AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0613340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0613340 MtrunA17_Chr4g0048491 87.960 299 3 1 1 299 1 266 0.0 522
Msa0613340 MtrunA17_Chr2g0323731 61.513 304 79 4 1 299 1 271 1.94e-106 310
Msa0613340 MtrunA17_Chr2g0318581 62.846 253 57 4 50 299 25 243 1.29e-96 285
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0613340 AT4G21450.1 58.055 329 74 6 1 299 1 295 1.78e-116 337
Msa0613340 AT4G21450.3 54.598 348 75 7 1 299 1 314 4.87e-111 324
Msa0613340 AT4G05060.1 58.044 317 77 6 1 294 1 284 1.21e-101 299
Msa0613340 AT5G54110.1 57.746 284 79 5 16 295 16 262 6.09e-94 279
Msa0613340 AT4G21450.2 50.617 243 57 5 1 213 1 210 4.71e-63 198
Msa0613340 AT5G54110.2 51.980 202 56 5 16 213 16 180 1.41e-44 150

Find 77 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATCTAATGTAGCATTTA+AGG 0.154803 4_2:-62173997 Msa0613340:intron
AAATGCTACATTAGATTTAC+TGG 0.228582 4_2:+62174001 None:intergenic
CAGGTTTCTTCCGTGCTTCA+AGG 0.310647 4_2:+62172909 None:intergenic
TCAAGAGGAGTGTTACTGTT+AGG 0.327375 4_2:+62176256 None:intergenic
GGAAAGTAAAGTTTGTTAGA+AGG 0.376948 4_2:+62176151 None:intergenic
TTAGGTTCGGAGTGAGGTTT+CGG 0.388073 4_2:+62176385 None:intergenic
CAAGAGGAGTGTTACTGTTA+GGG 0.393536 4_2:+62176257 None:intergenic
TAAAATTATCTAACCAGCTC+GGG 0.398885 4_2:+62173364 None:intergenic
TGTAGATGAGCCAGGAAAAC+AGG 0.420800 4_2:-62174051 Msa0613340:intron
ATTTAAAATCATGAGTTTGA+AGG 0.426290 4_2:-62173410 Msa0613340:CDS
TTGAAGAAATTCCAAACCTT+AGG 0.429466 4_2:+62176367 None:intergenic
TTAGGCCCTGCATCTTCTGC+AGG 0.429473 4_2:+62172890 None:intergenic
CTCACAGGACTTGGACGCTC+TGG 0.438074 4_2:+62173192 None:intergenic
AACAGTAACACTCCTCTTGA+AGG 0.439501 4_2:-62176253 Msa0613340:CDS
GAGAAGAGTTTCAAAATCAC+AGG 0.445545 4_2:-62172618 Msa0613340:three_prime_UTR
AGTTGTTTCATGCGTCCTCC+TGG 0.445612 4_2:-62173635 Msa0613340:CDS
GAAATTCCAAACCTTAGGTT+CGG 0.448162 4_2:+62176372 None:intergenic
AATGACATTTATCTACATAA+AGG 0.449589 4_2:+62172511 None:intergenic
AGCTTGAGACGACGTCGTGC+TGG 0.451902 4_2:+62176178 None:intergenic
CTCACTCCGAACCTAAGGTT+TGG 0.454205 4_2:-62176378 Msa0613340:CDS
ATGAGCCAGGAAAACAGGTT+AGG 0.467951 4_2:-62174046 Msa0613340:CDS
TTCTGTATAGAATGTTGGTC+TGG 0.475986 4_2:-62172666 Msa0613340:exon
AAGATACCTTGCTAAGCAGC+AGG 0.483964 4_2:-62172705 Msa0613340:CDS
GATGCAGGGCCTAAAATTAT+CGG 0.484695 4_2:-62172881 Msa0613340:CDS
AGAAGACGACGTCGTGTTGG+TGG 0.485495 4_2:+62176315 None:intergenic
AAGAAACCTGCAGAAGATGC+AGG 0.486887 4_2:-62172896 Msa0613340:CDS
GGCGAGAGTATCATAGCAAC+CGG 0.491969 4_2:-62173596 Msa0613340:intron
CTATTTGTATGTAGAGTAGT+TGG 0.498560 4_2:-62172375 Msa0613340:three_prime_UTR
GTAGATTCTGTATAGAATGT+TGG 0.505509 4_2:-62172671 Msa0613340:exon
CCGTCTTGTGTAGATGAGCC+AGG 0.506060 4_2:-62174059 Msa0613340:intron
ATAAAATTATCTAACCAGCT+CGG 0.529735 4_2:+62173363 None:intergenic
ATCATGAGTTTGAAGGTCAA+AGG 0.531786 4_2:-62173403 Msa0613340:CDS
CTGGATAAATTAATATATGT+TGG 0.534473 4_2:-62172647 Msa0613340:three_prime_UTR
AATTGATTACGTCCCCGAGC+TGG 0.536261 4_2:-62173377 Msa0613340:intron
TTTCGGTTCAGCTACGGCCA+TGG 0.537829 4_2:+62176402 None:intergenic
GGGCCTAAAATTATCGGTGA+AGG 0.540036 4_2:-62172875 Msa0613340:CDS
GTGAGGTTTCGGTTCAGCTA+CGG 0.540703 4_2:+62176396 None:intergenic
CGGTTCAGCTACGGCCATGG+TGG 0.541783 4_2:+62176405 None:intergenic
AACAGGTTAGGAGTGCCATC+AGG 0.542734 4_2:-62174034 Msa0613340:CDS
GCTTGAGACGACGTCGTGCT+GGG 0.544409 4_2:+62176179 None:intergenic
