Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082050 | XP_039685750.1 | 96.434 | 701 | 20 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082050 | sp|F4HXL0|PLIP2_ARATH | 57.280 | 728 | 266 | 13 | 1 | 698 | 1 | 713 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082050 | A0A396JY70 | 96.434 | 701 | 20 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1393 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004480 | Msa0082050 | 0.801744 | 7.791973e-49 | -8.615850e-47 |
| Msa0017320 | Msa0082050 | 0.821525 | 3.854861e-53 | -8.615850e-47 |
| Msa0030480 | Msa0082050 | 0.994238 | 1.201506e-205 | -8.615850e-47 |
| Msa0030530 | Msa0082050 | 0.982090 | 3.328237e-154 | -8.615850e-47 |
| Msa0045550 | Msa0082050 | 0.807314 | 5.369940e-50 | -8.615850e-47 |
| Msa0047640 | Msa0082050 | 0.821865 | 3.217428e-53 | -8.615850e-47 |
| Msa0051740 | Msa0082050 | 0.804553 | 2.044435e-49 | -8.615850e-47 |
| Msa0071480 | Msa0082050 | 0.820926 | 5.297498e-53 | -8.615850e-47 |
| Msa0081650 | Msa0082050 | 0.801638 | 8.194106e-49 | -8.615850e-47 |
| Msa0081940 | Msa0082050 | 0.980792 | 4.812150e-151 | -8.615850e-47 |
| Msa0082050 | Msa0090510 | 0.804210 | 2.409659e-49 | -8.615850e-47 |
| Msa0082050 | Msa0119440 | 0.825732 | 3.991913e-54 | -8.615850e-47 |
| Msa0082050 | Msa0128430 | 0.972163 | 2.547147e-134 | -8.615850e-47 |
| Msa0082050 | Msa0136630 | 0.816658 | 4.935639e-52 | -8.615850e-47 |
| Msa0082050 | Msa0137510 | 0.824205 | 9.155412e-54 | -8.615850e-47 |
| Msa0082050 | Msa0139670 | 0.810886 | 9.220161e-51 | -8.615850e-47 |
| Msa0082050 | Msa0144430 | 0.817171 | 3.787726e-52 | -8.615850e-47 |
| Msa0082050 | Msa0146080 | 0.815528 | 8.826857e-52 | -8.615850e-47 |
| Msa0082050 | Msa0171980 | 0.825318 | 5.004302e-54 | -8.615850e-47 |
| Msa0082050 | Msa0174260 | 0.800479 | 1.413968e-48 | -8.615850e-47 |
| Msa0082050 | Msa0183910 | 0.804468 | 2.128970e-49 | -8.615850e-47 |
| Msa0082050 | Msa0187490 | 0.806485 | 8.041403e-50 | -8.615850e-47 |
| Msa0082050 | Msa0194010 | 0.810158 | 1.324711e-50 | -8.615850e-47 |
| Msa0082050 | Msa0210260 | 0.801889 | 7.276596e-49 | -8.615850e-47 |
| Msa0082050 | Msa0213430 | 0.830843 | 2.336885e-55 | -8.615850e-47 |
| Msa0082050 | Msa0235880 | 0.820215 | 7.717309e-53 | -8.615850e-47 |
| Msa0082050 | Msa0240270 | 0.816011 | 6.889893e-52 | -8.615850e-47 |
| Msa0082050 | Msa0244970 | 0.802975 | 4.346148e-49 | -8.615850e-47 |
| Msa0082050 | Msa0259440 | 0.834490 | 2.909049e-56 | -8.615850e-47 |
| Msa0082050 | Msa0259580 | 0.832330 | 1.005409e-55 | -8.615850e-47 |
| Msa0082050 | Msa0284240 | 0.806560 | 7.752672e-50 | -8.615850e-47 |
| Msa0082050 | Msa0305620 | 0.822676 | 2.085131e-53 | -8.615850e-47 |
| Msa0082050 | Msa0347990 | 0.802364 | 5.809468e-49 | -8.615850e-47 |
| Msa0082050 | Msa0358110 | 0.825308 | 5.031139e-54 | -8.615850e-47 |
| Msa0082050 | Msa0376600 | 0.803553 | 3.299292e-49 | -8.615850e-47 |
| Msa0082050 | Msa0380600 | 0.821825 | 3.286712e-53 | -8.615850e-47 |
| Msa0082050 | Msa0382310 | 0.834584 | 2.754790e-56 | -8.615850e-47 |
| Msa0082050 | Msa0382370 | 0.812654 | 3.802412e-51 | -8.615850e-47 |
| Msa0082050 | Msa0403490 | 0.836571 | 8.657734e-57 | -8.615850e-47 |
| Msa0082050 | Msa0418400 | 0.819451 | 1.153206e-52 | -8.615850e-47 |
| Msa0082050 | Msa0427580 | 0.809334 | 1.992333e-50 | -8.615850e-47 |
| Msa0082050 | Msa0430060 | 0.804932 | 1.703787e-49 | -8.615850e-47 |
| Msa0082050 | Msa0430240 | 0.825165 | 5.439769e-54 | -8.615850e-47 |
| Msa0082050 | Msa0431210 | 0.828843 | 7.175070e-55 | -8.615850e-47 |
| Msa0082050 | Msa0472710 | 0.830360 | 3.068692e-55 | -8.615850e-47 |
| Msa0082050 | Msa0472770 | 0.841253 | 5.314398e-58 | -8.615850e-47 |
| Msa0082050 | Msa0482940 | 0.806497 | 7.992361e-50 | -8.615850e-47 |
| Msa0082050 | Msa0518170 | 0.806742 | 7.097351e-50 | -8.615850e-47 |
| Msa0082050 | Msa0520270 | 0.827381 | 1.614478e-54 | -8.615850e-47 |
| Msa0082050 | Msa0538160 | 0.801646 | 8.163679e-49 | -8.615850e-47 |
| Msa0082050 | Msa0544730 | 0.812974 | 3.235977e-51 | -8.615850e-47 |
| Msa0082050 | Msa0560500 | 0.805355 | 1.389464e-49 | -8.615850e-47 |
| Msa0082050 | Msa0569780 | 0.803161 | 3.977895e-49 | -8.615850e-47 |
| Msa0082050 | Msa0572750 | 0.805321 | 1.412447e-49 | -8.615850e-47 |
| Msa0082050 | Msa0583670 | 0.977738 | 2.199427e-144 | -8.615850e-47 |
| Msa0082050 | Msa0597770 | 0.803365 | 3.609667e-49 | -8.615850e-47 |
| Msa0082050 | Msa0608270 | 0.802837 | 4.640853e-49 | -8.615850e-47 |
| Msa0082050 | Msa0641340 | 0.808984 | 2.367215e-50 | -8.615850e-47 |
| Msa0082050 | Msa0648830 | 0.806441 | 8.215401e-50 | -8.615850e-47 |
| Msa0082050 | Msa0658680 | 0.808620 | 2.832627e-50 | -8.615850e-47 |
| Msa0082050 | Msa0665520 | 0.801448 | 8.960625e-49 | -8.615850e-47 |
| Msa0082050 | Msa0697720 | 0.802350 | 5.849509e-49 | -8.615850e-47 |
| Msa0082050 | Msa0705390 | 0.807844 | 4.145163e-50 | -8.615850e-47 |
| Msa0082050 | Msa0709120 | 0.810621 | 1.052167e-50 | -8.615850e-47 |
| Msa0082050 | Msa0724370 | 0.815053 | 1.125672e-51 | -8.615850e-47 |
| Msa0082050 | Msa0748660 | 0.818773 | 1.645080e-52 | -8.615850e-47 |
| Msa0082050 | Msa0758250 | 0.860197 | 2.442291e-63 | -8.615850e-47 |
| Msa0082050 | Msa0764920 | 0.800015 | 1.757199e-48 | -8.615850e-47 |
| Msa0082050 | Msa0789560 | 0.818669 | 1.737228e-52 | -8.615850e-47 |
| Msa0082050 | Msa0799620 | 0.826011 | 3.428438e-54 | -8.615850e-47 |
| Msa0082050 | Msa0813260 | 0.809258 | 2.068370e-50 | -8.615850e-47 |
| Msa0082050 | Msa0844610 | 0.823047 | 1.708728e-53 | -8.615850e-47 |
| Msa0082050 | Msa0865970 | 0.836016 | 1.197540e-56 | -8.615850e-47 |
| Msa0082050 | Msa0866070 | 0.835856 | 1.314792e-56 | -8.615850e-47 |
| Msa0082050 | Msa0907850 | 0.826205 | 3.082328e-54 | -8.615850e-47 |
| Msa0082050 | Msa0968050 | 0.800026 | 1.748013e-48 | -8.615850e-47 |
| Msa0082050 | Msa1030030 | 0.810179 | 1.310708e-50 | -8.615850e-47 |
| Msa0082050 | Msa1034700 | 0.838497 | 2.776727e-57 | -8.615850e-47 |
| Msa0082050 | Msa1042660 | 0.808431 | 3.108418e-50 | -8.615850e-47 |
