Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043850 | sp|Q9FNN6|SRM1_ARATH | 54.545 | 187 | 69 | 3 | 25 | 200 | 12 | 193 | 2.08e-59 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0043850 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0043850 | -0.802374 | 5.784194e-49 | -8.615850e-47 |
| Msa0004480 | Msa0043850 | 0.861904 | 7.391818e-64 | -8.615850e-47 |
| Msa0011050 | Msa0043850 | 0.835298 | 1.819990e-56 | -8.615850e-47 |
| Msa0026630 | Msa0043850 | 0.829399 | 5.260069e-55 | -8.615850e-47 |
| Msa0033840 | Msa0043850 | -0.819881 | 9.199597e-53 | -8.615850e-47 |
| Msa0043850 | Msa0051960 | 0.801131 | 1.040790e-48 | -8.615850e-47 |
| Msa0043850 | Msa0052360 | 0.811915 | 5.513041e-51 | -8.615850e-47 |
| Msa0043850 | Msa0061220 | 0.849821 | 2.527471e-60 | -8.615850e-47 |
| Msa0043850 | Msa0077370 | 0.847471 | 1.132666e-59 | -8.615850e-47 |
| Msa0043850 | Msa0081610 | -0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0043850 | Msa0082230 | 0.834164 | 3.512147e-56 | -8.615850e-47 |
| Msa0043850 | Msa0082420 | 0.861403 | 1.051416e-63 | -8.615850e-47 |
| Msa0043850 | Msa0089730 | 0.801573 | 8.449962e-49 | -8.615850e-47 |
| Msa0043850 | Msa0090510 | 0.957687 | 1.483877e-115 | -8.615850e-47 |
| Msa0043850 | Msa0094710 | 0.822575 | 2.201034e-53 | -8.615850e-47 |
| Msa0043850 | Msa0097370 | 0.802914 | 4.473958e-49 | -8.615850e-47 |
| Msa0043850 | Msa0101960 | 0.810513 | 1.110506e-50 | -8.615850e-47 |
| Msa0043850 | Msa0117520 | 0.808547 | 2.935771e-50 | -8.615850e-47 |
| Msa0043850 | Msa0136630 | 0.842716 | 2.182361e-58 | -8.615850e-47 |
| Msa0043850 | Msa0137980 | 0.995530 | 3.378636e-217 | -8.615850e-47 |
| Msa0043850 | Msa0138900 | 0.848808 | 4.839503e-60 | -8.615850e-47 |
| Msa0043850 | Msa0139670 | 0.810205 | 1.294181e-50 | -8.615850e-47 |
| Msa0043850 | Msa0147790 | 0.806270 | 8.925079e-50 | -8.615850e-47 |
| Msa0043850 | Msa0151220 | 0.837722 | 4.395563e-57 | -8.615850e-47 |
| Msa0043850 | Msa0160960 | 0.805439 | 1.334231e-49 | -8.615850e-47 |
| Msa0043850 | Msa0174100 | 0.800522 | 1.385647e-48 | -8.615850e-47 |
| Msa0043850 | Msa0174820 | 0.801959 | 7.038661e-49 | -8.615850e-47 |
| Msa0043850 | Msa0176260 | 0.823060 | 1.697656e-53 | -8.615850e-47 |
| Msa0043850 | Msa0183910 | 0.958321 | 3.147510e-116 | -8.615850e-47 |
| Msa0043850 | Msa0213430 | 0.820925 | 5.299992e-53 | -8.615850e-47 |
| Msa0043850 | Msa0220400 | -0.801060 | 1.075973e-48 | -8.615850e-47 |
| Msa0043850 | Msa0223140 | 0.801741 | 7.802523e-49 | -8.615850e-47 |
| Msa0043850 | Msa0224130 | 0.838861 | 2.235589e-57 | -8.615850e-47 |
| Msa0043850 | Msa0234090 | 0.808592 | 2.871134e-50 | -8.615850e-47 |
| Msa0043850 | Msa0240270 | 0.812264 | 4.627815e-51 | -8.615850e-47 |
| Msa0043850 | Msa0241480 | 0.805510 | 1.289488e-49 | -8.615850e-47 |
| Msa0043850 | Msa0259440 | 0.842670 | 2.243500e-58 | -8.615850e-47 |
| Msa0043850 | Msa0259580 | 0.829266 | 5.668388e-55 | -8.615850e-47 |
| Msa0043850 | Msa0265270 | 0.837948 | 3.844868e-57 | -8.615850e-47 |
| Msa0043850 | Msa0276430 | 0.831072 | 2.054054e-55 | -8.615850e-47 |
| Msa0043850 | Msa0296050 | -0.802227 | 6.199015e-49 | -8.615850e-47 |
| Msa0043850 | Msa0302730 | 0.804192 | 2.431096e-49 | -8.615850e-47 |
| Msa0043850 | Msa0305620 | 0.840367 | 9.075238e-58 | -8.615850e-47 |
| Msa0043850 | Msa0316470 | 0.820548 | 6.473263e-53 | -8.615850e-47 |
| Msa0043850 | Msa0319020 | 0.814686 | 1.357801e-51 | -8.615850e-47 |
| Msa0043850 | Msa0333970 | -0.800841 | 1.192818e-48 | -8.615850e-47 |
| Msa0043850 | Msa0362160 | 0.808199 | 3.483391e-50 | -8.615850e-47 |
| Msa0043850 | Msa0364790 | 0.840354 | 9.144401e-58 | -8.615850e-47 |
| Msa0043850 | Msa0365950 | 0.807462 | 4.996121e-50 | -8.615850e-47 |
| Msa0043850 | Msa0366780 | 0.806437 | 8.230519e-50 | -8.615850e-47 |
| Msa0043850 | Msa0374340 | -0.827073 | 1.913571e-54 | -8.615850e-47 |
| Msa0043850 | Msa0374420 | -0.813653 | 2.295191e-51 | -8.615850e-47 |
| Msa0043850 | Msa0380400 | -0.808746 | 2.661247e-50 | -8.615850e-47 |
| Msa0043850 | Msa0380600 | 0.838117 | 3.478838e-57 | -8.615850e-47 |
| Msa0043850 | Msa0388360 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0043850 | Msa0388730 | 0.815219 | 1.034254e-51 | -8.615850e-47 |
| Msa0043850 | Msa0389900 | 0.800252 | 1.572236e-48 | -8.615850e-47 |
| Msa0043850 | Msa0403470 | -0.840708 | 7.390799e-58 | -8.615850e-47 |
| Msa0043850 | Msa0412260 | 0.813362 | 2.660486e-51 | -8.615850e-47 |
| Msa0043850 | Msa0414730 | 0.808446 | 3.084295e-50 | -8.615850e-47 |
| Msa0043850 | Msa0427310 | 0.823245 | 1.536962e-53 | -8.615850e-47 |
| Msa0043850 | Msa0428200 | 0.812341 | 4.451087e-51 | -8.615850e-47 |
| Msa0043850 | Msa0430240 | 0.837075 | 6.435585e-57 | -8.615850e-47 |
| Msa0043850 | Msa0456770 | 0.835403 | 1.712639e-56 | -8.615850e-47 |
| Msa0043850 | Msa0500400 | 0.833872 | 4.153844e-56 | -8.615850e-47 |
| Msa0043850 | Msa0517990 | 0.814602 | 1.417208e-51 | -8.615850e-47 |
| Msa0043850 | Msa0529000 | 0.843351 | 1.478343e-58 | -8.615850e-47 |
| Msa0043850 | Msa0542530 | 0.810043 | 1.402573e-50 | -8.615850e-47 |
| Msa0043850 | Msa0545020 | 0.820220 | 7.696319e-53 | -8.615850e-47 |
| Msa0043850 | Msa0545050 | 0.835511 | 1.608357e-56 | -8.615850e-47 |
| Msa0043850 | Msa0561360 | 0.804630 | 1.970169e-49 | -8.615850e-47 |
| Msa0043850 | Msa0567370 | 0.840422 | 8.779115e-58 | -8.615850e-47 |
| Msa0043850 | Msa0574930 | 0.803659 | 3.136148e-49 | -8.615850e-47 |
| Msa0043850 | Msa0584580 | 0.806908 | 6.544309e-50 | -8.615850e-47 |
| Msa0043850 | Msa0584600 | 0.810948 | 8.939958e-51 | -8.615850e-47 |
| Msa0043850 | Msa0588590 | 0.819951 | 8.870083e-53 | -8.615850e-47 |
| Msa0043850 | Msa0592330 | 0.862396 | 5.219855e-64 | -8.615850e-47 |
| Msa0043850 | Msa0600590 | 0.853259 | 2.689693e-61 | -8.615850e-47 |
| Msa0043850 | Msa0606080 | 0.822057 | 2.904171e-53 | -8.615850e-47 |
| Msa0043850 | Msa0632420 | 0.826859 | 2.152683e-54 | -8.615850e-47 |
| Msa0043850 | Msa0641130 | 0.834183 | 3.472043e-56 | -8.615850e-47 |
| Msa0043850 | Msa0653880 | 0.815056 | 1.123850e-51 | -8.615850e-47 |
| Msa0043850 | Msa0654900 | 0.812340 | 4.452983e-51 | -8.615850e-47 |
| Msa0043850 | Msa0657120 | 0.807632 | 4.597632e-50 | -8.615850e-47 |
| Msa0043850 | Msa0679670 | 0.814470 | 1.515649e-51 | -8.615850e-47 |
| Msa0043850 | Msa0696100 | 0.813335 | 2.696605e-51 | -8.615850e-47 |
| Msa0043850 | Msa0697680 | 0.838977 | 2.086431e-57 | -8.615850e-47 |
| Msa0043850 | Msa0698450 | 0.835402 | 1.713392e-56 | -8.615850e-47 |
| Msa0043850 | Msa0698460 | 0.837598 | 4.728451e-57 | -8.615850e-47 |
| Msa0043850 | Msa0701100 | 0.802682 | 4.995367e-49 | -8.615850e-47 |
| Msa0043850 | Msa0703810 | 0.832792 | 7.723728e-56 | -8.615850e-47 |
| Msa0043850 | Msa0709120 | 0.810964 | 8.869233e-51 | -8.615850e-47 |