AACAGAAGACGACGTCGTGT+TGG 0.544962 4_2:+62176312 None:intergenic
GGTTCAGCTACGGCCATGGT+GGG 0.545878 4_2:+62176406 None:intergenic
TGAAAGAGGAAAATGAAGGA+AGG 0.546401 4_2:+62176453 None:intergenic
GAAGTGTTAGAATTGCGAAA+AGG 0.547722 4_2:+62176340 None:intergenic
AGGGCTTGTCATTGACGAAT+GGG 0.556311 4_2:-62172855 Msa0613340:intron
CCAGGTGCAAGGATAGCTCC+AGG 0.557167 4_2:+62173617 None:intergenic
GAAACCTCACTCCGAACCTA+AGG 0.559139 4_2:-62176383 Msa0613340:CDS
AAATCTGCTCAACTGCCACC+TGG 0.560385 4_2:+62173235 None:intergenic
CCTGGAGCTATCCTTGCACC+TGG 0.563540 4_2:-62173617 Msa0613340:CDS
TAGTAAAAGTAAGAATAGAC+AGG 0.563926 4_2:+62173800 None:intergenic
AGGTTTCTTCCGTGCTTCAA+GGG 0.567437 4_2:+62172910 None:intergenic
TGATACTCTCGCCAGGTGCA+AGG 0.572027 4_2:+62173606 None:intergenic
GTTGCTATGATACTCTCGCC+AGG 0.577145 4_2:+62173599 None:intergenic
GAAAGAGGAAAATGAAGGAA+GGG 0.577841 4_2:+62176454 None:intergenic
CATCGCCCTGCTGCTTAGCA+AGG 0.579673 4_2:+62172699 None:intergenic
ATTGTAAAACGTGAAAGTCA+AGG 0.584553 4_2:-62176486 Msa0613340:five_prime_UTR
AAGGGCTTGTCATTGACGAA+TGG 0.585970 4_2:-62172856 Msa0613340:CDS
AAAATGAAGGAAGGGAAACG+AGG 0.594661 4_2:+62176462 None:intergenic
CAAACCTTAGGTTCGGAGTG+AGG 0.596942 4_2:+62176379 None:intergenic
ATGATGAAAGAGGAAAATGA+AGG 0.598944 4_2:+62176449 None:intergenic
CTGATGCTGCCCTTGAAGCA+CGG 0.601872 4_2:-62172919 Msa0613340:CDS
TGCTAAGCAGCAGGGCGATG+TGG 0.604162 4_2:-62172696 Msa0613340:CDS
GGCCTAAAATTATCGGTGAA+GGG 0.609230 4_2:-62172874 Msa0613340:CDS
AATGAAAAGCCAGAAAAGAG+TGG 0.610602 4_2:-62173439 Msa0613340:CDS
AGAAACCTGCAGAAGATGCA+GGG 0.611107 4_2:-62172895 Msa0613340:CDS
GTTTGATGAGCAGAAAGACC+AGG 0.616359 4_2:-62173253 Msa0613340:CDS
GTGAAAACTATGTGTGGGTG+TGG 0.618633 4_2:-62172541 Msa0613340:three_prime_UTR
TGAAAAGTGAAAACTATGTG+TGG 0.620556 4_2:-62172547 Msa0613340:three_prime_UTR
TGTGAAGTTGAACCTTCAAG+AGG 0.629338 4_2:+62176241 None:intergenic
AGATACCTTGCTAAGCAGCA+GGG 0.656370 4_2:-62172704 Msa0613340:CDS
AAAATTATCTAACCAGCTCG+GGG 0.659211 4_2:+62173365 None:intergenic
GAAAAGTGAAAACTATGTGT+GGG 0.667787 4_2:-62172546 Msa0613340:three_prime_UTR
AAATGAAGGAAGGGAAACGA+GGG 0.672329 4_2:+62176463 None:intergenic
AGAAGAGTTTCAAAATCACA+GGG 0.682298 4_2:-62172617 Msa0613340:three_prime_UTR
TGATGAGCAGAAAGACCAGG+TGG 0.693468 4_2:-62173250 Msa0613340:CDS
AAACAGAGAGACACCCACCA+TGG 0.721309 4_2:-62176419 Msa0613340:exon
GGTGCAAGGATAGCTCCAGG+AGG 0.793325 4_2:+62173620 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTCAATTTAATTAGA+GGG - chr4_2:62172888-62172907 Msa0613340:CDS 10.0%
! CCCCCCCCCCCCCCCCCCGG+AGG + chr4_2:62173972-62173991 None:intergenic 100.0%
! CCCCCCCCCCCCCCCCCCCC+CGG + chr4_2:62173974-62173993 None:intergenic 100.0%
! CCGGGGGGGGGGGGGGGGGG+GGG - chr4_2:62173972-62173991 Msa0613340:intron 100.0%
!! GTTTATTTCAATTTAATTAG+AGG - chr4_2:62172887-62172906 Msa0613340:CDS 15.0%
!!! TATCTATAACTATAAACTTT+TGG - chr4_2:62172942-62172961 Msa0613340:CDS 15.0%
!!! ATCTATAACTATAAACTTTT+GGG - chr4_2:62172943-62172962 Msa0613340:CDS 15.0%
!!! AAGATCGTTTTATTATTTTT+TGG + chr4_2:62173732-62173751 None:intergenic 15.0%
!! ATGTTACATGATAATAAATA+GGG + chr4_2:62174955-62174974 None:intergenic 15.0%
!! AATGTTACATGATAATAAAT+AGG + chr4_2:62174956-62174975 None:intergenic 15.0%
!!! TTATTTAGATTTGTTTTCTA+AGG - chr4_2:62175594-62175613 Msa0613340:intron 15.0%
!! AATTGATTGTATATTACTTA+TGG - chr4_2:62175898-62175917 Msa0613340:intron 15.0%
!! ATTGATTGTATATTACTTAT+GGG - chr4_2:62175899-62175918 Msa0613340:intron 15.0%
