Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277010 | AES64453.2 | 98.826 | 426 | 4 | 1 | 1 | 426 | 144 | 568 | 0.0 | 863 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277010 | sp|O49639|CDS2_ARATH | 79.196 | 423 | 85 | 2 | 1 | 423 | 1 | 420 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006380 | Msa0277010 | -0.811505 | 6.771239e-51 | -8.615850e-47 |
| Msa0033110 | Msa0277010 | -0.812474 | 4.162537e-51 | -8.615850e-47 |
| Msa0033260 | Msa0277010 | -0.804986 | 1.660144e-49 | -8.615850e-47 |
| Msa0072420 | Msa0277010 | -0.810510 | 1.112302e-50 | -8.615850e-47 |
| Msa0084380 | Msa0277010 | -0.803161 | 3.977238e-49 | -8.615850e-47 |
| Msa0091410 | Msa0277010 | -0.810382 | 1.184916e-50 | -8.615850e-47 |
| Msa0104240 | Msa0277010 | -0.822009 | 2.978286e-53 | -8.615850e-47 |
| Msa0148080 | Msa0277010 | -0.819787 | 9.668505e-53 | -8.615850e-47 |
| Msa0204960 | Msa0277010 | -0.811422 | 7.058882e-51 | -8.615850e-47 |
| Msa0233630 | Msa0277010 | 0.816404 | 5.627963e-52 | -8.615850e-47 |
| Msa0236510 | Msa0277010 | 0.823961 | 1.044932e-53 | -8.615850e-47 |
| Msa0240920 | Msa0277010 | -0.816222 | 6.179716e-52 | -8.615850e-47 |
| Msa0257520 | Msa0277010 | -0.818155 | 2.272021e-52 | -8.615850e-47 |
| Msa0277010 | Msa0317940 | -0.809962 | 1.460039e-50 | -8.615850e-47 |
| Msa0277010 | Msa0318680 | -0.814253 | 1.692909e-51 | -8.615850e-47 |
| Msa0277010 | Msa0326480 | -0.815692 | 8.114426e-52 | -8.615850e-47 |
| Msa0277010 | Msa0417380 | 0.812192 | 4.796892e-51 | -8.615850e-47 |
| Msa0277010 | Msa0454360 | -0.819031 | 1.437571e-52 | -8.615850e-47 |
| Msa0277010 | Msa0455330 | -0.800883 | 1.169297e-48 | -8.615850e-47 |
| Msa0277010 | Msa0610840 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
| Msa0277010 | Msa0707250 | -0.816558 | 5.196960e-52 | -8.615850e-47 |
| Msa0277010 | Msa0858130 | -0.812005 | 5.270825e-51 | -8.615850e-47 |
| Msa0277010 | Msa0919860 | -0.857027 | 2.157921e-62 | -8.615850e-47 |
| Msa0277010 | Msa1021520 | -0.812866 | 3.417099e-51 | -8.615850e-47 |
| Msa0277010 | Msa1029050 | -0.808874 | 2.499683e-50 | -8.615850e-47 |
| Msa0277010 | Msa1109680 | -0.812130 | 4.949021e-51 | -8.615850e-47 |
| Msa0277010 | Msa1121700 | -0.829658 | 4.549954e-55 | -8.615850e-47 |
| Msa0277010 | Msa1125960 | 0.804687 | 1.916491e-49 | -8.615850e-47 |
| Msa0277010 | Msa1181250 | -0.818708 | 1.702058e-52 | -8.615850e-47 |
| Msa0277010 | Msa1181330 | -0.814501 | 1.491675e-51 | -8.615850e-47 |
| Msa0277010 | Msa1181910 | -0.805681 | 1.187081e-49 | -8.615850e-47 |
| Msa0277010 | Msa1246360 | -0.803851 | 2.861874e-49 | -8.615850e-47 |
| Msa0277010 | Msa1254730 | -0.815021 | 1.144137e-51 | -8.615850e-47 |
| Msa0277010 | Msa1316640 | -0.803114 | 4.068853e-49 | -8.615850e-47 |
| Msa0277010 | Msa1340460 | 0.804400 | 2.199608e-49 | -8.615850e-47 |
| Msa0277010 | Msa1346840 | -0.813916 | 2.008345e-51 | -8.615850e-47 |
| Msa0277010 | Msa1347760 | -0.803451 | 3.464982e-49 | -8.615850e-47 |
| Msa0277010 | Msa1419690 | -0.813966 | 1.958885e-51 | -8.615850e-47 |
| Msa0277010 | Msa1435390 | -0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0277010 | Msa1440930 | -0.815594 | 8.533778e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277010 | MtrunA17_Chr2g0289721 | 98.826 | 426 | 4 | 1 | 1 | 426 | 1 | 425 | 0.0 | 862 |
| Msa0277010 | MtrunA17_Chr5g0444871 | 72.554 | 419 | 114 | 1 | 3 | 421 | 2 | 419 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277010 | AT4G22340.3 | 79.196 | 423 | 85 | 2 | 1 | 423 | 25 | 444 | 0.0 | 696 |
| Msa0277010 | AT4G22340.1 | 79.196 | 423 | 85 | 2 | 1 | 423 | 1 | 420 | 0.0 | 694 |
| Msa0277010 | AT1G62430.1 | 75.714 | 420 | 101 | 1 | 4 | 423 | 2 | 420 | 0.0 | 671 |
| Msa0277010 | AT4G22340.2 | 84.254 | 362 | 57 | 0 | 62 | 423 | 1 | 362 | 0.0 | 642 |
| Msa0277010 | AT4G26770.1 | 73.317 | 416 | 109 | 1 | 11 | 424 | 53 | 468 | 0.0 | 630 |
Find 135 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTCTAATTGTTGTATT+TGG | 0.057952 | 2_3:-9350389 | Msa0277010:CDS |
| ACTGCAATGCTATTTGTTTA+TGG | 0.097417 | 2_3:-9350784 | Msa0277010:CDS |
| TATATCTTTGGTTTCTTCTT+TGG | 0.152373 | 2_3:-9349241 | Msa0277010:CDS |
| GACATTGCTGCTTATATCTT+TGG | 0.207295 | 2_3:-9349253 | Msa0277010:CDS |
| TGTTAGAGAGCTACCTTTCT+TGG | 0.226947 | 2_3:+9348937 | None:intergenic |
| TCTTGTCATTAACAAGTAAT+TGG | 0.231200 | 2_3:+9351298 | None:intergenic |
| TGCATTTCGATTCACAATAT+TGG | 0.247173 | 2_3:+9346585 | None:intergenic |
| CTTTGTGTTGATCATCTATA+TGG | 0.260220 | 2_3:-9351220 | Msa0277010:CDS |
| GATTGGGCTCAGGATTTATA+TGG | 0.273712 | 2_3:-9350475 | Msa0277010:intron |
| TATTCGTCCGTTTGGATGAT+TGG | 0.279117 | 2_3:-9351246 | Msa0277010:CDS |
| CATGAAGATAAGCAGCTTCC+TGG | 0.307121 | 2_3:-9351117 | Msa0277010:CDS |
| TTTATACAGGTTTCTTCTTC+CGG | 0.312601 | 2_3:-9349296 | Msa0277010:intron |
| AATATGTTCTCAAAATAAAA+AGG | 0.314784 | 2_3:+9352599 | None:intergenic |
| ATAAGCAGCTTCCTGGATTT+AGG | 0.316744 | 2_3:-9351110 | Msa0277010:CDS |
| ATTCTCTTGCCATGAAGATT+TGG | 0.318817 | 2_3:+9351163 | None:intergenic |
| GCAGAGACAAGGGACAATTT+TGG | 0.320554 | 2_3:-9352822 | Msa0277010:five_prime_UTR |
| AAGATGTACAAGTACCAATT+TGG | 0.321940 | 2_3:-9350431 | Msa0277010:CDS |
| TTGGTGTAACGAGAATTATA+TGG | 0.322410 | 2_3:-9352772 | Msa0277010:five_prime_UTR |
| TGATTCTAATTGTTGTATTT+GGG | 0.333738 | 2_3:-9350388 | Msa0277010:CDS |
| CCCAACAATGAGTAAGATTC+TGG | 0.334181 | 2_3:+9348786 | None:intergenic |
| AACCATCATATCTGCATTCA+TGG | 0.339590 | 2_3:-9349152 | Msa0277010:intron |
| CCATTCGCTTTACTAACTTC+TGG | 0.339983 | 2_3:+9351327 | None:intergenic |
| CAATGGCATGCTTTATGTCT+TGG | 0.345146 | 2_3:-9348134 | Msa0277010:CDS |
| TGTTGTTATCCAAATCTTCA+TGG | 0.345481 | 2_3:-9351172 | Msa0277010:CDS |
| TTCGTGCTTATTCGTCCGTT+TGG | 0.346714 | 2_3:-9351254 | Msa0277010:CDS |
| AAGCTCTGTATCGGAGGCTT+GGG | 0.350396 | 2_3:-9347054 | Msa0277010:CDS |
| TCCAAGCATACTGTCCAAAT+TGG | 0.356580 | 2_3:+9350417 | None:intergenic |
| TTTGTCAGTTGAGATGATTT+TGG | 0.357748 | 2_3:-9347202 | Msa0277010:CDS |
| TGTTGGGATGGACTCCTCAC+TGG | 0.369252 | 2_3:-9348770 | Msa0277010:CDS |
| GCTTCAATTATTGCACCTTT+CGG | 0.369719 | 2_3:-9348104 | Msa0277010:CDS |
| CTGGATTTAGGCTATTGAAT+TGG | 0.377416 | 2_3:-9351098 | Msa0277010:intron |
| TGCTACTCCCTGTACATTAC+AGG | 0.379155 | 2_3:-9350667 | Msa0277010:intron |
| GGTTGGCTTGACTGTGATCC+TGG | 0.379518 | 2_3:-9348822 | Msa0277010:CDS |
| TTGGAGATAGTTTAATCAAT+GGG | 0.389619 | 2_3:+9349212 | None:intergenic |
| AATGCAGGCTGTCACGGGTT+TGG | 0.389873 | 2_3:-9346568 | Msa0277010:three_prime_UTR |
| AACTATCTCCAAAGAAAACT+TGG | 0.399939 | 2_3:-9349201 | Msa0277010:CDS |
| GCCAGAATCTTACTCATTGT+TGG | 0.400503 | 2_3:-9348787 | Msa0277010:CDS |
| ATTCGTCCGTTTGGATGATT+GGG | 0.414551 | 2_3:-9351245 | Msa0277010:CDS |