| Msa0043850 | Msa0734940 | 0.839380 | 1.640260e-57 | -8.615850e-47 |
| Msa0043850 | Msa0742430 | 0.828991 | 6.607144e-55 | -8.615850e-47 |
| Msa0043850 | Msa0743870 | 0.809937 | 1.478460e-50 | -8.615850e-47 |
| Msa0043850 | Msa0744640 | 0.813938 | 1.986094e-51 | -8.615850e-47 |
| Msa0043850 | Msa0764920 | 0.809167 | 2.163007e-50 | -8.615850e-47 |
| Msa0043850 | Msa0769720 | 0.848098 | 7.609156e-60 | -8.615850e-47 |
| Msa0043850 | Msa0771950 | 0.800179 | 1.627076e-48 | -8.615850e-47 |
| Msa0043850 | Msa0787790 | 0.817870 | 2.634627e-52 | -8.615850e-47 |
| Msa0043850 | Msa0794350 | 0.800959 | 1.128265e-48 | -8.615850e-47 |
| Msa0043850 | Msa0796580 | -0.818202 | 2.216306e-52 | -8.615850e-47 |
| Msa0043850 | Msa0798450 | 0.819524 | 1.110346e-52 | -8.615850e-47 |
| Msa0043850 | Msa0810440 | 0.831405 | 1.701144e-55 | -8.615850e-47 |
| Msa0043850 | Msa0817710 | 0.805474 | 1.311654e-49 | -8.615850e-47 |
| Msa0043850 | Msa0823540 | 0.844075 | 9.463577e-59 | -8.615850e-47 |
| Msa0043850 | Msa0841730 | 0.813984 | 1.940501e-51 | -8.615850e-47 |
| Msa0043850 | Msa0848440 | 0.826225 | 3.048553e-54 | -8.615850e-47 |
| Msa0043850 | Msa0862620 | 0.846606 | 1.954350e-59 | -8.615850e-47 |
| Msa0043850 | Msa0863720 | 0.818653 | 1.751594e-52 | -8.615850e-47 |
| Msa0043850 | Msa0863990 | 0.829269 | 5.656354e-55 | -8.615850e-47 |
| Msa0043850 | Msa0881530 | -0.802638 | 5.101803e-49 | -8.615850e-47 |
| Msa0043850 | Msa0968050 | 0.849601 | 2.911420e-60 | -8.615850e-47 |
| Msa0043850 | Msa0968470 | -0.820147 | 7.997596e-53 | -8.615850e-47 |
| Msa0043850 | Msa0982090 | -0.830929 | 2.226089e-55 | -8.615850e-47 |
| Msa0043850 | Msa1011250 | 0.825328 | 4.975906e-54 | -8.615850e-47 |
| Msa0043850 | Msa1016960 | 0.825218 | 5.285005e-54 | -8.615850e-47 |
| Msa0043850 | Msa1022030 | 0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0043850 | Msa1029520 | 0.833476 | 5.218388e-56 | -8.615850e-47 |
| Msa0043850 | Msa1031460 | 0.869226 | 3.627485e-66 | -8.615850e-47 |
| Msa0043850 | Msa1058200 | 0.824990 | 5.983760e-54 | -8.615850e-47 |
| Msa0043850 | Msa1062040 | 0.853252 | 2.701799e-61 | -8.615850e-47 |
| Msa0043850 | Msa1063360 | 0.831057 | 2.071003e-55 | -8.615850e-47 |
| Msa0043850 | Msa1068380 | 0.803688 | 3.093175e-49 | -8.615850e-47 |
| Msa0043850 | Msa1070540 | 0.892976 | 9.655849e-75 | -8.615850e-47 |
| Msa0043850 | Msa1082360 | 0.858844 | 6.231126e-63 | -8.615850e-47 |
| Msa0043850 | Msa1082520 | 0.827662 | 1.382137e-54 | -8.615850e-47 |
| Msa0043850 | Msa1082600 | 0.806591 | 7.634791e-50 | -8.615850e-47 |
| Msa0043850 | Msa1089190 | 0.821559 | 3.786167e-53 | -8.615850e-47 |
| Msa0043850 | Msa1101240 | 0.888454 | 5.822567e-73 | -8.615850e-47 |
| Msa0043850 | Msa1107200 | 0.844827 | 5.938228e-59 | -8.615850e-47 |
| Msa0043850 | Msa1109810 | 0.857656 | 1.406697e-62 | -8.615850e-47 |
| Msa0043850 | Msa1113100 | 0.825681 | 4.104853e-54 | -8.615850e-47 |
| Msa0043850 | Msa1114620 | 0.837139 | 6.200921e-57 | -8.615850e-47 |
| Msa0043850 | Msa1121300 | 0.811893 | 5.574939e-51 | -8.615850e-47 |
| Msa0043850 | Msa1127260 | 0.809265 | 2.060532e-50 | -8.615850e-47 |
| Msa0043850 | Msa1128270 | 0.807113 | 5.923483e-50 | -8.615850e-47 |
| Msa0043850 | Msa1150780 | 0.829703 | 4.438956e-55 | -8.615850e-47 |
| Msa0043850 | Msa1156490 | 0.802251 | 6.129488e-49 | -8.615850e-47 |
| Msa0043850 | Msa1158390 | 0.825563 | 4.379519e-54 | -8.615850e-47 |
| Msa0043850 | Msa1165430 | 0.808458 | 3.066773e-50 | -8.615850e-47 |
| Msa0043850 | Msa1168640 | 0.816028 | 6.827853e-52 | -8.615850e-47 |
| Msa0043850 | Msa1183140 | 0.853301 | 2.616729e-61 | -8.615850e-47 |
| Msa0043850 | Msa1184780 | 0.816616 | 5.044665e-52 | -8.615850e-47 |
| Msa0043850 | Msa1188350 | 0.853239 | 2.724745e-61 | -8.615850e-47 |
| Msa0043850 | Msa1190100 | -0.808870 | 2.504339e-50 | -8.615850e-47 |
| Msa0043850 | Msa1208450 | -0.832691 | 8.180341e-56 | -8.615850e-47 |
| Msa0043850 | Msa1208990 | 0.828590 | 8.259465e-55 | -8.615850e-47 |
| Msa0043850 | Msa1212470 | 0.803310 | 3.705442e-49 | -8.615850e-47 |
| Msa0043850 | Msa1214170 | 0.819110 | 1.379046e-52 | -8.615850e-47 |
| Msa0043850 | Msa1218160 | 0.844244 | 8.523201e-59 | -8.615850e-47 |
| Msa0043850 | Msa1221630 | 0.824919 | 6.217245e-54 | -8.615850e-47 |
| Msa0043850 | Msa1221960 | 0.805315 | 1.416665e-49 | -8.615850e-47 |
| Msa0043850 | Msa1229480 | 0.856925 | 2.313711e-62 | -8.615850e-47 |
| Msa0043850 | Msa1234620 | 0.804969 | 1.673282e-49 | -8.615850e-47 |
| Msa0043850 | Msa1236110 | -0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa0043850 | Msa1236440 | 0.826396 | 2.775312e-54 | -8.615850e-47 |
| Msa0043850 | Msa1238680 | 0.847752 | 9.477573e-60 | -8.615850e-47 |
| Msa0043850 | Msa1252000 | 0.844379 | 7.839901e-59 | -8.615850e-47 |
| Msa0043850 | Msa1259860 | 0.802336 | 5.889245e-49 | -8.615850e-47 |
| Msa0043850 | Msa1260060 | 0.827418 | 1.582253e-54 | -8.615850e-47 |
| Msa0043850 | Msa1260680 | 0.807544 | 4.800338e-50 | -8.615850e-47 |
| Msa0043850 | Msa1265020 | 0.814589 | 1.426700e-51 | -8.615850e-47 |
| Msa0043850 | Msa1272010 | 0.843421 | 1.415594e-58 | -8.615850e-47 |
| Msa0043850 | Msa1277670 | 0.826197 | 3.095185e-54 | -8.615850e-47 |
| Msa0043850 | Msa1280170 | 0.825648 | 4.179630e-54 | -8.615850e-47 |
| Msa0043850 | Msa1298390 | -0.816841 | 4.491741e-52 | -8.615850e-47 |
| Msa0043850 | Msa1299780 | 0.806970 | 6.351313e-50 | -8.615850e-47 |
| Msa0043850 | Msa1307160 | 0.819597 | 1.068538e-52 | -8.615850e-47 |
| Msa0043850 | Msa1309760 | 0.844616 | 6.769760e-59 | -8.615850e-47 |
| Msa0043850 | Msa1312140 | 0.803936 | 2.748138e-49 | -8.615850e-47 |
| Msa0043850 | Msa1316360 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
| Msa0043850 | Msa1325410 | -0.806188 | 9.284569e-50 | -8.615850e-47 |
| Msa0043850 | Msa1337850 | 0.817964 | 2.508744e-52 | -8.615850e-47 |
| Msa0043850 | Msa1360020 | 0.815350 | 9.671924e-52 | -8.615850e-47 |
| Msa0043850 | Msa1364080 | 0.833667 | 4.674498e-56 | -8.615850e-47 |
| Msa0043850 | Msa1369920 | -0.842961 | 1.878041e-58 | -8.615850e-47 |
| Msa0043850 | Msa1370810 | 0.825438 | 4.688408e-54 | -8.615850e-47 |
| Msa0043850 | Msa1375610 | -0.805822 | 1.108800e-49 | -8.615850e-47 |
| Msa0043850 | Msa1379020 | 0.847085 | 1.445315e-59 | -8.615850e-47 |
| Msa0043850 | Msa1382020 | 0.810547 | 1.092060e-50 | -8.615850e-47 |
| Msa0043850 | Msa1382380 | -0.828752 | 7.550589e-55 | -8.615850e-47 |
| Msa0043850 | Msa1389640 | 0.834315 | 3.217395e-56 | -8.615850e-47 |
| Msa0043850 | Msa1407760 | 0.849225 | 3.706715e-60 | -8.615850e-47 |
| Msa0043850 | Msa1407880 | 0.874732 | 5.365178e-68 | -8.615850e-47 |
| Msa0043850 | Msa1419840 | 0.807634 | 4.592194e-50 | -8.615850e-47 |
| Msa0043850 | Msa1423540 | 0.800583 | 1.346642e-48 | -8.615850e-47 |