!!! ATTTTTCTTCATTAAGATTT+TGG - chr4_2:62175927-62175946 Msa0613340:intron 15.0%
!! GTATGCAATTTAATTGTTAT+TGG - chr4_2:62172810-62172829 Msa0613340:intron 20.0%
!! AAACCAGATAAAAAAGTTTA+GGG + chr4_2:62173135-62173154 None:intergenic 20.0%
!! TAAACCAGATAAAAAAGTTT+AGG + chr4_2:62173136-62173155 None:intergenic 20.0%
!! TTATAATGTATGGAAATTGA+GGG + chr4_2:62173374-62173393 None:intergenic 20.0%
!! TCAATTTCCATACATTATAA+GGG - chr4_2:62173374-62173393 Msa0613340:intron 20.0%
!!! TCCATATATGATTTTAGTTT+TGG - chr4_2:62173463-62173482 Msa0613340:CDS 20.0%
!!! CCATATATGATTTTAGTTTT+GGG - chr4_2:62173464-62173483 Msa0613340:CDS 20.0%
!!! AAACTGTAAATTTTGAAAGT+AGG - chr4_2:62174600-62174619 Msa0613340:intron 20.0%
!! TAAATCTAATGTAGCATTTA+AGG - chr4_2:62174899-62174918 Msa0613340:intron 20.0%
!! TGTTACATGATAATAAATAG+GGG + chr4_2:62174954-62174973 None:intergenic 20.0%
!! ATATAAAGACGTATTAAGTA+GGG + chr4_2:62175017-62175036 None:intergenic 20.0%
!!! TGTATTTATTATACTAGCTT+AGG + chr4_2:62175369-62175388 None:intergenic 20.0%
!! AAGCTAGTATAATAAATACA+AGG - chr4_2:62175369-62175388 Msa0613340:intron 20.0%
!!! ATTTAAAATCATGAGTTTGA+AGG - chr4_2:62175486-62175505 Msa0613340:intron 20.0%
!!! TTTCAGTGTACTTTTTTATT+TGG - chr4_2:62175736-62175755 Msa0613340:intron 20.0%
!!! TTCAGTGTACTTTTTTATTT+GGG - chr4_2:62175737-62175756 Msa0613340:intron 20.0%
!!! AATTATCTGTTACTTTATTG+TGG - chr4_2:62175813-62175832 Msa0613340:intron 20.0%
!!! ATTATCTGTTACTTTATTGT+GGG - chr4_2:62175814-62175833 Msa0613340:intron 20.0%
!! CTGGATAAATTAATATATGT+TGG - chr4_2:62176249-62176268 Msa0613340:CDS 20.0%
!! AATGACATTTATCTACATAA+AGG + chr4_2:62176388-62176407 None:intergenic 20.0%
!!! ATAAATGTCATTATGTTTTC+AGG - chr4_2:62176396-62176415 Msa0613340:CDS 20.0%
!!! TTTTGAGAAAATGATGAAAG+AGG + chr4_2:62172460-62172479 None:intergenic 25.0%
!! CAAATGCAGTAACATATTTT+TGG + chr4_2:62173073-62173092 None:intergenic 25.0%
! CAAAAATATGTTACTGCATT+TGG - chr4_2:62173071-62173090 Msa0613340:intron 25.0%
!!! TTTCCCTAAACTTTTTTATC+TGG - chr4_2:62173129-62173148 Msa0613340:intron 25.0%
! AATACTTTGTGAAGTAGTAT+TGG + chr4_2:62173309-62173328 None:intergenic 25.0%
!! GCTTTCAATTTTTCCATTTT+CGG + chr4_2:62173333-62173352 None:intergenic 25.0%
! CTTATAATGTATGGAAATTG+AGG + chr4_2:62173375-62173394 None:intergenic 25.0%
! CTCAATTTCCATACATTATA+AGG - chr4_2:62173373-62173392 Msa0613340:intron 25.0%
! AAAATTTAGTTAGAGAACGA+TGG - chr4_2:62173440-62173459 Msa0613340:CDS 25.0%
! CCCAAAACTAAAATCATATA+TGG + chr4_2:62173467-62173486 None:intergenic 25.0%
!!! TATTATTTTTTGGTTACCCA+TGG + chr4_2:62173722-62173741 None:intergenic 25.0%
!! ATAAAACGATCTTTTCTCTT+TGG - chr4_2:62173739-62173758 Msa0613340:intron 25.0%
!! TAAAACGATCTTTTCTCTTT+GGG - chr4_2:62173740-62173759 Msa0613340:intron 25.0%
! GTCACAGCTAATATAAATTA+GGG - chr4_2:62174192-62174211 Msa0613340:intron 25.0%
! ATTACTGTACACGTAATTTA+TGG - chr4_2:62174298-62174317 Msa0613340:intron 25.0%
! ACTAAGCAGTTAAATTTGAA+TGG - chr4_2:62174426-62174445 Msa0613340:intron 25.0%
!!! ACTAAGATACCAAGTTTTAA+TGG - chr4_2:62174569-62174588 Msa0613340:intron 25.0%
!! CTAAAAGTACATACAACATT+AGG + chr4_2:62174683-62174702 None:intergenic 25.0%
!! CTAATGTTGTATGTACTTTT+AGG - chr4_2:62174681-62174700 Msa0613340:intron 25.0%
!!! TTTTAGGTCCATAAATACAT+AGG - chr4_2:62174697-62174716 Msa0613340:intron 25.0%
! AAATGCTACATTAGATTTAC+TGG + chr4_2:62174898-62174917 None:intergenic 25.0%
! GTTACATGATAATAAATAGG+GGG + chr4_2:62174953-62174972 None:intergenic 25.0%