| GCTGCGAGAGCGGTTGGCGG+CGG | 0.415610 | 2_3:+9352485 | None:intergenic |
| TAAATGCAGGATTTGTCAAC+TGG | 0.419677 | 2_3:-9348843 | Msa0277010:intron |
| TGGTGTAACGAGAATTATAT+GGG | 0.423676 | 2_3:-9352771 | Msa0277010:five_prime_UTR |
| TGTCCTTGTGTAGATGGTTA+TGG | 0.424136 | 2_3:-9347271 | Msa0277010:intron |
| CCTACTTCTACTTCTTCCTC+AGG | 0.434781 | 2_3:-9352230 | Msa0277010:CDS |
| GTTGTCTTGTGCAGTTTCCT+TGG | 0.435920 | 2_3:-9348181 | Msa0277010:intron |
| CCAGAATCTTACTCATTGTT+GGG | 0.435970 | 2_3:-9348786 | Msa0277010:CDS |
| ATTGATGAGCCTGTCATTTG+AGG | 0.440667 | 2_3:-9347083 | Msa0277010:CDS |
| GAAGCTCTGTATCGGAGGCT+TGG | 0.444577 | 2_3:-9347055 | Msa0277010:CDS |
| TCTTTGCAAGTGGTTTCAAA+AGG | 0.445299 | 2_3:-9348076 | Msa0277010:CDS |
| CGTTCTTCTTGAGCTGCCAT+TGG | 0.445478 | 2_3:+9346737 | None:intergenic |
| TTAATGACAATAAGCGTTGC+CGG | 0.445674 | 2_3:+9349277 | None:intergenic |
| ACCAATTTGGACAGTATGCT+TGG | 0.449591 | 2_3:-9350418 | Msa0277010:CDS |
| TTTGTAGCTTGCTAACATCA+TGG | 0.450221 | 2_3:-9348983 | Msa0277010:intron |
| TTTGGAGATAGTTTAATCAA+TGG | 0.462574 | 2_3:+9349211 | None:intergenic |
| ATCTCAACTGACAAACTTTG+CGG | 0.463458 | 2_3:+9347210 | None:intergenic |
| CACCGTTACCTGTAATGTAC+AGG | 0.471485 | 2_3:+9350659 | None:intergenic |
| CATAAAGCATGCCATTGAAC+TGG | 0.478002 | 2_3:+9348140 | None:intergenic |
| AATCGAAATGCAGGCTGTCA+CGG | 0.478139 | 2_3:-9346574 | Msa0277010:three_prime_UTR |
| TTGTAGCTTGCTAACATCAT+GGG | 0.487736 | 2_3:-9348982 | Msa0277010:intron |
| CTTCTTGTTCCTCAAATGAC+AGG | 0.501021 | 2_3:+9347074 | None:intergenic |
| CAGTCTTATAAAGTATCATA+TGG | 0.501171 | 2_3:-9350695 | Msa0277010:CDS |
| CACAAATATCATTATTGTGA+GGG | 0.502731 | 2_3:+9352653 | None:intergenic |
| ATACCTGAGTGAAGTGGAAG+TGG | 0.503141 | 2_3:+9352461 | None:intergenic |
| CTTTGCAAGTGGTTTCAAAA+GGG | 0.503734 | 2_3:-9348075 | Msa0277010:CDS |
| TCAGTAAGTCCACCATGTCC+TGG | 0.503899 | 2_3:+9347908 | None:intergenic |
| AGTGGAGCTGCGAGAGCGGT+TGG | 0.506694 | 2_3:+9352479 | None:intergenic |
| TATCTATCCTACCAGTTCAA+TGG | 0.508200 | 2_3:-9348151 | Msa0277010:CDS |
| GGAGCTGCGAGAGCGGTTGG+CGG | 0.510265 | 2_3:+9352482 | None:intergenic |
| AATGCTTGGCACGGTGAAAG+AGG | 0.511178 | 2_3:+9350361 | None:intergenic |
| TGCAGGATTTGTCAACTGGT+TGG | 0.512807 | 2_3:-9348839 | Msa0277010:intron |
| TCTGCACCCACTATCGAAGT+TGG | 0.514774 | 2_3:+9352840 | None:intergenic |
| TTTGTGTTGATCATCTATAT+GGG | 0.517084 | 2_3:-9351219 | Msa0277010:CDS |
| ATCGAAATGCAGGCTGTCAC+GGG | 0.521219 | 2_3:-9346573 | Msa0277010:three_prime_UTR |
| TACTGACAGAATGGACTGCC+AGG | 0.523591 | 2_3:-9347891 | Msa0277010:intron |
| ACTTCTTCCTCAGGAGGAGG+AGG | 0.524410 | 2_3:-9352221 | Msa0277010:CDS |
| GTTAGTAAAGCGAATGGCAG+CGG | 0.528015 | 2_3:-9351321 | Msa0277010:CDS |
| AAGCCGATATAAAACCTTGT+CGG | 0.529243 | 2_3:+9350723 | None:intergenic |
| AATCTTACTCATTGTTGGGA+TGG | 0.530062 | 2_3:-9348782 | Msa0277010:CDS |
| ACGTATTCTGAGTCAACGTC+TGG | 0.532335 | 2_3:-9350761 | Msa0277010:CDS |
| TTCGGAGGTTTCTTTGCAAG+TGG | 0.535033 | 2_3:-9348086 | Msa0277010:CDS |
| CGATAGTGGGTGCAGAGACA+AGG | 0.538490 | 2_3:-9352833 | Msa0277010:five_prime_UTR |
| GGCGATAGTATTCCAGGACA+TGG | 0.545008 | 2_3:-9347920 | Msa0277010:CDS |
| CAGGAGGAGGAGGACGAAGT+AGG | 0.545936 | 2_3:-9352211 | Msa0277010:CDS |
| GTGCGCTGTTTATTCAGTTG+AGG | 0.546707 | 2_3:-9352633 | Msa0277010:five_prime_UTR |
| TTTAATATTCAAATAGCCAA+TGG | 0.548477 | 2_3:-9346753 | Msa0277010:three_prime_UTR |
| CACCATGAATGCAGATATGA+TGG | 0.549029 | 2_3:+9349150 | None:intergenic |
| TCTACTTCTTCCTCAGGAGG+AGG | 0.551269 | 2_3:-9352224 | Msa0277010:CDS |
| TGGTGGACTTACTGACAGAA+TGG | 0.551941 | 2_3:-9347900 | Msa0277010:CDS |
| AAGAAGAATAATAAGCCAAA+CGG | 0.553293 | 2_3:+9352557 | None:intergenic |
| GTGGCTGACATGTCCAAGAA+AGG | 0.556048 | 2_3:-9348950 | Msa0277010:intron |
| CCTGAGGAAGAAGTAGAAGT+AGG | 0.558221 | 2_3:+9352230 | None:intergenic |
| TGATTCAAGAGCTATGCAAA+AGG | 0.558951 | 2_3:-9352261 | Msa0277010:exon |
| TCAATTATTGCACCTTTCGG+AGG | 0.561762 | 2_3:-9348101 | Msa0277010:CDS |
| AGGAACAAGAAGCTCTGTAT+CGG | 0.565483 | 2_3:-9347063 | Msa0277010:CDS |
| GATTTGGATAACAACAATCA+TGG | 0.567126 | 2_3:+9351179 | None:intergenic |
| AAAGCTCCCAATCATCCAAA+CGG | 0.576010 | 2_3:+9351239 | None:intergenic |
| CAATTCAATAGCCTAAATCC+AGG | 0.576241 | 2_3:+9351099 | None:intergenic |
| GTTGGGATGGACTCCTCACT+GGG | 0.577627 | 2_3:-9348769 | Msa0277010:intron |
| TCTCCAAAGAAAACTTGGGA+GGG | 0.578292 | 2_3:-9349196 | Msa0277010:CDS |
| ACTATCTCCAAAGAAAACTT+GGG | 0.580605 | 2_3:-9349200 | Msa0277010:CDS |
| ACAAGATTTATTGTTTATTG+CGG | 0.587773 | 2_3:+9346629 | None:intergenic |
| AATATTGTGAATCGAAATGC+AGG | 0.589588 | 2_3:-9346583 | Msa0277010:three_prime_UTR |
| AAATGTTAATACTCCCCTCA+AGG | 0.590057 | 2_3:+9346695 | None:intergenic |
| ACTTCTACTTCTTCCTCAGG+AGG | 0.590407 | 2_3:-9352227 | Msa0277010:CDS |
| AGGATAGATATCTCTTTCCA+AGG | 0.593861 | 2_3:+9348164 | None:intergenic |
| CGAATAAGCACGAATTAACA+TGG | 0.598627 | 2_3:+9351263 | None:intergenic |
| ATCTCCAAAGAAAACTTGGG+AGG | 0.599776 | 2_3:-9349197 | Msa0277010:CDS |
| AAAAGATATTGAGTGAGCAA+TGG | 0.601592 | 2_3:+9346773 | None:intergenic |
| TGGAAGTGGAGCTGCGAGAG+CGG | 0.601713 | 2_3:+9352475 | None:intergenic |
| GCTTATCTTCATGAGTTCGA+CGG | 0.604190 | 2_3:+9351127 | None:intergenic |
| GCACCGAAAACGTTCTAATG+AGG | 0.610668 | 2_3:-9352189 | Msa0277010:intron |
| CCAGAAGTTAGTAAAGCGAA+TGG | 0.611642 | 2_3:-9351327 | Msa0277010:CDS |
| CTTGGGGAAGTGTTGCAACA+AGG | 0.612340 | 2_3:-9347037 | Msa0277010:CDS |
| AAGCATGCCATTGAACTGGT+AGG | 0.615182 | 2_3:+9348144 | None:intergenic |
| ACTTCGTCCTCCTCCTCCTG+AGG | 0.616235 | 2_3:+9352214 | None:intergenic |
| CGGTTGGCGGCGGAAGAAGA+CGG | 0.618626 | 2_3:+9352495 | None:intergenic |
| GCACAAATATCATTATTGTG+AGG | 0.619153 | 2_3:+9352652 | None:intergenic |
| GTTGTCTTAGATCCGTTGCA+AGG | 0.620113 | 2_3:-9347005 | Msa0277010:intron |
| CAATCATGGCAGTAATGTAG+AGG | 0.624248 | 2_3:+9351193 | None:intergenic |
| TCTGGCTTAAACAGAAAACC+AGG | 0.630795 | 2_3:+9348804 | None:intergenic |
| AACAAGAAGCTCTGTATCGG+AGG | 0.631191 | 2_3:-9347060 | Msa0277010:CDS |
| GCGGCACAACAAATGACTGA+TGG | 0.637584 | 2_3:+9347229 | None:intergenic |
| AGCTCTGTATCGGAGGCTTG+GGG | 0.646302 | 2_3:-9347053 | Msa0277010:CDS |
| GATAGTGGGTGCAGAGACAA+GGG | 0.648523 | 2_3:-9352832 | Msa0277010:five_prime_UTR |
| TGGAGATAGTTTAATCAATG+GGG | 0.649472 | 2_3:+9349213 | None:intergenic |
| GCTCCACTTCCACTTCACTC+AGG | 0.656516 | 2_3:-9352464 | Msa0277010:intron |
| ACATCATGGGTCGTTCTCAG+TGG | 0.660216 | 2_3:-9348969 | Msa0277010:CDS |
| ACCGTTACCTGTAATGTACA+GGG | 0.665629 | 2_3:+9350660 | None:intergenic |
| AGGACAAATACACCTTGCAA+CGG | 0.666313 | 2_3:+9346993 | None:intergenic |
| TAACACAGTAAATTCCGACA+AGG | 0.668253 | 2_3:-9350737 | Msa0277010:CDS |