| Msa0043850 | Msa1437730 | 0.804818 | 1.799276e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043850 | MtrunA17_Chr1g0210471 | 97.959 | 245 | 4 | 1 | 1 | 245 | 1 | 244 | 0.0 | 496 |
| Msa0043850 | MtrunA17_Chr1g0162081 | 54.688 | 192 | 69 | 2 | 23 | 200 | 10 | 197 | 2.05e-63 | 200 |
| Msa0043850 | MtrunA17_Chr3g0104071 | 44.578 | 249 | 108 | 8 | 23 | 245 | 41 | 285 | 4.13e-59 | 189 |
| Msa0043850 | MtrunA17_Chr5g0429521 | 50.282 | 177 | 79 | 2 | 23 | 193 | 27 | 200 | 7.75e-56 | 181 |
| Msa0043850 | MtrunA17_Chr7g0241761 | 49.206 | 189 | 79 | 4 | 23 | 200 | 33 | 215 | 8.49e-55 | 178 |
| Msa0043850 | MtrunA17_Chr5g0436501 | 49.189 | 185 | 80 | 4 | 23 | 200 | 25 | 202 | 9.38e-55 | 177 |
| Msa0043850 | MtrunA17_Chr4g0062741 | 46.500 | 200 | 77 | 3 | 25 | 194 | 8 | 207 | 6.09e-54 | 176 |
| Msa0043850 | MtrunA17_Chr8g0365011 | 42.708 | 192 | 80 | 3 | 23 | 200 | 6 | 181 | 5.12e-42 | 144 |
| Msa0043850 | MtrunA17_Chr4g0055931 | 52.800 | 125 | 43 | 2 | 94 | 202 | 49 | 173 | 9.50e-36 | 129 |
| Msa0043850 | MtrunA17_Chr2g0331031 | 62.222 | 90 | 33 | 1 | 120 | 208 | 104 | 193 | 4.79e-33 | 122 |
| Msa0043850 | MtrunA17_Chr5g0432921 | 40.000 | 190 | 98 | 7 | 24 | 209 | 20 | 197 | 6.20e-33 | 119 |
| Msa0043850 | MtrunA17_Chr5g0432941 | 40.415 | 193 | 92 | 8 | 24 | 209 | 21 | 197 | 1.27e-31 | 115 |
| Msa0043850 | MtrunA17_Chr8g0389241 | 62.069 | 87 | 32 | 1 | 103 | 189 | 83 | 168 | 1.77e-30 | 114 |
| Msa0043850 | MtrunA17_Chr6g0488471 | 71.429 | 70 | 20 | 0 | 120 | 189 | 92 | 161 | 2.09e-30 | 114 |
| Msa0043850 | MtrunA17_Chr5g0415191 | 68.421 | 76 | 24 | 0 | 116 | 191 | 93 | 168 | 3.94e-27 | 106 |
| Msa0043850 | MtrunA17_Chr4g0059701 | 65.169 | 89 | 29 | 2 | 118 | 206 | 77 | 163 | 3.60e-26 | 103 |
| Msa0043850 | MtrunA17_Chr3g0092621 | 65.152 | 66 | 23 | 0 | 126 | 191 | 85 | 150 | 6.38e-25 | 97.1 |
| Msa0043850 | MtrunA17_Chr8g0364741 | 43.548 | 124 | 62 | 3 | 23 | 142 | 8 | 127 | 3.83e-24 | 93.6 |
| Msa0043850 | MtrunA17_Chr5g0409841 | 41.304 | 138 | 68 | 5 | 86 | 219 | 56 | 184 | 4.04e-24 | 96.7 |
| Msa0043850 | MtrunA17_Chr5g0440731 | 40.000 | 155 | 70 | 6 | 73 | 210 | 56 | 204 | 7.11e-24 | 97.1 |
| Msa0043850 | MtrunA17_Chr5g0440741 | 50.505 | 99 | 33 | 3 | 127 | 210 | 102 | 199 | 1.27e-23 | 96.3 |
| Msa0043850 | MtrunA17_Chr3g0135671 | 64.789 | 71 | 22 | 2 | 122 | 189 | 88 | 158 | 1.98e-23 | 94.7 |
| Msa0043850 | MtrunA17_Chr8g0364731 | 69.565 | 69 | 17 | 2 | 134 | 198 | 10 | 78 | 5.86e-21 | 87.0 |
| Msa0043850 | MtrunA17_Chr6g0452791 | 53.846 | 78 | 25 | 2 | 126 | 203 | 81 | 147 | 4.35e-20 | 84.3 |
| Msa0043850 | MtrunA17_Chr5g0409831 | 48.387 | 93 | 44 | 2 | 115 | 203 | 67 | 159 | 3.02e-18 | 80.9 |
| Msa0043850 | MtrunA17_Chr1g0155181 | 42.254 | 71 | 41 | 0 | 25 | 95 | 7 | 77 | 3.65e-16 | 71.2 |
| Msa0043850 | MtrunA17_Chr8g0357851 | 85.417 | 48 | 7 | 0 | 1 | 48 | 1 | 48 | 6.31e-16 | 69.7 |
| Msa0043850 | MtrunA17_Chr3g0144631 | 47.619 | 63 | 33 | 0 | 25 | 87 | 16 | 78 | 1.10e-15 | 70.1 |
| Msa0043850 | MtrunA17_Chr3g0141601 | 41.667 | 72 | 42 | 0 | 23 | 94 | 5 | 76 | 2.83e-15 | 69.3 |
| Msa0043850 | MtrunA17_Chr5g0404101 | 44.928 | 69 | 38 | 0 | 19 | 87 | 13 | 81 | 9.91e-15 | 67.8 |
| Msa0043850 | MtrunA17_Chr1g0192061 | 52.055 | 73 | 31 | 2 | 127 | 196 | 63 | 134 | 5.33e-14 | 68.2 |
| Msa0043850 | MtrunA17_Chr6g0449111 | 43.284 | 67 | 38 | 0 | 23 | 89 | 8 | 74 | 5.63e-14 | 65.5 |
| Msa0043850 | MtrunA17_Chr3g0113121 | 34.014 | 147 | 73 | 5 | 68 | 193 | 27 | 170 | 2.02e-13 | 67.4 |
| Msa0043850 | MtrunA17_Chr7g0255841 | 50.000 | 58 | 29 | 0 | 30 | 87 | 17 | 74 | 4.22e-13 | 63.5 |
| Msa0043850 | MtrunA17_Chr3g0081631 | 40.909 | 66 | 38 | 1 | 25 | 89 | 10 | 75 | 3.42e-12 | 60.8 |
| Msa0043850 | MtrunA17_Chr3g0141641 | 36.264 | 91 | 48 | 4 | 25 | 114 | 3 | 84 | 2.50e-11 | 58.5 |
| Msa0043850 | MtrunA17_Chr8g0373131 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 3.54e-11 | 57.8 |
| Msa0043850 | MtrunA17_Chr8g0373111 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 4.24e-11 | 57.4 |
| Msa0043850 | MtrunA17_Chr8g0373121 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 4.24e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043850 | AT5G04760.1 | 58.296 | 223 | 82 | 4 | 23 | 245 | 4 | 215 | 2.52e-80 | 240 |
| Msa0043850 | AT5G08520.1 | 54.545 | 187 | 69 | 3 | 25 | 200 | 12 | 193 | 2.11e-60 | 192 |
| Msa0043850 | AT3G11280.2 | 51.497 | 167 | 75 | 2 | 25 | 191 | 33 | 193 | 2.55e-55 | 178 |
| Msa0043850 | AT3G11280.1 | 51.497 | 167 | 75 | 2 | 25 | 191 | 33 | 193 | 2.55e-55 | 178 |
| Msa0043850 | AT2G38090.1 | 40.000 | 260 | 130 | 6 | 6 | 243 | 7 | 262 | 9.26e-55 | 178 |
| Msa0043850 | AT5G58900.1 | 47.778 | 180 | 79 | 2 | 25 | 193 | 34 | 209 | 2.61e-53 | 174 |
| Msa0043850 | AT5G05790.2 | 46.591 | 176 | 88 | 2 | 21 | 193 | 27 | 199 | 5.18e-53 | 173 |
| Msa0043850 | AT5G05790.1 | 46.591 | 176 | 88 | 2 | 21 | 193 | 27 | 199 | 5.18e-53 | 173 |
| Msa0043850 | AT1G49010.1 | 45.175 | 228 | 87 | 7 | 25 | 226 | 8 | 223 | 6.32e-53 | 174 |
| Msa0043850 | AT5G01200.1 | 40.376 | 213 | 103 | 5 | 1 | 193 | 6 | 214 | 2.67e-45 | 152 |
| Msa0043850 | AT5G23650.1 | 40.359 | 223 | 111 | 3 | 23 | 229 | 11 | 227 | 4.08e-45 | 154 |
| Msa0043850 | AT3G10580.2 | 44.550 | 211 | 93 | 6 | 25 | 234 | 8 | 195 | 1.79e-43 | 147 |
| Msa0043850 | AT3G10580.1 | 44.550 | 211 | 93 | 6 | 25 | 234 | 8 | 195 | 3.71e-43 | 148 |
| Msa0043850 | AT4G09450.1 | 49.102 | 167 | 69 | 3 | 24 | 190 | 6 | 156 | 5.55e-42 | 142 |
| Msa0043850 | AT5G47390.1 | 66.265 | 83 | 26 | 1 | 120 | 202 | 91 | 171 | 5.75e-32 | 120 |
| Msa0043850 | AT5G61620.1 | 51.724 | 116 | 54 | 1 | 80 | 193 | 61 | 176 | 4.58e-29 | 112 |
| Msa0043850 | AT5G56840.1 | 65.432 | 81 | 24 | 2 | 120 | 196 | 86 | 166 | 8.92e-29 | 108 |
| Msa0043850 | AT1G70000.1 | 73.333 | 75 | 20 | 0 | 116 | 190 | 89 | 163 | 1.22e-28 | 109 |
| Msa0043850 | AT1G70000.2 | 73.333 | 75 | 20 | 0 | 116 | 190 | 89 | 163 | 1.22e-28 | 109 |
| Msa0043850 | AT3G16350.1 | 50.000 | 122 | 52 | 3 | 110 | 229 | 125 | 239 | 2.09e-25 | 103 |
| Msa0043850 | AT3G10590.1 | 38.021 | 192 | 106 | 7 | 24 | 208 | 6 | 191 | 6.43e-25 | 98.2 |
| Msa0043850 | AT1G19000.2 | 50.847 | 118 | 51 | 2 | 74 | 191 | 58 | 168 | 8.62e-24 | 97.1 |
| Msa0043850 | AT1G19000.1 | 50.847 | 118 | 51 | 2 | 74 | 191 | 58 | 168 | 8.62e-24 | 97.1 |
| Msa0043850 | AT3G10585.1 | 38.323 | 167 | 67 | 4 | 25 | 190 | 7 | 138 | 1.61e-23 | 93.6 |
| Msa0043850 | AT1G74840.2 | 65.333 | 75 | 26 | 0 | 117 | 191 | 88 | 162 | 7.39e-23 | 93.6 |
| Msa0043850 | AT1G74840.1 | 65.333 | 75 | 26 | 0 | 117 | 191 | 88 | 162 | 1.08e-22 | 94.0 |
| Msa0043850 | AT3G10595.1 | 31.792 | 173 | 85 | 6 | 25 | 195 | 6 | 147 | 1.95e-18 | 80.5 |
| Msa0043850 | AT1G75250.2 | 42.667 | 75 | 41 | 1 | 13 | 87 | 2 | 74 | 1.27e-16 | 73.2 |
| Msa0043850 | AT1G75250.1 | 42.667 | 75 | 41 | 1 | 13 | 87 | 2 | 74 | 2.15e-16 | 73.6 |