! TATAAAGACGTATTAAGTAG+GGG + chr4_2:62175016-62175035 None:intergenic 25.0%
! CATATAAAGACGTATTAAGT+AGG + chr4_2:62175018-62175037 None:intergenic 25.0%
! TAGTAAAAGTAAGAATAGAC+AGG + chr4_2:62175099-62175118 None:intergenic 25.0%
!! CCAACACTAATTTAGAATAT+AGG + chr4_2:62175178-62175197 None:intergenic 25.0%
! CCTATATTCTAAATTAGTGT+TGG - chr4_2:62175175-62175194 Msa0613340:intron 25.0%
!! TTTCTCTACATATTCTTTTC+TGG - chr4_2:62175337-62175356 Msa0613340:intron 25.0%
!! TTCTCTACATATTCTTTTCT+GGG - chr4_2:62175338-62175357 Msa0613340:intron 25.0%
! ATAAAATTATCTAACCAGCT+CGG + chr4_2:62175536-62175555 None:intergenic 25.0%
!!! CTGAAATTTTTTTTACTCAC+AGG + chr4_2:62175722-62175741 None:intergenic 25.0%
!!! TTTTATTTGGGCAATTTTTG+TGG - chr4_2:62175749-62175768 Msa0613340:intron 25.0%
!!! AGATTTTGGAAAAATTGAAG+CGG - chr4_2:62175941-62175960 Msa0613340:intron 25.0%
!! CTTTCTGAAAAAACATAATC+AGG + chr4_2:62176161-62176180 None:intergenic 25.0%
!!! TTATGTTTTTTCAGAAAGAG+AGG - chr4_2:62176163-62176182 Msa0613340:CDS 25.0%
!! CTTTTTCTTGGAATATTTTC+AGG - chr4_2:62176303-62176322 Msa0613340:CDS 25.0%
ATTGTAAAACGTGAAAGTCA+AGG - chr4_2:62172410-62172429 Msa0613340:three_prime_UTR 30.0%
ATGATGAAAGAGGAAAATGA+AGG + chr4_2:62172450-62172469 None:intergenic 30.0%
TTGAAGAAATTCCAAACCTT+AGG + chr4_2:62172532-62172551 None:intergenic 30.0%
! TATGATGATGATGATGATGA+AGG + chr4_2:62172618-62172637 None:intergenic 30.0%
!! GGAAAGTAAAGTTTGTTAGA+AGG + chr4_2:62172748-62172767 None:intergenic 30.0%
GAATTCTTGCCTGTTTAAAA+AGG - chr4_2:62173156-62173175 Msa0613340:intron 30.0%
! TCAACCATTCCTTTTTAAAC+AGG + chr4_2:62173168-62173187 None:intergenic 30.0%
! TCACAAAGTATTTCCGAAAA+TGG - chr4_2:62173317-62173336 Msa0613340:intron 30.0%
AAAAAGGCCCTTATAATGTA+TGG + chr4_2:62173384-62173403 None:intergenic 30.0%
AGATTAAAATCTAACGCCTA+AGG + chr4_2:62173410-62173429 None:intergenic 30.0%
!!! TATGATTTTAGTTTTGGGTC+AGG - chr4_2:62173469-62173488 Msa0613340:CDS 30.0%
CATATAGTACATTCATCACT+TGG + chr4_2:62173505-62173524 None:intergenic 30.0%
! TTCTTTTTACCAACATAGTG+TGG - chr4_2:62173543-62173562 Msa0613340:intron 30.0%
ATCAGAGAAGACAACATTTA+AGG - chr4_2:62173785-62173804 Msa0613340:CDS 30.0%
! AACATTTAAGGTCAGTGTTA+AGG - chr4_2:62173797-62173816 Msa0613340:CDS 30.0%
AGCTGTCGTAACTATTATAA+CGG + chr4_2:62173875-62173894 None:intergenic 30.0%
GGTCACAGCTAATATAAATT+AGG - chr4_2:62174191-62174210 Msa0613340:intron 30.0%
CTAATATAAATTAGGGAGCA+AGG - chr4_2:62174199-62174218 Msa0613340:intron 30.0%
TTGAAAGTAGGTCAAACAAA+TGG - chr4_2:62174612-62174631 Msa0613340:intron 30.0%
TGAAAGTAGGTCAAACAAAT+GGG - chr4_2:62174613-62174632 Msa0613340:intron 30.0%
TGAATCTGCCTATGTATTTA+TGG + chr4_2:62174708-62174727 None:intergenic 30.0%
TAAATACATAGGCAGATTCA+TGG - chr4_2:62174708-62174727 Msa0613340:intron 30.0%
GAACAAAATTGAGTAAGAGA+AGG + chr4_2:62174805-62174824 None:intergenic 30.0%
! CTAATGTAGCATTTAAGGTA+TGG - chr4_2:62174904-62174923 Msa0613340:intron 30.0%
TAAATAGGGGGTAAATAAAC+AGG + chr4_2:62174941-62174960 None:intergenic 30.0%
AAGTAGGGGAATAAATAAAC+AGG + chr4_2:62175002-62175021 None:intergenic 30.0%
!!! TCTGGCTTTTCATTATTTTC+TGG + chr4_2:62175451-62175470 None:intergenic 30.0%
TAAAATTATCTAACCAGCTC+GGG + chr4_2:62175535-62175554 None:intergenic 30.0%
TTCCAGGCAGAAAAAATTAA+TGG + chr4_2:62175620-62175639 None:intergenic 30.0%
!!! TTTTTTTTACTCACAGGACT+TGG + chr4_2:62175716-62175735 None:intergenic 30.0%
! CAAATTGCAATACTCACTTT+TGG - chr4_2:62176103-62176122 Msa0613340:intron 30.0%