| Msa0082050 | Msa1063370 | 0.808592 | 2.871270e-50 | -8.615850e-47 |
| Msa0082050 | Msa1074110 | 0.833789 | 4.358098e-56 | -8.615850e-47 |
| Msa0082050 | Msa1074350 | 0.808620 | 2.831889e-50 | -8.615850e-47 |
| Msa0082050 | Msa1074540 | 0.826304 | 2.920422e-54 | -8.615850e-47 |
| Msa0082050 | Msa1108720 | 0.818760 | 1.656666e-52 | -8.615850e-47 |
| Msa0082050 | Msa1114620 | 0.803034 | 4.226462e-49 | -8.615850e-47 |
| Msa0082050 | Msa1127430 | 0.834867 | 2.337757e-56 | -8.615850e-47 |
| Msa0082050 | Msa1131090 | 0.818487 | 1.910957e-52 | -8.615850e-47 |
| Msa0082050 | Msa1152410 | 0.805890 | 1.072900e-49 | -8.615850e-47 |
| Msa0082050 | Msa1156820 | 0.816285 | 5.983013e-52 | -8.615850e-47 |
| Msa0082050 | Msa1165490 | 0.813161 | 2.943948e-51 | -8.615850e-47 |
| Msa0082050 | Msa1184780 | 0.837879 | 4.004692e-57 | -8.615850e-47 |
| Msa0082050 | Msa1201640 | 0.804746 | 1.863061e-49 | -8.615850e-47 |
| Msa0082050 | Msa1206650 | 0.832231 | 1.063990e-55 | -8.615850e-47 |
| Msa0082050 | Msa1209190 | 0.839539 | 1.491493e-57 | -8.615850e-47 |
| Msa0082050 | Msa1209860 | 0.812067 | 5.109419e-51 | -8.615850e-47 |
| Msa0082050 | Msa1234620 | 0.815841 | 7.517438e-52 | -8.615850e-47 |
| Msa0082050 | Msa1254620 | 0.827310 | 1.679143e-54 | -8.615850e-47 |
| Msa0082050 | Msa1257070 | 0.810704 | 1.009548e-50 | -8.615850e-47 |
| Msa0082050 | Msa1260680 | 0.811687 | 6.181021e-51 | -8.615850e-47 |
| Msa0082050 | Msa1266330 | 0.804951 | 1.688364e-49 | -8.615850e-47 |
| Msa0082050 | Msa1270660 | 0.803406 | 3.540003e-49 | -8.615850e-47 |
| Msa0082050 | Msa1274510 | 0.809549 | 1.791541e-50 | -8.615850e-47 |
| Msa0082050 | Msa1280170 | 0.821630 | 3.645235e-53 | -8.615850e-47 |
| Msa0082050 | Msa1285200 | 0.800634 | 1.314456e-48 | -8.615850e-47 |
| Msa0082050 | Msa1298100 | 0.865333 | 6.372944e-65 | -8.615850e-47 |
| Msa0082050 | Msa1304810 | 0.807025 | 6.182772e-50 | -8.615850e-47 |
| Msa0082050 | Msa1330550 | 0.804647 | 1.954327e-49 | -8.615850e-47 |
| Msa0082050 | Msa1336040 | 0.823514 | 1.329693e-53 | -8.615850e-47 |
| Msa0082050 | Msa1366550 | 0.833381 | 5.510307e-56 | -8.615850e-47 |
| Msa0082050 | Msa1370590 | 0.806172 | 9.360269e-50 | -8.615850e-47 |
| Msa0082050 | Msa1384100 | 0.807163 | 5.780822e-50 | -8.615850e-47 |
| Msa0082050 | Msa1399260 | 0.801481 | 8.823664e-49 | -8.615850e-47 |
| Msa0082050 | Msa1411980 | 0.808494 | 3.012778e-50 | -8.615850e-47 |
| Msa0082050 | Msa1421900 | 0.850174 | 2.014312e-60 | -8.615850e-47 |
| Msa0082050 | Msa1434040 | 0.817674 | 2.917906e-52 | -8.615850e-47 |
| Msa0082050 | Msa1444120 | 0.813498 | 2.483021e-51 | -8.615850e-47 |
| Msa0082050 | Msa1450720 | 0.807528 | 4.836811e-50 | -8.615850e-47 |
| Msa0082050 | Msa1463030 | 0.833370 | 5.544276e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082050 | MtrunA17_Chr1g0194901 | 96.434 | 701 | 20 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1393 |
| Msa0082050 | MtrunA17_Chr7g0269851 | 60.347 | 691 | 188 | 13 | 30 | 683 | 39 | 680 | 0.0 | 756 |
| Msa0082050 | MtrunA17_Chr7g0275571 | 45.796 | 559 | 263 | 10 | 93 | 624 | 122 | 667 | 2.22e-150 | 453 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082050 | AT1G02660.1 | 57.280 | 728 | 266 | 13 | 1 | 698 | 1 | 713 | 0.0 | 747 |
| Msa0082050 | AT3G62590.1 | 50.980 | 714 | 254 | 15 | 1 | 695 | 1 | 637 | 0.0 | 607 |
| Msa0082050 | AT3G61680.2 | 47.664 | 535 | 240 | 6 | 95 | 620 | 122 | 625 | 1.69e-150 | 452 |
| Msa0082050 | AT3G61680.1 | 47.664 | 535 | 240 | 6 | 95 | 620 | 122 | 625 | 1.69e-150 | 452 |
| Msa0082050 | AT3G61680.3 | 47.664 | 535 | 240 | 6 | 95 | 620 | 122 | 625 | 1.69e-150 | 452 |
Find 167 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAATTACCTTGATATT+TGG | 0.154361 | 1_2:+60846477 | None:intergenic |
| AGAAACCCTCCTTAGCATTT+TGG | 0.155210 | 1_2:+60846560 | None:intergenic |
| ATCCTATATCCACCATTATT+TGG | 0.160237 | 1_2:+60845573 | None:intergenic |
| GAGAGATGAATGAATATTTA+AGG | 0.164324 | 1_2:+60847254 | None:intergenic |
| GCAATTACCTCAAATTTAAT+TGG | 0.213954 | 1_2:+60845086 | None:intergenic |
| CCCTGCTAGGATGTTAATAT+TGG | 0.229996 | 1_2:-60843856 | Msa0082050:CDS |
| TACGGATCTGGTTAAGTTCT+TGG | 0.252856 | 1_2:+60844096 | None:intergenic |
| GTCTCTCGACGACGCCGTTT+TGG | 0.268578 | 1_2:-60846835 | Msa0082050:CDS |
| AATGCTAAGGAGGGTTTCTT+TGG | 0.270200 | 1_2:-60846556 | Msa0082050:CDS |
| GATGTCACACTTGGGGAGTT+TGG | 0.270494 | 1_2:-60846511 | Msa0082050:CDS |
| CCTGCTAGGATGTTAATATT+GGG | 0.281713 | 1_2:-60843855 | Msa0082050:CDS |
| CTACTTCCTGTGATAACATT+TGG | 0.282356 | 1_2:-60844744 | Msa0082050:CDS |
| TGCCTTGCGGCAGAAGATTA+TGG | 0.283373 | 1_2:+60844318 | None:intergenic |
| AGGAGGGGCAGAGAGAGAAT+TGG | 0.296623 | 1_2:-60846767 | Msa0082050:CDS |
| CAGGAAGAGAGTCCTTAAAA+AGG | 0.312198 | 1_2:-60843932 | Msa0082050:CDS |
| TCCACCATTATTTGGCTCCT+TGG | 0.317715 | 1_2:+60845581 | None:intergenic |
| TTTAGGTGAGCATGAACTTC+TGG | 0.322356 | 1_2:+60844879 | None:intergenic |
| TTAAGTGACCGATCTGCTTA+TGG | 0.329267 | 1_2:-60844188 | Msa0082050:CDS |
| CATTTCATATCATTCATCTA+AGG | 0.331288 | 1_2:+60843814 | None:intergenic |
| CTTGGTGAAAATTTCTCATC+TGG | 0.344080 | 1_2:+60844341 | None:intergenic |
| CTTGATATTTGGTATAGAAT+AGG | 0.352328 | 1_2:+60846488 | None:intergenic |
| GATACCCATTGGAATCTCTA+TGG | 0.358600 | 1_2:-60846890 | Msa0082050:CDS |
| GGAGGGGCAGAGAGAGAATT+GGG | 0.360798 | 1_2:-60846766 | Msa0082050:CDS |
| CATGTCATGATCTCTTTGTA+TGG | 0.368198 | 1_2:+60844154 | None:intergenic |
| AGCTTCTTGTCCGTGTCATT+AGG | 0.369839 | 1_2:+60844260 | None:intergenic |
| CTCGCATCGATTTACGGATC+TGG | 0.403958 | 1_2:+60844084 | None:intergenic |
| CGCAGAAGTGGCATCTTTGA+TGG | 0.405975 | 1_2:-60845415 | Msa0082050:CDS |
| CGTGCAACTTTCCGTTTCAC+TGG | 0.411226 | 1_2:-60844843 | Msa0082050:CDS |
| CGTTTCACTGGACATTCCCT+TGG | 0.413018 | 1_2:-60844831 | Msa0082050:CDS |
| CAACGCCAGTCACCGTTCTC+TGG | 0.414357 | 1_2:-60843966 | Msa0082050:CDS |
| GACCGATCTGCTTATGGATC+TGG | 0.419315 | 1_2:-60844182 | Msa0082050:CDS |
| AGAGATGAATGAATATTTAA+GGG | 0.430756 | 1_2:+60847255 | None:intergenic |