| Msa0043850 | AT4G39250.1 | 39.474 | 76 | 46 | 0 | 25 | 100 | 14 | 89 | 1.97e-15 | 70.1 |
| Msa0043850 | AT2G18328.1 | 50.000 | 60 | 30 | 0 | 30 | 89 | 16 | 75 | 3.56e-13 | 63.5 |
| Msa0043850 | AT2G21650.1 | 41.096 | 73 | 43 | 0 | 25 | 97 | 14 | 86 | 3.57e-12 | 61.6 |
| Msa0043850 | AT1G19510.1 | 44.068 | 59 | 33 | 0 | 29 | 87 | 16 | 74 | 4.79e-12 | 61.2 |
| Msa0043850 | AT4G36570.1 | 59.091 | 44 | 18 | 0 | 25 | 68 | 12 | 55 | 3.72e-11 | 57.4 |
Find 91 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTGGGCTGACCAAATT+TGG | 0.115459 | 1_1:+75345690 | Msa0043850:CDS |
| CCAATCTCCTTTCCCAAATT+TGG | 0.134856 | 1_1:-75345703 | None:intergenic |
| CTGTGCAGGCTGTTTCTTAT+TGG | 0.143950 | 1_1:+75345675 | Msa0043850:intron |
| GTAAGTCTGCGACGGAAATT+AGG | 0.198649 | 1_1:+75344623 | Msa0043850:CDS |
| TCTCTTTCTTCACCGAATTC+TGG | 0.216560 | 1_1:-75345803 | None:intergenic |
| GCATATGGGTATTCAAATTA+TGG | 0.241889 | 1_1:+75345987 | Msa0043850:CDS |
| TATAGTTACTTAAAACAAAT+AGG | 0.257836 | 1_1:+75346156 | Msa0043850:three_prime_UTR |
| CTGTGCCTATTGATCAGAAC+TGG | 0.289180 | 1_1:+75345877 | Msa0043850:CDS |
| TGTGCAGGCTGTTTCTTATT+GGG | 0.291908 | 1_1:+75345676 | Msa0043850:intron |
| CCAAATTTGGGAAAGGAGAT+TGG | 0.329445 | 1_1:+75345703 | Msa0043850:CDS |
| CCGCGTCGTGGCGGCGGTGG+TGG | 0.329644 | 1_1:-75344482 | None:intergenic |
| GTTGATAATTAAATTATTAG+TGG | 0.352552 | 1_1:+75346132 | Msa0043850:three_prime_UTR |
| TGATATACTGGAAATTGATT+CGG | 0.359965 | 1_1:+75344669 | Msa0043850:CDS |
| TGGTGGTGGATTGGCTGAAT+GGG | 0.366393 | 1_1:+75344735 | Msa0043850:CDS |
| AGCTTTGGTTCATGATATAC+TGG | 0.372414 | 1_1:+75344657 | Msa0043850:CDS |
| CAGGATCAAATGAGTGCATA+TGG | 0.389179 | 1_1:+75345972 | Msa0043850:CDS |
| ATAGTTACTTAAAACAAATA+GGG | 0.389710 | 1_1:+75346157 | Msa0043850:three_prime_UTR |
| GATGGTGCCGGAGGATTTAC+CGG | 0.392546 | 1_1:+75344567 | Msa0043850:CDS |
| TAGGGATCACTATGAAGCTT+TGG | 0.393734 | 1_1:+75344642 | Msa0043850:CDS |
| GTGGTGGTGGATTGGCTGAA+TGG | 0.393857 | 1_1:+75344734 | Msa0043850:CDS |
| CGGCCACCGCGTCGTGGCGG+CGG | 0.396563 | 1_1:-75344488 | None:intergenic |
| TTATTGGGCTGACCAAATTT+GGG | 0.397453 | 1_1:+75345691 | Msa0043850:CDS |
| TCTTCGAATCAAATTTCGTT+TGG | 0.406289 | 1_1:+75344760 | Msa0043850:CDS |
| AATTGATTCGGGTCGGGTTG+AGG | 0.410540 | 1_1:+75344681 | Msa0043850:CDS |
| GTACTTTCTTCGCCAGAATT+CGG | 0.412820 | 1_1:+75345791 | Msa0043850:CDS |
| CAGAACTGGGTTCCTCCTCC+TGG | 0.418709 | 1_1:+75345891 | Msa0043850:CDS |
| CCACCGCGTCGTGGCGGCGG+TGG | 0.422019 | 1_1:-75344485 | None:intergenic |
| GATATACTGGAAATTGATTC+GGG | 0.424201 | 1_1:+75344670 | Msa0043850:CDS |
| GGAACCCAGTTCTGATCAAT+AGG | 0.426296 | 1_1:-75345882 | None:intergenic |
| GTTCGAGCGAGCTCTGTTGA+TGG | 0.427794 | 1_1:+75344549 | Msa0043850:CDS |
| TAAGTCTGCGACGGAAATTA+GGG | 0.429071 | 1_1:+75344624 | Msa0043850:CDS |
| CTGTGTTCTTCTTCAGTCCA+TGG | 0.441575 | 1_1:-75344829 | None:intergenic |
| TTATCCGTCAAACGATTTGC+AGG | 0.442120 | 1_1:+75345953 | Msa0043850:CDS |
| TGATCCTGCAAATCGTTTGA+CGG | 0.446093 | 1_1:-75345957 | None:intergenic |
| ATTTCCGTCGCAGACTTACC+TGG | 0.452535 | 1_1:-75344619 | None:intergenic |
| TGGGTTCCTCCTCCTGGTGG+TGG | 0.475189 | 1_1:+75345897 | Msa0043850:CDS |
| AAGATCGCGGAACAAGTTCC+AGG | 0.479111 | 1_1:+75344601 | Msa0043850:CDS |
| AAACGACAAAATAGATGTAT+CGG | 0.481957 | 1_1:+75344440 | Msa0043850:exon |
| GCCGAGTTATTCTGATGAAT+CGG | 0.482612 | 1_1:+75344705 | Msa0043850:CDS |
| GAATCGGCTGTGAGTGGTGG+TGG | 0.484996 | 1_1:+75344721 | Msa0043850:CDS |
| ACTGGAAATTGATTCGGGTC+GGG | 0.496104 | 1_1:+75344675 | Msa0043850:CDS |
| GAGATTGGAGAAGCATTTCA+AGG | 0.497665 | 1_1:+75345718 | Msa0043850:CDS |
| GTTGAATTCAAAAGGTGTGA+TGG | 0.505062 | 1_1:-75344412 | None:intergenic |
| GCGATCTTCTCCCACCGGTC+CGG | 0.507834 | 1_1:-75344586 | None:intergenic |
| GGCTGTGAGTGGTGGTGGAT+TGG | 0.511900 | 1_1:+75344726 | Msa0043850:CDS |
| TACTGGAAATTGATTCGGGT+CGG | 0.512665 | 1_1:+75344674 | Msa0043850:CDS |
| CACCGGTCCGGTAAATCCTC+CGG | 0.521987 | 1_1:-75344574 | None:intergenic |
| CCACCACCGCCGCCACGACG+CGG | 0.524799 | 1_1:+75344482 | Msa0043850:CDS |
| GCGAGCTCTGTTGATGGTGC+CGG | 0.528587 | 1_1:+75344555 | Msa0043850:CDS |
| GTATCGGGAGTCAGTTGCTA+TGG | 0.535551 | 1_1:+75344456 | Msa0043850:CDS |
| TGTTGCATTGAACCACCACC+AGG | 0.537371 | 1_1:-75345909 | None:intergenic |
| AACGACAAAATAGATGTATC+GGG | 0.540302 | 1_1:+75344441 | Msa0043850:exon |
| GTCCACTGAGTTGGTTGAGT+CGG | 0.541227 | 1_1:-75344508 | None:intergenic |
| TCGTTATCACCGCCATGTCT+CGG | 0.543106 | 1_1:-75344790 | None:intergenic |
| GGTGATAACGAGAGGAAGAA+AGG | 0.548667 | 1_1:+75344802 | Msa0043850:CDS |
| CGGAGGATTTACCGGACCGG+TGG | 0.556040 | 1_1:+75344575 | Msa0043850:CDS |
| TTTGGTTCGAAGCCGAGACA+TGG | 0.569715 | 1_1:+75344778 | Msa0043850:CDS |
| GTTCCGCGATCTTCTCCCAC+CGG | 0.572597 | 1_1:-75344591 | None:intergenic |
| AACTGGGTTCCTCCTCCTGG+TGG | 0.574702 | 1_1:+75345894 | Msa0043850:CDS |
| GGGCTGACCAAATTTGGGAA+AGG | 0.576808 | 1_1:+75345696 | Msa0043850:CDS |
| CTCGCTCGAACAGCTTGTCA+TGG | 0.578069 | 1_1:-75344537 | None:intergenic |
| CAGTTCTGATCAATAGGCAC+AGG | 0.581958 | 1_1:-75345876 | None:intergenic |
| GCATGGCTAGCCACCTGAGT+TGG | 0.585938 | 1_1:-75345762 | None:intergenic |
| TGCCGGAGGATTTACCGGAC+CGG | 0.588914 | 1_1:+75344572 | Msa0043850:CDS |
| TGGTCTCGAGTCCACTGAGT+TGG | 0.594247 | 1_1:-75344517 | None:intergenic |
| TGTGACAAGAACACCAACTC+AGG | 0.595788 | 1_1:+75345749 | Msa0043850:CDS |
| AGCTCTGTTGATGGTGCCGG+AGG | 0.598113 | 1_1:+75344558 | Msa0043850:CDS |
| AGTCGGCCACCGCGTCGTGG+CGG | 0.599166 | 1_1:-75344491 | None:intergenic |
| AGGATCAAATGAGTGCATAT+GGG | 0.599865 | 1_1:+75345973 | Msa0043850:CDS |
| AGAGGAAGAAAGGAACTCCA+TGG | 0.603418 | 1_1:+75344812 | Msa0043850:CDS |
| AGAATTCGGTGAAGAAAGAG+AGG | 0.605688 | 1_1:+75345805 | Msa0043850:CDS |
| TGTGCCTATTGATCAGAACT+GGG | 0.607519 | 1_1:+75345878 | Msa0043850:CDS |
| TTGAGTCGGCCACCGCGTCG+TGG | 0.614569 | 1_1:-75344494 | None:intergenic |
| CCACCGCCGCCACGACGCGG+TGG | 0.616473 | 1_1:+75344485 | Msa0043850:CDS |
| ATTGAACCACCACCAGGAGG+AGG | 0.621879 | 1_1:-75345903 | None:intergenic |
| TGCTAGTTGACAGAGTAACT+AGG | 0.622724 | 1_1:+75346104 | Msa0043850:three_prime_UTR |
| TCTGATGAATCGGCTGTGAG+TGG | 0.640798 | 1_1:+75344715 | Msa0043850:CDS |
| GGCCGACTCAACCAACTCAG+TGG | 0.643487 | 1_1:+75344506 | Msa0043850:CDS |
| TATTCATGACATTACATCGG+TGG | 0.643904 | 1_1:+75345839 | Msa0043850:CDS |
| GGAGGATTTACCGGACCGGT+GGG | 0.645323 | 1_1:+75344576 | Msa0043850:CDS |
| GACATGGCGGTGATAACGAG+AGG | 0.648245 | 1_1:+75344794 | Msa0043850:CDS |
| GATGAATCGGCTGTGAGTGG+TGG | 0.651355 | 1_1:+75344718 | Msa0043850:CDS |
| AGTTCCAGGTAAGTCTGCGA+CGG | 0.655266 | 1_1:+75344615 | Msa0043850:CDS |
| GGACCGGTGGGAGAAGATCG+CGG | 0.663194 | 1_1:+75344588 | Msa0043850:CDS |