GTAGATTCTGTATAGAATGT+TGG - chr4_2:62176225-62176244 Msa0613340:CDS 30.0%
AGAAGAGTTTCAAAATCACA+GGG - chr4_2:62176279-62176298 Msa0613340:CDS 30.0%
!!! TTGGAATATTTTCAGGTGAA+TGG - chr4_2:62176310-62176329 Msa0613340:CDS 30.0%
TGAAAAGTGAAAACTATGTG+TGG - chr4_2:62176349-62176368 Msa0613340:CDS 30.0%
GAAAAGTGAAAACTATGTGT+GGG - chr4_2:62176350-62176369 Msa0613340:CDS 30.0%
!! CATTATGTTTTCAGGCTTTT+TGG - chr4_2:62176404-62176423 Msa0613340:exon 30.0%
CTATTTGTATGTAGAGTAGT+TGG - chr4_2:62176521-62176540 Msa0613340:five_prime_UTR 30.0%
GAAAGAGGAAAATGAAGGAA+GGG + chr4_2:62172445-62172464 None:intergenic 35.0%
TGAAAGAGGAAAATGAAGGA+AGG + chr4_2:62172446-62172465 None:intergenic 35.0%
GAAATTCCAAACCTTAGGTT+CGG + chr4_2:62172527-62172546 None:intergenic 35.0%
! GAAGTGTTAGAATTGCGAAA+AGG + chr4_2:62172559-62172578 None:intergenic 35.0%
AAATGAGCAGCATACATACA+AGG + chr4_2:62172769-62172788 None:intergenic 35.0%
CTTCTAAACTTGTGCCTTAA+GGG - chr4_2:62173094-62173113 Msa0613340:intron 35.0%
!! AATGTTAACTTGTGCCCTTA+AGG + chr4_2:62173111-62173130 None:intergenic 35.0%
CTTGCCTGTTTAAAAAGGAA+TGG - chr4_2:62173161-62173180 Msa0613340:intron 35.0%
!! TGGTTGACTTGTTTATGTTC+TGG - chr4_2:62173181-62173200 Msa0613340:intron 35.0%
GTGAATAAGTGAAATGTCAC+AGG + chr4_2:62173265-62173284 None:intergenic 35.0%
!! CGTACGAAAGATAACTTGTT+AGG - chr4_2:62173628-62173647 Msa0613340:CDS 35.0%
!! GAAAGATAACTTGTTAGGAG+AGG - chr4_2:62173633-62173652 Msa0613340:CDS 35.0%
ATGTTGTCTTCTCTGATTGA+CGG + chr4_2:62173782-62173801 None:intergenic 35.0%
! AGGTATTTTGTATGACATCC+TGG + chr4_2:62173952-62173971 None:intergenic 35.0%
GATGTCATACAAAATACCTC+CGG - chr4_2:62173953-62173972 Msa0613340:intron 35.0%
ATGTCATACAAAATACCTCC+GGG - chr4_2:62173954-62173973 Msa0613340:intron 35.0%
TCATGTGACTAAAAAAGGGA+AGG + chr4_2:62174081-62174100 None:intergenic 35.0%
GCAGTCATGTGACTAAAAAA+GGG + chr4_2:62174085-62174104 None:intergenic 35.0%
AGCAGTCATGTGACTAAAAA+AGG + chr4_2:62174086-62174105 None:intergenic 35.0%
ATTTATATTAGCTGTGACCG+AGG + chr4_2:62174190-62174209 None:intergenic 35.0%
AGTAACTTCCATTGCTAACA+AGG + chr4_2:62174468-62174487 None:intergenic 35.0%
TGTTAGCAATGGAAGTTACT+AGG - chr4_2:62174468-62174487 Msa0613340:intron 35.0%
GTTAGCAATGGAAGTTACTA+GGG - chr4_2:62174469-62174488 Msa0613340:intron 35.0%
GCATAAAATGACCAATCATG+AGG + chr4_2:62174780-62174799 None:intergenic 35.0%
!! ACTGGTGTTTTTAATCCTGA+TGG + chr4_2:62174880-62174899 None:intergenic 35.0%
!! ATATGCAGTTTTTGTTGTCG+CGG - chr4_2:62175049-62175068 Msa0613340:intron 35.0%
! TTACTATGTCACTGTTTTGC+AGG - chr4_2:62175113-62175132 Msa0613340:intron 35.0%
AGAAATCGAATATTGCCTAC+CGG + chr4_2:62175322-62175341 None:intergenic 35.0%
AATGAAAAGCCAGAAAAGAG+TGG - chr4_2:62175457-62175476 Msa0613340:intron 35.0%
! AATTTGAGTCCACTCTTTTC+TGG + chr4_2:62175469-62175488 None:intergenic 35.0%
ATCATGAGTTTGAAGGTCAA+AGG - chr4_2:62175493-62175512 Msa0613340:intron 35.0%
AAAATTATCTAACCAGCTCG+GGG + chr4_2:62175534-62175553 None:intergenic 35.0%
AACTAGTGCAGAAAGAACAA+AGG + chr4_2:62175788-62175807 None:intergenic 35.0%
!!! TGTTTTTTCAGAAAGAGAGG+AGG - chr4_2:62176166-62176185 Msa0613340:CDS 35.0%
!!! GTTTTTTCAGAAAGAGAGGA+GGG - chr4_2:62176167-62176186 Msa0613340:CDS 35.0%
TTCTGTATAGAATGTTGGTC+TGG - chr4_2:62176230-62176249 Msa0613340:CDS 35.0%
GAGAAGAGTTTCAAAATCAC+AGG - chr4_2:62176278-62176297 Msa0613340:CDS 35.0%
! AAATCACAGGGTCTTTTTCT+TGG - chr4_2:62176291-62176310 Msa0613340:CDS 35.0%
!!! TTTTCAGGCTTTTTGGTTTG+TGG - chr4_2:62176411-62176430 Msa0613340:exon 35.0%
