Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121700 | XP_003624196.1 | 98.225 | 169 | 1 | 1 | 1 | 167 | 1 | 169 | 7.64e-116 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121700 | G7KRK5 | 98.225 | 169 | 1 | 1 | 1 | 167 | 1 | 169 | 3.65e-116 | 337 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044000 | Msa1121700 | 0.805660 | 1.199284e-49 | -8.615850e-47 |
| Msa0613340 | Msa1121700 | 0.817191 | 3.747689e-52 | -8.615850e-47 |
| Msa0652940 | Msa1121700 | 0.817534 | 3.137000e-52 | -8.615850e-47 |
| Msa0658890 | Msa1121700 | 0.808831 | 2.552959e-50 | -8.615850e-47 |
| Msa0840300 | Msa1121700 | 0.822629 | 2.138952e-53 | -8.615850e-47 |
| Msa0127800 | Msa1121700 | 0.801725 | 7.864526e-49 | -8.615850e-47 |
| Msa0396290 | Msa1121700 | 0.804480 | 2.116641e-49 | -8.615850e-47 |
| Msa0454360 | Msa1121700 | 0.804028 | 2.628703e-49 | -8.615850e-47 |
| Msa1029050 | Msa1121700 | 0.816883 | 4.396300e-52 | -8.615850e-47 |
| Msa0277010 | Msa1121700 | -0.829658 | 4.549954e-55 | -8.615850e-47 |
| Msa1120740 | Msa1121700 | 0.831281 | 1.824134e-55 | -8.615850e-47 |
| Msa1121700 | Msa1122150 | 0.803311 | 3.704383e-49 | -8.615850e-47 |
| Msa1121700 | Msa1231840 | 0.808095 | 3.664372e-50 | -8.615850e-47 |
| Msa1121700 | Msa1420820 | 0.844936 | 5.551890e-59 | -8.615850e-47 |
| Msa1121700 | Msa1458750 | 0.808782 | 2.615458e-50 | -8.615850e-47 |
| Msa0567350 | Msa1121700 | 0.800979 | 1.117573e-48 | -8.615850e-47 |
| Msa0888260 | Msa1121700 | 0.826645 | 2.421916e-54 | -8.615850e-47 |
| Msa0919860 | Msa1121700 | 0.823082 | 1.677010e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121700 | MtrunA17_Chr7g0249501 | 98.225 | 169 | 1 | 1 | 1 | 167 | 1 | 169 | 7.02e-120 | 337 |
| Msa1121700 | MtrunA17_Chr7g0234601 | 60.526 | 114 | 44 | 1 | 39 | 152 | 36 | 148 | 1.93e-46 | 151 |
| Msa1121700 | MtrunA17_Chr2g0280591 | 44.961 | 129 | 70 | 1 | 27 | 155 | 16 | 143 | 1.52e-35 | 123 |
| Msa1121700 | MtrunA17_Chr4g0042211 | 48.718 | 117 | 59 | 1 | 39 | 155 | 29 | 144 | 4.56e-35 | 122 |
| Msa1121700 | MtrunA17_Chr4g0048881 | 38.571 | 140 | 79 | 2 | 14 | 153 | 12 | 144 | 2.29e-29 | 107 |
| Msa1121700 | MtrunA17_Chr4g0048871 | 35.099 | 151 | 92 | 1 | 3 | 153 | 1 | 145 | 1.45e-28 | 105 |
| Msa1121700 | MtrunA17_Chr4g0048861 | 35.374 | 147 | 92 | 2 | 7 | 153 | 1 | 144 | 3.75e-27 | 101 |
| Msa1121700 | MtrunA17_Chr8g0378501 | 40.650 | 123 | 70 | 3 | 39 | 160 | 31 | 151 | 1.17e-25 | 97.8 |
| Msa1121700 | MtrunA17_Chr4g0031861 | 37.500 | 120 | 74 | 1 | 34 | 153 | 26 | 144 | 3.01e-25 | 96.7 |
| Msa1121700 | MtrunA17_Chr8g0378491 | 38.710 | 124 | 75 | 1 | 30 | 153 | 21 | 143 | 5.71e-25 | 96.3 |
| Msa1121700 | MtrunA17_Chr7g0269431 | 31.579 | 133 | 86 | 3 | 16 | 147 | 11 | 139 | 2.41e-14 | 67.8 |
| Msa1121700 | MtrunA17_Chr1g0195381 | 29.032 | 124 | 83 | 2 | 38 | 159 | 23 | 143 | 4.24e-14 | 67.4 |
| Msa1121700 | MtrunA17_Chr1g0195361 | 30.469 | 128 | 81 | 4 | 40 | 165 | 34 | 155 | 9.18e-14 | 66.6 |
| Msa1121700 | MtrunA17_Chr6g0485071 | 35.345 | 116 | 66 | 4 | 42 | 152 | 38 | 149 | 1.64e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121700 | AT3G07470.3 | 50.685 | 146 | 64 | 1 | 17 | 154 | 1 | 146 | 1.52e-51 | 164 |
| Msa1121700 | AT3G07470.2 | 50.685 | 146 | 64 | 1 | 17 | 154 | 1 | 146 | 1.75e-51 | 164 |
| Msa1121700 | AT3G07470.1 | 50.685 | 146 | 64 | 1 | 17 | 154 | 1 | 146 | 3.03e-51 | 164 |
| Msa1121700 | AT3G07460.1 | 50.350 | 143 | 63 | 2 | 18 | 152 | 1 | 143 | 8.10e-48 | 155 |
| Msa1121700 | AT3G07460.2 | 50.350 | 143 | 63 | 2 | 18 | 152 | 1 | 143 | 7.55e-46 | 153 |
| Msa1121700 | AT5G16380.1 | 53.623 | 138 | 64 | 0 | 16 | 153 | 8 | 145 | 2.23e-45 | 149 |
| Msa1121700 | AT1G61667.1 | 52.800 | 125 | 59 | 0 | 30 | 154 | 13 | 137 | 2.62e-42 | 140 |
| Msa1121700 | AT1G61667.2 | 52.800 | 125 | 59 | 0 | 30 | 154 | 49 | 173 | 5.55e-42 | 140 |
| Msa1121700 | AT5G54530.1 | 50.000 | 118 | 58 | 1 | 38 | 155 | 28 | 144 | 1.50e-37 | 128 |
| Msa1121700 | AT5G19860.1 | 37.607 | 117 | 72 | 1 | 37 | 153 | 34 | 149 | 6.38e-22 | 89.0 |
| Msa1121700 | AT1G55265.1 | 38.793 | 116 | 68 | 3 | 39 | 153 | 54 | 167 | 7.80e-21 | 85.9 |
| Msa1121700 | AT4G02360.1 | 28.873 | 142 | 97 | 2 | 20 | 160 | 10 | 148 | 1.24e-19 | 82.0 |
| Msa1121700 | AT1G02813.1 | 31.884 | 138 | 85 | 3 | 16 | 152 | 7 | 136 | 1.03e-16 | 74.3 |
| Msa1121700 | AT4G02370.1 | 27.206 | 136 | 94 | 2 | 19 | 152 | 12 | 144 | 2.96e-16 | 73.6 |
| Msa1121700 | AT1G02816.1 | 26.515 | 132 | 92 | 2 | 31 | 160 | 24 | 152 | 5.74e-15 | 70.1 |
| Msa1121700 | AT2G03350.1 | 29.457 | 129 | 87 | 3 | 26 | 152 | 46 | 172 | 1.48e-11 | 61.2 |
Find 59 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTATGATCCTAATATTA+AGG | 0.212709 | 7_3:+71844018 | Msa1121700:CDS |