| TGTCAAGTGCTTACCCAGTG+AGG | 0.669294 | 2_3:+9348756 | None:intergenic |
| GGTGTAACGAGAATTATATG+GGG | 0.673964 | 2_3:-9352770 | Msa0277010:five_prime_UTR |
| AAGAATAATAAGCCAAACGG+CGG | 0.695232 | 2_3:+9352560 | None:intergenic |
| CTTGCAAAGAAACCTCCGAA+AGG | 0.699905 | 2_3:+9348089 | None:intergenic |
| GATAGTATTCCAGGACATGG+TGG | 0.722216 | 2_3:-9347917 | Msa0277010:CDS |
| TTGGCGGCGGAAGAAGACGG+AGG | 0.728676 | 2_3:+9352498 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAAAATTTAAGTTAATTT+TGG | - | chr2_3:9346616-9346635 | Msa0277010:three_prime_UTR | 10.0% |
| !!! | TTTAGGAAAAAATTATATTT+TGG | - | chr2_3:9347739-9347758 | Msa0277010:intron | 10.0% |
| !!! | TTAGGAAAAAATTATATTTT+GGG | - | chr2_3:9347740-9347759 | Msa0277010:intron | 10.0% |
| !! | ATTAATAAGTAAAATGATTT+AGG | - | chr2_3:9347825-9347844 | Msa0277010:intron | 10.0% |
| !!! | TAGAAATAATATTTTGTTAG+AGG | - | chr2_3:9346666-9346685 | Msa0277010:three_prime_UTR | 15.0% |
| !! | ACAAACTAAAAAATAAAGAA+AGG | - | chr2_3:9346728-9346747 | Msa0277010:three_prime_UTR | 15.0% |
| !! | AATATGTTCTCAAAATAAAA+AGG | + | chr2_3:9346811-9346830 | None:intergenic | 15.0% |
| !! | AAATGAAGAGATTAATTAAT+TGG | + | chr2_3:9347018-9347037 | None:intergenic | 15.0% |
| !!! | TTTTATTCTCTATTTGATTT+TGG | - | chr2_3:9347037-9347056 | Msa0277010:CDS | 15.0% |
| !!! | TAAGAATAAATATAGGTTTT+AGG | - | chr2_3:9347420-9347439 | Msa0277010:intron | 15.0% |
| !!! | AAGAATAAATATAGGTTTTA+GGG | - | chr2_3:9347421-9347440 | Msa0277010:intron | 15.0% |
| !!! | ACAAATGATAAAAAGTATAA+GGG | + | chr2_3:9347650-9347669 | None:intergenic | 15.0% |
| !!! | TACAAATGATAAAAAGTATA+AGG | + | chr2_3:9347651-9347670 | None:intergenic | 15.0% |
| !!! | TAGGAAAAAATTATATTTTG+GGG | - | chr2_3:9347741-9347760 | Msa0277010:intron | 15.0% |
| !! | ATCAAAATTGTATCAATATA+CGG | - | chr2_3:9347997-9348016 | Msa0277010:intron | 15.0% |
| !!! | TAACTTGTTAATGTTTTAAT+TGG | - | chr2_3:9348572-9348591 | Msa0277010:intron | 15.0% |
| !!! | AATTTGGTTTCTATTTTTTT+AGG | - | chr2_3:9348840-9348859 | Msa0277010:intron | 15.0% |
| !!! | TAATCTTTTTTCCTATTTTA+AGG | + | chr2_3:9349365-9349384 | None:intergenic | 15.0% |
| !! | TTAAAATAGGAAAAAAGATT+AGG | - | chr2_3:9349364-9349383 | Msa0277010:intron | 15.0% |
| !! | TAAAATAGGAAAAAAGATTA+GGG | - | chr2_3:9349365-9349384 | Msa0277010:intron | 15.0% |
| !! | AAAATATGATGAAACATTAA+AGG | - | chr2_3:9351749-9351768 | Msa0277010:intron | 15.0% |
| !! | AAATATGATGAAACATTAAA+GGG | - | chr2_3:9351750-9351769 | Msa0277010:intron | 15.0% |
| !!! | ATTTTTGTAAATAAAATACC+TGG | + | chr2_3:9352232-9352251 | None:intergenic | 15.0% |
| !! | TTTGAAAAATGTTGTATTTA+TGG | - | chr2_3:9352278-9352297 | Msa0277010:five_prime_UTR | 15.0% |
| !!! | TAGTTTGTTTATTTTTCTAC+AGG | + | chr2_3:9346716-9346735 | None:intergenic | 20.0% |
| !! | AAAAAATCGCTATATAAACA+TGG | + | chr2_3:9348498-9348517 | None:intergenic | 20.0% |
| !!! | ATGTTTATATAGCGATTTTT+TGG | - | chr2_3:9348497-9348516 | Msa0277010:intron | 20.0% |
| !!! | TATTTTTATTCTAAATCGGA+TGG | + | chr2_3:9348540-9348559 | None:intergenic | 20.0% |
| !!! | TTTTGTTGTTTTAATGTTCA+TGG | - | chr2_3:9348779-9348798 | Msa0277010:CDS | 20.0% |
| !!! | TTTGTTGTTTTAATGTTCAT+GGG | - | chr2_3:9348780-9348799 | Msa0277010:CDS | 20.0% |
| !! | ATGATTCTAATTGTTGTATT+TGG | - | chr2_3:9349018-9349037 | Msa0277010:intron | 20.0% |
| !! | TGATTCTAATTGTTGTATTT+GGG | - | chr2_3:9349019-9349038 | Msa0277010:intron | 20.0% |
| !! | CTGGTAATTTAATCAATAAA+AGG | - | chr2_3:9349083-9349102 | Msa0277010:intron | 20.0% |
| !! | GGTTAAGTAAATTTCATATT+TGG | - | chr2_3:9349273-9349292 | Msa0277010:CDS | 20.0% |
| !! | TTTATGCTTATGAATGTAAT+CGG | + | chr2_3:9349594-9349613 | None:intergenic | 20.0% |
| !! | AAATTTAAAAGTAAATTGGG+AGG | + | chr2_3:9349871-9349890 | None:intergenic | 20.0% |
| !! | TACAAGCAAGAAAATAATTT+AGG | + | chr2_3:9349927-9349946 | None:intergenic | 20.0% |
| !! | TTAATTCAAATAAAACGCAA+TGG | + | chr2_3:9350070-9350089 | None:intergenic | 20.0% |
| !! | TATAAAAAAATCAGTGAAAC+AGG | + | chr2_3:9350097-9350116 | None:intergenic | 20.0% |
| !!! | TTTCACTGATTTTTTTATAC+AGG | - | chr2_3:9350098-9350117 | Msa0277010:intron | 20.0% |
| !!! | ATAAATTATCTGGTGAATTT+TGG | + | chr2_3:9350748-9350767 | None:intergenic | 20.0% |
| !! | GTAAATATGGATAAATTATC+TGG | + | chr2_3:9350758-9350777 | None:intergenic | 20.0% |
| !!! | AAATGTGTTATTGGTAAATA+TGG | + | chr2_3:9350771-9350790 | None:intergenic | 20.0% |
| !!! | TATTTACCAATAACACATTT+TGG | - | chr2_3:9350771-9350790 | Msa0277010:CDS | 20.0% |
| !! | ACTTGAAAAACATATAGAAT+TGG | - | chr2_3:9350838-9350857 | Msa0277010:intron | 20.0% |
| !! | TTGAGCTTATAATATATGTA+TGG | - | chr2_3:9351130-9351149 | Msa0277010:CDS | 20.0% |
| !! | GATTCTTTCTAATATAGTTT+AGG | + | chr2_3:9351615-9351634 | None:intergenic | 20.0% |
| !!! | TTTTTTTACAACTTTCTTTG+GGG | + | chr2_3:9351702-9351721 | None:intergenic | 20.0% |
| !!! | CTTTTTTTACAACTTTCTTT+GGG | + | chr2_3:9351703-9351722 | None:intergenic | 20.0% |
| !! | AATATGATGAAACATTAAAG+GGG | - | chr2_3:9351751-9351770 | Msa0277010:intron | 20.0% |
| !! | ACACTAAATATACAAATAGA+AGG | - | chr2_3:9351781-9351800 | Msa0277010:intron | 20.0% |
| !! | CACTAAATATACAAATAGAA+GGG | - | chr2_3:9351782-9351801 | Msa0277010:intron | 20.0% |
| !! | AAAGATATGCTAATAAAATG+TGG | - | chr2_3:9351897-9351916 | Msa0277010:intron | 20.0% |
| !!! | TTTTCAGTTCATTATAAGTA+TGG | - | chr2_3:9352046-9352065 | Msa0277010:intron | 20.0% |
| !! | TTTCAGTTCATTATAAGTAT+GGG | - | chr2_3:9352047-9352066 | Msa0277010:intron | 20.0% |
| !! | AAATGAAAGAATCAAATAGA+AGG | + | chr2_3:9352444-9352463 | None:intergenic | 20.0% |
| !! | ATTTGATTCTTTCATTTACA+AGG | - | chr2_3:9352447-9352466 | Msa0277010:intron | 20.0% |
| !! | TTTGATTCTTTCATTTACAA+GGG | - | chr2_3:9352448-9352467 | Msa0277010:intron | 20.0% |
| !!! | AACATAATGGGATATTTTAA+CGG | + | chr2_3:9352565-9352584 | None:intergenic | 20.0% |
| !!! | CTTCTTGAATTTTTTATTGA+TGG | - | chr2_3:9352597-9352616 | Msa0277010:five_prime_UTR | 20.0% |
| !! | TTTAATATTCAAATAGCCAA+TGG | - | chr2_3:9352654-9352673 | Msa0277010:five_prime_UTR | 20.0% |
| !! | ACAAGATTTATTGTTTATTG+CGG | + | chr2_3:9352781-9352800 | None:intergenic | 20.0% |
| ! | CACAAATATCATTATTGTGA+GGG | + | chr2_3:9346757-9346776 | None:intergenic | 25.0% |
| ! | AAGAAGAATAATAAGCCAAA+CGG | + | chr2_3:9346853-9346872 | None:intergenic | 25.0% |
| ! | TTTGTCAAATGTGTCTAAAT+AGG | - | chr2_3:9347354-9347373 | Msa0277010:intron | 25.0% |
| ! | TTGTCAAATGTGTCTAAATA+GGG | - | chr2_3:9347355-9347374 | Msa0277010:intron | 25.0% |
| !!! | AAGTGTGTTATTGTGATTTT+AGG | - | chr2_3:9347722-9347741 | Msa0277010:intron | 25.0% |
| !! | TAACTTGGGTGTATTTTATA+TGG | + | chr2_3:9347934-9347953 | None:intergenic | 25.0% |