| GACAAGAACACCAACTCAGG+TGG | 0.663453 | 1_1:+75345752 | Msa0043850:CDS |
| GCCGATTCATCAGAATAACT+CGG | 0.668580 | 1_1:-75344706 | None:intergenic |
| AAGTATTCATGACATTACAT+CGG | 0.675179 | 1_1:+75345836 | Msa0043850:CDS |
| GCACTATATACAAAATCACA+CGG | 0.691824 | 1_1:-75346036 | None:intergenic |
| TGCATTGAACCACCACCAGG+AGG | 0.701355 | 1_1:-75345906 | None:intergenic |
| CATGGACTGAAGAAGAACAC+AGG | 0.714829 | 1_1:+75344830 | Msa0043850:CDS |
| GGTTCGAAGCCGAGACATGG+CGG | 0.716484 | 1_1:+75344781 | Msa0043850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+CGG | + | chr1_1:75345257-75345276 | Msa0043850:intron | 0.0% |
| !! | AAAAAAAAAAAAAAAAAAAA+CGG | + | chr1_1:75345257-75345276 | Msa0043850:intron | 0.0% |
| !!! | TTTAGTTTTTTTTTTTTTTC+TGG | + | chr1_1:75344889-75344908 | Msa0043850:intron | 10.0% |
| !!! | TTAGTTTTTTTTTTTTTTCT+GGG | + | chr1_1:75344890-75344909 | Msa0043850:intron | 10.0% |
| !!! | TTTAATTTTAATCTTTTTTG+GGG | + | chr1_1:75345015-75345034 | Msa0043850:intron | 10.0% |
| !!! | TTTAGTTTTTTTTTTTTTTC+TGG | + | chr1_1:75344889-75344908 | Msa0043850:intron | 10.0% |
| !!! | TTAGTTTTTTTTTTTTTTCT+GGG | + | chr1_1:75344890-75344909 | Msa0043850:intron | 10.0% |
| !!! | TTTAATTTTAATCTTTTTTG+GGG | + | chr1_1:75345015-75345034 | Msa0043850:intron | 10.0% |
| !! | AAAAGTTATGTTAAAGATAA+AGG | - | chr1_1:75344955-75344974 | None:intergenic | 15.0% |
| !!! | TTATCTTTAACATAACTTTT+TGG | + | chr1_1:75344955-75344974 | Msa0043850:intron | 15.0% |
| !!! | TTAATTTTAATCTTTTTTGG+GGG | + | chr1_1:75345016-75345035 | Msa0043850:intron | 15.0% |
| !!! | GTTGATAATTAAATTATTAG+TGG | + | chr1_1:75346132-75346151 | Msa0043850:three_prime_UTR | 15.0% |
| !! | TATAGTTACTTAAAACAAAT+AGG | + | chr1_1:75346156-75346175 | Msa0043850:three_prime_UTR | 15.0% |
| !! | ATAGTTACTTAAAACAAATA+GGG | + | chr1_1:75346157-75346176 | Msa0043850:three_prime_UTR | 15.0% |
| !! | AAAAGTTATGTTAAAGATAA+AGG | - | chr1_1:75344955-75344974 | None:intergenic | 15.0% |
| !!! | TTATCTTTAACATAACTTTT+TGG | + | chr1_1:75344955-75344974 | Msa0043850:intron | 15.0% |
| !!! | TTAATTTTAATCTTTTTTGG+GGG | + | chr1_1:75345016-75345035 | Msa0043850:intron | 15.0% |
| !!! | GTTGATAATTAAATTATTAG+TGG | + | chr1_1:75346132-75346151 | Msa0043850:three_prime_UTR | 15.0% |
| !! | TATAGTTACTTAAAACAAAT+AGG | + | chr1_1:75346156-75346175 | Msa0043850:three_prime_UTR | 15.0% |
| !! | ATAGTTACTTAAAACAAATA+GGG | + | chr1_1:75346157-75346176 | Msa0043850:three_prime_UTR | 15.0% |
| !!! | TTTTGTTAGTTGAATTCAAA+AGG | - | chr1_1:75344423-75344442 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTGGGTTTAT+TGG | + | chr1_1:75344898-75344917 | Msa0043850:intron | 20.0% |
| !!! | GTTTATTGGTTTTGATTTTA+GGG | + | chr1_1:75344912-75344931 | Msa0043850:intron | 20.0% |
| !!! | TTAACATAACTTTTTGGAAT+TGG | + | chr1_1:75344961-75344980 | Msa0043850:intron | 20.0% |
| !!! | TAATTTTAATCTTTTTTGGG+GGG | + | chr1_1:75345017-75345036 | Msa0043850:intron | 20.0% |
| !! | TACAAAATGTAGTTAAATAG+AGG | + | chr1_1:75345592-75345611 | Msa0043850:intron | 20.0% |
| !!! | TTTTGTTAGTTGAATTCAAA+AGG | - | chr1_1:75344423-75344442 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTGGGTTTAT+TGG | + | chr1_1:75344898-75344917 | Msa0043850:intron | 20.0% |
| !!! | GTTTATTGGTTTTGATTTTA+GGG | + | chr1_1:75344912-75344931 | Msa0043850:intron | 20.0% |
| !!! | TTAACATAACTTTTTGGAAT+TGG | + | chr1_1:75344961-75344980 | Msa0043850:intron | 20.0% |
| !!! | TAATTTTAATCTTTTTTGGG+GGG | + | chr1_1:75345017-75345036 | Msa0043850:intron | 20.0% |
| !! | TACAAAATGTAGTTAAATAG+AGG | + | chr1_1:75345592-75345611 | Msa0043850:intron | 20.0% |
| ! | AAACGACAAAATAGATGTAT+CGG | + | chr1_1:75344440-75344459 | Msa0043850:exon | 25.0% |
| ! | TGATATACTGGAAATTGATT+CGG | + | chr1_1:75344669-75344688 | Msa0043850:CDS | 25.0% |
| !!! | GGTTTATTGGTTTTGATTTT+AGG | + | chr1_1:75344911-75344930 | Msa0043850:intron | 25.0% |
| !! | AATTGGATGCCATAATTTTA+AGG | + | chr1_1:75344978-75344997 | Msa0043850:intron | 25.0% |
| !!! | ATGCCATAATTTTAAGGAAT+GGG | + | chr1_1:75344984-75345003 | Msa0043850:intron | 25.0% |
| ! | ATTCCCATTCCTTAAAATTA+TGG | - | chr1_1:75344990-75345009 | None:intergenic | 25.0% |
| ! | TAAACAATGATGTCAAATAG+CGG | + | chr1_1:75345297-75345316 | Msa0043850:intron | 25.0% |
| ! | ATGTTAAATTGCTATAGTGT+CGG | - | chr1_1:75345452-75345471 | None:intergenic | 25.0% |
| ! | ACTATAGCAATTTAACATAG+CGG | + | chr1_1:75345454-75345473 | Msa0043850:intron | 25.0% |
| ! | AGAATTTGAACAAATCACTT+TGG | + | chr1_1:75345549-75345568 | Msa0043850:intron | 25.0% |
| ! | AAGTATTCATGACATTACAT+CGG | + | chr1_1:75345836-75345855 | Msa0043850:CDS | 25.0% |
| !! | GCATTAGATTTTCATTTATC+TGG | + | chr1_1:75346057-75346076 | Msa0043850:three_prime_UTR | 25.0% |
| !!! | GGTTTTATTTGTGAAGTTTA+TGG | + | chr1_1:75346078-75346097 | Msa0043850:three_prime_UTR | 25.0% |
| !! | AAAACAAATAGGGAACTTTT+AGG | + | chr1_1:75346167-75346186 | Msa0043850:three_prime_UTR | 25.0% |
| ! | AAACGACAAAATAGATGTAT+CGG | + | chr1_1:75344440-75344459 | Msa0043850:exon | 25.0% |
| ! | TGATATACTGGAAATTGATT+CGG | + | chr1_1:75344669-75344688 | Msa0043850:CDS | 25.0% |
| !!! | GGTTTATTGGTTTTGATTTT+AGG | + | chr1_1:75344911-75344930 | Msa0043850:intron | 25.0% |
| !! | AATTGGATGCCATAATTTTA+AGG | + | chr1_1:75344978-75344997 | Msa0043850:intron | 25.0% |
| !!! | ATGCCATAATTTTAAGGAAT+GGG | + | chr1_1:75344984-75345003 | Msa0043850:intron | 25.0% |
| ! | ATTCCCATTCCTTAAAATTA+TGG | - | chr1_1:75344990-75345009 | None:intergenic | 25.0% |
| ! | TAAACAATGATGTCAAATAG+CGG | + | chr1_1:75345297-75345316 | Msa0043850:intron | 25.0% |
| ! | ATGTTAAATTGCTATAGTGT+CGG | - | chr1_1:75345452-75345471 | None:intergenic | 25.0% |
| ! | ACTATAGCAATTTAACATAG+CGG | + | chr1_1:75345454-75345473 | Msa0043850:intron | 25.0% |
| ! | AGAATTTGAACAAATCACTT+TGG | + | chr1_1:75345549-75345568 | Msa0043850:intron | 25.0% |
| ! | AAGTATTCATGACATTACAT+CGG | + | chr1_1:75345836-75345855 | Msa0043850:CDS | 25.0% |
| !! | GCATTAGATTTTCATTTATC+TGG | + | chr1_1:75346057-75346076 | Msa0043850:three_prime_UTR | 25.0% |
| !!! | GGTTTTATTTGTGAAGTTTA+TGG | + | chr1_1:75346078-75346097 | Msa0043850:three_prime_UTR | 25.0% |
| !! | AAAACAAATAGGGAACTTTT+AGG | + | chr1_1:75346167-75346186 | Msa0043850:three_prime_UTR | 25.0% |
| AACGACAAAATAGATGTATC+GGG | + | chr1_1:75344441-75344460 | Msa0043850:exon | 30.0% | |
| ! | GATATACTGGAAATTGATTC+GGG | + | chr1_1:75344670-75344689 | Msa0043850:CDS | 30.0% |
| TCTTCGAATCAAATTTCGTT+TGG | + | chr1_1:75344760-75344779 | Msa0043850:CDS | 30.0% | |
| !! | GATGCCATAATTTTAAGGAA+TGG | + | chr1_1:75344983-75345002 | Msa0043850:intron | 30.0% |
| !! | AGGTTCTAAAAAGTGTATTG+CGG | - | chr1_1:75345371-75345390 | None:intergenic | 30.0% |
| !! | TAGAACCTATCACTTTTGAT+CGG | + | chr1_1:75345383-75345402 | Msa0043850:intron | 30.0% |