| CCCAATATTAACATCCTAGC+AGG | 0.442858 | 1_2:+60843855 | None:intergenic |
| TGAATGAATATTTAAGGGTA+TGG | 0.446357 | 1_2:+60847260 | None:intergenic |
| TTGATACCAGCATTGTTGTT+GGG | 0.446372 | 1_2:-60844016 | Msa0082050:CDS |
| TTCACGACCCACCGCACTTA+CGG | 0.447728 | 1_2:+60846953 | None:intergenic |
| ACATTCCCTTGGTGGAAGCT+TGG | 0.448070 | 1_2:-60844820 | Msa0082050:CDS |
| GACAGCAGTGGTTGCGGCAA+AGG | 0.448188 | 1_2:-60845376 | Msa0082050:CDS |
| ATTGTTCCTTCGATCTCCAT+TGG | 0.450078 | 1_2:-60847017 | Msa0082050:CDS |
| TTCACTGGACATTCCCTTGG+TGG | 0.452430 | 1_2:-60844828 | Msa0082050:CDS |
| GAAACCAAGGAGCCAAATAA+TGG | 0.453919 | 1_2:-60845585 | Msa0082050:CDS |
| GGGAAACTCTTAAAACATTA+CGG | 0.455788 | 1_2:-60845702 | Msa0082050:CDS |
| GTTCGGAGTCATTAGCATCT+TGG | 0.455806 | 1_2:-60845130 | Msa0082050:CDS |
| GTTCAAGAACGTCAACTTTG+CGG | 0.456069 | 1_2:+60844232 | None:intergenic |
| CCTGCACGTGGCTTCGCGGC+AGG | 0.457427 | 1_2:+60844673 | None:intergenic |
| CACATGGTTAGCTGAATGTT+AGG | 0.465272 | 1_2:-60843744 | Msa0082050:three_prime_UTR |
| TTCTCTGTTATCTTCCAAAA+CGG | 0.471419 | 1_2:+60846821 | None:intergenic |
| AAGAATATTCCTCTACAAGC+AGG | 0.475927 | 1_2:+60843672 | None:intergenic |
| GTTCCTTCGATCTCCATTGG+TGG | 0.483103 | 1_2:-60847014 | Msa0082050:CDS |
| ACACAAATAAATGCATGTGT+TGG | 0.484143 | 1_2:+60843889 | None:intergenic |
| CGCATCTACCGTAAGTGCGG+TGG | 0.485121 | 1_2:-60846961 | Msa0082050:CDS |
| TGTTGGGAGGTCCATGGTAT+CGG | 0.485167 | 1_2:-60844000 | Msa0082050:CDS |
| AAGGGTATGGAACCTAAAAC+AGG | 0.491510 | 1_2:+60847273 | None:intergenic |
| ACTTCTTCAAATGCAGCGGC+TGG | 0.497103 | 1_2:-60845471 | Msa0082050:CDS |
| AGCCAAATAATGGTGGATAT+AGG | 0.497389 | 1_2:-60845575 | Msa0082050:CDS |
| CTTAATATCTCAAGTGGATG+AGG | 0.501462 | 1_2:+60844206 | None:intergenic |
| GTTGATACCAGCATTGTTGT+TGG | 0.504284 | 1_2:-60844017 | Msa0082050:CDS |
| ATTGCCTGCACGTGGCTTCG+CGG | 0.504752 | 1_2:+60844669 | None:intergenic |
| CCTGCCGCGAAGCCACGTGC+AGG | 0.508181 | 1_2:-60844673 | Msa0082050:CDS |
| GTATATATGAGGCTGCTAAA+GGG | 0.510063 | 1_2:-60844920 | Msa0082050:CDS |
| CACAAATAAATGCATGTGTT+GGG | 0.510490 | 1_2:+60843890 | None:intergenic |
| TTCAGTGACAGCAGTGGTTG+CGG | 0.512338 | 1_2:-60845382 | Msa0082050:CDS |
| CTCGTTCGTCACCTTGCGAA+TGG | 0.517823 | 1_2:-60845314 | Msa0082050:CDS |
| GGTATATATGAGGCTGCTAA+AGG | 0.517913 | 1_2:-60844921 | Msa0082050:CDS |
| CATTGTTGTTGGGAGGTCCA+TGG | 0.518484 | 1_2:-60844006 | Msa0082050:CDS |
| CAAGGGAATGTCCAGTGAAA+CGG | 0.522758 | 1_2:+60844832 | None:intergenic |
| CTATTCTATACCAAATATCA+AGG | 0.525327 | 1_2:-60846487 | Msa0082050:intron |
| AATGTTTGGAAAGGGGAACA+AGG | 0.528089 | 1_2:-60846720 | Msa0082050:CDS |
| AAAATCTGAGAAAATTCCTC+AGG | 0.530787 | 1_2:-60845634 | Msa0082050:CDS |
| AATCTTCTGCCGCAAGGCAG+TGG | 0.532114 | 1_2:-60844314 | Msa0082050:CDS |
| AAGCTACTATACACACCAAT+GGG | 0.534284 | 1_2:-60844383 | Msa0082050:CDS |
| CTCCTCACCGTCATCTCTAA+CGG | 0.535095 | 1_2:+60846785 | None:intergenic |
| CATATATACCTCTGTGCACA+AGG | 0.536219 | 1_2:+60844934 | None:intergenic |
| TTATGCCAGAGAACGGTGAC+TGG | 0.536435 | 1_2:+60843961 | None:intergenic |
| TCAAATGCAGCGGCTGGTGA+AGG | 0.538184 | 1_2:-60845465 | Msa0082050:CDS |
| CTTCTGCGTTCATCATGTCA+AGG | 0.540763 | 1_2:+60845430 | None:intergenic |
| TTCTCTGGCATAATGAAGAC+AGG | 0.544083 | 1_2:-60843951 | Msa0082050:CDS |
| AGAACGTCAACTTTGCGGCT+CGG | 0.546820 | 1_2:+60844237 | None:intergenic |
| AGAATCAGCAATTCACCCAT+TGG | 0.548209 | 1_2:+60844368 | None:intergenic |
| CTGCTAGGATGTTAATATTG+GGG | 0.549191 | 1_2:-60843854 | Msa0082050:CDS |
| GGTTCCCCTTCCATCATGTG+TGG | 0.551578 | 1_2:-60844723 | Msa0082050:CDS |
| CGCCTCCACACATGATGGAA+GGG | 0.552230 | 1_2:+60844718 | None:intergenic |
| ATGTGAAGAATGTTTGGAAA+GGG | 0.553617 | 1_2:-60846728 | Msa0082050:CDS |
| TGCGGCAGAAGATTATGGCT+TGG | 0.555573 | 1_2:+60844323 | None:intergenic |
| CGGTCACTTAATATCTCAAG+TGG | 0.555750 | 1_2:+60844200 | None:intergenic |
| CTCACCGTCATCTCTAACGG+TGG | 0.557455 | 1_2:+60846788 | None:intergenic |
| AGCAGTGGTTGCGGCAAAGG+AGG | 0.558429 | 1_2:-60845373 | Msa0082050:CDS |
| GGCAAAGGAGGAAGTAAAGC+AGG | 0.560431 | 1_2:-60845361 | Msa0082050:CDS |
| GGACCTCCCAACAACAATGC+TGG | 0.562296 | 1_2:+60844010 | None:intergenic |
| GCTGCATTTGAAGAAGTGAA+TGG | 0.563038 | 1_2:+60845477 | None:intergenic |
| CATGTGAAGAATGTTTGGAA+AGG | 0.563671 | 1_2:-60846729 | Msa0082050:CDS |
| GTTAGAGATGACGGTGAGGA+GGG | 0.565035 | 1_2:-60846783 | Msa0082050:CDS |
| ATACCAGCATTGTTGTTGGG+AGG | 0.566961 | 1_2:-60844013 | Msa0082050:CDS |
| GTATGCTCAGATGTCACACT+TGG | 0.567630 | 1_2:-60846520 | Msa0082050:CDS |
| CAGAGAACGGTGACTGGCGT+TGG | 0.568268 | 1_2:+60843967 | None:intergenic |
| TGACATGATGAACGCAGAAG+TGG | 0.568983 | 1_2:-60845427 | Msa0082050:CDS |
| CTCAAGAACCCTGCTTGTAG+AGG | 0.569073 | 1_2:-60843681 | Msa0082050:three_prime_UTR |
| CGATCTGCTTATGGATCTGG+AGG | 0.572142 | 1_2:-60844179 | Msa0082050:CDS |
| TTTACTTGGTTATTGAGACA+TGG | 0.572898 | 1_2:+60844546 | None:intergenic |
| TTACTTGGTTATTGAGACAT+GGG | 0.574179 | 1_2:+60844547 | None:intergenic |
| TCTTTACTTTCGACTTCCTG+AGG | 0.574252 | 1_2:+60845618 | None:intergenic |
| CAAGGGAATCATGAAAGAGA+AGG | 0.574584 | 1_2:-60846702 | Msa0082050:CDS |
| CGACGGAACAGAACGTTCAG+TGG | 0.580188 | 1_2:-60846861 | Msa0082050:CDS |
| AGAGAAGCAAGAAGAAACCA+AGG | 0.581266 | 1_2:-60845598 | Msa0082050:CDS |
| TCGCCTCCACACATGATGGA+AGG | 0.582366 | 1_2:+60844717 | None:intergenic |
| TCCATGGTATCGGTCAGTAT+CGG | 0.583827 | 1_2:-60843990 | Msa0082050:CDS |
| GGGGAACCAAATGTTATCAC+AGG | 0.584190 | 1_2:+60844738 | None:intergenic |
| CGTTAGAGATGACGGTGAGG+AGG | 0.587487 | 1_2:-60846784 | Msa0082050:CDS |
| GCCGATACTGACCGATACCA+TGG | 0.588719 | 1_2:+60843989 | None:intergenic |
| GAGAGAAAAGACGCAAGGTA+TGG | 0.588772 | 1_2:-60844064 | Msa0082050:CDS |
| GTGTATAAAACAAGGGCACA+TGG | 0.588841 | 1_2:-60843760 | Msa0082050:three_prime_UTR |
| GCATTATAATTGCCTGCACG+TGG | 0.590797 | 1_2:+60844661 | None:intergenic |