! GATGTCAATCTGTTTTGCTA+TGG - chr4_2:62176496-62176515 Msa0613340:five_prime_UTR 35.0%
AAATGAAGGAAGGGAAACGA+GGG + chr4_2:62172436-62172455 None:intergenic 40.0%
AAAATGAAGGAAGGGAAACG+AGG + chr4_2:62172437-62172456 None:intergenic 40.0%
!! CAAGAGGAGTGTTACTGTTA+GGG + chr4_2:62172642-62172661 None:intergenic 40.0%
!! TCAAGAGGAGTGTTACTGTT+AGG + chr4_2:62172643-62172662 None:intergenic 40.0%
AACAGTAACACTCCTCTTGA+AGG - chr4_2:62172643-62172662 Msa0613340:three_prime_UTR 40.0%
TGTGAAGTTGAACCTTCAAG+AGG + chr4_2:62172658-62172677 None:intergenic 40.0%
!! TGGGTCATGTTAACTTGTGT+CGG - chr4_2:62172962-62172981 Msa0613340:intron 40.0%
GCTTCTAAACTTGTGCCTTA+AGG - chr4_2:62173093-62173112 Msa0613340:intron 40.0%
AGCTCAGTTCGTTAGATCAT+TGG - chr4_2:62173233-62173252 Msa0613340:CDS 40.0%
!!! TAAGGGCCTTTTTTGTCCTT+AGG - chr4_2:62173391-62173410 Msa0613340:CDS 40.0%
CTAACGCCTAAGGACAAAAA+AGG + chr4_2:62173400-62173419 None:intergenic 40.0%
TGCTTAAGACACTCGGTTAT+CGG + chr4_2:62173578-62173597 None:intergenic 40.0%
GACTACATGCTTAAGACACT+CGG + chr4_2:62173585-62173604 None:intergenic 40.0%
! AAGGGCAAAGTGTTTGAGTA+AGG + chr4_2:62173825-62173844 None:intergenic 40.0%
TGTCATACAAAATACCTCCG+GGG - chr4_2:62173955-62173974 Msa0613340:intron 40.0%
ACTCCCATATTCGAGGAATA+GGG - chr4_2:62174030-62174049 Msa0613340:CDS 40.0%
GACTAAAAAAGGGAAGGACT+TGG + chr4_2:62174075-62174094 None:intergenic 40.0%
GTGAACGTGATGATCTTTAG+AGG + chr4_2:62174227-62174246 None:intergenic 40.0%
CCACAACATATGCACACAAT+AGG + chr4_2:62174348-62174367 None:intergenic 40.0%
CCTATTGTGTGCATATGTTG+TGG - chr4_2:62174345-62174364 Msa0613340:intron 40.0%
ATTGTGTGCATATGTTGTGG+AGG - chr4_2:62174348-62174367 Msa0613340:intron 40.0%
CAATACGCTAGAGACTAGAA+AGG - chr4_2:62174391-62174410 Msa0613340:intron 40.0%
ATGCCTTACCTTGTTAGCAA+TGG - chr4_2:62174457-62174476 Msa0613340:intron 40.0%
CTTCCATTGCTAACAAGGTA+AGG + chr4_2:62174463-62174482 None:intergenic 40.0%
! GGACGCATGAAACAACTTTT+TGG + chr4_2:62175258-62175277 None:intergenic 40.0%
TGCTCTACAAACTTGAACAC+TGG + chr4_2:62175427-62175446 None:intergenic 40.0%
!!! GGCCATTAATTTTTTCTGCC+TGG - chr4_2:62175615-62175634 Msa0613340:intron 40.0%
GATGCAGGGCCTAAAATTAT+CGG - chr4_2:62176015-62176034 Msa0613340:intron 40.0%
GGCCTAAAATTATCGGTGAA+GGG - chr4_2:62176022-62176041 Msa0613340:intron 40.0%
! AGCCCTTCACCGATAATTTT+AGG + chr4_2:62176027-62176046 None:intergenic 40.0%
TTAGGTTCGGAGTGAGGTTT+CGG + chr4_2:62172514-62172533 None:intergenic 45.0%
!! GGGTCATGTTAACTTGTGTC+GGG - chr4_2:62172963-62172982 Msa0613340:intron 45.0%
CCAATTGTGCCACACTATGT+TGG + chr4_2:62173555-62173574 None:intergenic 45.0%
CCAACATAGTGTGGCACAAT+TGG - chr4_2:62173552-62173571 Msa0613340:intron 45.0%
GTAGTCATGTGTTCGATCCA+TGG - chr4_2:62173599-62173618 Msa0613340:CDS 45.0%
AGGTACGGAGATCCACTTAA+GGG + chr4_2:62173664-62173683 None:intergenic 45.0%
GAGACTAATCCTTCGAGGTA+CGG + chr4_2:62173679-62173698 None:intergenic 45.0%
!! GTACCTCGAAGGATTAGTCT+CGG - chr4_2:62173678-62173697 Msa0613340:intron 45.0%
!! TACCTCGAAGGATTAGTCTC+GGG - chr4_2:62173679-62173698 Msa0613340:intron 45.0%
!!! AAGGATTAGTCTCGGGCTTT+TGG - chr4_2:62173686-62173705 Msa0613340:intron 45.0%
GTCATACAAAATACCTCCGG+GGG - chr4_2:62173956-62173975 Msa0613340:intron 45.0%
TCATACAAAATACCTCCGGG+GGG - chr4_2:62173957-62173976 Msa0613340:intron 45.0%
TCAATCAAGCTATGTGGCTG+TGG + chr4_2:62173999-62174018 None:intergenic 45.0%
AGCCACATAGCTTGATTGAG+CGG - chr4_2:62174000-62174019 Msa0613340:CDS 45.0%
