msa0137980:CDS | 65.0% | |
| TGGGTTCCTCCTCCTGGTGG+TGG | + | chr1_3:70713859-70713878 | Msa0137980:CDS | 65.0% | |
| TTGAGTCGGCCACCGCGTCG+TGG | - | chr1_3:70712464-70712483 | None:intergenic | 70.0% | |
| TTGAGTCGGCCACCGCGTCG+TGG | - | chr1_3:70712464-70712483 | None:intergenic | 70.0% | |
| AGTCGGCCACCGCGTCGTGG+CGG | - | chr1_3:70712461-70712480 | None:intergenic | 75.0% | |
| AGTCGGCCACCGCGTCGTGG+CGG | - | chr1_3:70712461-70712480 | None:intergenic | 75.0% | |
| ! | CCACCACCGCCGCCACGACG+CGG | + | chr1_3:70712449-70712468 | Msa0137980:CDS | 80.0% |
| ! | CCACCACCGCCGCCACGACG+CGG | + | chr1_3:70712449-70712468 | Msa0137980:CDS | 80.0% |
| ! | CCGCGTCGTGGCGGCGGTGG+TGG | - | chr1_3:70712452-70712471 | None:intergenic | 85.0% |
| ! | CCACCGCGTCGTGGCGGCGG+TGG | - | chr1_3:70712455-70712474 | None:intergenic | 85.0% |
| ! | CCACCGCCGCCACGACGCGG+TGG | + | chr1_3:70712452-70712471 | Msa0137980:CDS | 85.0% |
| ! | CGGCCACCGCGTCGTGGCGG+CGG | - | chr1_3:70712458-70712477 | None:intergenic | 85.0% |
| ! | CCGCGTCGTGGCGGCGGTGG+TGG | - | chr1_3:70712452-70712471 | None:intergenic | 85.0% |
| ! | CCACCGCGTCGTGGCGGCGG+TGG | - | chr1_3:70712455-70712474 | None:intergenic | 85.0% |
| ! | CCACCGCCGCCACGACGCGG+TGG | + | chr1_3:70712452-70712471 | Msa0137980:CDS | 85.0% |
| ! | CGGCCACCGCGTCGTGGCGG+CGG | - | chr1_3:70712458-70712477 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 70712306 | 70714197 | 70712306 | ID=Msa0137980;Name=Msa0137980 |
| chr1_3 | mRNA | 70712306 | 70714197 | 70712306 | ID=Msa0137980-mRNA-1;Parent=Msa0137980;Name=Msa0137980-mRNA-1;_AED=0.01;_eAED=0.01;_QI=115|1|1|1|1|1|2|213|245 |
| chr1_3 | exon | 70712306 | 70712818 | 70712306 | ID=Msa0137980-mRNA-1:exon:24538;Parent=Msa0137980-mRNA-1 |
| chr1_3 | exon | 70713645 | 70714197 | 70713645 | ID=Msa0137980-mRNA-1:exon:24539;Parent=Msa0137980-mRNA-1 |
| chr1_3 | five_prime_UTR | 70712306 | 70712420 | 70712306 | ID=Msa0137980-mRNA-1:five_prime_utr;Parent=Msa0137980-mRNA-1 |
| chr1_3 | CDS | 70712421 | 70712818 | 70712421 | ID=Msa0137980-mRNA-1:cds;Parent=Msa0137980-mRNA-1 |
| chr1_3 | CDS | 70713645 | 70713984 | 70713645 | ID=Msa0137980-mRNA-1:cds;Parent=Msa0137980-mRNA-1 |
| chr1_3 | three_prime_UTR | 70713985 | 70714197 | 70713985 | ID=Msa0137980-mRNA-1:three_prime_utr;Parent=Msa0137980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