| GAAGCTACTATACACACCAA+TGG | 0.592530 | 1_2:-60844384 | Msa0082050:CDS |
| TAGTGCCAAGCTTCCACCAA+GGG | 0.594028 | 1_2:+60844815 | None:intergenic |
| TGTGCACAGAGGTATATATG+AGG | 0.594337 | 1_2:-60844931 | Msa0082050:CDS |
| GACACTCTACTTGAAAAGCT+TGG | 0.594758 | 1_2:-60844696 | Msa0082050:CDS |
| CTCCAGATCCATAAGCAGAT+CGG | 0.594796 | 1_2:+60844180 | None:intergenic |
| AGCCATAATCTTCTGCCGCA+AGG | 0.595034 | 1_2:-60844320 | Msa0082050:CDS |
| AACGTTCTGTTCCGTCGTTG+TGG | 0.595293 | 1_2:+60846867 | None:intergenic |
| ATGTTTGGAAAGGGGAACAA+GGG | 0.596462 | 1_2:-60846719 | Msa0082050:CDS |
| TATGCTCAGATGTCACACTT+GGG | 0.597591 | 1_2:-60846519 | Msa0082050:CDS |
| ACAGGAAGTAGAGAGGTGAT+TGG | 0.597627 | 1_2:+60844756 | None:intergenic |
| AGTGTCGCCTCCACACATGA+TGG | 0.598823 | 1_2:+60844713 | None:intergenic |
| AGAAAAGACGCAAGGTATGG+TGG | 0.599163 | 1_2:-60844061 | Msa0082050:CDS |
| GCCTCCACACATGATGGAAG+GGG | 0.599219 | 1_2:+60844719 | None:intergenic |
| GTGGCCATAGAGATTCCAAT+GGG | 0.600305 | 1_2:+60846886 | None:intergenic |
| TCCCCTTCCATCATGTGTGG+AGG | 0.601542 | 1_2:-60844720 | Msa0082050:CDS |
| GTCTTCATTATGCCAGAGAA+CGG | 0.604223 | 1_2:+60843954 | None:intergenic |
| CGCACTTACGGTAGATGCGG+TGG | 0.605825 | 1_2:+60846965 | None:intergenic |
| TGCTAGGATGTTAATATTGG+GGG | 0.605936 | 1_2:-60843853 | Msa0082050:CDS |
| ACCAAGGAGCCAAATAATGG+TGG | 0.606415 | 1_2:-60845582 | Msa0082050:CDS |
| ATTCACTTCTTCAAATGCAG+CGG | 0.610395 | 1_2:-60845475 | Msa0082050:CDS |
| GCATCTACCGTAAGTGCGGT+GGG | 0.614606 | 1_2:-60846960 | Msa0082050:CDS |
| GTGCAGATAAGATGCAGCAG+AGG | 0.621656 | 1_2:+60845521 | None:intergenic |
| AAAACCACCGTTAGAGATGA+CGG | 0.627979 | 1_2:-60846792 | Msa0082050:CDS |
| GATCCACCAATGGAGATCGA+AGG | 0.628096 | 1_2:+60847011 | None:intergenic |
| TTAGAGATGACGGTGAGGAG+GGG | 0.629402 | 1_2:-60846782 | Msa0082050:CDS |
| ACTCGTCGCGGTAGTACAAG+AGG | 0.630459 | 1_2:+60844038 | None:intergenic |
| AATCTCTATGGCCACAACGA+CGG | 0.633455 | 1_2:-60846878 | Msa0082050:CDS |
| TGTGGCCATAGAGATTCCAA+TGG | 0.646166 | 1_2:+60846885 | None:intergenic |
| AGGGAAAAGTGTATAAAACA+AGG | 0.646888 | 1_2:-60843768 | Msa0082050:three_prime_UTR |
| TCGCAGATGAACCATTCGCA+AGG | 0.648265 | 1_2:+60845303 | None:intergenic |
| CACCGCATCTACCGTAAGTG+CGG | 0.649836 | 1_2:-60846964 | Msa0082050:CDS |
| TGTATCTAAAGATCCACCAA+TGG | 0.652056 | 1_2:+60847001 | None:intergenic |
| ATGCTCAGATGTCACACTTG+GGG | 0.652908 | 1_2:-60846518 | Msa0082050:CDS |
| AGAATATTCCTCTACAAGCA+GGG | 0.654837 | 1_2:+60843673 | None:intergenic |
| TGGATATAGGATAAGTGCAA+CGG | 0.659737 | 1_2:-60845562 | Msa0082050:CDS |
| CACCGCACTTACGGTAGATG+CGG | 0.662356 | 1_2:+60846962 | None:intergenic |
| TTGGATGTCCTTGTGCACAG+AGG | 0.663273 | 1_2:-60844942 | Msa0082050:CDS |
| AGATATAGACCACTGCCTTG+CGG | 0.663361 | 1_2:+60844305 | None:intergenic |
| CCAATATTAACATCCTAGCA+GGG | 0.667471 | 1_2:+60843856 | None:intergenic |
| GTGTCATTAGGTTCTGACAA+AGG | 0.671563 | 1_2:+60844272 | None:intergenic |
| CATGCTCACCTAAAATCTCG+AGG | 0.672833 | 1_2:-60844870 | Msa0082050:CDS |
| TACTGATTCAGTGACAGCAG+TGG | 0.675088 | 1_2:-60845388 | Msa0082050:CDS |
| GATGCGAGAGAAAAGACGCA+AGG | 0.678863 | 1_2:-60844069 | Msa0082050:CDS |
| TGTTATCACAGGAAGTAGAG+AGG | 0.682469 | 1_2:+60844749 | None:intergenic |
| TTTGTCAGAACCTAATGACA+CGG | 0.688799 | 1_2:-60844270 | Msa0082050:CDS |
| GGGAAAAGTGTATAAAACAA+GGG | 0.692115 | 1_2:-60843767 | Msa0082050:three_prime_UTR |
| TGTGAAGAATGTTTGGAAAG+GGG | 0.703391 | 1_2:-60846727 | Msa0082050:CDS |
| ATGTTGTTGTTACGTTACGC+AGG | 0.703792 | 1_2:+60847152 | None:intergenic |
| CACCGTTAGAGATGACGGTG+AGG | 0.714990 | 1_2:-60846787 | Msa0082050:CDS |
| GTAGTGCCAAGCTTCCACCA+AGG | 0.715098 | 1_2:+60844814 | None:intergenic |
| TCAAGTTTGTGATACTTGCG+CGG | 0.721242 | 1_2:-60846640 | Msa0082050:CDS |
| ATCTGCGATGATAACCAGAG+TGG | 0.733794 | 1_2:-60845288 | Msa0082050:CDS |
| TAATTGCAAGAAAATGCTCG+CGG | 0.749108 | 1_2:+60844624 | None:intergenic |
| ATGCTGGTATCAACTCGTCG+CGG | 0.755961 | 1_2:+60844026 | None:intergenic |
| GCTGAGAATGATGAAAACAA+CGG | 0.787436 | 1_2:-60846672 | Msa0082050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTCTTTTCTTTGTTTT+CGG | + | chr1_2:60843847-60843866 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTTTGGATCATT+CGG | - | chr1_2:60844506-60844525 | Msa0082050:intron | 15.0% |
| !! | TAAAATTAAAAGACAAACTT+TGG | + | chr1_2:60844721-60844740 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACATAAACTTTT+TGG | + | chr1_2:60846415-60846434 | None:intergenic | 15.0% |
| !!! | TATGTTTTTTCTTTATTGAT+AGG | - | chr1_2:60846422-60846441 | Msa0082050:intron | 15.0% |
| !!! | ATTCATATTTTTTATTACGA+GGG | - | chr1_2:60847125-60847144 | Msa0082050:five_prime_UTR | 15.0% |
| !! | AGAGATGAATGAATATTTAA+GGG | + | chr1_2:60843664-60843683 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGTTTTGATTTGA+TGG | + | chr1_2:60843739-60843758 | None:intergenic | 20.0% |
| !! | AAACTATGTGTTTAAAAACT+GGG | - | chr1_2:60843876-60843895 | Msa0082050:CDS | 20.0% |
| !! | AAACAAATTACCTTGATATT+TGG | + | chr1_2:60844442-60844461 | None:intergenic | 20.0% |
| !!! | GCTTTATGGTTTTTAAATTT+TGG | - | chr1_2:60844497-60844516 | Msa0082050:intron | 20.0% |
| !!! | TATTTTGTTTTTATGTGATC+TGG | - | chr1_2:60844612-60844631 | Msa0082050:CDS | 20.0% |
| !!! | TTTGTCTTTTAATTTTAGCA+TGG | - | chr1_2:60844724-60844743 | Msa0082050:CDS | 20.0% |
| !!! | TACAAGATTTTTTGTTATTC+AGG | - | chr1_2:60845651-60845670 | Msa0082050:CDS | 20.0% |
| !!! | GATTCATATTTTTTATTACG+AGG | - | chr1_2:60847124-60847143 | Msa0082050:five_prime_UTR | 20.0% |
| ! | TGAATGAATATTTAAGGGTA+TGG | + | chr1_2:60843659-60843678 | None:intergenic | 25.0% |
| ! | GAGAGATGAATGAATATTTA+AGG | + | chr1_2:60843665-60843684 | None:intergenic | 25.0% |
| !! | AAGAAAAGAAAAAAGCACAA+TGG | - | chr1_2:60843853-60843872 | Msa0082050:CDS | 25.0% |
| ! | GAAACTATGTGTTTAAAAAC+TGG | - | chr1_2:60843875-60843894 | Msa0082050:CDS | 25.0% |
| !! | GAAAACAATGATTTTTGTGA+AGG | + | chr1_2:60843992-60844011 | None:intergenic | 25.0% |