| TATTACCGATCAAAAGTGAT+AGG | - | chr1_1:75345391-75345410 | None:intergenic | 30.0% | |
| TACAAAATGTCCTTGAATAG+AGG | + | chr1_1:75345421-75345440 | Msa0043850:intron | 30.0% | |
| ! | CCTTGTTTAACATAAAACAG+CGG | - | chr1_1:75345492-75345511 | None:intergenic | 30.0% |
| ACACTAGCAATTTAACATAG+AGG | + | chr1_1:75345623-75345642 | Msa0043850:intron | 30.0% | |
| AGATAACATAAAATAGTGGC+GGG | - | chr1_1:75345657-75345676 | None:intergenic | 30.0% | |
| CAGATAACATAAAATAGTGG+CGG | - | chr1_1:75345658-75345677 | None:intergenic | 30.0% | |
| GCACAGATAACATAAAATAG+TGG | - | chr1_1:75345661-75345680 | None:intergenic | 30.0% | |
| ! | CTATTTTATGTTATCTGTGC+AGG | + | chr1_1:75345661-75345680 | Msa0043850:intron | 30.0% |
| GCATATGGGTATTCAAATTA+TGG | + | chr1_1:75345987-75346006 | Msa0043850:CDS | 30.0% | |
| GCACTATATACAAAATCACA+CGG | - | chr1_1:75346039-75346058 | None:intergenic | 30.0% | |
| AACGACAAAATAGATGTATC+GGG | + | chr1_1:75344441-75344460 | Msa0043850:exon | 30.0% | |
| ! | GATATACTGGAAATTGATTC+GGG | + | chr1_1:75344670-75344689 | Msa0043850:CDS | 30.0% |
| TCTTCGAATCAAATTTCGTT+TGG | + | chr1_1:75344760-75344779 | Msa0043850:CDS | 30.0% | |
| !! | GATGCCATAATTTTAAGGAA+TGG | + | chr1_1:75344983-75345002 | Msa0043850:intron | 30.0% |
| !! | AGGTTCTAAAAAGTGTATTG+CGG | - | chr1_1:75345371-75345390 | None:intergenic | 30.0% |
| !! | TAGAACCTATCACTTTTGAT+CGG | + | chr1_1:75345383-75345402 | Msa0043850:intron | 30.0% |
| TATTACCGATCAAAAGTGAT+AGG | - | chr1_1:75345391-75345410 | None:intergenic | 30.0% | |
| TACAAAATGTCCTTGAATAG+AGG | + | chr1_1:75345421-75345440 | Msa0043850:intron | 30.0% | |
| ! | CCTTGTTTAACATAAAACAG+CGG | - | chr1_1:75345492-75345511 | None:intergenic | 30.0% |
| ACACTAGCAATTTAACATAG+AGG | + | chr1_1:75345623-75345642 | Msa0043850:intron | 30.0% | |
| AGATAACATAAAATAGTGGC+GGG | - | chr1_1:75345657-75345676 | None:intergenic | 30.0% | |
| CAGATAACATAAAATAGTGG+CGG | - | chr1_1:75345658-75345677 | None:intergenic | 30.0% | |
| GCACAGATAACATAAAATAG+TGG | - | chr1_1:75345661-75345680 | None:intergenic | 30.0% | |
| ! | CTATTTTATGTTATCTGTGC+AGG | + | chr1_1:75345661-75345680 | Msa0043850:intron | 30.0% |
| GCATATGGGTATTCAAATTA+TGG | + | chr1_1:75345987-75346006 | Msa0043850:CDS | 30.0% | |
| GCACTATATACAAAATCACA+CGG | - | chr1_1:75346039-75346058 | None:intergenic | 30.0% | |
| ! | GTTGAATTCAAAAGGTGTGA+TGG | - | chr1_1:75344415-75344434 | None:intergenic | 35.0% |
| ! | AGCTTTGGTTCATGATATAC+TGG | + | chr1_1:75344657-75344676 | Msa0043850:CDS | 35.0% |
| ! | GTCTAAACCCTCAAATTTTG+TGG | + | chr1_1:75345222-75345241 | Msa0043850:intron | 35.0% |
| GAGCAAACCACAAAATTTGA+GGG | - | chr1_1:75345232-75345251 | None:intergenic | 35.0% | |
| TGAGCAAACCACAAAATTTG+AGG | - | chr1_1:75345233-75345252 | None:intergenic | 35.0% | |
| GTTTAACATAAAACAGCGGT+GGG | - | chr1_1:75345488-75345507 | None:intergenic | 35.0% | |
| TGTTTAACATAAAACAGCGG+TGG | - | chr1_1:75345489-75345508 | None:intergenic | 35.0% | |
| !! | CCGCTGTTTTATGTTAAACA+AGG | + | chr1_1:75345489-75345508 | Msa0043850:intron | 35.0% |
| TGTTAAACAAGGATGTCAAG+TGG | + | chr1_1:75345500-75345519 | Msa0043850:intron | 35.0% | |
| TTATTGGGCTGACCAAATTT+GGG | + | chr1_1:75345691-75345710 | Msa0043850:CDS | 35.0% | |
| !!! | GAAGAAAGTACTTTTGAGCA+TGG | - | chr1_1:75345782-75345801 | None:intergenic | 35.0% |
| TATTCATGACATTACATCGG+TGG | + | chr1_1:75345839-75345858 | Msa0043850:CDS | 35.0% | |
| AGGATCAAATGAGTGCATAT+GGG | + | chr1_1:75345973-75345992 | Msa0043850:CDS | 35.0% | |
| ! | GTTGAATTCAAAAGGTGTGA+TGG | - | chr1_1:75344415-75344434 | None:intergenic | 35.0% |
| ! | AGCTTTGGTTCATGATATAC+TGG | + | chr1_1:75344657-75344676 | Msa0043850:CDS | 35.0% |
| ! | GTCTAAACCCTCAAATTTTG+TGG | + | chr1_1:75345222-75345241 | Msa0043850:intron | 35.0% |
| GAGCAAACCACAAAATTTGA+GGG | - | chr1_1:75345232-75345251 | None:intergenic | 35.0% | |
| TGAGCAAACCACAAAATTTG+AGG | - | chr1_1:75345233-75345252 | None:intergenic | 35.0% | |
| GTTTAACATAAAACAGCGGT+GGG | - | chr1_1:75345488-75345507 | None:intergenic | 35.0% | |
| TGTTTAACATAAAACAGCGG+TGG | - | chr1_1:75345489-75345508 | None:intergenic | 35.0% | |
| !! | CCGCTGTTTTATGTTAAACA+AGG | + | chr1_1:75345489-75345508 | Msa0043850:intron | 35.0% |
| TGTTAAACAAGGATGTCAAG+TGG | + | chr1_1:75345500-75345519 | Msa0043850:intron | 35.0% | |
| TTATTGGGCTGACCAAATTT+GGG | + | chr1_1:75345691-75345710 | Msa0043850:CDS | 35.0% | |
| !!! | GAAGAAAGTACTTTTGAGCA+TGG | - | chr1_1:75345782-75345801 | None:intergenic | 35.0% |
| TATTCATGACATTACATCGG+TGG | + | chr1_1:75345839-75345858 | Msa0043850:CDS | 35.0% | |
| AGGATCAAATGAGTGCATAT+GGG | + | chr1_1:75345973-75345992 | Msa0043850:CDS | 35.0% | |
| TAAGTCTGCGACGGAAATTA+GGG | + | chr1_1:75344624-75344643 | Msa0043850:CDS | 40.0% | |
| TAGGGATCACTATGAAGCTT+TGG | + | chr1_1:75344642-75344661 | Msa0043850:CDS | 40.0% | |
| !! | TACTGGAAATTGATTCGGGT+CGG | + | chr1_1:75344674-75344693 | Msa0043850:CDS | 40.0% |
| GCCGAGTTATTCTGATGAAT+CGG | + | chr1_1:75344705-75344724 | Msa0043850:CDS | 40.0% | |
| ! | GCCGATTCATCAGAATAACT+CGG | - | chr1_1:75344709-75344728 | None:intergenic | 40.0% |
| !!! | AATCTTTTTTGGGGGGTTTC+TGG | + | chr1_1:75345024-75345043 | Msa0043850:intron | 40.0% |
| !!! | ATCTTTTTTGGGGGGTTTCT+GGG | + | chr1_1:75345025-75345044 | Msa0043850:intron | 40.0% |
| TAAACAAGGATGTCAAGTGG+CGG | + | chr1_1:75345503-75345522 | Msa0043850:intron | 40.0% | |
| !! | TGTGCAGGCTGTTTCTTATT+GGG | + | chr1_1:75345676-75345695 | Msa0043850:intron | 40.0% |
| CTTATTGGGCTGACCAAATT+TGG | + | chr1_1:75345690-75345709 | Msa0043850:CDS | 40.0% | |
| CCAATCTCCTTTCCCAAATT+TGG | - | chr1_1:75345706-75345725 | None:intergenic | 40.0% | |
| CCAAATTTGGGAAAGGAGAT+TGG | + | chr1_1:75345703-75345722 | Msa0043850:CDS | 40.0% | |
| !! | GAGATTGGAGAAGCATTTCA+AGG | + | chr1_1:75345718-75345737 | Msa0043850:CDS | 40.0% |
| GTACTTTCTTCGCCAGAATT+CGG | + | chr1_1:75345791-75345810 | Msa0043850:CDS | 40.0% | |
| TCTCTTTCTTCACCGAATTC+TGG | - | chr1_1:75345806-75345825 | None:intergenic | 40.0% | |
| ! | AGAATTCGGTGAAGAAAGAG+AGG | + | chr1_1:75345805-75345824 | Msa0043850:CDS | 40.0% |
| TGTGCCTATTGATCAGAACT+GGG | + | chr1_1:75345878-75345897 | Msa0043850:CDS | 40.0% | |
| TTATCCGTCAAACGATTTGC+AGG | + | chr1_1:75345953-75345972 | Msa0043850:CDS | 40.0% | |
| TGATCCTGCAAATCGTTTGA+CGG | - | chr1_1:75345960-75345979 | None:intergenic | 40.0% | |
| CAGGATCAAATGAGTGCATA+TGG | + | chr1_1:75345972-75345991 | Msa0043850:CDS | 40.0% | |
| TGCTAGTTGACAGAGTAACT+AGG | + | chr1_1:75346104-75346123 | Msa0043850:three_prime_UTR | 40.0% | |
| TAAGTCTGCGACGGAAATTA+GGG | + | chr1_1:75344624-75344643 | Msa0043850:CDS | 40.0% | |
| TAGGGATCACTATGAAGCTT+TGG | + | chr1_1:75344642-75344661 | Msa0043850:CDS | 40.0% | |