| CAACCATCTACGATGAATTA+AGG | 0.222556 | 7_3:+71843873 | Msa1121700:CDS |
| TTCTCGTTCTTAGCGTTTCA+TGG | 0.234067 | 7_3:+71843819 | Msa1121700:CDS |
| GTTCTTATGGTTTCCTGTTA+AGG | 0.253897 | 7_3:+71844096 | Msa1121700:CDS |
| CTGCTCAGGAACTGTTCTTA+TGG | 0.260029 | 7_3:+71844083 | Msa1121700:CDS |
| GCTACATTGGCCTATGGTTT+TGG | 0.276776 | 7_3:+71845761 | Msa1121700:CDS |
| AAGAAGAAGAAGATGGAAAT+TGG | 0.279013 | 7_3:-71843798 | None:intergenic |
| GGGACAAAGGATGACAATTT+TGG | 0.285046 | 7_3:+71845732 | Msa1121700:CDS |
| TTCTTATGGTTTCCTGTTAA+GGG | 0.291646 | 7_3:+71844097 | Msa1121700:CDS |
| CCAAGGGTACCCTTAATATT+AGG | 0.319867 | 7_3:-71844028 | None:intergenic |
| GGCAAGATCAAAGGATTATC+TGG | 0.347833 | 7_3:+71844055 | Msa1121700:CDS |
| TGCCCTTAATTCATCGTAGA+TGG | 0.348117 | 7_3:-71843876 | None:intergenic |
| ATTAAGGGTACCCTTGGTTA+TGG | 0.369525 | 7_3:+71844034 | Msa1121700:CDS |
| TCAACACGAATGCCCTTAAC+AGG | 0.369824 | 7_3:-71844109 | None:intergenic |
| TGGAACCAGTGGTGAATTCC+AGG | 0.379673 | 7_3:+71843952 | Msa1121700:CDS |
| TCATACTTCGTTATTCCCTT+TGG | 0.400855 | 7_3:-71843923 | None:intergenic |
| TGGCAAAATCTGTGCTAGTC+AGG | 0.434941 | 7_3:+71845781 | Msa1121700:CDS |
| CACTATGATCCTAATATTAA+GGG | 0.436502 | 7_3:+71844019 | Msa1121700:CDS |
| GGTCTCATTCACTTTGATGT+TGG | 0.437916 | 7_3:+71844145 | Msa1121700:CDS |
| CCTAATATTAAGGGTACCCT+TGG | 0.447732 | 7_3:+71844028 | Msa1121700:CDS |
| AACCATCTACGATGAATTAA+GGG | 0.449016 | 7_3:+71843874 | Msa1121700:CDS |
| TAATGCAAGGTTTGAAAATG+AGG | 0.464352 | 7_3:+71843994 | Msa1121700:CDS |
| TGGTCAGCTACATTGGCCTA+TGG | 0.475181 | 7_3:+71845755 | Msa1121700:CDS |
| AAAACCTCAGGGTTACAATC+AGG | 0.488575 | 7_3:-71844211 | None:intergenic |
| TGGTTATGCACCTTCGCAAA+CGG | 0.492407 | 7_3:+71843839 | Msa1121700:CDS |
| CCCTTTGGTAGAAGCCCTAC+GGG | 0.493865 | 7_3:-71843908 | None:intergenic |
| CTCTCAATGGCTATGGCTAG+TGG | 0.510825 | 7_3:+71843758 | Msa1121700:exon |
| CGTGTTGATCTACCTAGCTC+TGG | 0.512045 | 7_3:+71844124 | Msa1121700:CDS |
| TACGATGAATTAAGGGCAAA+GGG | 0.512995 | 7_3:+71843881 | Msa1121700:CDS |
| AGAAGAAGATGGAAATTGGA+TGG | 0.513050 | 7_3:-71843794 | None:intergenic |
| CTTGGTTATGGCAAGATCAA+AGG | 0.516045 | 7_3:+71844046 | Msa1121700:CDS |
| TCCCTTTGGTAGAAGCCCTA+CGG | 0.517563 | 7_3:-71843909 | None:intergenic |
| TCTGTGCTAGTCAGGAATGT+TGG | 0.519710 | 7_3:+71845789 | Msa1121700:CDS |
| TCCCGTAGGGCTTCTACCAA+AGG | 0.520926 | 7_3:+71843907 | Msa1121700:CDS |
| CCCGTAGGGCTTCTACCAAA+GGG | 0.524834 | 7_3:+71843908 | Msa1121700:CDS |
| ATAACGAAGTATGAGATCAA+TGG | 0.526239 | 7_3:+71843932 | Msa1121700:CDS |
| ATTATCTGGTATGACTGCTC+AGG | 0.527016 | 7_3:+71844069 | Msa1121700:CDS |
| ATGATGTGCTGAGGGCCGTT+TGG | 0.533615 | 7_3:+71845560 | Msa1121700:CDS |
| ATGGTTCTTTCATCCATACC+TGG | 0.540615 | 7_3:-71843970 | None:intergenic |
| GGGCAAAGGGTCTTCCCGTA+GGG | 0.543039 | 7_3:+71843894 | Msa1121700:CDS |
| GGAATCAATCTCCTCTGTCA+AGG | 0.548212 | 7_3:+71845711 | Msa1121700:CDS |
| CCAGTGGTGAATTCCAGGTA+TGG | 0.563237 | 7_3:+71843957 | Msa1121700:CDS |
| GAATCAATCTCCTCTGTCAA+GGG | 0.565819 | 7_3:+71845712 | Msa1121700:CDS |
| CTACGATGAATTAAGGGCAA+AGG | 0.571816 | 7_3:+71843880 | Msa1121700:CDS |
| CCATACCTGGAATTCACCAC+TGG | 0.573203 | 7_3:-71843957 | None:intergenic |
| TCTCCTCTGTCAAGGGACAA+AGG | 0.584906 | 7_3:+71845719 | Msa1121700:CDS |
| AAGTGAATGAGACCAGAGCT+AGG | 0.587179 | 7_3:-71844136 | None:intergenic |
| AGGGCAAAGGGTCTTCCCGT+AGG | 0.591812 | 7_3:+71843893 | Msa1121700:CDS |
| TTTGATCTTGCCATAACCAA+GGG | 0.597810 | 7_3:-71844044 | None:intergenic |
| CATCCTTTGTCCCTTGACAG+AGG | 0.599238 | 7_3:-71845722 | None:intergenic |
| CTTTGATCTTGCCATAACCA+AGG | 0.603621 | 7_3:-71844045 | None:intergenic |
| TGAAAGAACCATGTAATGCA+AGG | 0.604149 | 7_3:+71843981 | Msa1121700:CDS |
| CTAGTCAGGAATGTTGGATA+CGG | 0.617698 | 7_3:+71845795 | Msa1121700:CDS |
| ACCTCAGGGTTACAATCAGG+AGG | 0.622444 | 7_3:-71844208 | None:intergenic |
| TGAATTTGAACCGTTTGCGA+AGG | 0.628533 | 7_3:-71843849 | None:intergenic |
| TATGAGATCAATGGAACCAG+TGG | 0.634964 | 7_3:+71843941 | Msa1121700:CDS |
| TCCTCCTGATTGTAACCCTG+AGG | 0.653771 | 7_3:+71844207 | Msa1121700:CDS |
| CTGATAGTGATGATGTGCTG+AGG | 0.658574 | 7_3:+71845551 | Msa1121700:CDS |
| TGATAGTGATGATGTGCTGA+GGG | 0.679899 | 7_3:+71845552 | Msa1121700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATTTTTTCTCTTTT+TGG | + | chr7_3:71844255-71844274 | Msa1121700:intron | 10.0% |
| !!! | ATTCATAATTTTTGTTATTT+GGG | + | chr7_3:71844463-71844482 | Msa1121700:intron | 10.0% |
| !!! | TATGAAATTTTTGATTAATT+TGG | + | chr7_3:71845505-71845524 | Msa1121700:intron | 10.0% |
| !!! | TTATTTATTTTTTCTCTTTT+TGG | + | chr7_3:71844255-71844274 | Msa1121700:intron | 10.0% |