| !! | ATCAATGCAAAGTTTAACTT+GGG | + | chr2_3:9347948-9347967 | None:intergenic | 25.0% |
| ! | TTTCTGAATGTCTTTATATC+AGG | - | chr2_3:9348052-9348071 | Msa0277010:intron | 25.0% |
| ! | TCTTGTCATTAACAAGTAAT+TGG | + | chr2_3:9348112-9348131 | None:intergenic | 25.0% |
| !! | TTTGTGTTGATCATCTATAT+GGG | - | chr2_3:9348188-9348207 | Msa0277010:intron | 25.0% |
| ! | TAATAAATTGCCTTGATGAA+GGG | + | chr2_3:9348356-9348375 | None:intergenic | 25.0% |
| ! | ATAATAAATTGCCTTGATGA+AGG | + | chr2_3:9348357-9348376 | None:intergenic | 25.0% |
| ! | ACATCTATTATATCTGTCAT+AGG | - | chr2_3:9348463-9348482 | Msa0277010:intron | 25.0% |
| ! | CATCTATTATATCTGTCATA+GGG | - | chr2_3:9348464-9348483 | Msa0277010:intron | 25.0% |
| !! | CAGTCTTATAAAGTATCATA+TGG | - | chr2_3:9348712-9348731 | Msa0277010:intron | 25.0% |
| !!! | GATTATTTTACACCATTGTA+AGG | - | chr2_3:9348877-9348896 | Msa0277010:intron | 25.0% |
| !! | AAATGGTTAAGAAGTTTTCT+GGG | + | chr2_3:9349134-9349153 | None:intergenic | 25.0% |
| ! | ATAATATCAAGCAATGCAAA+TGG | + | chr2_3:9349151-9349170 | None:intergenic | 25.0% |
| ! | TTGCTTGATATTATACTTTG+TGG | - | chr2_3:9349157-9349176 | Msa0277010:CDS | 25.0% |
| ! | AACTGAAAAAGTTGTTTACA+TGG | + | chr2_3:9349196-9349215 | None:intergenic | 25.0% |
| !!! | ATCCTATTTTACAGCTTTAT+GGG | + | chr2_3:9349472-9349491 | None:intergenic | 25.0% |
| !! | AATCCTATTTTACAGCTTTA+TGG | + | chr2_3:9349473-9349492 | None:intergenic | 25.0% |
| ! | TGAATCAAATAGTCTTCAAT+TGG | - | chr2_3:9349557-9349576 | Msa0277010:intron | 25.0% |
| ! | ACATTCATAAGCATAAACTA+AGG | - | chr2_3:9349597-9349616 | Msa0277010:intron | 25.0% |
| ! | AGCAATCAAACAAATGAAAT+GGG | - | chr2_3:9349630-9349649 | Msa0277010:intron | 25.0% |
| ! | AAGAATTGATCTCAGTATAT+TGG | - | chr2_3:9349741-9349760 | Msa0277010:intron | 25.0% |
| ! | TACACAATCACTTTAAATCT+TGG | + | chr2_3:9349969-9349988 | None:intergenic | 25.0% |
| ! | ATGACTAAGTTATTCTAATG+AGG | + | chr2_3:9350006-9350025 | None:intergenic | 25.0% |
| !! | TATATCTTTGGTTTCTTCTT+TGG | - | chr2_3:9350166-9350185 | Msa0277010:intron | 25.0% |
| ! | TTGGAGATAGTTTAATCAAT+GGG | + | chr2_3:9350198-9350217 | None:intergenic | 25.0% |
| ! | TTTGGAGATAGTTTAATCAA+TGG | + | chr2_3:9350199-9350218 | None:intergenic | 25.0% |
| ! | AGAATTGGAATGTATCTAAT+CGG | - | chr2_3:9350853-9350872 | Msa0277010:intron | 25.0% |
| ! | AGAATTGAACTTAGAATGAA+TGG | + | chr2_3:9351013-9351032 | None:intergenic | 25.0% |
| ! | AGATAGAATTACCATTAGAA+AGG | - | chr2_3:9351034-9351053 | Msa0277010:intron | 25.0% |
| ! | TCATATCTTGATCAGAAAAA+TGG | + | chr2_3:9351389-9351408 | None:intergenic | 25.0% |
| ! | GAGGTATAAATAGATTTGAT+GGG | - | chr2_3:9351440-9351459 | Msa0277010:intron | 25.0% |
| ! | TCTACAAACTTATTCTAAGT+TGG | - | chr2_3:9351558-9351577 | Msa0277010:intron | 25.0% |
| !!! | TTTTTTACAACTTTCTTTGG+GGG | + | chr2_3:9351701-9351720 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTACAACTTTCTT+TGG | + | chr2_3:9351704-9351723 | None:intergenic | 25.0% |
| ! | CCAAAGAAAGTTGTAAAAAA+AGG | - | chr2_3:9351701-9351720 | Msa0277010:intron | 25.0% |
| ! | TTGTAAAAAAAGGAGATAGA+AGG | - | chr2_3:9351711-9351730 | Msa0277010:intron | 25.0% |
| !!! | TTCATCATATTTTTTCTCCT+TGG | + | chr2_3:9351742-9351761 | None:intergenic | 25.0% |
| ! | CTTACTGAAAATATCTTCAA+TGG | - | chr2_3:9351869-9351888 | Msa0277010:intron | 25.0% |
| ! | AACTAAAGGACAAATAGTAA+AGG | + | chr2_3:9352025-9352044 | None:intergenic | 25.0% |
| ! | AATGAACTGAAAAGAACTAA+AGG | + | chr2_3:9352039-9352058 | None:intergenic | 25.0% |
| ! | TTCAGTTCATTATAAGTATG+GGG | - | chr2_3:9352048-9352067 | Msa0277010:intron | 25.0% |
| TTGGTGTAACGAGAATTATA+TGG | - | chr2_3:9346635-9346654 | Msa0277010:three_prime_UTR | 30.0% | |
| TGGTGTAACGAGAATTATAT+GGG | - | chr2_3:9346636-9346655 | Msa0277010:three_prime_UTR | 30.0% | |
| GCACAAATATCATTATTGTG+AGG | + | chr2_3:9346758-9346777 | None:intergenic | 30.0% | |
| CTAAATAGGGAAAACATGAT+TGG | - | chr2_3:9347368-9347387 | Msa0277010:intron | 30.0% | |
| ATGATTGGAATTTGGAAGAA+AGG | - | chr2_3:9347383-9347402 | Msa0277010:intron | 30.0% | |
| !! | TTTTAGGGACTGTTTCAATT+AGG | - | chr2_3:9347436-9347455 | Msa0277010:intron | 30.0% |
| TTACTTATTAATTCCACGTC+TGG | + | chr2_3:9347817-9347836 | None:intergenic | 30.0% | |
| GAATTTCTGCAATAACTGTT+TGG | - | chr2_3:9347852-9347871 | Msa0277010:intron | 30.0% | |
| GATCAATGCAAAGTTTAACT+TGG | + | chr2_3:9347949-9347968 | None:intergenic | 30.0% | |
| ATTGTATCAATATACGGTGA+CGG | - | chr2_3:9348003-9348022 | Msa0277010:intron | 30.0% | |
| ! | CTTTGTGTTGATCATCTATA+TGG | - | chr2_3:9348187-9348206 | Msa0277010:intron | 30.0% |
| GATTTGGATAACAACAATCA+TGG | + | chr2_3:9348231-9348250 | None:intergenic | 30.0% | |
| TGTTGTTATCCAAATCTTCA+TGG | - | chr2_3:9348235-9348254 | Msa0277010:intron | 30.0% | |
| GACAGATATAATAGATGTCA+CGG | + | chr2_3:9348461-9348480 | None:intergenic | 30.0% | |
| ! | TTTTATTCTAAATCGGATGG+TGG | + | chr2_3:9348537-9348556 | None:intergenic | 30.0% |
| ! | ACTGCAATGCTATTTGTTTA+TGG | - | chr2_3:9348623-9348642 | Msa0277010:intron | 30.0% |
| !! | ATTCCGACAAGGTTTTATAT+CGG | - | chr2_3:9348681-9348700 | Msa0277010:intron | 30.0% |
| AAATAGAAACCAAATTTGCC+AGG | + | chr2_3:9348836-9348855 | None:intergenic | 30.0% | |
| AAGTATAAGAGTCCTTACAA+TGG | + | chr2_3:9348892-9348911 | None:intergenic | 30.0% | |
| ! | TTGTCTTCCCTTTTATTGAT+TGG | - | chr2_3:9348915-9348934 | Msa0277010:intron | 30.0% |
| !! | TGTCTTCCCTTTTATTGATT+GGG | - | chr2_3:9348916-9348935 | Msa0277010:intron | 30.0% |
| AAGATGTACAAGTACCAATT+TGG | - | chr2_3:9348976-9348995 | Msa0277010:CDS | 30.0% | |
| AAAATCCCTTCAAAAATGCT+TGG | + | chr2_3:9349063-9349082 | None:intergenic | 30.0% | |
| ! | CAAATGGTTAAGAAGTTTTC+TGG | + | chr2_3:9349135-9349154 | None:intergenic | 30.0% |
| AAAAGTTGTTTACATGGATC+AGG | + | chr2_3:9349190-9349209 | None:intergenic | 30.0% | |
| TTTCAGTTAGATTGACTGAA+TGG | - | chr2_3:9349208-9349227 | Msa0277010:CDS | 30.0% | |
| ATCCATAATAATCACCTGAA+AGG | - | chr2_3:9349248-9349267 | Msa0277010:CDS | 30.0% | |
| ! | ATCCTTTCAGGTGATTATTA+TGG | + | chr2_3:9349253-9349272 | None:intergenic | 30.0% |
| ATAATAATCACCTGAAAGGA+TGG | - | chr2_3:9349252-9349271 | Msa0277010:CDS | 30.0% | |
| ATTTACTTAACCATCCTTTC+AGG | + | chr2_3:9349265-9349284 | None:intergenic | 30.0% | |
| AGGAAAAATTTCTACTGCAT+GGG | - | chr2_3:9349399-9349418 | Msa0277010:intron | 30.0% | |
| ! | ATGAGGAGAGTATAATTACT+TGG | + | chr2_3:9349431-9349450 | None:intergenic | 30.0% |
| AAGTAATTATACTCTCCTCA+TGG | - | chr2_3:9349430-9349449 | Msa0277010:intron | 30.0% | |
| AACCCATAAAGCTGTAAAAT+AGG | - | chr2_3:9349467-9349486 | Msa0277010:intron | 30.0% | |
| !! | AGCATAAACTAAGGTATTGA+TGG | - | chr2_3:9349606-9349625 | Msa0277010:intron | 30.0% |