ATCCGCTCAATCAAGCTATG+TGG + chr4_2:62174005-62174024 None:intergenic 45.0%
ATCCTTGACTCCCATATTCG+AGG - chr4_2:62174023-62174042 Msa0613340:CDS 45.0%
TTCCTCGAATATGGGAGTCA+AGG + chr4_2:62174028-62174047 None:intergenic 45.0%
GACTCCCATATTCGAGGAAT+AGG - chr4_2:62174029-62174048 Msa0613340:CDS 45.0%
GAGCCCTATTCCTCGAATAT+GGG + chr4_2:62174036-62174055 None:intergenic 45.0%
ACTTGGTCGCATCATGATGT+GGG + chr4_2:62174058-62174077 None:intergenic 45.0%
! AGTCACATGACTGCTGATTG+AGG - chr4_2:62174091-62174110 Msa0613340:intron 45.0%
! GTCACATGACTGCTGATTGA+GGG - chr4_2:62174092-62174111 Msa0613340:intron 45.0%
! TCACATGACTGCTGATTGAG+GGG - chr4_2:62174093-62174112 Msa0613340:intron 45.0%
TATATTAGCTGTGACCGAGG+AGG + chr4_2:62174187-62174206 None:intergenic 45.0%
CATATGTTGTGGAGGTTGAG+AGG - chr4_2:62174356-62174375 Msa0613340:intron 45.0%
!! ACCAAGTTTTAATGGCTGCG+CGG - chr4_2:62174577-62174596 Msa0613340:intron 45.0%
CGAGTACTTCTCCTCATGAT+TGG - chr4_2:62174766-62174785 Msa0613340:intron 45.0%
TGTAGATGAGCCAGGAAAAC+AGG - chr4_2:62174845-62174864 Msa0613340:intron 45.0%
ATGAGCCAGGAAAACAGGTT+AGG - chr4_2:62174850-62174869 Msa0613340:intron 45.0%
! AGAGTATCATAGCAACCGGT+AGG - chr4_2:62175304-62175323 Msa0613340:intron 45.0%
CTGCTCATCAAACTGTTTCC+AGG + chr4_2:62175636-62175655 None:intergenic 45.0%
GTTTGATGAGCAGAAAGACC+AGG - chr4_2:62175643-62175662 Msa0613340:intron 45.0%
GTGGGCGAGACATTCAATAT+AGG - chr4_2:62175832-62175851 Msa0613340:intron 45.0%
GGAAAAATTGAAGCGGCAGT+TGG - chr4_2:62175948-62175967 Msa0613340:intron 45.0%
AGGTTTCTTCCGTGCTTCAA+GGG + chr4_2:62175989-62176008 None:intergenic 45.0%
AAGAAACCTGCAGAAGATGC+AGG - chr4_2:62176000-62176019 Msa0613340:intron 45.0%
AGAAACCTGCAGAAGATGCA+GGG - chr4_2:62176001-62176020 Msa0613340:intron 45.0%
GGGCCTAAAATTATCGGTGA+AGG - chr4_2:62176021-62176040 Msa0613340:intron 45.0%
AAGGGCTTGTCATTGACGAA+TGG - chr4_2:62176040-62176059 Msa0613340:intron 45.0%
AGGGCTTGTCATTGACGAAT+GGG - chr4_2:62176041-62176060 Msa0613340:intron 45.0%
AAGATACCTTGCTAAGCAGC+AGG - chr4_2:62176191-62176210 Msa0613340:CDS 45.0%
AGATACCTTGCTAAGCAGCA+GGG - chr4_2:62176192-62176211 Msa0613340:CDS 45.0%
GTGAAAACTATGTGTGGGTG+TGG - chr4_2:62176355-62176374 Msa0613340:CDS 45.0%
AAACAGAGAGACACCCACCA+TGG - chr4_2:62172477-62172496 Msa0613340:three_prime_UTR 50.0%
GTGAGGTTTCGGTTCAGCTA+CGG + chr4_2:62172503-62172522 None:intergenic 50.0%
GAAACCTCACTCCGAACCTA+AGG - chr4_2:62172513-62172532 Msa0613340:three_prime_UTR 50.0%
CAAACCTTAGGTTCGGAGTG+AGG + chr4_2:62172520-62172539 None:intergenic 50.0%
CTCACTCCGAACCTAAGGTT+TGG - chr4_2:62172518-62172537 Msa0613340:three_prime_UTR 50.0%
AACAGAAGACGACGTCGTGT+TGG + chr4_2:62172587-62172606 None:intergenic 50.0%
GGTACGGAGATCCACTTAAG+GGG + chr4_2:62173663-62173682 None:intergenic 50.0%
GAGGTACGGAGATCCACTTA+AGG + chr4_2:62173665-62173684 None:intergenic 50.0%
!! ATTAGTCTCGGGCTTTTGGC+CGG - chr4_2:62173690-62173709 Msa0613340:intron 50.0%
! TTTTGGCCGGAGGATACCAT+GGG - chr4_2:62173703-62173722 Msa0613340:intron 50.0%
TGGTTACCCATGGTATCCTC+CGG + chr4_2:62173712-62173731 None:intergenic 50.0%
! CCAAAAGCACGGGGTCATAA+GGG + chr4_2:62173843-62173862 None:intergenic 50.0%
! ACCAAAAGCACGGGGTCATA+AGG + chr4_2:62173844-62173863 None:intergenic 50.0%
! TACACAGCACCAAAAGCACG+GGG + chr4_2:62173852-62173871 None:intergenic 50.0%
! GTACACAGCACCAAAAGCAC+GGG + chr4_2:62173853-62173872 None:intergenic 50.0%
GGTACACAGCACCAAAAGCA+CGG + chr4_2:62173854-62173873 None:intergenic 50.0%