| !!! | ATTCATAATTTTTGTTATTT+GGG | + | chr7_3:71844463-71844482 | Msa1121700:intron | 10.0% |
| !!! | TATGAAATTTTTGATTAATT+TGG | + | chr7_3:71845505-71845524 | Msa1121700:intron | 10.0% |
| !! | ATAAATAACTAAATCAAGAA+TGG | - | chr7_3:71844243-71844262 | None:intergenic | 15.0% |
| !!! | CATTCATAATTTTTGTTATT+TGG | + | chr7_3:71844462-71844481 | Msa1121700:intron | 15.0% |
| !!! | ATATAAGCAAAATCTTATTT+TGG | + | chr7_3:71844834-71844853 | Msa1121700:intron | 15.0% |
| !!! | TATGAATTTTGTATAATCTT+AGG | + | chr7_3:71845194-71845213 | Msa1121700:intron | 15.0% |
| !! | ATAAATAACTAAATCAAGAA+TGG | - | chr7_3:71844243-71844262 | None:intergenic | 15.0% |
| !!! | CATTCATAATTTTTGTTATT+TGG | + | chr7_3:71844462-71844481 | Msa1121700:intron | 15.0% |
| !!! | ATATAAGCAAAATCTTATTT+TGG | + | chr7_3:71844834-71844853 | Msa1121700:intron | 15.0% |
| !!! | TATGAATTTTGTATAATCTT+AGG | + | chr7_3:71845194-71845213 | Msa1121700:intron | 15.0% |
| !!! | AAATTCATGTTTTTAAGAGT+TGG | + | chr7_3:71844368-71844387 | Msa1121700:intron | 20.0% |
| !!! | AATTCATGTTTTTAAGAGTT+GGG | + | chr7_3:71844369-71844388 | Msa1121700:intron | 20.0% |
| !!! | AAGTTGTGATTTTTTTTTGT+TGG | + | chr7_3:71844431-71844450 | Msa1121700:intron | 20.0% |
| !!! | AGTTGTGATTTTTTTTTGTT+GGG | + | chr7_3:71844432-71844451 | Msa1121700:intron | 20.0% |
| !!! | ATTTTTTTTTGTTGGGTATT+TGG | + | chr7_3:71844439-71844458 | Msa1121700:intron | 20.0% |
| !! | ATATCTATGTAGTTATTCTT+GGG | + | chr7_3:71844549-71844568 | Msa1121700:intron | 20.0% |
| !! | ATTTACTAAGTGTGATTTAA+AGG | + | chr7_3:71845134-71845153 | Msa1121700:intron | 20.0% |
| !!! | ATTTTATGGAAAATTGGAAA+GGG | - | chr7_3:71845250-71845269 | None:intergenic | 20.0% |
| !! | TTTATAATTGCAGAAAATTG+TGG | - | chr7_3:71845347-71845366 | None:intergenic | 20.0% |
| !!! | ACAATTTTCTGCAATTATAA+AGG | + | chr7_3:71845346-71845365 | Msa1121700:intron | 20.0% |
| !!! | AAATTTATGTTGTTTATCAG+TGG | + | chr7_3:71845478-71845497 | Msa1121700:intron | 20.0% |
| !!! | AATTTATGTTGTTTATCAGT+GGG | + | chr7_3:71845479-71845498 | Msa1121700:intron | 20.0% |
| !!! | AAATTCATGTTTTTAAGAGT+TGG | + | chr7_3:71844368-71844387 | Msa1121700:intron | 20.0% |
| !!! | AATTCATGTTTTTAAGAGTT+GGG | + | chr7_3:71844369-71844388 | Msa1121700:intron | 20.0% |
| !!! | AAGTTGTGATTTTTTTTTGT+TGG | + | chr7_3:71844431-71844450 | Msa1121700:intron | 20.0% |
| !!! | AGTTGTGATTTTTTTTTGTT+GGG | + | chr7_3:71844432-71844451 | Msa1121700:intron | 20.0% |
| !!! | ATTTTTTTTTGTTGGGTATT+TGG | + | chr7_3:71844439-71844458 | Msa1121700:intron | 20.0% |
| !! | ATATCTATGTAGTTATTCTT+GGG | + | chr7_3:71844549-71844568 | Msa1121700:intron | 20.0% |
| !! | ATTTACTAAGTGTGATTTAA+AGG | + | chr7_3:71845134-71845153 | Msa1121700:intron | 20.0% |
| !!! | ATTTTATGGAAAATTGGAAA+GGG | - | chr7_3:71845250-71845269 | None:intergenic | 20.0% |
| !! | TTTATAATTGCAGAAAATTG+TGG | - | chr7_3:71845347-71845366 | None:intergenic | 20.0% |
| !!! | ACAATTTTCTGCAATTATAA+AGG | + | chr7_3:71845346-71845365 | Msa1121700:intron | 20.0% |
| !!! | AAATTTATGTTGTTTATCAG+TGG | + | chr7_3:71845478-71845497 | Msa1121700:intron | 20.0% |
| !!! | AATTTATGTTGTTTATCAGT+GGG | + | chr7_3:71845479-71845498 | Msa1121700:intron | 20.0% |
| ! | TCACTATGATCCTAATATTA+AGG | + | chr7_3:71844018-71844037 | Msa1121700:CDS | 25.0% |
| ! | CACTATGATCCTAATATTAA+GGG | + | chr7_3:71844019-71844038 | Msa1121700:CDS | 25.0% |
| !!! | AGATTCATGTTTTTGTTATC+AGG | + | chr7_3:71844312-71844331 | Msa1121700:intron | 25.0% |
| !!! | GATTCATGTTTTTGTTATCA+GGG | + | chr7_3:71844313-71844332 | Msa1121700:intron | 25.0% |
| !!! | TTTGAAGTTGTGATTTTTGT+TGG | + | chr7_3:71844338-71844357 | Msa1121700:intron | 25.0% |
| !! | TTGAAGTTGTGATTTTTGTT+GGG | + | chr7_3:71844339-71844358 | Msa1121700:intron | 25.0% |
| !! | AAAGTTGTGATTTTTATGGT+TGG | + | chr7_3:71844487-71844506 | Msa1121700:intron | 25.0% |
| !! | AAGTTGTGATTTTTATGGTT+GGG | + | chr7_3:71844488-71844507 | Msa1121700:intron | 25.0% |
| ! | CATATCTATGTAGTTATTCT+TGG | + | chr7_3:71844548-71844567 | Msa1121700:intron | 25.0% |
| !! | GCAAAATTGTAAGATTTTGT+GGG | - | chr7_3:71844787-71844806 | None:intergenic | 25.0% |
| !!! | TAAGCAAAATCTTATTTTGG+TGG | + | chr7_3:71844837-71844856 | Msa1121700:intron | 25.0% |
| ! | AATTAGATATGTATTCCAAG+TGG | + | chr7_3:71844989-71845008 | Msa1121700:intron | 25.0% |
| !! | TTTTATGGAAAATTGGAAAG+GGG | - | chr7_3:71845249-71845268 | None:intergenic | 25.0% |
| !! | GATTTTATGGAAAATTGGAA+AGG | - | chr7_3:71845251-71845270 | None:intergenic | 25.0% |
| !! | TAGTTAAAATCGGGATTTTA+TGG | - | chr7_3:71845264-71845283 | None:intergenic | 25.0% |
| ! | ATTTGCAAGGTAGTTAAAAT+CGG | - | chr7_3:71845274-71845293 | None:intergenic | 25.0% |