| !! | TACTGGAAATTGATTCGGGT+CGG | + | chr1_1:75344674-75344693 | Msa0043850:CDS | 40.0% |
| GCCGAGTTATTCTGATGAAT+CGG | + | chr1_1:75344705-75344724 | Msa0043850:CDS | 40.0% | |
| ! | GCCGATTCATCAGAATAACT+CGG | - | chr1_1:75344709-75344728 | None:intergenic | 40.0% |
| !!! | AATCTTTTTTGGGGGGTTTC+TGG | + | chr1_1:75345024-75345043 | Msa0043850:intron | 40.0% |
| !!! | ATCTTTTTTGGGGGGTTTCT+GGG | + | chr1_1:75345025-75345044 | Msa0043850:intron | 40.0% |
| TAAACAAGGATGTCAAGTGG+CGG | + | chr1_1:75345503-75345522 | Msa0043850:intron | 40.0% | |
| !! | TGTGCAGGCTGTTTCTTATT+GGG | + | chr1_1:75345676-75345695 | Msa0043850:intron | 40.0% |
| CTTATTGGGCTGACCAAATT+TGG | + | chr1_1:75345690-75345709 | Msa0043850:CDS | 40.0% | |
| CCAATCTCCTTTCCCAAATT+TGG | - | chr1_1:75345706-75345725 | None:intergenic | 40.0% | |
| CCAAATTTGGGAAAGGAGAT+TGG | + | chr1_1:75345703-75345722 | Msa0043850:CDS | 40.0% | |
| !! | GAGATTGGAGAAGCATTTCA+AGG | + | chr1_1:75345718-75345737 | Msa0043850:CDS | 40.0% |
| GTACTTTCTTCGCCAGAATT+CGG | + | chr1_1:75345791-75345810 | Msa0043850:CDS | 40.0% | |
| TCTCTTTCTTCACCGAATTC+TGG | - | chr1_1:75345806-75345825 | None:intergenic | 40.0% | |
| ! | AGAATTCGGTGAAGAAAGAG+AGG | + | chr1_1:75345805-75345824 | Msa0043850:CDS | 40.0% |
| TGTGCCTATTGATCAGAACT+GGG | + | chr1_1:75345878-75345897 | Msa0043850:CDS | 40.0% | |
| TTATCCGTCAAACGATTTGC+AGG | + | chr1_1:75345953-75345972 | Msa0043850:CDS | 40.0% | |
| TGATCCTGCAAATCGTTTGA+CGG | - | chr1_1:75345960-75345979 | None:intergenic | 40.0% | |
| CAGGATCAAATGAGTGCATA+TGG | + | chr1_1:75345972-75345991 | Msa0043850:CDS | 40.0% | |
| TGCTAGTTGACAGAGTAACT+AGG | + | chr1_1:75346104-75346123 | Msa0043850:three_prime_UTR | 40.0% | |
| GTAAGTCTGCGACGGAAATT+AGG | + | chr1_1:75344623-75344642 | Msa0043850:CDS | 45.0% | |
| !! | ACTGGAAATTGATTCGGGTC+GGG | + | chr1_1:75344675-75344694 | Msa0043850:CDS | 45.0% |
| ! | GGTGATAACGAGAGGAAGAA+AGG | + | chr1_1:75344802-75344821 | Msa0043850:CDS | 45.0% |
| AGAGGAAGAAAGGAACTCCA+TGG | + | chr1_1:75344812-75344831 | Msa0043850:CDS | 45.0% | |
| CTGTGTTCTTCTTCAGTCCA+TGG | - | chr1_1:75344832-75344851 | None:intergenic | 45.0% | |
| ! | CATGGACTGAAGAAGAACAC+AGG | + | chr1_1:75344830-75344849 | Msa0043850:CDS | 45.0% |
| ATGTCAAATAGCGGTTGCAG+TGG | + | chr1_1:75345306-75345325 | Msa0043850:intron | 45.0% | |
| GTCGGTATAGCCTCTATTCA+AGG | - | chr1_1:75345434-75345453 | None:intergenic | 45.0% | |
| !! | CTGTGCAGGCTGTTTCTTAT+TGG | + | chr1_1:75345675-75345694 | Msa0043850:intron | 45.0% |
| TGTGACAAGAACACCAACTC+AGG | + | chr1_1:75345749-75345768 | Msa0043850:CDS | 45.0% | |
| ! | CAGTTCTGATCAATAGGCAC+AGG | - | chr1_1:75345879-75345898 | None:intergenic | 45.0% |
| CTGTGCCTATTGATCAGAAC+TGG | + | chr1_1:75345877-75345896 | Msa0043850:CDS | 45.0% | |
| ! | GGAACCCAGTTCTGATCAAT+AGG | - | chr1_1:75345885-75345904 | None:intergenic | 45.0% |
| GTAAGTCTGCGACGGAAATT+AGG | + | chr1_1:75344623-75344642 | Msa0043850:CDS | 45.0% | |
| !! | ACTGGAAATTGATTCGGGTC+GGG | + | chr1_1:75344675-75344694 | Msa0043850:CDS | 45.0% |
| ! | GGTGATAACGAGAGGAAGAA+AGG | + | chr1_1:75344802-75344821 | Msa0043850:CDS | 45.0% |
| AGAGGAAGAAAGGAACTCCA+TGG | + | chr1_1:75344812-75344831 | Msa0043850:CDS | 45.0% | |
| CTGTGTTCTTCTTCAGTCCA+TGG | - | chr1_1:75344832-75344851 | None:intergenic | 45.0% | |
| ! | CATGGACTGAAGAAGAACAC+AGG | + | chr1_1:75344830-75344849 | Msa0043850:CDS | 45.0% |
| ATGTCAAATAGCGGTTGCAG+TGG | + | chr1_1:75345306-75345325 | Msa0043850:intron | 45.0% | |
| GTCGGTATAGCCTCTATTCA+AGG | - | chr1_1:75345434-75345453 | None:intergenic | 45.0% | |
| !! | CTGTGCAGGCTGTTTCTTAT+TGG | + | chr1_1:75345675-75345694 | Msa0043850:intron | 45.0% |
| TGTGACAAGAACACCAACTC+AGG | + | chr1_1:75345749-75345768 | Msa0043850:CDS | 45.0% | |
| ! | CAGTTCTGATCAATAGGCAC+AGG | - | chr1_1:75345879-75345898 | None:intergenic | 45.0% |
| CTGTGCCTATTGATCAGAAC+TGG | + | chr1_1:75345877-75345896 | Msa0043850:CDS | 45.0% | |
| ! | GGAACCCAGTTCTGATCAAT+AGG | - | chr1_1:75345885-75345904 | None:intergenic | 45.0% |
| !!! | AATTTAATTTTAATCTTTTT+TGG | + | chr1_1:75345013-75345032 | Msa0043850:intron | 5.0% |
| !!! | ATTTAATTTTAATCTTTTTT+GGG | + | chr1_1:75345014-75345033 | Msa0043850:intron | 5.0% |
| !!! | AATTTAATTTTAATCTTTTT+TGG | + | chr1_1:75345013-75345032 | Msa0043850:intron | 5.0% |
| !!! | ATTTAATTTTAATCTTTTTT+GGG | + | chr1_1:75345014-75345033 | Msa0043850:intron | 5.0% |
| GTATCGGGAGTCAGTTGCTA+TGG | + | chr1_1:75344456-75344475 | Msa0043850:CDS | 50.0% | |
| !! | GTCCACTGAGTTGGTTGAGT+CGG | - | chr1_1:75344511-75344530 | None:intergenic | 50.0% |
| AAGATCGCGGAACAAGTTCC+AGG | + | chr1_1:75344601-75344620 | Msa0043850:CDS | 50.0% | |
| AGTTCCAGGTAAGTCTGCGA+CGG | + | chr1_1:75344615-75344634 | Msa0043850:CDS | 50.0% | |
| ATTTCCGTCGCAGACTTACC+TGG | - | chr1_1:75344622-75344641 | None:intergenic | 50.0% | |
| !! | AATTGATTCGGGTCGGGTTG+AGG | + | chr1_1:75344681-75344700 | Msa0043850:CDS | 50.0% |
| TCTGATGAATCGGCTGTGAG+TGG | + | chr1_1:75344715-75344734 | Msa0043850:CDS | 50.0% | |
| !! | TGGTGGTGGATTGGCTGAAT+GGG | + | chr1_1:75344735-75344754 | Msa0043850:CDS | 50.0% |
| ! | TTTGGTTCGAAGCCGAGACA+TGG | + | chr1_1:75344778-75344797 | Msa0043850:CDS | 50.0% |
| TCGTTATCACCGCCATGTCT+CGG | - | chr1_1:75344793-75344812 | None:intergenic | 50.0% | |
| GGGCTGACCAAATTTGGGAA+AGG | + | chr1_1:75345696-75345715 | Msa0043850:CDS | 50.0% | |
| GACAAGAACACCAACTCAGG+TGG | + | chr1_1:75345752-75345771 | Msa0043850:CDS | 50.0% | |
| TGTTGCATTGAACCACCACC+AGG | - | chr1_1:75345912-75345931 | None:intergenic | 50.0% | |
| GTATCGGGAGTCAGTTGCTA+TGG | + | chr1_1:75344456-75344475 | Msa0043850:CDS | 50.0% | |
| !! | GTCCACTGAGTTGGTTGAGT+CGG | - | chr1_1:75344511-75344530 | None:intergenic | 50.0% |
| AAGATCGCGGAACAAGTTCC+AGG | + | chr1_1:75344601-75344620 | Msa0043850:CDS | 50.0% | |
| AGTTCCAGGTAAGTCTGCGA+CGG | + | chr1_1:75344615-75344634 | Msa0043850:CDS | 50.0% | |
| ATTTCCGTCGCAGACTTACC+TGG | - | chr1_1:75344622-75344641 | None:intergenic | 50.0% | |
| !! | AATTGATTCGGGTCGGGTTG+AGG | + | chr1_1:75344681-75344700 | Msa0043850:CDS | 50.0% |
| TCTGATGAATCGGCTGTGAG+TGG | + | chr1_1:75344715-75344734 | Msa0043850:CDS | 50.0% | |
| !! | TGGTGGTGGATTGGCTGAAT+GGG | + | chr1_1:75344735-75344754 | Msa0043850:CDS | 50.0% |
| ! | TTTGGTTCGAAGCCGAGACA+TGG | + | chr1_1:75344778-75344797 | Msa0043850:CDS | 50.0% |
| TCGTTATCACCGCCATGTCT+CGG | - | chr1_1:75344793-75344812 | None:intergenic | 50.0% | |
| GGGCTGACCAAATTTGGGAA+AGG | + | chr1_1:75345696-75345715 | Msa0043850:CDS | 50.0% | |
| GACAAGAACACCAACTCAGG+TGG | + | chr1_1:75345752-75345771 | Msa0043850:CDS | 50.0% | |
| TGTTGCATTGAACCACCACC+AGG | - | chr1_1:75345912-75345931 | None:intergenic | 50.0% | |
| TGGTCTCGAGTCCACTGAGT+TGG | - | chr1_1:75344520-75344539 | None:intergenic | 55.0% | |