| !! | ATTTTCATTTAGATACCCAT+TGG | - | chr1_2:60844015-60844034 | Msa0082050:CDS | 25.0% |
| ! | CTTGATATTTGGTATAGAAT+AGG | + | chr1_2:60844431-60844450 | None:intergenic | 25.0% |
| ! | CTATTCTATACCAAATATCA+AGG | - | chr1_2:60844429-60844448 | Msa0082050:intron | 25.0% |
| !!! | TTGTTTTTACTTGTGCTTTA+TGG | - | chr1_2:60844483-60844502 | Msa0082050:intron | 25.0% |
| !!! | TTTTAGTTGATTCTTAGAGA+TGG | - | chr1_2:60844545-60844564 | Msa0082050:intron | 25.0% |
| ! | GTTTGTAAATTGTTCATTCA+TGG | - | chr1_2:60844571-60844590 | Msa0082050:CDS | 25.0% |
| ! | ATCTTCAACTAATCAATGTT+TGG | + | chr1_2:60844648-60844667 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAACAAATCA+AGG | + | chr1_2:60844672-60844691 | None:intergenic | 25.0% |
| !!! | TGATTTGTTTCTTTCTTTCT+TGG | - | chr1_2:60844672-60844691 | Msa0082050:CDS | 25.0% |
| !!! | TATGGATTGGTGTATTTATA+AGG | - | chr1_2:60844835-60844854 | Msa0082050:CDS | 25.0% |
| !! | CTATAATCTGAATCTTTTGT+TGG | - | chr1_2:60844912-60844931 | Msa0082050:CDS | 25.0% |
| !!! | AGTGTGATTTTTTACAACTA+TGG | - | chr1_2:60845016-60845035 | Msa0082050:intron | 25.0% |
| ! | TGGAAATCAGAACATATAAT+AGG | + | chr1_2:60845144-60845163 | None:intergenic | 25.0% |
| !! | TTAGTTTCATATGCATTTTG+TGG | + | chr1_2:60845164-60845183 | None:intergenic | 25.0% |
| ! | TGAAATTTGATTATTTAGCC+AGG | - | chr1_2:60845193-60845212 | Msa0082050:intron | 25.0% |
| ! | GAAATTTGATTATTTAGCCA+GGG | - | chr1_2:60845194-60845213 | Msa0082050:intron | 25.0% |
| !!! | AGATTTTTTGTTATTCAGGT+AGG | - | chr1_2:60845655-60845674 | Msa0082050:CDS | 25.0% |
| !!! | GATTTTTTGTTATTCAGGTA+GGG | - | chr1_2:60845656-60845675 | Msa0082050:CDS | 25.0% |
| !!! | ATTTTTTGTTATTCAGGTAG+GGG | - | chr1_2:60845657-60845676 | Msa0082050:CDS | 25.0% |
| !! | TTGATAAAGCGTTATTATGT+AGG | - | chr1_2:60845763-60845782 | Msa0082050:intron | 25.0% |
| !! | TGATAAAGCGTTATTATGTA+GGG | - | chr1_2:60845764-60845783 | Msa0082050:intron | 25.0% |
| !! | ATTTAATTGGCTCAAAAAGT+AGG | + | chr1_2:60845820-60845839 | None:intergenic | 25.0% |
| !! | TTTTGAGCCAATTAAATTTG+AGG | - | chr1_2:60845823-60845842 | Msa0082050:intron | 25.0% |
| ! | GCAATTACCTCAAATTTAAT+TGG | + | chr1_2:60845833-60845852 | None:intergenic | 25.0% |
| ! | CATTTCATATCATTCATCTA+AGG | + | chr1_2:60847105-60847124 | None:intergenic | 25.0% |
| !!! | ATATTTTTTATTACGAGGGA+GGG | - | chr1_2:60847129-60847148 | Msa0082050:five_prime_UTR | 25.0% |
| ! | AAAATTCGTTCACCTGTTTT+AGG | - | chr1_2:60843631-60843650 | Msa0082050:three_prime_UTR | 30.0% |
| TTCTCTGTTATCTTCCAAAA+CGG | + | chr1_2:60844098-60844117 | None:intergenic | 30.0% | |
| ! | TTTTGCATGTGAAGAATGTT+TGG | - | chr1_2:60844182-60844201 | Msa0082050:CDS | 30.0% |
| ATGTGAAGAATGTTTGGAAA+GGG | - | chr1_2:60844188-60844207 | Msa0082050:CDS | 30.0% | |
| ! | ACTCATTTTCCAAAATGCTA+AGG | - | chr1_2:60844347-60844366 | Msa0082050:CDS | 30.0% |
| ! | ATTTTCCAAAATGCTAAGGA+GGG | - | chr1_2:60844351-60844370 | Msa0082050:CDS | 30.0% |
| ! | TTGTTCATTCATGGTTTTTG+AGG | - | chr1_2:60844580-60844599 | Msa0082050:CDS | 30.0% |
| ATTTACCATGTGTTGGATTA+TGG | - | chr1_2:60844817-60844836 | Msa0082050:CDS | 30.0% | |
| !!! | AAGGTTTTAATTCATAACCC+TGG | - | chr1_2:60844854-60844873 | Msa0082050:CDS | 30.0% |
| !!! | AGGTTTTAATTCATAACCCT+GGG | - | chr1_2:60844855-60844874 | Msa0082050:CDS | 30.0% |
| TATGTTAGGTGATTGATCTT+TGG | - | chr1_2:60845052-60845071 | Msa0082050:intron | 30.0% | |
| ! | GCATTTTTGCGATTGAAATT+TGG | - | chr1_2:60845089-60845108 | Msa0082050:intron | 30.0% |
| !!! | TAATGTTTTAAGAGTTTCCC+TGG | + | chr1_2:60845214-60845233 | None:intergenic | 30.0% |
| GGGAAACTCTTAAAACATTA+CGG | - | chr1_2:60845214-60845233 | Msa0082050:intron | 30.0% | |
| ATCGCTAGAGAAAAAAGAAT+TGG | - | chr1_2:60845255-60845274 | Msa0082050:intron | 30.0% | |
| AAAATCTGAGAAAATTCCTC+AGG | - | chr1_2:60845282-60845301 | Msa0082050:CDS | 30.0% | |
| ATCCTATATCCACCATTATT+TGG | + | chr1_2:60845346-60845365 | None:intergenic | 30.0% | |
| !!! | TGTACACATTTTTTTTACCC+AGG | - | chr1_2:60845949-60845968 | Msa0082050:intron | 30.0% |
| !!! | GTACACATTTTTTTTACCCA+GGG | - | chr1_2:60845950-60845969 | Msa0082050:intron | 30.0% |
| !!! | CCTTTAAGATTTTTGCAACA+TGG | + | chr1_2:60846324-60846343 | None:intergenic | 30.0% |
| CCATGTTGCAAAAATCTTAA+AGG | - | chr1_2:60846321-60846340 | Msa0082050:intron | 30.0% | |
| TTACTTGGTTATTGAGACAT+GGG | + | chr1_2:60846372-60846391 | None:intergenic | 30.0% | |
| TTTACTTGGTTATTGAGACA+TGG | + | chr1_2:60846373-60846392 | None:intergenic | 30.0% | |
| ! | CATAAACTTTTTGGATAAGC+AGG | + | chr1_2:60846406-60846425 | None:intergenic | 30.0% |
| CACAAATAAATGCATGTGTT+GGG | + | chr1_2:60847029-60847048 | None:intergenic | 30.0% | |
| ACACAAATAAATGCATGTGT+TGG | + | chr1_2:60847030-60847049 | None:intergenic | 30.0% | |
| !!! | CATATTTTTTATTACGAGGG+AGG | - | chr1_2:60847128-60847147 | Msa0082050:five_prime_UTR | 30.0% |
| ! | AGGGAAAAGTGTATAAAACA+AGG | - | chr1_2:60847148-60847167 | Msa0082050:five_prime_UTR | 30.0% |
| ! | GGGAAAAGTGTATAAAACAA+GGG | - | chr1_2:60847149-60847168 | Msa0082050:five_prime_UTR | 30.0% |
| TGTATCTAAAGATCCACCAA+TGG | + | chr1_2:60843918-60843937 | None:intergenic | 35.0% | |
| CATGTGAAGAATGTTTGGAA+AGG | - | chr1_2:60844187-60844206 | Msa0082050:CDS | 35.0% | |
| TGTGAAGAATGTTTGGAAAG+GGG | - | chr1_2:60844189-60844208 | Msa0082050:CDS | 35.0% | |
| GCTGAGAATGATGAAAACAA+CGG | - | chr1_2:60844244-60844263 | Msa0082050:CDS | 35.0% | |
| ! | CATTTTCCAAAATGCTAAGG+AGG | - | chr1_2:60844350-60844369 | Msa0082050:CDS | 35.0% |
| ! | TCTTTCTTTCTTGGCTTGAA+TGG | - | chr1_2:60844681-60844700 | Msa0082050:CDS | 35.0% |
| ! | CTTTCTTTCTTGGCTTGAAT+GGG | - | chr1_2:60844682-60844701 | Msa0082050:CDS | 35.0% |
| ! | TTTCTTTCTTGGCTTGAATG+GGG | - | chr1_2:60844683-60844702 | Msa0082050:CDS | 35.0% |
| ! | GCATTTTGCCGTTATATCAA+AGG | - | chr1_2:60844780-60844799 | Msa0082050:CDS | 35.0% |
| ACCGCAAACCTTTGATATAA+CGG | + | chr1_2:60844791-60844810 | None:intergenic | 35.0% | |
| TTTAATTCATAACCCTGGGT+AGG | - | chr1_2:60844859-60844878 | Msa0082050:CDS | 35.0% | |