| !! | AACAAACATGACCAATTTTA+TGG | + | chr7_3:71845416-71845435 | Msa1121700:intron | 25.0% |
| !! | ATTTATGTTGTTTATCAGTG+GGG | + | chr7_3:71845480-71845499 | Msa1121700:intron | 25.0% |
| !!! | ATTTGGTGTTTAATTTACTC+AGG | + | chr7_3:71845522-71845541 | Msa1121700:intron | 25.0% |
| ! | TCACTATGATCCTAATATTA+AGG | + | chr7_3:71844018-71844037 | Msa1121700:CDS | 25.0% |
| ! | CACTATGATCCTAATATTAA+GGG | + | chr7_3:71844019-71844038 | Msa1121700:CDS | 25.0% |
| !!! | AGATTCATGTTTTTGTTATC+AGG | + | chr7_3:71844312-71844331 | Msa1121700:intron | 25.0% |
| !!! | GATTCATGTTTTTGTTATCA+GGG | + | chr7_3:71844313-71844332 | Msa1121700:intron | 25.0% |
| !!! | TTTGAAGTTGTGATTTTTGT+TGG | + | chr7_3:71844338-71844357 | Msa1121700:intron | 25.0% |
| !! | TTGAAGTTGTGATTTTTGTT+GGG | + | chr7_3:71844339-71844358 | Msa1121700:intron | 25.0% |
| !! | AAAGTTGTGATTTTTATGGT+TGG | + | chr7_3:71844487-71844506 | Msa1121700:intron | 25.0% |
| !! | AAGTTGTGATTTTTATGGTT+GGG | + | chr7_3:71844488-71844507 | Msa1121700:intron | 25.0% |
| ! | CATATCTATGTAGTTATTCT+TGG | + | chr7_3:71844548-71844567 | Msa1121700:intron | 25.0% |
| !! | GCAAAATTGTAAGATTTTGT+GGG | - | chr7_3:71844787-71844806 | None:intergenic | 25.0% |
| !!! | TAAGCAAAATCTTATTTTGG+TGG | + | chr7_3:71844837-71844856 | Msa1121700:intron | 25.0% |
| ! | AATTAGATATGTATTCCAAG+TGG | + | chr7_3:71844989-71845008 | Msa1121700:intron | 25.0% |
| !! | TTTTATGGAAAATTGGAAAG+GGG | - | chr7_3:71845249-71845268 | None:intergenic | 25.0% |
| !! | GATTTTATGGAAAATTGGAA+AGG | - | chr7_3:71845251-71845270 | None:intergenic | 25.0% |
| !! | TAGTTAAAATCGGGATTTTA+TGG | - | chr7_3:71845264-71845283 | None:intergenic | 25.0% |
| ! | ATTTGCAAGGTAGTTAAAAT+CGG | - | chr7_3:71845274-71845293 | None:intergenic | 25.0% |
| !! | AACAAACATGACCAATTTTA+TGG | + | chr7_3:71845416-71845435 | Msa1121700:intron | 25.0% |
| !! | ATTTATGTTGTTTATCAGTG+GGG | + | chr7_3:71845480-71845499 | Msa1121700:intron | 25.0% |
| !!! | ATTTGGTGTTTAATTTACTC+AGG | + | chr7_3:71845522-71845541 | Msa1121700:intron | 25.0% |
| AAGAAGAAGAAGATGGAAAT+TGG | - | chr7_3:71843801-71843820 | None:intergenic | 30.0% | |
| AACCATCTACGATGAATTAA+GGG | + | chr7_3:71843874-71843893 | Msa1121700:CDS | 30.0% | |
| ATAACGAAGTATGAGATCAA+TGG | + | chr7_3:71843932-71843951 | Msa1121700:CDS | 30.0% | |
| ! | TTTTCAAACCTTGCATTACA+TGG | - | chr7_3:71843992-71844011 | None:intergenic | 30.0% |
| TAATGCAAGGTTTGAAAATG+AGG | + | chr7_3:71843994-71844013 | Msa1121700:CDS | 30.0% | |
| TTCTTATGGTTTCCTGTTAA+GGG | + | chr7_3:71844097-71844116 | Msa1121700:CDS | 30.0% | |
| AATGGATGAAAAAAACCTCA+GGG | - | chr7_3:71844225-71844244 | None:intergenic | 30.0% | |
| TGAAATTCATGTTGTGTAGT+TGG | + | chr7_3:71844282-71844301 | Msa1121700:intron | 30.0% | |
| !! | GATTCAGGTTTTCTGTTATT+CGG | + | chr7_3:71844399-71844418 | Msa1121700:intron | 30.0% |
| !! | ATTCAGGTTTTCTGTTATTC+GGG | + | chr7_3:71844400-71844419 | Msa1121700:intron | 30.0% |
| ! | GGGTAAAGTTGTGATTTTTA+TGG | + | chr7_3:71844483-71844502 | Msa1121700:intron | 30.0% |
| GTTTGACAACACTTGTAATA+AGG | - | chr7_3:71844665-71844684 | None:intergenic | 30.0% | |
| CTCTGTTAAATAACATATCG+CGG | - | chr7_3:71844735-71844754 | None:intergenic | 30.0% | |
| ! | CGCAAAATTGTAAGATTTTG+TGG | - | chr7_3:71844788-71844807 | None:intergenic | 30.0% |
| TGGATTATAACAATTTCCAC+GGG | - | chr7_3:71844866-71844885 | None:intergenic | 30.0% | |
| ! | GTGGATTATAACAATTTCCA+CGG | - | chr7_3:71844867-71844886 | None:intergenic | 30.0% |
| ATTATACAAGTATGATCGCA+GGG | + | chr7_3:71844902-71844921 | Msa1121700:intron | 30.0% | |
| ! | ATCGGGATTTTATGGAAAAT+TGG | - | chr7_3:71845256-71845275 | None:intergenic | 30.0% |
| TTTGCAAGGTAGTTAAAATC+GGG | - | chr7_3:71845273-71845292 | None:intergenic | 30.0% | |
| ACCTTGCAAATAATAGCTAT+AGG | + | chr7_3:71845283-71845302 | Msa1121700:intron | 30.0% | |
| ACCTATAGCTATTATTTGCA+AGG | - | chr7_3:71845287-71845306 | None:intergenic | 30.0% | |
| !!! | CTGTTGGTTTCTTTTTTGTT+AGG | + | chr7_3:71845449-71845468 | Msa1121700:intron | 30.0% |
| ! | AGTCTTTTTCTTTTTCTGCT+TGG | + | chr7_3:71845685-71845704 | Msa1121700:CDS | 30.0% |
| ! | TTTTCTTTTTCTGCTTGGAT+TGG | + | chr7_3:71845690-71845709 | Msa1121700:CDS | 30.0% |
| AAGAAGAAGAAGATGGAAAT+TGG | - | chr7_3:71843801-71843820 | None:intergenic | 30.0% | |
| AACCATCTACGATGAATTAA+GGG | + | chr7_3:71843874-71843893 | Msa1121700:CDS | 30.0% | |
| ATAACGAAGTATGAGATCAA+TGG | + | chr7_3:71843932-71843951 | Msa1121700:CDS | 30.0% | |
| ! | TTTTCAAACCTTGCATTACA+TGG | - | chr7_3:71843992-71844011 | None:intergenic | 30.0% |
| TAATGCAAGGTTTGAAAATG+AGG | + | chr7_3:71843994-71844013 | Msa1121700:CDS | 30.0% | |