| CTCGCTCGAACAGCTTGTCA+TGG | - | chr1_1:75344540-75344559 | None:intergenic | 55.0% | |
| GTTCGAGCGAGCTCTGTTGA+TGG | + | chr1_1:75344549-75344568 | Msa0043850:CDS | 55.0% | |
| ! | GATGGTGCCGGAGGATTTAC+CGG | + | chr1_1:75344567-75344586 | Msa0043850:CDS | 55.0% |
| GATGAATCGGCTGTGAGTGG+TGG | + | chr1_1:75344718-75344737 | Msa0043850:CDS | 55.0% | |
| !! | GTGGTGGTGGATTGGCTGAA+TGG | + | chr1_1:75344734-75344753 | Msa0043850:CDS | 55.0% |
| ! | GACATGGCGGTGATAACGAG+AGG | + | chr1_1:75344794-75344813 | Msa0043850:CDS | 55.0% |
| ATTGAACCACCACCAGGAGG+AGG | - | chr1_1:75345906-75345925 | None:intergenic | 55.0% | |
| TGCATTGAACCACCACCAGG+AGG | - | chr1_1:75345909-75345928 | None:intergenic | 55.0% | |
| TGGTCTCGAGTCCACTGAGT+TGG | - | chr1_1:75344520-75344539 | None:intergenic | 55.0% | |
| CTCGCTCGAACAGCTTGTCA+TGG | - | chr1_1:75344540-75344559 | None:intergenic | 55.0% | |
| GTTCGAGCGAGCTCTGTTGA+TGG | + | chr1_1:75344549-75344568 | Msa0043850:CDS | 55.0% | |
| ! | GATGGTGCCGGAGGATTTAC+CGG | + | chr1_1:75344567-75344586 | Msa0043850:CDS | 55.0% |
| GATGAATCGGCTGTGAGTGG+TGG | + | chr1_1:75344718-75344737 | Msa0043850:CDS | 55.0% | |
| !! | GTGGTGGTGGATTGGCTGAA+TGG | + | chr1_1:75344734-75344753 | Msa0043850:CDS | 55.0% |
| ! | GACATGGCGGTGATAACGAG+AGG | + | chr1_1:75344794-75344813 | Msa0043850:CDS | 55.0% |
| ATTGAACCACCACCAGGAGG+AGG | - | chr1_1:75345906-75345925 | None:intergenic | 55.0% | |
| TGCATTGAACCACCACCAGG+AGG | - | chr1_1:75345909-75345928 | None:intergenic | 55.0% | |
| ! | GGCCGACTCAACCAACTCAG+TGG | + | chr1_1:75344506-75344525 | Msa0043850:CDS | 60.0% |
| !! | GCGAGCTCTGTTGATGGTGC+CGG | + | chr1_1:75344555-75344574 | Msa0043850:CDS | 60.0% |
| !! | AGCTCTGTTGATGGTGCCGG+AGG | + | chr1_1:75344558-75344577 | Msa0043850:CDS | 60.0% |
| TGCCGGAGGATTTACCGGAC+CGG | + | chr1_1:75344572-75344591 | Msa0043850:CDS | 60.0% | |
| CACCGGTCCGGTAAATCCTC+CGG | - | chr1_1:75344577-75344596 | None:intergenic | 60.0% | |
| GGAGGATTTACCGGACCGGT+GGG | + | chr1_1:75344576-75344595 | Msa0043850:CDS | 60.0% | |
| GTTCCGCGATCTTCTCCCAC+CGG | - | chr1_1:75344594-75344613 | None:intergenic | 60.0% | |
| GAATCGGCTGTGAGTGGTGG+TGG | + | chr1_1:75344721-75344740 | Msa0043850:CDS | 60.0% | |
| !! | GGCTGTGAGTGGTGGTGGAT+TGG | + | chr1_1:75344726-75344745 | Msa0043850:CDS | 60.0% |
| GGTTCGAAGCCGAGACATGG+CGG | + | chr1_1:75344781-75344800 | Msa0043850:CDS | 60.0% | |
| ! | GCATGGCTAGCCACCTGAGT+TGG | - | chr1_1:75345765-75345784 | None:intergenic | 60.0% |
| CAGAACTGGGTTCCTCCTCC+TGG | + | chr1_1:75345891-75345910 | Msa0043850:CDS | 60.0% | |
| AACTGGGTTCCTCCTCCTGG+TGG | + | chr1_1:75345894-75345913 | Msa0043850:CDS | 60.0% | |
| ! | GGCCGACTCAACCAACTCAG+TGG | + | chr1_1:75344506-75344525 | Msa0043850:CDS | 60.0% |
| !! | GCGAGCTCTGTTGATGGTGC+CGG | + | chr1_1:75344555-75344574 | Msa0043850:CDS | 60.0% |
| !! | AGCTCTGTTGATGGTGCCGG+AGG | + | chr1_1:75344558-75344577 | Msa0043850:CDS | 60.0% |
| TGCCGGAGGATTTACCGGAC+CGG | + | chr1_1:75344572-75344591 | Msa0043850:CDS | 60.0% | |
| CACCGGTCCGGTAAATCCTC+CGG | - | chr1_1:75344577-75344596 | None:intergenic | 60.0% | |
| GGAGGATTTACCGGACCGGT+GGG | + | chr1_1:75344576-75344595 | Msa0043850:CDS | 60.0% | |
| GTTCCGCGATCTTCTCCCAC+CGG | - | chr1_1:75344594-75344613 | None:intergenic | 60.0% | |
| GAATCGGCTGTGAGTGGTGG+TGG | + | chr1_1:75344721-75344740 | Msa0043850:CDS | 60.0% | |
| !! | GGCTGTGAGTGGTGGTGGAT+TGG | + | chr1_1:75344726-75344745 | Msa0043850:CDS | 60.0% |
| GGTTCGAAGCCGAGACATGG+CGG | + | chr1_1:75344781-75344800 | Msa0043850:CDS | 60.0% | |
| ! | GCATGGCTAGCCACCTGAGT+TGG | - | chr1_1:75345765-75345784 | None:intergenic | 60.0% |
| CAGAACTGGGTTCCTCCTCC+TGG | + | chr1_1:75345891-75345910 | Msa0043850:CDS | 60.0% | |
| AACTGGGTTCCTCCTCCTGG+TGG | + | chr1_1:75345894-75345913 | Msa0043850:CDS | 60.0% | |
| CGGAGGATTTACCGGACCGG+TGG | + | chr1_1:75344575-75344594 | Msa0043850:CDS | 65.0% | |
| GCGATCTTCTCCCACCGGTC+CGG | - | chr1_1:75344589-75344608 | None:intergenic | 65.0% | |
| GGACCGGTGGGAGAAGATCG+CGG | + | chr1_1:75344588-75344607 | Msa0043850:CDS | 65.0% | |
| TGGGTTCCTCCTCCTGGTGG+TGG | + | chr1_1:75345897-75345916 | Msa0043850:CDS | 65.0% | |
| CGGAGGATTTACCGGACCGG+TGG | + | chr1_1:75344575-75344594 | Msa0043850:CDS | 65.0% | |
| GCGATCTTCTCCCACCGGTC+CGG | - | chr1_1:75344589-75344608 | None:intergenic | 65.0% | |
| GGACCGGTGGGAGAAGATCG+CGG | + | chr1_1:75344588-75344607 | Msa0043850:CDS | 65.0% | |
| TGGGTTCCTCCTCCTGGTGG+TGG | + | chr1_1:75345897-75345916 | Msa0043850:CDS | 65.0% | |
| TTGAGTCGGCCACCGCGTCG+TGG | - | chr1_1:75344497-75344516 | None:intergenic | 70.0% | |
| TTGAGTCGGCCACCGCGTCG+TGG | - | chr1_1:75344497-75344516 | None:intergenic | 70.0% | |
| AGTCGGCCACCGCGTCGTGG+CGG | - | chr1_1:75344494-75344513 | None:intergenic | 75.0% | |
| AGTCGGCCACCGCGTCGTGG+CGG | - | chr1_1:75344494-75344513 | None:intergenic | 75.0% | |
| ! | CCACCACCGCCGCCACGACG+CGG | + | chr1_1:75344482-75344501 | Msa0043850:CDS | 80.0% |
| ! | CCACCACCGCCGCCACGACG+CGG | + | chr1_1:75344482-75344501 | Msa0043850:CDS | 80.0% |
| ! | CCGCGTCGTGGCGGCGGTGG+TGG | - | chr1_1:75344485-75344504 | None:intergenic | 85.0% |
| ! | CCACCGCGTCGTGGCGGCGG+TGG | - | chr1_1:75344488-75344507 | None:intergenic | 85.0% |
| ! | CCACCGCCGCCACGACGCGG+TGG | + | chr1_1:75344485-75344504 | Msa0043850:CDS | 85.0% |
| ! | CGGCCACCGCGTCGTGGCGG+CGG | - | chr1_1:75344491-75344510 | None:intergenic | 85.0% |
| ! | CCGCGTCGTGGCGGCGGTGG+TGG | - | chr1_1:75344485-75344504 | None:intergenic | 85.0% |
| ! | CCACCGCGTCGTGGCGGCGG+TGG | - | chr1_1:75344488-75344507 | None:intergenic | 85.0% |
| ! | CCACCGCCGCCACGACGCGG+TGG | + | chr1_1:75344485-75344504 | Msa0043850:CDS | 85.0% |
| ! | CGGCCACCGCGTCGTGGCGG+CGG | - | chr1_1:75344491-75344510 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 75344341 | 75346235 | 75344341 | ID=Msa0043850;Name=Msa0043850 |
| chr1_1 | mRNA | 75344341 | 75346235 | 75344341 | ID=Msa0043850-mRNA-1;Parent=Msa0043850;Name=Msa0043850-mRNA-1;_AED=0.01;_eAED=0.01;_QI=113|1|1|1|1|1|2|213|245 |
| chr1_1 | exon | 75344341 | 75344851 | 75344341 | ID=Msa0043850-mRNA-1:exon:25386;Parent=Msa0043850-mRNA-1 |
| chr1_1 | exon | 75345683 | 75346235 | 75345683 | ID=Msa0043850-mRNA-1:exon:25387;Parent=Msa0043850-mRNA-1 |
| chr1_1 | five_prime_UTR | 75344341 | 75344453 | 75344341 | ID=Msa0043850-mRNA-1:five_prime_utr;Parent=Msa0043850-mRNA-1 |
| chr1_1 | CDS | 75344454 | 75344851 | 75344454 | ID=Msa0043850-mRNA-1:cds;Parent=Msa0043850-mRNA-1 |
| chr1_1 | CDS | 75345683 | 75346022 | 75345683 | ID=Msa0043850-mRNA-1:cds;Parent=Msa0043850-mRNA-1 |
| chr1_1 | three_prime_UTR | 75346023 | 75346235 | 75346023 | ID=Msa0043850-mRNA-1:three_prime_utr;Parent=Msa0043850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