| !! | GCATAAACTAAGGTATTGAT+GGG | - | chr2_3:9349607-9349626 | Msa0277010:intron | 30.0% |
| GAGCAATCAAACAAATGAAA+TGG | - | chr2_3:9349629-9349648 | Msa0277010:intron | 30.0% | |
| TAAATGTCTGTCCGTTTAAA+TGG | - | chr2_3:9349774-9349793 | Msa0277010:intron | 30.0% | |
| AGGCAGTATATCCATTTAAA+CGG | + | chr2_3:9349788-9349807 | None:intergenic | 30.0% | |
| TTTATACAGGTTTCTTCTTC+CGG | - | chr2_3:9350111-9350130 | Msa0277010:intron | 30.0% | |
| TGGAGATAGTTTAATCAATG+GGG | + | chr2_3:9350197-9350216 | None:intergenic | 30.0% | |
| AACTATCTCCAAAGAAAACT+TGG | - | chr2_3:9350206-9350225 | Msa0277010:intron | 30.0% | |
| ACTATCTCCAAAGAAAACTT+GGG | - | chr2_3:9350207-9350226 | Msa0277010:intron | 30.0% | |
| CTAACACATCACATATTAAC+AGG | - | chr2_3:9350487-9350506 | Msa0277010:intron | 30.0% | |
| TTTGCAGTGTATGATTATGT+GGG | - | chr2_3:9350714-9350733 | Msa0277010:CDS | 30.0% | |
| AGGTATCCAAAATGTGTTAT+TGG | + | chr2_3:9350780-9350799 | None:intergenic | 30.0% | |
| GAATTGGAATGTATCTAATC+GGG | - | chr2_3:9350854-9350873 | Msa0277010:intron | 30.0% | |
| ! | TTTTGACCAAGTCAATGATA+CGG | + | chr2_3:9350960-9350979 | None:intergenic | 30.0% |
| AATGAATGGTTCAGATTTGA+TGG | + | chr2_3:9350999-9351018 | None:intergenic | 30.0% | |
| CTATGTTGATACCTTTCTAA+TGG | + | chr2_3:9351048-9351067 | None:intergenic | 30.0% | |
| !! | CATTAGAAAGGTATCAACAT+AGG | - | chr2_3:9351046-9351065 | Msa0277010:intron | 30.0% |
| ATAGAACGTTAAACATTCAG+TGG | + | chr2_3:9351097-9351116 | None:intergenic | 30.0% | |
| AACGTTCTATTTCCATATTG+CGG | - | chr2_3:9351107-9351126 | Msa0277010:CDS | 30.0% | |
| !!! | CAAAAGGGCTTTTAAGATAA+AGG | - | chr2_3:9351347-9351366 | Msa0277010:intron | 30.0% |
| ! | GGAGGTATAAATAGATTTGA+TGG | - | chr2_3:9351439-9351458 | Msa0277010:intron | 30.0% |
| !!! | TTCCATTTTTTGCAGGATTT+TGG | - | chr2_3:9351466-9351485 | Msa0277010:intron | 30.0% |
| TGCTAATAAAATGTGGTTTC+AGG | - | chr2_3:9351904-9351923 | Msa0277010:intron | 30.0% | |
| AAAGTAGGTCTGTATATAAC+TGG | + | chr2_3:9351949-9351968 | None:intergenic | 30.0% | |
| AAGTTAAAATGTAGTGAGAG+AGG | + | chr2_3:9351979-9351998 | None:intergenic | 30.0% | |
| TCAGTTCATTATAAGTATGG+GGG | - | chr2_3:9352049-9352068 | Msa0277010:intron | 30.0% | |
| !! | TTGACTTGTACATCAAATCA+GGG | + | chr2_3:9352099-9352118 | None:intergenic | 30.0% |
| ! | TTTGTCAGTTGAGATGATTT+TGG | - | chr2_3:9352205-9352224 | Msa0277010:CDS | 30.0% |
| TTGTATTTATGGTGTTTGCA+CGG | - | chr2_3:9352289-9352308 | Msa0277010:five_prime_UTR | 30.0% | |
| AGAATCAAATAGAAGGAGAA+AGG | + | chr2_3:9352437-9352456 | None:intergenic | 30.0% | |
| TTCTTTCATTTACAAGGGTT+AGG | - | chr2_3:9352453-9352472 | Msa0277010:intron | 30.0% | |
| TCTTTCATTTACAAGGGTTA+GGG | - | chr2_3:9352454-9352473 | Msa0277010:intron | 30.0% | |
| AAAAGATATTGAGTGAGCAA+TGG | + | chr2_3:9352637-9352656 | None:intergenic | 30.0% | |
| AAGGAACTGAAAAACAATAC+AGG | + | chr2_3:9352696-9352715 | None:intergenic | 30.0% | |
| !! | TATTGTTTTTCAGTTCCTTG+AGG | - | chr2_3:9352697-9352716 | Msa0277010:five_prime_UTR | 30.0% |
| !! | ATTGTTTTTCAGTTCCTTGA+GGG | - | chr2_3:9352698-9352717 | Msa0277010:five_prime_UTR | 30.0% |
| TGCATTTCGATTCACAATAT+TGG | + | chr2_3:9352825-9352844 | None:intergenic | 30.0% | |
| AATATTGTGAATCGAAATGC+AGG | - | chr2_3:9352824-9352843 | Msa0277010:five_prime_UTR | 30.0% | |
| ! | CTTTTTCCAACTTCGATAGT+GGG | - | chr2_3:9346561-9346580 | Msa0277010:three_prime_UTR | 35.0% |
| GGTGTAACGAGAATTATATG+GGG | - | chr2_3:9346637-9346656 | Msa0277010:three_prime_UTR | 35.0% | |
| AAGAATAATAAGCCAAACGG+CGG | + | chr2_3:9346850-9346869 | None:intergenic | 35.0% | |
| TGAAAAATACCTGAGTGAAG+TGG | + | chr2_3:9346955-9346974 | None:intergenic | 35.0% | |
| ACGTTTCACATTTACTTTGC+AGG | - | chr2_3:9347086-9347105 | Msa0277010:CDS | 35.0% | |
| TGATTCAAGAGCTATGCAAA+AGG | - | chr2_3:9347146-9347165 | Msa0277010:intron | 35.0% | |
| GGGAAAACATGATTGGAATT+TGG | - | chr2_3:9347375-9347394 | Msa0277010:intron | 35.0% | |
| ! | TTAAACTTTGCATTGATCCG+AGG | - | chr2_3:9347951-9347970 | Msa0277010:intron | 35.0% |
| ! | ATTGCAATTTTCTCTCTCCT+CGG | + | chr2_3:9347971-9347990 | None:intergenic | 35.0% |
| TTGTATCAATATACGGTGAC+GGG | - | chr2_3:9348004-9348023 | Msa0277010:intron | 35.0% | |
| CGAATAAGCACGAATTAACA+TGG | + | chr2_3:9348147-9348166 | None:intergenic | 35.0% | |
| ATTCTCTTGCCATGAAGATT+TGG | + | chr2_3:9348247-9348266 | None:intergenic | 35.0% | |
| CAATTCAATAGCCTAAATCC+AGG | + | chr2_3:9348311-9348330 | None:intergenic | 35.0% | |
| CTGGATTTAGGCTATTGAAT+TGG | - | chr2_3:9348309-9348328 | Msa0277010:intron | 35.0% | |
| AACTCATTAACCCTTCATCA+AGG | - | chr2_3:9348343-9348362 | Msa0277010:intron | 35.0% | |
| ! | TAATTGGCATATGCCATTTC+AGG | - | chr2_3:9348588-9348607 | Msa0277010:intron | 35.0% |
| !! | TGAAGAAAAAGTGCCTGAAA+TGG | + | chr2_3:9348604-9348623 | None:intergenic | 35.0% |
| TAACACAGTAAATTCCGACA+AGG | - | chr2_3:9348670-9348689 | Msa0277010:intron | 35.0% | |
| AAGCCGATATAAAACCTTGT+CGG | + | chr2_3:9348687-9348706 | None:intergenic | 35.0% | |
| !! | GCATTTTTGAAGGGATTTTC+TGG | - | chr2_3:9349064-9349083 | Msa0277010:intron | 35.0% |
| TTGACTGAATGGTATCTGAT+AGG | - | chr2_3:9349219-9349238 | Msa0277010:CDS | 35.0% | |
| ACTGACTGAAGCCTTAAAAT+AGG | - | chr2_3:9349351-9349370 | Msa0277010:intron | 35.0% | |
| GAGGAAAAATTTCTACTGCA+TGG | - | chr2_3:9349398-9349417 | Msa0277010:intron | 35.0% | |
| AAAAATTTCTACTGCATGGG+AGG | - | chr2_3:9349402-9349421 | Msa0277010:intron | 35.0% | |
| CAAATGAAATGGGAGATATG+AGG | - | chr2_3:9349640-9349659 | Msa0277010:intron | 35.0% | |
| TCTCAGTATATTGGAATCAG+AGG | - | chr2_3:9349750-9349769 | Msa0277010:intron | 35.0% | |
| ATAAATAAGCAATTCTGCGC+AGG | + | chr2_3:9349808-9349827 | None:intergenic | 35.0% | |
| GTGAATAGACGTTAGGAATT+AGG | + | chr2_3:9349836-9349855 | None:intergenic | 35.0% | |
| TATAGTCGTGAATAGACGTT+AGG | + | chr2_3:9349843-9349862 | None:intergenic | 35.0% | |
| ! | TTAATGACAATAAGCGTTGC+CGG | + | chr2_3:9350133-9350152 | None:intergenic | 35.0% |
| ! | GACATTGCTGCTTATATCTT+TGG | - | chr2_3:9350154-9350173 | Msa0277010:intron | 35.0% |
| !! | AAAACTTGGGAGGGTTTTAT+TGG | - | chr2_3:9350220-9350239 | Msa0277010:intron | 35.0% |
| !!! | AAACTTGGGAGGGTTTTATT+GGG | - | chr2_3:9350221-9350240 | Msa0277010:intron | 35.0% |
| AACCATCATATCTGCATTCA+TGG | - | chr2_3:9350255-9350274 | Msa0277010:intron | 35.0% | |
| !! | TTTGTAGCTTGCTAACATCA+TGG | - | chr2_3:9350424-9350443 | Msa0277010:CDS | 35.0% |
| !! | TTGTAGCTTGCTAACATCAT+GGG | - | chr2_3:9350425-9350444 | Msa0277010:CDS | 35.0% |
| GATGTGAAATGAACACAAGT+TGG | + | chr2_3:9350528-9350547 | None:intergenic | 35.0% | |
| TAAATGCAGGATTTGTCAAC+TGG | - | chr2_3:9350564-9350583 | Msa0277010:intron | 35.0% | |
| CCAGAATCTTACTCATTGTT+GGG | - | chr2_3:9350621-9350640 | Msa0277010:intron | 35.0% | |