| TTCTTATGGTTTCCTGTTAA+GGG | + | chr7_3:71844097-71844116 | Msa1121700:CDS | 30.0% | |
| AATGGATGAAAAAAACCTCA+GGG | - | chr7_3:71844225-71844244 | None:intergenic | 30.0% | |
| TGAAATTCATGTTGTGTAGT+TGG | + | chr7_3:71844282-71844301 | Msa1121700:intron | 30.0% | |
| !! | GATTCAGGTTTTCTGTTATT+CGG | + | chr7_3:71844399-71844418 | Msa1121700:intron | 30.0% |
| !! | ATTCAGGTTTTCTGTTATTC+GGG | + | chr7_3:71844400-71844419 | Msa1121700:intron | 30.0% |
| ! | GGGTAAAGTTGTGATTTTTA+TGG | + | chr7_3:71844483-71844502 | Msa1121700:intron | 30.0% |
| GTTTGACAACACTTGTAATA+AGG | - | chr7_3:71844665-71844684 | None:intergenic | 30.0% | |
| CTCTGTTAAATAACATATCG+CGG | - | chr7_3:71844735-71844754 | None:intergenic | 30.0% | |
| ! | CGCAAAATTGTAAGATTTTG+TGG | - | chr7_3:71844788-71844807 | None:intergenic | 30.0% |
| TGGATTATAACAATTTCCAC+GGG | - | chr7_3:71844866-71844885 | None:intergenic | 30.0% | |
| ! | GTGGATTATAACAATTTCCA+CGG | - | chr7_3:71844867-71844886 | None:intergenic | 30.0% |
| ATTATACAAGTATGATCGCA+GGG | + | chr7_3:71844902-71844921 | Msa1121700:intron | 30.0% | |
| ! | ATCGGGATTTTATGGAAAAT+TGG | - | chr7_3:71845256-71845275 | None:intergenic | 30.0% |
| TTTGCAAGGTAGTTAAAATC+GGG | - | chr7_3:71845273-71845292 | None:intergenic | 30.0% | |
| ACCTTGCAAATAATAGCTAT+AGG | + | chr7_3:71845283-71845302 | Msa1121700:intron | 30.0% | |
| ACCTATAGCTATTATTTGCA+AGG | - | chr7_3:71845287-71845306 | None:intergenic | 30.0% | |
| !!! | CTGTTGGTTTCTTTTTTGTT+AGG | + | chr7_3:71845449-71845468 | Msa1121700:intron | 30.0% |
| ! | AGTCTTTTTCTTTTTCTGCT+TGG | + | chr7_3:71845685-71845704 | Msa1121700:CDS | 30.0% |
| ! | TTTTCTTTTTCTGCTTGGAT+TGG | + | chr7_3:71845690-71845709 | Msa1121700:CDS | 30.0% |
| AGAAGAAGATGGAAATTGGA+TGG | - | chr7_3:71843797-71843816 | None:intergenic | 35.0% | |
| CAACCATCTACGATGAATTA+AGG | + | chr7_3:71843873-71843892 | Msa1121700:CDS | 35.0% | |
| TACGATGAATTAAGGGCAAA+GGG | + | chr7_3:71843881-71843900 | Msa1121700:CDS | 35.0% | |
| TCATACTTCGTTATTCCCTT+TGG | - | chr7_3:71843926-71843945 | None:intergenic | 35.0% | |
| TGAAAGAACCATGTAATGCA+AGG | + | chr7_3:71843981-71844000 | Msa1121700:CDS | 35.0% | |
| TTTGATCTTGCCATAACCAA+GGG | - | chr7_3:71844047-71844066 | None:intergenic | 35.0% | |
| GTTCTTATGGTTTCCTGTTA+AGG | + | chr7_3:71844096-71844115 | Msa1121700:CDS | 35.0% | |
| GAATGGATGAAAAAAACCTC+AGG | - | chr7_3:71844226-71844245 | None:intergenic | 35.0% | |
| !! | TAGTGTTGATGATTAGAGTG+AGG | + | chr7_3:71844577-71844596 | Msa1121700:intron | 35.0% |
| GATCTTATGTAAACAAGCCA+TGG | + | chr7_3:71844611-71844630 | Msa1121700:intron | 35.0% | |
| GAATTGTCTAGTGACAACTA+AGG | - | chr7_3:71844637-71844656 | None:intergenic | 35.0% | |
| CTTATATTCATAACCGCTGA+GGG | - | chr7_3:71844821-71844840 | None:intergenic | 35.0% | |
| TAATCGTTTCAAAGATCGTG+TGG | - | chr7_3:71844886-71844905 | None:intergenic | 35.0% | |
| GATTATACAAGTATGATCGC+AGG | + | chr7_3:71844901-71844920 | Msa1121700:intron | 35.0% | |
| TTATACAAGTATGATCGCAG+GGG | + | chr7_3:71844903-71844922 | Msa1121700:intron | 35.0% | |
| TATGTTGTTATGTGAGTCTC+AGG | + | chr7_3:71845032-71845051 | Msa1121700:intron | 35.0% | |
| ATGTTGTTATGTGAGTCTCA+GGG | + | chr7_3:71845033-71845052 | Msa1121700:intron | 35.0% | |
| GCAACTATTTATGTGAGCTA+TGG | + | chr7_3:71845099-71845118 | Msa1121700:intron | 35.0% | |
| GCAAATAATAGCTATAGGTG+TGG | + | chr7_3:71845288-71845307 | Msa1121700:intron | 35.0% | |
| GGTATAGCAATGTAACATAG+AGG | + | chr7_3:71845309-71845328 | Msa1121700:intron | 35.0% | |
| ! | TGACCAATTTTATGGCTTTC+AGG | + | chr7_3:71845424-71845443 | Msa1121700:intron | 35.0% |
| GTTCCTGAAAGCCATAAAAT+TGG | - | chr7_3:71845430-71845449 | None:intergenic | 35.0% | |
| CATGCTTATCTTCTACCAAA+CGG | - | chr7_3:71845578-71845597 | None:intergenic | 35.0% | |
| ! | ACAAAGGATGACAATTTTGG+TGG | + | chr7_3:71845735-71845754 | Msa1121700:CDS | 35.0% |
| ! | ACAGATTTTGCCAAAACCAT+AGG | - | chr7_3:71845774-71845793 | None:intergenic | 35.0% |
| AGAAGAAGATGGAAATTGGA+TGG | - | chr7_3:71843797-71843816 | None:intergenic | 35.0% | |
| CAACCATCTACGATGAATTA+AGG | + | chr7_3:71843873-71843892 | Msa1121700:CDS | 35.0% | |
| TACGATGAATTAAGGGCAAA+GGG | + | chr7_3:71843881-71843900 | Msa1121700:CDS | 35.0% | |
| TCATACTTCGTTATTCCCTT+TGG | - | chr7_3:71843926-71843945 | None:intergenic | 35.0% | |
| TGAAAGAACCATGTAATGCA+AGG | + | chr7_3:71843981-71844000 | Msa1121700:CDS | 35.0% | |
| TTTGATCTTGCCATAACCAA+GGG | - | chr7_3:71844047-71844066 | None:intergenic | 35.0% | |
| GTTCTTATGGTTTCCTGTTA+AGG | + | chr7_3:71844096-71844115 | Msa1121700:CDS | 35.0% | |
| GAATGGATGAAAAAAACCTC+AGG | - | chr7_3:71844226-71844245 | None:intergenic | 35.0% | |
| !! | TAGTGTTGATGATTAGAGTG+AGG | + | chr7_3:71844577-71844596 | Msa1121700:intron | 35.0% |