| TTAATTCATAACCCTGGGTA+GGG | - | chr1_2:60844860-60844879 | Msa0082050:CDS | 35.0% | |
| CTTAAACTTGTCGAGACAAT+GGG | - | chr1_2:60844888-60844907 | Msa0082050:CDS | 35.0% | |
| TTAAACTTGTCGAGACAATG+GGG | - | chr1_2:60844889-60844908 | Msa0082050:CDS | 35.0% | |
| ! | GTTTTATCCAAAGCTAAACG+AGG | + | chr1_2:60844976-60844995 | None:intergenic | 35.0% |
| GAATGCTCATTGCTTATGTT+AGG | - | chr1_2:60845038-60845057 | Msa0082050:intron | 35.0% | |
| !! | AGCCAAATAATGGTGGATAT+AGG | - | chr1_2:60845341-60845360 | Msa0082050:CDS | 35.0% |
| TGGATATAGGATAAGTGCAA+CGG | - | chr1_2:60845354-60845373 | Msa0082050:CDS | 35.0% | |
| ATTCACTTCTTCAAATGCAG+CGG | - | chr1_2:60845441-60845460 | Msa0082050:CDS | 35.0% | |
| CAAAAAATCTTGTACCACTC+TGG | + | chr1_2:60845645-60845664 | None:intergenic | 35.0% | |
| AAGCGTTATTATGTAGGGTT+CGG | - | chr1_2:60845769-60845788 | Msa0082050:intron | 35.0% | |
| TTGCTGATATTGCAGACTAT+AGG | - | chr1_2:60845849-60845868 | Msa0082050:intron | 35.0% | |
| ! | TTTTTCGTCACTATTGTCGA+AGG | - | chr1_2:60845873-60845892 | Msa0082050:intron | 35.0% |
| ! | TTTTCGTCACTATTGTCGAA+GGG | - | chr1_2:60845874-60845893 | Msa0082050:intron | 35.0% |
| !!! | CATTTTTTTTACCCAGGGTT+TGG | - | chr1_2:60845955-60845974 | Msa0082050:intron | 35.0% |
| GTATATATGAGGCTGCTAAA+GGG | - | chr1_2:60845996-60846015 | Msa0082050:intron | 35.0% | |
| CTACTTCCTGTGATAACATT+TGG | - | chr1_2:60846172-60846191 | Msa0082050:intron | 35.0% | |
| TAATTGCAAGAAAATGCTCG+CGG | + | chr1_2:60846295-60846314 | None:intergenic | 35.0% | |
| ! | AGATTTTTGCAACATGGTCA+GGG | + | chr1_2:60846318-60846337 | None:intergenic | 35.0% |
| ! | AAGATTTTTGCAACATGGTC+AGG | + | chr1_2:60846319-60846338 | None:intergenic | 35.0% |
| AAGCTACTATACACACCAAT+GGG | - | chr1_2:60846533-60846552 | Msa0082050:CDS | 35.0% | |
| CTTGGTGAAAATTTCTCATC+TGG | + | chr1_2:60846578-60846597 | None:intergenic | 35.0% | |
| TTTGTCAGAACCTAATGACA+CGG | - | chr1_2:60846646-60846665 | Msa0082050:CDS | 35.0% | |
| CTTAATATCTCAAGTGGATG+AGG | + | chr1_2:60846713-60846732 | None:intergenic | 35.0% | |
| CATGTCATGATCTCTTTGTA+TGG | + | chr1_2:60846765-60846784 | None:intergenic | 35.0% | |
| !!! | TTTTCTCTCGCATCGATTTA+CGG | + | chr1_2:60846841-60846860 | None:intergenic | 35.0% |
| ! | TTGATACCAGCATTGTTGTT+GGG | - | chr1_2:60846900-60846919 | Msa0082050:CDS | 35.0% |
| AGTCCTTAAAAAGGTTTAGC+AGG | - | chr1_2:60846993-60847012 | Msa0082050:CDS | 35.0% | |
| ! | AAGCCTGCTAAACCTTTTTA+AGG | + | chr1_2:60846999-60847018 | None:intergenic | 35.0% |
| CCAATATTAACATCCTAGCA+GGG | + | chr1_2:60847063-60847082 | None:intergenic | 35.0% | |
| CCTGCTAGGATGTTAATATT+GGG | - | chr1_2:60847061-60847080 | Msa0082050:exon | 35.0% | |
| CTGCTAGGATGTTAATATTG+GGG | - | chr1_2:60847062-60847081 | Msa0082050:exon | 35.0% | |
| TGCTAGGATGTTAATATTGG+GGG | - | chr1_2:60847063-60847082 | Msa0082050:exon | 35.0% | |
| AGAATATTCCTCTACAAGCA+GGG | + | chr1_2:60847246-60847265 | None:intergenic | 35.0% | |
| AAGAATATTCCTCTACAAGC+AGG | + | chr1_2:60847247-60847266 | None:intergenic | 35.0% | |
| ! | AAGGGTATGGAACCTAAAAC+AGG | + | chr1_2:60843646-60843665 | None:intergenic | 40.0% |
| ! | ATGTTGTTGTTACGTTACGC+AGG | + | chr1_2:60843767-60843786 | None:intergenic | 40.0% |
| ATTGTTCCTTCGATCTCCAT+TGG | - | chr1_2:60843899-60843918 | Msa0082050:CDS | 40.0% | |
| GATACCCATTGGAATCTCTA+TGG | - | chr1_2:60844026-60844045 | Msa0082050:CDS | 40.0% | |
| AAAACCACCGTTAGAGATGA+CGG | - | chr1_2:60844124-60844143 | Msa0082050:CDS | 40.0% | |
| AATGTTTGGAAAGGGGAACA+AGG | - | chr1_2:60844196-60844215 | Msa0082050:CDS | 40.0% | |
| ATGTTTGGAAAGGGGAACAA+GGG | - | chr1_2:60844197-60844216 | Msa0082050:CDS | 40.0% | |
| CAAGGGAATCATGAAAGAGA+AGG | - | chr1_2:60844214-60844233 | Msa0082050:CDS | 40.0% | |
| TCAAGTTTGTGATACTTGCG+CGG | - | chr1_2:60844276-60844295 | Msa0082050:CDS | 40.0% | |
| ! | AGAAACCCTCCTTAGCATTT+TGG | + | chr1_2:60844359-60844378 | None:intergenic | 40.0% |
| AATGCTAAGGAGGGTTTCTT+TGG | - | chr1_2:60844360-60844379 | Msa0082050:CDS | 40.0% | |
| TATGCTCAGATGTCACACTT+GGG | - | chr1_2:60844397-60844416 | Msa0082050:intron | 40.0% | |
| GCCGTTATATCAAAGGTTTG+CGG | - | chr1_2:60844787-60844806 | Msa0082050:CDS | 40.0% | |
| TTGCGCAATTTACCATGTGT+TGG | - | chr1_2:60844810-60844829 | Msa0082050:CDS | 40.0% | |
| CCAATCCATAATCCAACACA+TGG | + | chr1_2:60844825-60844844 | None:intergenic | 40.0% | |
| CCATGTGTTGGATTATGGAT+TGG | - | chr1_2:60844822-60844841 | Msa0082050:CDS | 40.0% | |
| GCTTAAACTTGTCGAGACAA+TGG | - | chr1_2:60844887-60844906 | Msa0082050:CDS | 40.0% | |
| ! | TCTTAGTCCTCGTTTAGCTT+TGG | - | chr1_2:60844966-60844985 | Msa0082050:intron | 40.0% |
| TAGGTGATTGATCTTTGGCT+TGG | - | chr1_2:60845057-60845076 | Msa0082050:intron | 40.0% | |
| ! | AGGTGATTGATCTTTGGCTT+GGG | - | chr1_2:60845058-60845077 | Msa0082050:intron | 40.0% |
| !! | TTGATCTTTGGCTTGGGATT+CGG | - | chr1_2:60845064-60845083 | Msa0082050:intron | 40.0% |
| TCTTTACTTTCGACTTCCTG+AGG | + | chr1_2:60845301-60845320 | None:intergenic | 40.0% | |
| AGAGAAGCAAGAAGAAACCA+AGG | - | chr1_2:60845318-60845337 | Msa0082050:CDS | 40.0% | |
| GAAACCAAGGAGCCAAATAA+TGG | - | chr1_2:60845331-60845350 | Msa0082050:CDS | 40.0% | |
| GCTGCATTTGAAGAAGTGAA+TGG | + | chr1_2:60845442-60845461 | None:intergenic | 40.0% | |
| TTTCGTCACTATTGTCGAAG+GGG | - | chr1_2:60845875-60845894 | Msa0082050:intron | 40.0% | |
| CATATATACCTCTGTGCACA+AGG | + | chr1_2:60845985-60846004 | None:intergenic | 40.0% | |
| ! | TGTGCACAGAGGTATATATG+AGG | - | chr1_2:60845985-60846004 | Msa0082050:intron | 40.0% |
| GGTATATATGAGGCTGCTAA+AGG | - | chr1_2:60845995-60846014 | Msa0082050:intron | 40.0% | |
| TTTAGGTGAGCATGAACTTC+TGG | + | chr1_2:60846040-60846059 | None:intergenic | 40.0% | |
| TGTTATCACAGGAAGTAGAG+AGG | + | chr1_2:60846170-60846189 | None:intergenic | 40.0% | |
| GACACTCTACTTGAAAAGCT+TGG | - | chr1_2:60846220-60846239 | Msa0082050:intron | 40.0% | |
| ! | TTTTTGGATAAGCAGGAGTG+CGG | + | chr1_2:60846399-60846418 | None:intergenic | 40.0% |