| AATCTTACTCATTGTTGGGA+TGG | - | chr2_3:9350625-9350644 | Msa0277010:intron | 35.0% | |
| ACTGCAAAGTAGATACTAGT+AGG | + | chr2_3:9350702-9350721 | None:intergenic | 35.0% | |
| CTTTGCAGTGTATGATTATG+TGG | - | chr2_3:9350713-9350732 | Msa0277010:CDS | 35.0% | |
| TTGAGTCTACAGAGTCAAAT+TGG | + | chr2_3:9350815-9350834 | None:intergenic | 35.0% | |
| AATGATACGGTCTATTGAGT+TGG | + | chr2_3:9350947-9350966 | None:intergenic | 35.0% | |
| ! | AATAGACCGTATCATTGACT+TGG | - | chr2_3:9350951-9350970 | Msa0277010:intron | 35.0% |
| GGTATCAACATAGGATTTGA+AGG | - | chr2_3:9351055-9351074 | Msa0277010:intron | 35.0% | |
| TTATAAGCTCAACCGCAATA+TGG | + | chr2_3:9351122-9351141 | None:intergenic | 35.0% | |
| ! | GGATTGGCATCTCATTATTA+CGG | + | chr2_3:9351157-9351176 | None:intergenic | 35.0% |
| AATCCATAAACCTGGAATGT+CGG | - | chr2_3:9351172-9351191 | Msa0277010:CDS | 35.0% | |
| AGGATAGATATCTCTTTCCA+AGG | + | chr2_3:9351246-9351265 | None:intergenic | 35.0% | |
| TATCTATCCTACCAGTTCAA+TGG | - | chr2_3:9351256-9351275 | Msa0277010:CDS | 35.0% | |
| GCTTCAATTATTGCACCTTT+CGG | - | chr2_3:9351303-9351322 | Msa0277010:CDS | 35.0% | |
| TCTTTGCAAGTGGTTTCAAA+AGG | - | chr2_3:9351331-9351350 | Msa0277010:CDS | 35.0% | |
| CTTTGCAAGTGGTTTCAAAA+GGG | - | chr2_3:9351332-9351351 | Msa0277010:CDS | 35.0% | |
| CTTGATCAGAAAAATGGAAG+TGG | + | chr2_3:9351383-9351402 | None:intergenic | 35.0% | |
| TTTATACCTCCGACCTAAAT+GGG | + | chr2_3:9351430-9351449 | None:intergenic | 35.0% | |
| ATTTATACCTCCGACCTAAA+TGG | + | chr2_3:9351431-9351450 | None:intergenic | 35.0% | |
| TGAAACATCAAAAGTCTACC+TGG | + | chr2_3:9351537-9351556 | None:intergenic | 35.0% | |
| !! | GTTGGTAATATTTGACTGCT+TGG | - | chr2_3:9351576-9351595 | Msa0277010:intron | 35.0% |
| TGAAAACATGTAGATCTCGT+AGG | - | chr2_3:9351834-9351853 | Msa0277010:intron | 35.0% | |
| TTAAAATGTAGTGAGAGAGG+AGG | + | chr2_3:9351976-9351995 | None:intergenic | 35.0% | |
| !! | CTTGACTTGTACATCAAATC+AGG | + | chr2_3:9352100-9352119 | None:intergenic | 35.0% |
| ATCTCAACTGACAAACTTTG+CGG | + | chr2_3:9352200-9352219 | None:intergenic | 35.0% | |
| TGTATTTATGGTGTTTGCAC+GGG | - | chr2_3:9352290-9352309 | Msa0277010:five_prime_UTR | 35.0% | |
| ATTTACAAGGGTTAGGGAAA+AGG | - | chr2_3:9352460-9352479 | Msa0277010:intron | 35.0% | |
| AGTGAAACGAATCAAAGACT+CGG | - | chr2_3:9352506-9352525 | Msa0277010:five_prime_UTR | 35.0% | |
| AGTAGCGAGAGAAACATAAT+GGG | + | chr2_3:9352577-9352596 | None:intergenic | 35.0% | |
| !! | TTGTTTTTCAGTTCCTTGAG+GGG | - | chr2_3:9352699-9352718 | Msa0277010:five_prime_UTR | 35.0% |
| AAATGTTAATACTCCCCTCA+AGG | + | chr2_3:9352715-9352734 | None:intergenic | 35.0% | |
| !! | GCTTTTTCCAACTTCGATAG+TGG | - | chr2_3:9346560-9346579 | Msa0277010:three_prime_UTR | 40.0% |
| ! | GCACCTCATTAGAACGTTTT+CGG | + | chr2_3:9347224-9347243 | None:intergenic | 40.0% |
| GTATAAGGGCTCGTTTCAAT+TGG | + | chr2_3:9347636-9347655 | None:intergenic | 40.0% | |
| TTGGGGATTAAACAAAAGCG+CGG | - | chr2_3:9347758-9347777 | Msa0277010:intron | 40.0% | |
| CCATTCGCTTTACTAACTTC+TGG | + | chr2_3:9348083-9348102 | None:intergenic | 40.0% | |
| CCAGAAGTTAGTAAAGCGAA+TGG | - | chr2_3:9348080-9348099 | Msa0277010:CDS | 40.0% | |
| TATTCGTCCGTTTGGATGAT+TGG | - | chr2_3:9348161-9348180 | Msa0277010:CDS | 40.0% | |
| ATTCGTCCGTTTGGATGATT+GGG | - | chr2_3:9348162-9348181 | Msa0277010:CDS | 40.0% | |
| AAAGCTCCCAATCATCCAAA+CGG | + | chr2_3:9348171-9348190 | None:intergenic | 40.0% | |
| CAATCATGGCAGTAATGTAG+AGG | + | chr2_3:9348217-9348236 | None:intergenic | 40.0% | |
| GCTTATCTTCATGAGTTCGA+CGG | + | chr2_3:9348283-9348302 | None:intergenic | 40.0% | |
| ATAAGCAGCTTCCTGGATTT+AGG | - | chr2_3:9348297-9348316 | Msa0277010:intron | 40.0% | |
| ATAATAGATGTCACGGCCTA+TGG | + | chr2_3:9348454-9348473 | None:intergenic | 40.0% | |
| !! | AATCGGATGGTGGATTATGA+CGG | + | chr2_3:9348527-9348546 | None:intergenic | 40.0% |
| TCCCTGTACATTACAGGTAA+CGG | - | chr2_3:9348746-9348765 | Msa0277010:intron | 40.0% | |
| ACCGTTACCTGTAATGTACA+GGG | + | chr2_3:9348750-9348769 | None:intergenic | 40.0% | |
| CCTGAGCCCAATCAATAAAA+GGG | + | chr2_3:9348925-9348944 | None:intergenic | 40.0% | |
| TCCTGAGCCCAATCAATAAA+AGG | + | chr2_3:9348926-9348945 | None:intergenic | 40.0% | |
| GATTGGGCTCAGGATTTATA+TGG | - | chr2_3:9348932-9348951 | Msa0277010:intron | 40.0% | |
| ACCAATTTGGACAGTATGCT+TGG | - | chr2_3:9348989-9349008 | Msa0277010:intron | 40.0% | |
| TCCAAGCATACTGTCCAAAT+TGG | + | chr2_3:9348993-9349012 | None:intergenic | 40.0% | |
| GCTTGTAAGCTAGATCACTT+CGG | - | chr2_3:9349299-9349318 | Msa0277010:intron | 40.0% | |
| TTCAGTCAGTTCTACGGTTT+GGG | + | chr2_3:9349341-9349360 | None:intergenic | 40.0% | |
| TAAGGCTTCAGTCAGTTCTA+CGG | + | chr2_3:9349347-9349366 | None:intergenic | 40.0% | |
| AGATTAGGGATTGAGCAATG+AGG | - | chr2_3:9349379-9349398 | Msa0277010:intron | 40.0% | |
| ! | TCTCCTCATGGATGACTTTT+CGG | - | chr2_3:9349442-9349461 | Msa0277010:intron | 40.0% |
| TTTCCGAAAAGTCATCCATG+AGG | + | chr2_3:9349448-9349467 | None:intergenic | 40.0% | |
| !!! | AGGATTACTTGCCGACTTTT+CGG | - | chr2_3:9349487-9349506 | Msa0277010:intron | 40.0% |
| ATCTCCAAAGAAAACTTGGG+AGG | - | chr2_3:9350210-9350229 | Msa0277010:intron | 40.0% | |
| TCTCCAAAGAAAACTTGGGA+GGG | - | chr2_3:9350211-9350230 | Msa0277010:intron | 40.0% | |
| ! | AAACCCTCCCAAGTTTTCTT+TGG | + | chr2_3:9350217-9350236 | None:intergenic | 40.0% |
| !!! | AACTTGGGAGGGTTTTATTG+GGG | - | chr2_3:9350222-9350241 | Msa0277010:intron | 40.0% |
| CACCATGAATGCAGATATGA+TGG | + | chr2_3:9350260-9350279 | None:intergenic | 40.0% | |
| TGTTAGAGAGCTACCTTTCT+TGG | + | chr2_3:9350473-9350492 | None:intergenic | 40.0% | |
| ! | TCTGGCTTAAACAGAAAACC+AGG | + | chr2_3:9350606-9350625 | None:intergenic | 40.0% |
| GCCAGAATCTTACTCATTGT+TGG | - | chr2_3:9350620-9350639 | Msa0277010:intron | 40.0% | |
| CCCAACAATGAGTAAGATTC+TGG | + | chr2_3:9350624-9350643 | None:intergenic | 40.0% | |
| CAAATTGGATGTTGTGTCTG+AGG | + | chr2_3:9350800-9350819 | None:intergenic | 40.0% | |
| GTATCTAATCGGGACAAAGA+AGG | - | chr2_3:9350864-9350883 | Msa0277010:intron | 40.0% | |
| AATCGGGACAAAGAAGGATA+CGG | - | chr2_3:9350870-9350889 | Msa0277010:intron | 40.0% | |
| GACATTCCAGGTTTATGGAT+TGG | + | chr2_3:9351173-9351192 | None:intergenic | 40.0% | |
| ! | TTATGATTTGCCGACATTCC+AGG | + | chr2_3:9351185-9351204 | None:intergenic | 40.0% |
| CATAAAGCATGCCATTGAAC+TGG | + | chr2_3:9351270-9351289 | None:intergenic | 40.0% | |
| CAATGGCATGCTTTATGTCT+TGG | - | chr2_3:9351273-9351292 | Msa0277010:CDS | 40.0% | |
| TCAATTATTGCACCTTTCGG+AGG | - | chr2_3:9351306-9351325 | Msa0277010:CDS | 40.0% | |
| CGAATATCACCCATTTAGGT+CGG | - | chr2_3:9351418-9351437 | Msa0277010:intron | 40.0% | |