| GATCTTATGTAAACAAGCCA+TGG | + | chr7_3:71844611-71844630 | Msa1121700:intron | 35.0% | |
| GAATTGTCTAGTGACAACTA+AGG | - | chr7_3:71844637-71844656 | None:intergenic | 35.0% | |
| CTTATATTCATAACCGCTGA+GGG | - | chr7_3:71844821-71844840 | None:intergenic | 35.0% | |
| TAATCGTTTCAAAGATCGTG+TGG | - | chr7_3:71844886-71844905 | None:intergenic | 35.0% | |
| GATTATACAAGTATGATCGC+AGG | + | chr7_3:71844901-71844920 | Msa1121700:intron | 35.0% | |
| TTATACAAGTATGATCGCAG+GGG | + | chr7_3:71844903-71844922 | Msa1121700:intron | 35.0% | |
| TATGTTGTTATGTGAGTCTC+AGG | + | chr7_3:71845032-71845051 | Msa1121700:intron | 35.0% | |
| ATGTTGTTATGTGAGTCTCA+GGG | + | chr7_3:71845033-71845052 | Msa1121700:intron | 35.0% | |
| GCAACTATTTATGTGAGCTA+TGG | + | chr7_3:71845099-71845118 | Msa1121700:intron | 35.0% | |
| GCAAATAATAGCTATAGGTG+TGG | + | chr7_3:71845288-71845307 | Msa1121700:intron | 35.0% | |
| GGTATAGCAATGTAACATAG+AGG | + | chr7_3:71845309-71845328 | Msa1121700:intron | 35.0% | |
| ! | TGACCAATTTTATGGCTTTC+AGG | + | chr7_3:71845424-71845443 | Msa1121700:intron | 35.0% |
| GTTCCTGAAAGCCATAAAAT+TGG | - | chr7_3:71845430-71845449 | None:intergenic | 35.0% | |
| CATGCTTATCTTCTACCAAA+CGG | - | chr7_3:71845578-71845597 | None:intergenic | 35.0% | |
| ! | ACAAAGGATGACAATTTTGG+TGG | + | chr7_3:71845735-71845754 | Msa1121700:CDS | 35.0% |
| ! | ACAGATTTTGCCAAAACCAT+AGG | - | chr7_3:71845774-71845793 | None:intergenic | 35.0% |
| GAACGAGAAGAAGAAGAAGA+TGG | - | chr7_3:71843808-71843827 | None:intergenic | 40.0% | |
| TTCTCGTTCTTAGCGTTTCA+TGG | + | chr7_3:71843819-71843838 | Msa1121700:CDS | 40.0% | |
| TGAATTTGAACCGTTTGCGA+AGG | - | chr7_3:71843852-71843871 | None:intergenic | 40.0% | |
| TGCCCTTAATTCATCGTAGA+TGG | - | chr7_3:71843879-71843898 | None:intergenic | 40.0% | |
| CTACGATGAATTAAGGGCAA+AGG | + | chr7_3:71843880-71843899 | Msa1121700:CDS | 40.0% | |
| TATGAGATCAATGGAACCAG+TGG | + | chr7_3:71843941-71843960 | Msa1121700:CDS | 40.0% | |
| ATGGTTCTTTCATCCATACC+TGG | - | chr7_3:71843973-71843992 | None:intergenic | 40.0% | |
| !! | CCAAGGGTACCCTTAATATT+AGG | - | chr7_3:71844031-71844050 | None:intergenic | 40.0% |
| !! | CCTAATATTAAGGGTACCCT+TGG | + | chr7_3:71844028-71844047 | Msa1121700:CDS | 40.0% |
| !! | ATTAAGGGTACCCTTGGTTA+TGG | + | chr7_3:71844034-71844053 | Msa1121700:CDS | 40.0% |
| CTTTGATCTTGCCATAACCA+AGG | - | chr7_3:71844048-71844067 | None:intergenic | 40.0% | |
| CTTGGTTATGGCAAGATCAA+AGG | + | chr7_3:71844046-71844065 | Msa1121700:CDS | 40.0% | |
| GGCAAGATCAAAGGATTATC+TGG | + | chr7_3:71844055-71844074 | Msa1121700:CDS | 40.0% | |
| ATTATCTGGTATGACTGCTC+AGG | + | chr7_3:71844069-71844088 | Msa1121700:CDS | 40.0% | |
| GGTCTCATTCACTTTGATGT+TGG | + | chr7_3:71844145-71844164 | Msa1121700:CDS | 40.0% | |
| AAAACCTCAGGGTTACAATC+AGG | - | chr7_3:71844214-71844233 | None:intergenic | 40.0% | |
| GAGTTGGGTATATGAGATTC+AGG | + | chr7_3:71844384-71844403 | Msa1121700:intron | 40.0% | |
| GCTTATATTCATAACCGCTG+AGG | - | chr7_3:71844822-71844841 | None:intergenic | 40.0% | |
| CAACATAGCTCACATAACAG+CGG | - | chr7_3:71845019-71845038 | None:intergenic | 40.0% | |
| TTATGGCTTTCAGGAACTGT+TGG | + | chr7_3:71845433-71845452 | Msa1121700:intron | 40.0% | |
| ! | TGATAGTGATGATGTGCTGA+GGG | + | chr7_3:71845552-71845571 | Msa1121700:CDS | 40.0% |
| TAAGCATGTTGCTGCATTTC+AGG | + | chr7_3:71845590-71845609 | Msa1121700:intron | 40.0% | |
| AATCATCTTAGCTGTGCTTG+TGG | + | chr7_3:71845632-71845651 | Msa1121700:intron | 40.0% | |
| GAATCAATCTCCTCTGTCAA+GGG | + | chr7_3:71845712-71845731 | Msa1121700:CDS | 40.0% | |
| ! | GGGACAAAGGATGACAATTT+TGG | + | chr7_3:71845732-71845751 | Msa1121700:CDS | 40.0% |
| !! | ATTTTGGTGGTCAGCTACAT+TGG | + | chr7_3:71845748-71845767 | Msa1121700:CDS | 40.0% |
| CTAGTCAGGAATGTTGGATA+CGG | + | chr7_3:71845795-71845814 | Msa1121700:CDS | 40.0% | |
| GAACGAGAAGAAGAAGAAGA+TGG | - | chr7_3:71843808-71843827 | None:intergenic | 40.0% | |
| TTCTCGTTCTTAGCGTTTCA+TGG | + | chr7_3:71843819-71843838 | Msa1121700:CDS | 40.0% | |
| TGAATTTGAACCGTTTGCGA+AGG | - | chr7_3:71843852-71843871 | None:intergenic | 40.0% | |
| TGCCCTTAATTCATCGTAGA+TGG | - | chr7_3:71843879-71843898 | None:intergenic | 40.0% | |
| CTACGATGAATTAAGGGCAA+AGG | + | chr7_3:71843880-71843899 | Msa1121700:CDS | 40.0% | |
| TATGAGATCAATGGAACCAG+TGG | + | chr7_3:71843941-71843960 | Msa1121700:CDS | 40.0% | |
| ATGGTTCTTTCATCCATACC+TGG | - | chr7_3:71843973-71843992 | None:intergenic | 40.0% | |
| !! | CCAAGGGTACCCTTAATATT+AGG | - | chr7_3:71844031-71844050 | None:intergenic | 40.0% |
| !! | CCTAATATTAAGGGTACCCT+TGG | + | chr7_3:71844028-71844047 | Msa1121700:CDS | 40.0% |