| GAAGCTACTATACACACCAA+TGG | - | chr1_2:60846532-60846551 | Msa0082050:CDS | 40.0% | |
| AGAATCAGCAATTCACCCAT+TGG | + | chr1_2:60846551-60846570 | None:intergenic | 40.0% | |
| ! | GTGTCATTAGGTTCTGACAA+AGG | + | chr1_2:60846647-60846666 | None:intergenic | 40.0% |
| GTTCAAGAACGTCAACTTTG+CGG | + | chr1_2:60846687-60846706 | None:intergenic | 40.0% | |
| CGGTCACTTAATATCTCAAG+TGG | + | chr1_2:60846719-60846738 | None:intergenic | 40.0% | |
| TTAAGTGACCGATCTGCTTA+TGG | - | chr1_2:60846728-60846747 | Msa0082050:CDS | 40.0% | |
| TACGGATCTGGTTAAGTTCT+TGG | + | chr1_2:60846823-60846842 | None:intergenic | 40.0% | |
| GTTGATACCAGCATTGTTGT+TGG | - | chr1_2:60846899-60846918 | Msa0082050:CDS | 40.0% | |
| GTCTTCATTATGCCAGAGAA+CGG | + | chr1_2:60846965-60846984 | None:intergenic | 40.0% | |
| TTCTCTGGCATAATGAAGAC+AGG | - | chr1_2:60846965-60846984 | Msa0082050:CDS | 40.0% | |
| CAGGAAGAGAGTCCTTAAAA+AGG | - | chr1_2:60846984-60847003 | Msa0082050:CDS | 40.0% | |
| !!! | TGTTGCTTTTTTTCCCTGCT+AGG | - | chr1_2:60847047-60847066 | Msa0082050:CDS | 40.0% |
| CCCTGCTAGGATGTTAATAT+TGG | - | chr1_2:60847060-60847079 | Msa0082050:exon | 40.0% | |
| CCCAATATTAACATCCTAGC+AGG | + | chr1_2:60847064-60847083 | None:intergenic | 40.0% | |
| ! | GTGTATAAAACAAGGGCACA+TGG | - | chr1_2:60847156-60847175 | Msa0082050:five_prime_UTR | 40.0% |
| ! | CACATGGTTAGCTGAATGTT+AGG | - | chr1_2:60847172-60847191 | Msa0082050:five_prime_UTR | 40.0% |
| GTGGCCATAGAGATTCCAAT+GGG | + | chr1_2:60844033-60844052 | None:intergenic | 45.0% | |
| TGTGGCCATAGAGATTCCAA+TGG | + | chr1_2:60844034-60844053 | None:intergenic | 45.0% | |
| AATCTCTATGGCCACAACGA+CGG | - | chr1_2:60844038-60844057 | Msa0082050:CDS | 45.0% | |
| GTATGCTCAGATGTCACACT+TGG | - | chr1_2:60844396-60844415 | Msa0082050:intron | 45.0% | |
| ATGCTCAGATGTCACACTTG+GGG | - | chr1_2:60844398-60844417 | Msa0082050:intron | 45.0% | |
| TTTAAGCGAAACCCTACCCA+GGG | + | chr1_2:60844874-60844893 | None:intergenic | 45.0% | |
| ACCAAGGAGCCAAATAATGG+TGG | - | chr1_2:60845334-60845353 | Msa0082050:CDS | 45.0% | |
| ! | TCCACCATTATTTGGCTCCT+TGG | + | chr1_2:60845338-60845357 | None:intergenic | 45.0% |
| CTTCTGCGTTCATCATGTCA+AGG | + | chr1_2:60845489-60845508 | None:intergenic | 45.0% | |
| TGACATGATGAACGCAGAAG+TGG | - | chr1_2:60845489-60845508 | Msa0082050:CDS | 45.0% | |
| !! | TACTGATTCAGTGACAGCAG+TGG | - | chr1_2:60845528-60845547 | Msa0082050:CDS | 45.0% |
| ATCTGCGATGATAACCAGAG+TGG | - | chr1_2:60845628-60845647 | Msa0082050:CDS | 45.0% | |
| GTTCGGAGTCATTAGCATCT+TGG | - | chr1_2:60845786-60845805 | Msa0082050:intron | 45.0% | |
| TTCGTCACTATTGTCGAAGG+GGG | - | chr1_2:60845876-60845895 | Msa0082050:intron | 45.0% | |
| CATGCTCACCTAAAATCTCG+AGG | - | chr1_2:60846046-60846065 | Msa0082050:intron | 45.0% | |
| ! | CACGAGAACCTCGAGATTTT+AGG | + | chr1_2:60846057-60846076 | None:intergenic | 45.0% |
| CAAGGGAATGTCCAGTGAAA+CGG | + | chr1_2:60846087-60846106 | None:intergenic | 45.0% | |
| ACAGGAAGTAGAGAGGTGAT+TGG | + | chr1_2:60846163-60846182 | None:intergenic | 45.0% | |
| GGGGAACCAAATGTTATCAC+AGG | + | chr1_2:60846181-60846200 | None:intergenic | 45.0% | |
| GCATTATAATTGCCTGCACG+TGG | + | chr1_2:60846258-60846277 | None:intergenic | 45.0% | |
| !! | TTTTGGATAAGCAGGAGTGC+GGG | + | chr1_2:60846398-60846417 | None:intergenic | 45.0% |
| AGATATAGACCACTGCCTTG+CGG | + | chr1_2:60846614-60846633 | None:intergenic | 45.0% | |
| ! | AGCTTCTTGTCCGTGTCATT+AGG | + | chr1_2:60846659-60846678 | None:intergenic | 45.0% |
| CTCCAGATCCATAAGCAGAT+CGG | + | chr1_2:60846739-60846758 | None:intergenic | 45.0% | |
| GAGAGAAAAGACGCAAGGTA+TGG | - | chr1_2:60846852-60846871 | Msa0082050:CDS | 45.0% | |
| AGAAAAGACGCAAGGTATGG+TGG | - | chr1_2:60846855-60846874 | Msa0082050:CDS | 45.0% | |
| ! | ATACCAGCATTGTTGTTGGG+AGG | - | chr1_2:60846903-60846922 | Msa0082050:CDS | 45.0% |
| !! | TCCATGGTATCGGTCAGTAT+CGG | - | chr1_2:60846926-60846945 | Msa0082050:CDS | 45.0% |
| !! | GATATATAAATTATATTATT+TGG | - | chr1_2:60845700-60845719 | Msa0082050:CDS | 5.0% |
| GTTCCTTCGATCTCCATTGG+TGG | - | chr1_2:60843902-60843921 | Msa0082050:CDS | 50.0% | |
| GATCCACCAATGGAGATCGA+AGG | + | chr1_2:60843908-60843927 | None:intergenic | 50.0% | |
| AACGTTCTGTTCCGTCGTTG+TGG | + | chr1_2:60844052-60844071 | None:intergenic | 50.0% | |
| CTCCTCACCGTCATCTCTAA+CGG | + | chr1_2:60844134-60844153 | None:intergenic | 50.0% | |
| ! | GTTAGAGATGACGGTGAGGA+GGG | - | chr1_2:60844133-60844152 | Msa0082050:CDS | 50.0% |
| ! | TTAGAGATGACGGTGAGGAG+GGG | - | chr1_2:60844134-60844153 | Msa0082050:CDS | 50.0% |
| GATGTCACACTTGGGGAGTT+TGG | - | chr1_2:60844405-60844424 | Msa0082050:intron | 50.0% | |
| ! | CTTTCTTGGCTTGAATGGGG+TGG | - | chr1_2:60844686-60844705 | Msa0082050:CDS | 50.0% |
| GTTTAAGCGAAACCCTACCC+AGG | + | chr1_2:60844875-60844894 | None:intergenic | 50.0% | |
| GTGCAGATAAGATGCAGCAG+AGG | + | chr1_2:60845398-60845417 | None:intergenic | 50.0% | |
| ACTTCTTCAAATGCAGCGGC+TGG | - | chr1_2:60845445-60845464 | Msa0082050:CDS | 50.0% | |
| CGCAGAAGTGGCATCTTTGA+TGG | - | chr1_2:60845501-60845520 | Msa0082050:CDS | 50.0% | |
| TTCAGTGACAGCAGTGGTTG+CGG | - | chr1_2:60845534-60845553 | Msa0082050:CDS | 50.0% | |
| GGCAAAGGAGGAAGTAAAGC+AGG | - | chr1_2:60845555-60845574 | Msa0082050:CDS | 50.0% | |
| TCGCAGATGAACCATTCGCA+AGG | + | chr1_2:60845616-60845635 | None:intergenic | 50.0% | |
| TCGTCACTATTGTCGAAGGG+GGG | - | chr1_2:60845877-60845896 | Msa0082050:intron | 50.0% | |
| CACAAGGACATCCAAACCCT+GGG | + | chr1_2:60845969-60845988 | None:intergenic | 50.0% | |
| TTGGATGTCCTTGTGCACAG+AGG | - | chr1_2:60845974-60845993 | Msa0082050:intron | 50.0% | |
| CGTGCAACTTTCCGTTTCAC+TGG | - | chr1_2:60846073-60846092 | Msa0082050:intron | 50.0% | |
| CGTTTCACTGGACATTCCCT+TGG | - | chr1_2:60846085-60846104 | Msa0082050:intron | 50.0% | |
| TTCACTGGACATTCCCTTGG+TGG | - | chr1_2:60846088-60846107 | Msa0082050:intron | 50.0% | |
| ACATTCCCTTGGTGGAAGCT+TGG | - | chr1_2:60846096-60846115 | Msa0082050:intron | 50.0% | |