| !!! | TGGGTGTTTCCATTTTTTGC+AGG | - | chr2_3:9351459-9351478 | Msa0277010:intron | 40.0% |
| CGCCAAAATCCTGCAAAAAA+TGG | + | chr2_3:9351471-9351490 | None:intergenic | 40.0% | |
| !! | GATTTTGGCGATAGTATTCC+AGG | - | chr2_3:9351481-9351500 | Msa0277010:intron | 40.0% |
| ! | TACAACTTTCTTTGGGGGTA+GGG | + | chr2_3:9351696-9351715 | None:intergenic | 40.0% |
| ! | TTACAACTTTCTTTGGGGGT+AGG | + | chr2_3:9351697-9351716 | None:intergenic | 40.0% |
| TCATTATAAGTATGGGGGAC+TGG | - | chr2_3:9352054-9352073 | Msa0277010:intron | 40.0% | |
| CATCAAATCAGGGTCTAGAA+TGG | + | chr2_3:9352089-9352108 | None:intergenic | 40.0% | |
| CCATCTACACAAGGACAAAT+TGG | + | chr2_3:9352133-9352152 | None:intergenic | 40.0% | |
| CCAATTTGTCCTTGTGTAGA+TGG | - | chr2_3:9352130-9352149 | Msa0277010:intron | 40.0% | |
| TGTCCTTGTGTAGATGGTTA+TGG | - | chr2_3:9352136-9352155 | Msa0277010:intron | 40.0% | |
| ! | AGTTGAGATGATTTTGGACC+AGG | - | chr2_3:9352211-9352230 | Msa0277010:CDS | 40.0% |
| ! | ATTGATGAGCCTGTCATTTG+AGG | - | chr2_3:9352324-9352343 | Msa0277010:intron | 40.0% |
| CTTCTTGTTCCTCAAATGAC+AGG | + | chr2_3:9352336-9352355 | None:intergenic | 40.0% | |
| AGGAACAAGAAGCTCTGTAT+CGG | - | chr2_3:9352344-9352363 | Msa0277010:intron | 40.0% | |
| AGGACAAATACACCTTGCAA+CGG | + | chr2_3:9352417-9352436 | None:intergenic | 40.0% | |
| GAGTAGCGAGAGAAACATAA+TGG | + | chr2_3:9352578-9352597 | None:intergenic | 40.0% | |
| ! | GCAGAGACAAGGGACAATTT+TGG | - | chr2_3:9346585-9346604 | Msa0277010:three_prime_UTR | 45.0% |
| GTGCGCTGTTTATTCAGTTG+AGG | - | chr2_3:9346774-9346793 | Msa0277010:three_prime_UTR | 45.0% | |
| TAAAAAGCTTCACCGCCGTT+TGG | - | chr2_3:9346835-9346854 | Msa0277010:intron | 45.0% | |
| ATACCTGAGTGAAGTGGAAG+TGG | + | chr2_3:9346949-9346968 | None:intergenic | 45.0% | |
| CCTGAGGAAGAAGTAGAAGT+AGG | + | chr2_3:9347180-9347199 | None:intergenic | 45.0% | |
| CCTACTTCTACTTCTTCCTC+AGG | - | chr2_3:9347177-9347196 | Msa0277010:intron | 45.0% | |
| ACTTCTACTTCTTCCTCAGG+AGG | - | chr2_3:9347180-9347199 | Msa0277010:intron | 45.0% | |
| GCACCGAAAACGTTCTAATG+AGG | - | chr2_3:9347218-9347237 | Msa0277010:CDS | 45.0% | |
| ! | TTAAACAAAAGCGCGGTCGT+CGG | - | chr2_3:9347765-9347784 | Msa0277010:intron | 45.0% |
| ATTCACAGAGATTCCAGACG+TGG | - | chr2_3:9347801-9347820 | Msa0277010:intron | 45.0% | |
| GTTAGTAAAGCGAATGGCAG+CGG | - | chr2_3:9348086-9348105 | Msa0277010:CDS | 45.0% | |
| TTCGTGCTTATTCGTCCGTT+TGG | - | chr2_3:9348153-9348172 | Msa0277010:CDS | 45.0% | |
| CATGAAGATAAGCAGCTTCC+TGG | - | chr2_3:9348290-9348309 | Msa0277010:intron | 45.0% | |
| ! | AGCGTTGTCAATTTTCGCCA+TGG | - | chr2_3:9348386-9348405 | Msa0277010:intron | 45.0% |
| ! | GTTGTCAATTTTCGCCATGG+AGG | - | chr2_3:9348389-9348408 | Msa0277010:intron | 45.0% |
| CAAAATCTGCCACGCTATGA+CGG | + | chr2_3:9348422-9348441 | None:intergenic | 45.0% | |
| ACGTATTCTGAGTCAACGTC+TGG | - | chr2_3:9348646-9348665 | Msa0277010:intron | 45.0% | |
| TGCTACTCCCTGTACATTAC+AGG | - | chr2_3:9348740-9348759 | Msa0277010:intron | 45.0% | |
| CACCGTTACCTGTAATGTAC+AGG | + | chr2_3:9348751-9348770 | None:intergenic | 45.0% | |
| CAATGTCTTTGCTAGATGCC+TGG | - | chr2_3:9348815-9348834 | Msa0277010:CDS | 45.0% | |
| TGCTAGATGCCTGGCAAATT+TGG | - | chr2_3:9348824-9348843 | Msa0277010:CDS | 45.0% | |
| !! | CCCTTTTATTGATTGGGCTC+AGG | - | chr2_3:9348922-9348941 | Msa0277010:intron | 45.0% |
| ! | ACCGTGCCAAGCATTTTTGA+AGG | - | chr2_3:9349054-9349073 | Msa0277010:intron | 45.0% |
| CCCTTCAAAAATGCTTGGCA+CGG | + | chr2_3:9349058-9349077 | None:intergenic | 45.0% | |
| ! | CCGTGCCAAGCATTTTTGAA+GGG | - | chr2_3:9349055-9349074 | Msa0277010:intron | 45.0% |
| CTTCAGTCAGTTCTACGGTT+TGG | + | chr2_3:9349342-9349361 | None:intergenic | 45.0% | |
| ATCCCTATGCTCCGAAAAGT+CGG | + | chr2_3:9349501-9349520 | None:intergenic | 45.0% | |
| TGCAGGATTTGTCAACTGGT+TGG | - | chr2_3:9350568-9350587 | Msa0277010:intron | 45.0% | |
| ATCGGGACAAAGAAGGATAC+GGG | - | chr2_3:9350871-9350890 | Msa0277010:intron | 45.0% | |
| !! | GGGTTAGCTCGAAAACAGTT+GGG | - | chr2_3:9350891-9350910 | Msa0277010:intron | 45.0% |
| GAGATGCCAATCCATAAACC+TGG | - | chr2_3:9351164-9351183 | Msa0277010:CDS | 45.0% | |
| TTGCCGACATTCCAGGTTTA+TGG | + | chr2_3:9351178-9351197 | None:intergenic | 45.0% | |
| GTTGTCTTGTGCAGTTTCCT+TGG | - | chr2_3:9351226-9351245 | Msa0277010:CDS | 45.0% | |
| AAGCATGCCATTGAACTGGT+AGG | + | chr2_3:9351266-9351285 | None:intergenic | 45.0% | |
| CTTGCAAAGAAACCTCCGAA+AGG | + | chr2_3:9351321-9351340 | None:intergenic | 45.0% | |
| TTCGGAGGTTTCTTTGCAAG+TGG | - | chr2_3:9351321-9351340 | Msa0277010:CDS | 45.0% | |
| CGAGCGAATATCACCCATTT+AGG | - | chr2_3:9351414-9351433 | Msa0277010:intron | 45.0% | |
| ATATCACCCATTTAGGTCGG+AGG | - | chr2_3:9351421-9351440 | Msa0277010:intron | 45.0% | |
| GATAGTATTCCAGGACATGG+TGG | - | chr2_3:9351490-9351509 | Msa0277010:intron | 45.0% | |
| !! | TGGTGGACTTACTGACAGAA+TGG | - | chr2_3:9351507-9351526 | Msa0277010:intron | 45.0% |
| GGAGATAGAAGGAACTTCCA+AGG | - | chr2_3:9351722-9351741 | Msa0277010:intron | 45.0% | |
| GTAAAGGCAGCAGCATGTAA+CGG | + | chr2_3:9352009-9352028 | None:intergenic | 45.0% | |
| CTGCCATAACCATCTACACA+AGG | + | chr2_3:9352142-9352161 | None:intergenic | 45.0% | |
| AACAAGAAGCTCTGTATCGG+AGG | - | chr2_3:9352347-9352366 | Msa0277010:intron | 45.0% | |
| GTTGTCTTAGATCCGTTGCA+AGG | - | chr2_3:9352402-9352421 | Msa0277010:intron | 45.0% | |
| AATCGAAATGCAGGCTGTCA+CGG | - | chr2_3:9352833-9352852 | Msa0277010:five_prime_UTR | 45.0% | |
| !!! | TTTTTTATAAGAATAAATAT+AGG | - | chr2_3:9347413-9347432 | Msa0277010:intron | 5.0% |
| !!! | ATTTTATTTTTATTCTAAAT+CGG | + | chr2_3:9348544-9348563 | None:intergenic | 5.0% |
| !! | AAAAAATTTAAAAGTAAATT+GGG | + | chr2_3:9349874-9349893 | None:intergenic | 5.0% |
| !! | AAAAAAATTTAAAAGTAAAT+TGG | + | chr2_3:9349875-9349894 | None:intergenic | 5.0% |
| TCTGCACCCACTATCGAAGT+TGG | + | chr2_3:9346570-9346589 | None:intergenic | 50.0% | |
| !! | GATAGTGGGTGCAGAGACAA+GGG | - | chr2_3:9346575-9346594 | Msa0277010:three_prime_UTR | 50.0% |
| TCTACTTCTTCCTCAGGAGG+AGG | - | chr2_3:9347183-9347202 | Msa0277010:intron | 50.0% | |
| CTTGATGTTGTTGCCGCCAT+AGG | - | chr2_3:9347682-9347701 | Msa0277010:intron | 50.0% | |
| CATTCTGCCAAACTCGCCTA+TGG | + | chr2_3:9347701-9347720 | None:intergenic | 50.0% | |
| ! | TAAACAAAAGCGCGGTCGTC+GGG | - | chr2_3:9347766-9347785 | Msa0277010:intron | 50.0% |
| ! | GATTTTGTGCCAGCTGCCAT+AGG | - | chr2_3:9348435-9348454 | Msa0277010:intron | 50.0% |
| AATGCTTGGCACGGTGAAAG+AGG | + | chr2_3:9349049-9349068 | None:intergenic | 50.0% | |
| !!! | TTGCCGACTTTTCGGAGCAT+AGG | - | chr2_3:9349495-9349514 | Msa0277010:intron | 50.0% |
| !!! | TGCCGACTTTTCGGAGCATA+GGG | - | chr2_3:9349496-9349515 | Msa0277010:intron | 50.0% |