| !! | ATTAAGGGTACCCTTGGTTA+TGG | + | chr7_3:71844034-71844053 | Msa1121700:CDS | 40.0% |
| CTTTGATCTTGCCATAACCA+AGG | - | chr7_3:71844048-71844067 | None:intergenic | 40.0% | |
| CTTGGTTATGGCAAGATCAA+AGG | + | chr7_3:71844046-71844065 | Msa1121700:CDS | 40.0% | |
| GGCAAGATCAAAGGATTATC+TGG | + | chr7_3:71844055-71844074 | Msa1121700:CDS | 40.0% | |
| ATTATCTGGTATGACTGCTC+AGG | + | chr7_3:71844069-71844088 | Msa1121700:CDS | 40.0% | |
| GGTCTCATTCACTTTGATGT+TGG | + | chr7_3:71844145-71844164 | Msa1121700:CDS | 40.0% | |
| AAAACCTCAGGGTTACAATC+AGG | - | chr7_3:71844214-71844233 | None:intergenic | 40.0% | |
| GAGTTGGGTATATGAGATTC+AGG | + | chr7_3:71844384-71844403 | Msa1121700:intron | 40.0% | |
| GCTTATATTCATAACCGCTG+AGG | - | chr7_3:71844822-71844841 | None:intergenic | 40.0% | |
| CAACATAGCTCACATAACAG+CGG | - | chr7_3:71845019-71845038 | None:intergenic | 40.0% | |
| TTATGGCTTTCAGGAACTGT+TGG | + | chr7_3:71845433-71845452 | Msa1121700:intron | 40.0% | |
| ! | TGATAGTGATGATGTGCTGA+GGG | + | chr7_3:71845552-71845571 | Msa1121700:CDS | 40.0% |
| TAAGCATGTTGCTGCATTTC+AGG | + | chr7_3:71845590-71845609 | Msa1121700:intron | 40.0% | |
| AATCATCTTAGCTGTGCTTG+TGG | + | chr7_3:71845632-71845651 | Msa1121700:intron | 40.0% | |
| GAATCAATCTCCTCTGTCAA+GGG | + | chr7_3:71845712-71845731 | Msa1121700:CDS | 40.0% | |
| ! | GGGACAAAGGATGACAATTT+TGG | + | chr7_3:71845732-71845751 | Msa1121700:CDS | 40.0% |
| !! | ATTTTGGTGGTCAGCTACAT+TGG | + | chr7_3:71845748-71845767 | Msa1121700:CDS | 40.0% |
| CTAGTCAGGAATGTTGGATA+CGG | + | chr7_3:71845795-71845814 | Msa1121700:CDS | 40.0% | |
| TCTCTCTCTCTCTCTCTCAA+TGG | + | chr7_3:71843745-71843764 | Msa1121700:exon | 45.0% | |
| TCTCTCTCTCTCAATGGCTA+TGG | + | chr7_3:71843751-71843770 | Msa1121700:exon | 45.0% | |
| TGGTTATGCACCTTCGCAAA+CGG | + | chr7_3:71843839-71843858 | Msa1121700:CDS | 45.0% | |
| CTGCTCAGGAACTGTTCTTA+TGG | + | chr7_3:71844083-71844102 | Msa1121700:CDS | 45.0% | |
| TCAACACGAATGCCCTTAAC+AGG | - | chr7_3:71844112-71844131 | None:intergenic | 45.0% | |
| AAGTGAATGAGACCAGAGCT+AGG | - | chr7_3:71844139-71844158 | None:intergenic | 45.0% | |
| TCTAGTGACAACTAAGGCCA+TGG | - | chr7_3:71844631-71844650 | None:intergenic | 45.0% | |
| TCGCAATTTGTAGTTCCGCT+AGG | - | chr7_3:71844707-71844726 | None:intergenic | 45.0% | |
| !!! | CTTATTTTGGTGGAATCCCG+TGG | + | chr7_3:71844847-71844866 | Msa1121700:intron | 45.0% |
| ! | CTGATAGTGATGATGTGCTG+AGG | + | chr7_3:71845551-71845570 | Msa1121700:CDS | 45.0% |
| ATCTTAGCTGTGCTTGTGGT+TGG | + | chr7_3:71845636-71845655 | Msa1121700:intron | 45.0% | |
| GGAATCAATCTCCTCTGTCA+AGG | + | chr7_3:71845711-71845730 | Msa1121700:CDS | 45.0% | |
| !! | GCTACATTGGCCTATGGTTT+TGG | + | chr7_3:71845761-71845780 | Msa1121700:CDS | 45.0% |
| TGGCAAAATCTGTGCTAGTC+AGG | + | chr7_3:71845781-71845800 | Msa1121700:CDS | 45.0% | |
| TCTGTGCTAGTCAGGAATGT+TGG | + | chr7_3:71845789-71845808 | Msa1121700:CDS | 45.0% | |
| AGGAATGTTGGATACGGTTG+AGG | + | chr7_3:71845801-71845820 | Msa1121700:CDS | 45.0% | |
| TCTCTCTCTCTCTCTCTCAA+TGG | + | chr7_3:71843745-71843764 | Msa1121700:exon | 45.0% | |
| TCTCTCTCTCTCAATGGCTA+TGG | + | chr7_3:71843751-71843770 | Msa1121700:exon | 45.0% | |
| TGGTTATGCACCTTCGCAAA+CGG | + | chr7_3:71843839-71843858 | Msa1121700:CDS | 45.0% | |
| CTGCTCAGGAACTGTTCTTA+TGG | + | chr7_3:71844083-71844102 | Msa1121700:CDS | 45.0% | |
| TCAACACGAATGCCCTTAAC+AGG | - | chr7_3:71844112-71844131 | None:intergenic | 45.0% | |
| AAGTGAATGAGACCAGAGCT+AGG | - | chr7_3:71844139-71844158 | None:intergenic | 45.0% | |
| TCTAGTGACAACTAAGGCCA+TGG | - | chr7_3:71844631-71844650 | None:intergenic | 45.0% | |
| TCGCAATTTGTAGTTCCGCT+AGG | - | chr7_3:71844707-71844726 | None:intergenic | 45.0% | |
| !!! | CTTATTTTGGTGGAATCCCG+TGG | + | chr7_3:71844847-71844866 | Msa1121700:intron | 45.0% |
| ! | CTGATAGTGATGATGTGCTG+AGG | + | chr7_3:71845551-71845570 | Msa1121700:CDS | 45.0% |
| ATCTTAGCTGTGCTTGTGGT+TGG | + | chr7_3:71845636-71845655 | Msa1121700:intron | 45.0% | |
| GGAATCAATCTCCTCTGTCA+AGG | + | chr7_3:71845711-71845730 | Msa1121700:CDS | 45.0% | |
| !! | GCTACATTGGCCTATGGTTT+TGG | + | chr7_3:71845761-71845780 | Msa1121700:CDS | 45.0% |
| TGGCAAAATCTGTGCTAGTC+AGG | + | chr7_3:71845781-71845800 | Msa1121700:CDS | 45.0% | |
| TCTGTGCTAGTCAGGAATGT+TGG | + | chr7_3:71845789-71845808 | Msa1121700:CDS | 45.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | - | chr7_3:71843729-71843748 | None:intergenic | 50.0% | |
| CTCTCAATGGCTATGGCTAG+TGG | + | chr7_3:71843758-71843777 | Msa1121700:exon | 50.0% | |
| TCCCTTTGGTAGAAGCCCTA+CGG | - | chr7_3:71843912-71843931 | None:intergenic | 50.0% | |
| TGGAACCAGTGGTGAATTCC+AGG | + | chr7_3:71843952-71843971 | Msa1121700:CDS | 50.0% | |