| TAGTGCCAAGCTTCCACCAA+GGG | + | chr1_2:60846104-60846123 | None:intergenic | 50.0% | |
| TGCGGCAGAAGATTATGGCT+TGG | + | chr1_2:60846596-60846615 | None:intergenic | 50.0% | |
| AGCCATAATCTTCTGCCGCA+AGG | - | chr1_2:60846596-60846615 | Msa0082050:CDS | 50.0% | |
| TGCCTTGCGGCAGAAGATTA+TGG | + | chr1_2:60846601-60846620 | None:intergenic | 50.0% | |
| AGAACGTCAACTTTGCGGCT+CGG | + | chr1_2:60846682-60846701 | None:intergenic | 50.0% | |
| GACCGATCTGCTTATGGATC+TGG | - | chr1_2:60846734-60846753 | Msa0082050:CDS | 50.0% | |
| CGATCTGCTTATGGATCTGG+AGG | - | chr1_2:60846737-60846756 | Msa0082050:CDS | 50.0% | |
| !! | CTCGCATCGATTTACGGATC+TGG | + | chr1_2:60846835-60846854 | None:intergenic | 50.0% |
| GATGCGAGAGAAAAGACGCA+AGG | - | chr1_2:60846847-60846866 | Msa0082050:CDS | 50.0% | |
| ATGCTGGTATCAACTCGTCG+CGG | + | chr1_2:60846893-60846912 | None:intergenic | 50.0% | |
| ! | CATTGTTGTTGGGAGGTCCA+TGG | - | chr1_2:60846910-60846929 | Msa0082050:CDS | 50.0% |
| TGTTGGGAGGTCCATGGTAT+CGG | - | chr1_2:60846916-60846935 | Msa0082050:CDS | 50.0% | |
| TTATGCCAGAGAACGGTGAC+TGG | + | chr1_2:60846958-60846977 | None:intergenic | 50.0% | |
| CTCAAGAACCCTGCTTGTAG+AGG | - | chr1_2:60847235-60847254 | Msa0082050:five_prime_UTR | 50.0% | |
| CACCGCATCTACCGTAAGTG+CGG | - | chr1_2:60843952-60843971 | Msa0082050:CDS | 55.0% | |
| CACCGCACTTACGGTAGATG+CGG | + | chr1_2:60843957-60843976 | None:intergenic | 55.0% | |
| GCATCTACCGTAAGTGCGGT+GGG | - | chr1_2:60843956-60843975 | Msa0082050:CDS | 55.0% | |
| TTCACGACCCACCGCACTTA+CGG | + | chr1_2:60843966-60843985 | None:intergenic | 55.0% | |
| CGACGGAACAGAACGTTCAG+TGG | - | chr1_2:60844055-60844074 | Msa0082050:CDS | 55.0% | |
| CTCACCGTCATCTCTAACGG+TGG | + | chr1_2:60844131-60844150 | None:intergenic | 55.0% | |
| ! | CACCGTTAGAGATGACGGTG+AGG | - | chr1_2:60844129-60844148 | Msa0082050:CDS | 55.0% |
| ! | CGTTAGAGATGACGGTGAGG+AGG | - | chr1_2:60844132-60844151 | Msa0082050:CDS | 55.0% |
| AGGAGGGGCAGAGAGAGAAT+TGG | - | chr1_2:60844149-60844168 | Msa0082050:CDS | 55.0% | |
| GGAGGGGCAGAGAGAGAATT+GGG | - | chr1_2:60844150-60844169 | Msa0082050:CDS | 55.0% | |
| TCAAATGCAGCGGCTGGTGA+AGG | - | chr1_2:60845451-60845470 | Msa0082050:CDS | 55.0% | |
| CTCGTTCGTCACCTTGCGAA+TGG | - | chr1_2:60845602-60845621 | Msa0082050:CDS | 55.0% | |
| GCACAAGGACATCCAAACCC+TGG | + | chr1_2:60845970-60845989 | None:intergenic | 55.0% | |
| GTAGTGCCAAGCTTCCACCA+AGG | + | chr1_2:60846105-60846124 | None:intergenic | 55.0% | |
| GGTTCCCCTTCCATCATGTG+TGG | - | chr1_2:60846193-60846212 | Msa0082050:intron | 55.0% | |
| TCCCCTTCCATCATGTGTGG+AGG | - | chr1_2:60846196-60846215 | Msa0082050:intron | 55.0% | |
| ! | GCCTCCACACATGATGGAAG+GGG | + | chr1_2:60846200-60846219 | None:intergenic | 55.0% |
| ! | CGCCTCCACACATGATGGAA+GGG | + | chr1_2:60846201-60846220 | None:intergenic | 55.0% |
| ! | TCGCCTCCACACATGATGGA+AGG | + | chr1_2:60846202-60846221 | None:intergenic | 55.0% |
| AGTGTCGCCTCCACACATGA+TGG | + | chr1_2:60846206-60846225 | None:intergenic | 55.0% | |
| ! | CAGGAGTGCGGGACTTTACT+TGG | + | chr1_2:60846387-60846406 | None:intergenic | 55.0% |
| AATCTTCTGCCGCAAGGCAG+TGG | - | chr1_2:60846602-60846621 | Msa0082050:CDS | 55.0% | |
| ACTCGTCGCGGTAGTACAAG+AGG | + | chr1_2:60846881-60846900 | None:intergenic | 55.0% | |
| GGACCTCCCAACAACAATGC+TGG | + | chr1_2:60846909-60846928 | None:intergenic | 55.0% | |
| GCCGATACTGACCGATACCA+TGG | + | chr1_2:60846930-60846949 | None:intergenic | 55.0% | |
| CGCACTTACGGTAGATGCGG+TGG | + | chr1_2:60843954-60843973 | None:intergenic | 60.0% | |
| CGCATCTACCGTAAGTGCGG+TGG | - | chr1_2:60843955-60843974 | Msa0082050:CDS | 60.0% | |
| ! | GTCTCTCGACGACGCCGTTT+TGG | - | chr1_2:60844081-60844100 | Msa0082050:CDS | 60.0% |
| GACAGCAGTGGTTGCGGCAA+AGG | - | chr1_2:60845540-60845559 | Msa0082050:CDS | 60.0% | |
| AGCAGTGGTTGCGGCAAAGG+AGG | - | chr1_2:60845543-60845562 | Msa0082050:CDS | 60.0% | |
| ATTGCCTGCACGTGGCTTCG+CGG | + | chr1_2:60846250-60846269 | None:intergenic | 60.0% | |
| CAGAGAACGGTGACTGGCGT+TGG | + | chr1_2:60846952-60846971 | None:intergenic | 60.0% | |
| CAACGCCAGTCACCGTTCTC+TGG | - | chr1_2:60846950-60846969 | Msa0082050:CDS | 60.0% | |
| CCTGCACGTGGCTTCGCGGC+AGG | + | chr1_2:60846246-60846265 | None:intergenic | 75.0% | |
| CCTGCCGCGAAGCCACGTGC+AGG | - | chr1_2:60846243-60846262 | Msa0082050:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 60843631 | 60847307 | 60843631 | ID=Msa0082050;Name=Msa0082050 |
| chr1_2 | mRNA | 60843631 | 60847307 | 60843631 | ID=Msa0082050-mRNA-1;Parent=Msa0082050;Name=Msa0082050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=241|1|1|1|1|1|5|196|698 |
| chr1_2 | exon | 60843631 | 60844405 | 60843631 | ID=Msa0082050-mRNA-1:exon:19900;Parent=Msa0082050-mRNA-1 |
| chr1_2 | exon | 60844551 | 60844967 | 60844551 | ID=Msa0082050-mRNA-1:exon:19899;Parent=Msa0082050-mRNA-1 |
| chr1_2 | exon | 60845094 | 60845153 | 60845094 | ID=Msa0082050-mRNA-1:exon:19898;Parent=Msa0082050-mRNA-1 |
| chr1_2 | exon | 60845266 | 60845727 | 60845266 | ID=Msa0082050-mRNA-1:exon:19897;Parent=Msa0082050-mRNA-1 |
| chr1_2 | exon | 60846488 | 60847307 | 60846488 | ID=Msa0082050-mRNA-1:exon:19896;Parent=Msa0082050-mRNA-1 |
| chr1_2 | five_prime_UTR | 60847067 | 60847307 | 60847067 | ID=Msa0082050-mRNA-1:five_prime_utr;Parent=Msa0082050-mRNA-1 |
| chr1_2 | CDS | 60846488 | 60847066 | 60846488 | ID=Msa0082050-mRNA-1:cds;Parent=Msa0082050-mRNA-1 |
| chr1_2 | CDS | 60845266 | 60845727 | 60845266 | ID=Msa0082050-mRNA-1:cds;Parent=Msa0082050-mRNA-1 |
| chr1_2 | CDS | 60845094 | 60845153 | 60845094 | ID=Msa0082050-mRNA-1:cds;Parent=Msa0082050-mRNA-1 |
| chr1_2 | CDS | 60844551 | 60844967 | 60844551 | ID=Msa0082050-mRNA-1:cds;Parent=Msa0082050-mRNA-1 |
| chr1_2 | CDS | 60843827 | 60844405 | 60843827 | ID=Msa0082050-mRNA-1:cds;Parent=Msa0082050-mRNA-1 |
| chr1_2 | three_prime_UTR | 60843631 | 60843826 | 60843631 | ID=Msa0082050-mRNA-1:three_prime_utr;Parent=Msa0082050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