| ACATCATGGGTCGTTCTCAG+TGG | - | chr2_3:9350438-9350457 | Msa0277010:CDS | 50.0% | |
| GTGGCTGACATGTCCAAGAA+AGG | - | chr2_3:9350457-9350476 | Msa0277010:CDS | 50.0% | |
| TGTCAAGTGCTTACCCAGTG+AGG | + | chr2_3:9350654-9350673 | None:intergenic | 50.0% | |
| !! | CGGGTTAGCTCGAAAACAGT+TGG | - | chr2_3:9350890-9350909 | Msa0277010:intron | 50.0% |
| GGCGATAGTATTCCAGGACA+TGG | - | chr2_3:9351487-9351506 | Msa0277010:intron | 50.0% | |
| TCAGTAAGTCCACCATGTCC+TGG | + | chr2_3:9351502-9351521 | None:intergenic | 50.0% | |
| !! | TACTGACAGAATGGACTGCC+AGG | - | chr2_3:9351516-9351535 | Msa0277010:intron | 50.0% |
| GAGAGAGAGAGAGAGAACTG+TGG | + | chr2_3:9351642-9351661 | None:intergenic | 50.0% | |
| GAGAGAGGAGGAGCAAAAGT+AGG | + | chr2_3:9351964-9351983 | None:intergenic | 50.0% | |
| GCGGCACAACAAATGACTGA+TGG | + | chr2_3:9352181-9352200 | None:intergenic | 50.0% | |
| AAGCTCTGTATCGGAGGCTT+GGG | - | chr2_3:9352353-9352372 | Msa0277010:intron | 50.0% | |
| !! | CTTGGGGAAGTGTTGCAACA+AGG | - | chr2_3:9352370-9352389 | Msa0277010:intron | 50.0% |
| CGTTCTTCTTGAGCTGCCAT+TGG | + | chr2_3:9352673-9352692 | None:intergenic | 50.0% | |
| ATCGAAATGCAGGCTGTCAC+GGG | - | chr2_3:9352834-9352853 | Msa0277010:five_prime_UTR | 50.0% | |
| !! | CGATAGTGGGTGCAGAGACA+AGG | - | chr2_3:9346574-9346593 | Msa0277010:three_prime_UTR | 55.0% |
| GCTCCACTTCCACTTCACTC+AGG | - | chr2_3:9346943-9346962 | Msa0277010:intron | 55.0% | |
| ACTTCTTCCTCAGGAGGAGG+AGG | - | chr2_3:9347186-9347205 | Msa0277010:intron | 55.0% | |
| TCTGCCAAACTCGCCTATGG+CGG | + | chr2_3:9347698-9347717 | None:intergenic | 55.0% | |
| !! | GGTTGGCTTGACTGTGATCC+TGG | - | chr2_3:9350585-9350604 | Msa0277010:intron | 55.0% |
| ! | TGTTGGGATGGACTCCTCAC+TGG | - | chr2_3:9350637-9350656 | Msa0277010:intron | 55.0% |
| ! | GTTGGGATGGACTCCTCACT+GGG | - | chr2_3:9350638-9350657 | Msa0277010:intron | 55.0% |
| ! | AGGCAGCAGCATGTAACGGA+GGG | + | chr2_3:9352005-9352024 | None:intergenic | 55.0% |
| AAGGCAGCAGCATGTAACGG+AGG | + | chr2_3:9352006-9352025 | None:intergenic | 55.0% | |
| GAAGCTCTGTATCGGAGGCT+TGG | - | chr2_3:9352352-9352371 | Msa0277010:intron | 55.0% | |
| AGCTCTGTATCGGAGGCTTG+GGG | - | chr2_3:9352354-9352373 | Msa0277010:intron | 55.0% | |
| AATGCAGGCTGTCACGGGTT+TGG | - | chr2_3:9352839-9352858 | Msa0277010:five_prime_UTR | 55.0% | |
| TGGAAGTGGAGCTGCGAGAG+CGG | + | chr2_3:9346935-9346954 | None:intergenic | 60.0% | |
| ACTTCGTCCTCCTCCTCCTG+AGG | + | chr2_3:9347196-9347215 | None:intergenic | 60.0% | |
| CAGGAGGAGGAGGACGAAGT+AGG | - | chr2_3:9347196-9347215 | Msa0277010:intron | 60.0% | |
| GTTGCCGCCATAGGCGAGTT+TGG | - | chr2_3:9347691-9347710 | Msa0277010:intron | 60.0% | |
| ATGACGGCATGGCACCTCCA+TGG | + | chr2_3:9348406-9348425 | None:intergenic | 60.0% | |
| TCTGCCACGCTATGACGGCA+TGG | + | chr2_3:9348417-9348436 | None:intergenic | 60.0% | |
| ATGTCACGGCCTATGGCAGC+TGG | + | chr2_3:9348447-9348466 | None:intergenic | 60.0% | |
| ! | GGCAGCAGCATGTAACGGAG+GGG | + | chr2_3:9352004-9352023 | None:intergenic | 60.0% |
| TTGGCGGCGGAAGAAGACGG+AGG | + | chr2_3:9346912-9346931 | None:intergenic | 65.0% | |
| CGGTTGGCGGCGGAAGAAGA+CGG | + | chr2_3:9346915-9346934 | None:intergenic | 65.0% | |
| AGTGGAGCTGCGAGAGCGGT+TGG | + | chr2_3:9346931-9346950 | None:intergenic | 65.0% | |
| ! | GGTGCCATGCCGTCATAGCG+TGG | - | chr2_3:9348410-9348429 | Msa0277010:intron | 65.0% |
| GGAGCTGCGAGAGCGGTTGG+CGG | + | chr2_3:9346928-9346947 | None:intergenic | 70.0% | |
| GCTGCGAGAGCGGTTGGCGG+CGG | + | chr2_3:9346925-9346944 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 9346560 | 9352869 | 9346560 | ID=Msa0277010;Name=Msa0277010 |
| chr2_3 | mRNA | 9346560 | 9352869 | 9346560 | ID=Msa0277010-mRNA-1;Parent=Msa0277010;Name=Msa0277010-mRNA-1;_AED=0.17;_eAED=0.17;_QI=456|1|1|1|0.91|0.84|13|248|427 |
| chr2_3 | exon | 9346560 | 9346795 | 9346560 | ID=Msa0277010-mRNA-1:exon:4277;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9347006 | 9347107 | 9347006 | ID=Msa0277010-mRNA-1:exon:4276;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9347197 | 9347280 | 9347197 | ID=Msa0277010-mRNA-1:exon:4275;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9347892 | 9347948 | 9347892 | ID=Msa0277010-mRNA-1:exon:4274;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9348061 | 9348189 | 9348061 | ID=Msa0277010-mRNA-1:exon:4273;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9348770 | 9348856 | 9348770 | ID=Msa0277010-mRNA-1:exon:4272;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9348951 | 9348998 | 9348951 | ID=Msa0277010-mRNA-1:exon:4271;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9349153 | 9349309 | 9349153 | ID=Msa0277010-mRNA-1:exon:4270;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9350344 | 9350485 | 9350344 | ID=Msa0277010-mRNA-1:exon:4269;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9350668 | 9350819 | 9350668 | ID=Msa0277010-mRNA-1:exon:4268;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9351099 | 9351355 | 9351099 | ID=Msa0277010-mRNA-1:exon:4267;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9352190 | 9352321 | 9352190 | ID=Msa0277010-mRNA-1:exon:4266;Parent=Msa0277010-mRNA-1 |
| chr2_3 | exon | 9352465 | 9352869 | 9352465 | ID=Msa0277010-mRNA-1:exon:4265;Parent=Msa0277010-mRNA-1 |
| chr2_3 | five_prime_UTR | 9352465 | 9352869 | 9352465 | ID=Msa0277010-mRNA-1:five_prime_utr;Parent=Msa0277010-mRNA-1 |
| chr2_3 | five_prime_UTR | 9352271 | 9352321 | 9352271 | ID=Msa0277010-mRNA-1:five_prime_utr;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9352190 | 9352270 | 9352190 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9351099 | 9351355 | 9351099 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9350668 | 9350819 | 9350668 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9350344 | 9350485 | 9350344 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9349153 | 9349309 | 9349153 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9348951 | 9348998 | 9348951 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9348770 | 9348856 | 9348770 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9348061 | 9348189 | 9348061 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9347892 | 9347948 | 9347892 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9347197 | 9347280 | 9347197 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | CDS | 9347018 | 9347107 | 9347018 | ID=Msa0277010-mRNA-1:cds;Parent=Msa0277010-mRNA-1 |
| chr2_3 | three_prime_UTR | 9347006 | 9347017 | 9347006 | ID=Msa0277010-mRNA-1:three_prime_utr;Parent=Msa0277010-mRNA-1 |
| chr2_3 | three_prime_UTR | 9346560 | 9346795 | 9346560 | ID=Msa0277010-mRNA-1:three_prime_utr;Parent=Msa0277010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