| CCATACCTGGAATTCACCAC+TGG | - | chr7_3:71843960-71843979 | None:intergenic | 50.0% | |
| CCAGTGGTGAATTCCAGGTA+TGG | + | chr7_3:71843957-71843976 | Msa1121700:CDS | 50.0% | |
| ! | CGTGTTGATCTACCTAGCTC+TGG | + | chr7_3:71844124-71844143 | Msa1121700:CDS | 50.0% |
| TCCTCCTGATTGTAACCCTG+AGG | + | chr7_3:71844207-71844226 | Msa1121700:CDS | 50.0% | |
| ACCTCAGGGTTACAATCAGG+AGG | - | chr7_3:71844211-71844230 | None:intergenic | 50.0% | |
| ! | GCTGTAGCTCTATAGCCTAG+CGG | + | chr7_3:71844689-71844708 | Msa1121700:intron | 50.0% |
| GCGATTATACTTGCCCTCAG+CGG | + | chr7_3:71844805-71844824 | Msa1121700:intron | 50.0% | |
| TACAAGTATGATCGCAGGGG+TGG | + | chr7_3:71844906-71844925 | Msa1121700:intron | 50.0% | |
| CATAACAGCGGCATACCACT+TGG | - | chr7_3:71845007-71845026 | None:intergenic | 50.0% | |
| TCTCCTCTGTCAAGGGACAA+AGG | + | chr7_3:71845719-71845738 | Msa1121700:CDS | 50.0% | |
| CATCCTTTGTCCCTTGACAG+AGG | - | chr7_3:71845725-71845744 | None:intergenic | 50.0% | |
| ! | TGGTCAGCTACATTGGCCTA+TGG | + | chr7_3:71845755-71845774 | Msa1121700:CDS | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+TGG | - | chr7_3:71843729-71843748 | None:intergenic | 50.0% | |
| CTCTCAATGGCTATGGCTAG+TGG | + | chr7_3:71843758-71843777 | Msa1121700:exon | 50.0% | |
| TCCCTTTGGTAGAAGCCCTA+CGG | - | chr7_3:71843912-71843931 | None:intergenic | 50.0% | |
| TGGAACCAGTGGTGAATTCC+AGG | + | chr7_3:71843952-71843971 | Msa1121700:CDS | 50.0% | |
| CCATACCTGGAATTCACCAC+TGG | - | chr7_3:71843960-71843979 | None:intergenic | 50.0% | |
| CCAGTGGTGAATTCCAGGTA+TGG | + | chr7_3:71843957-71843976 | Msa1121700:CDS | 50.0% | |
| ! | CGTGTTGATCTACCTAGCTC+TGG | + | chr7_3:71844124-71844143 | Msa1121700:CDS | 50.0% |
| TCCTCCTGATTGTAACCCTG+AGG | + | chr7_3:71844207-71844226 | Msa1121700:CDS | 50.0% | |
| ACCTCAGGGTTACAATCAGG+AGG | - | chr7_3:71844211-71844230 | None:intergenic | 50.0% | |
| ! | GCTGTAGCTCTATAGCCTAG+CGG | + | chr7_3:71844689-71844708 | Msa1121700:intron | 50.0% |
| GCGATTATACTTGCCCTCAG+CGG | + | chr7_3:71844805-71844824 | Msa1121700:intron | 50.0% | |
| TACAAGTATGATCGCAGGGG+TGG | + | chr7_3:71844906-71844925 | Msa1121700:intron | 50.0% | |
| CATAACAGCGGCATACCACT+TGG | - | chr7_3:71845007-71845026 | None:intergenic | 50.0% | |
| TCTCCTCTGTCAAGGGACAA+AGG | + | chr7_3:71845719-71845738 | Msa1121700:CDS | 50.0% | |
| CATCCTTTGTCCCTTGACAG+AGG | - | chr7_3:71845725-71845744 | None:intergenic | 50.0% | |
| ! | TGGTCAGCTACATTGGCCTA+TGG | + | chr7_3:71845755-71845774 | Msa1121700:CDS | 50.0% |
| TCCCGTAGGGCTTCTACCAA+AGG | + | chr7_3:71843907-71843926 | Msa1121700:CDS | 55.0% | |
| CCCTTTGGTAGAAGCCCTAC+GGG | - | chr7_3:71843911-71843930 | None:intergenic | 55.0% | |
| CCCGTAGGGCTTCTACCAAA+GGG | + | chr7_3:71843908-71843927 | Msa1121700:CDS | 55.0% | |
| ATGATGTGCTGAGGGCCGTT+TGG | + | chr7_3:71845560-71845579 | Msa1121700:CDS | 55.0% | |
| TCCCGTAGGGCTTCTACCAA+AGG | + | chr7_3:71843907-71843926 | Msa1121700:CDS | 55.0% | |
| CCCTTTGGTAGAAGCCCTAC+GGG | - | chr7_3:71843911-71843930 | None:intergenic | 55.0% | |
| CCCGTAGGGCTTCTACCAAA+GGG | + | chr7_3:71843908-71843927 | Msa1121700:CDS | 55.0% | |
| ATGATGTGCTGAGGGCCGTT+TGG | + | chr7_3:71845560-71845579 | Msa1121700:CDS | 55.0% | |
| AGGGCAAAGGGTCTTCCCGT+AGG | + | chr7_3:71843893-71843912 | Msa1121700:CDS | 60.0% | |
| GGGCAAAGGGTCTTCCCGTA+GGG | + | chr7_3:71843894-71843913 | Msa1121700:CDS | 60.0% | |
| AGGGCAAAGGGTCTTCCCGT+AGG | + | chr7_3:71843893-71843912 | Msa1121700:CDS | 60.0% | |
| GGGCAAAGGGTCTTCCCGTA+GGG | + | chr7_3:71843894-71843913 | Msa1121700:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 71843710 | 71845821 | 71843710 | ID=Msa1121700;Name=Msa1121700 |
| chr7_3 | mRNA | 71843710 | 71845821 | 71843710 | ID=Msa1121700-mRNA-1;Parent=Msa1121700;Name=Msa1121700-mRNA-1;_AED=0.18;_eAED=0.18;_QI=54|0.5|0.33|1|1|1|3|0|213 |
| chr7_3 | exon | 71843710 | 71844228 | 71843710 | ID=Msa1121700-mRNA-1:exon:18498;Parent=Msa1121700-mRNA-1 |
| chr7_3 | exon | 71845544 | 71845581 | 71845544 | ID=Msa1121700-mRNA-1:exon:18499;Parent=Msa1121700-mRNA-1 |
| chr7_3 | exon | 71845683 | 71845821 | 71845683 | ID=Msa1121700-mRNA-1:exon:18500;Parent=Msa1121700-mRNA-1 |
| chr7_3 | five_prime_UTR | 71843710 | 71843763 | 71843710 | ID=Msa1121700-mRNA-1:five_prime_utr;Parent=Msa1121700-mRNA-1 |
| chr7_3 | CDS | 71843764 | 71844228 | 71843764 | ID=Msa1121700-mRNA-1:cds;Parent=Msa1121700-mRNA-1 |
| chr7_3 | CDS | 71845544 | 71845581 | 71845544 | ID=Msa1121700-mRNA-1:cds;Parent=Msa1121700-mRNA-1 |
| chr7_3 | CDS | 71845683 | 71845821 | 71845683 | ID=Msa1121700-mRNA-1:cds;Parent=Msa1121700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