CATACAAAATACCTCCGGGG+GGG - chr4_2:62173958-62173977 Msa0613340:intron 50.0%
ATACAAAATACCTCCGGGGG+GGG - chr4_2:62173959-62173978 Msa0613340:intron 50.0%
GGAGCCCTATTCCTCGAATA+TGG + chr4_2:62174037-62174056 None:intergenic 50.0%
! GACTTGGTCGCATCATGATG+TGG + chr4_2:62174059-62174078 None:intergenic 50.0%
AAGTCATTCCGCTTCCTCCT+CGG - chr4_2:62174170-62174189 Msa0613340:intron 50.0%
ACCCTTGCTAAGCACATCGT+TGG - chr4_2:62174265-62174284 Msa0613340:intron 50.0%
GCCAACGATGTGCTTAGCAA+GGG + chr4_2:62174269-62174288 None:intergenic 50.0%
TGCCAACGATGTGCTTAGCA+AGG + chr4_2:62174270-62174289 None:intergenic 50.0%
TGCTAAGCACATCGTTGGCA+TGG - chr4_2:62174270-62174289 Msa0613340:intron 50.0%
TCCGCGCAGCCATTAAAACT+TGG + chr4_2:62174581-62174600 None:intergenic 50.0%
CTCATCTACACAAGACGGAG+AGG + chr4_2:62174835-62174854 None:intergenic 50.0%
CCTGGCTCATCTACACAAGA+CGG + chr4_2:62174840-62174859 None:intergenic 50.0%
! GCACTCCTAACCTGTTTTCC+TGG + chr4_2:62174858-62174877 None:intergenic 50.0%
!! AACAGGTTAGGAGTGCCATC+AGG - chr4_2:62174862-62174881 Msa0613340:intron 50.0%
! AGTTGTTTCATGCGTCCTCC+TGG - chr4_2:62175261-62175280 Msa0613340:intron 50.0%
GTTGCTATGATACTCTCGCC+AGG + chr4_2:62175300-62175319 None:intergenic 50.0%
!! GGCGAGAGTATCATAGCAAC+CGG - chr4_2:62175300-62175319 Msa0613340:intron 50.0%
AATTGATTACGTCCCCGAGC+TGG - chr4_2:62175519-62175538 Msa0613340:intron 50.0%
TGATGAGCAGAAAGACCAGG+TGG - chr4_2:62175646-62175665 Msa0613340:intron 50.0%
AAATCTGCTCAACTGCCACC+TGG + chr4_2:62175664-62175683 None:intergenic 50.0%
CAGGTTTCTTCCGTGCTTCA+AGG + chr4_2:62175990-62176009 None:intergenic 50.0%
TTTCGGTTCAGCTACGGCCA+TGG + chr4_2:62172497-62172516 None:intergenic 55.0%
AGAAGACGACGTCGTGTTGG+TGG + chr4_2:62172584-62172603 None:intergenic 55.0%
CGAACTGAGCTAAGCTCACG+TGG + chr4_2:62173224-62173243 None:intergenic 55.0%
TCTTTCGTACGCAGCAGCCA+TGG + chr4_2:62173619-62173638 None:intergenic 55.0%
GGAGAGGTCATCCCCTTAAG+TGG - chr4_2:62173649-62173668 Msa0613340:CDS 55.0%
AGTGGATCTCCGTACCTCGA+AGG - chr4_2:62173667-62173686 Msa0613340:intron 55.0%
AGCCCGAGACTAATCCTTCG+AGG + chr4_2:62173684-62173703 None:intergenic 55.0%
! CTTTTGGCCGGAGGATACCA+TGG - chr4_2:62173702-62173721 Msa0613340:intron 55.0%
! CCCTTATGACCCCGTGCTTT+TGG - chr4_2:62173840-62173859 Msa0613340:CDS 55.0%
AGCTACCCGAGAAGAGCAGA+CGG - chr4_2:62173907-62173926 Msa0613340:intron 55.0%
CGAATCCGTCTGCTCTTCTC+GGG + chr4_2:62173915-62173934 None:intergenic 55.0%
GCGAATCCGTCTGCTCTTCT+CGG + chr4_2:62173916-62173935 None:intergenic 55.0%
TACAAAATACCTCCGGGGGG+GGG - chr4_2:62173960-62173979 Msa0613340:intron 55.0%
! CATGACTGCTGATTGAGGGG+AGG - chr4_2:62174096-62174115 Msa0613340:intron 55.0%
! ACTGCTGATTGAGGGGAGGT+TGG - chr4_2:62174100-62174119 Msa0613340:intron 55.0%
CCGTCTTGTGTAGATGAGCC+AGG - chr4_2:62174837-62174856 Msa0613340:intron 55.0%
TGATACTCTCGCCAGGTGCA+AGG + chr4_2:62175293-62175312 None:intergenic 55.0%
CTGATGCTGCCCTTGAAGCA+CGG - chr4_2:62175977-62175996 Msa0613340:intron 55.0%
TTAGGCCCTGCATCTTCTGC+AGG + chr4_2:62176009-62176028 None:intergenic 55.0%
GGTTCAGCTACGGCCATGGT+GGG + chr4_2:62172493-62172512 None:intergenic 60.0%
GCTTGAGACGACGTCGTGCT+GGG + chr4_2:62172720-62172739 None:intergenic 60.0%
AGCTTGAGACGACGTCGTGC+TGG + chr4_2:62172721-62172740 None:intergenic 60.0%
! AGCAGACGGATTCGCCACGT+AGG - chr4_2:62173921-62173940 Msa0613340:intron 60.0%
ACAAAATACCTCCGGGGGGG+GGG - chr4_2:62173961-62173980 Msa0613340:intron 60.0%
AGGGGAGGTTGGCGAGAAGA+AGG - chr4_2:62174111-62174130 Msa0613340:intron 60.0%
GGGGAGGTTGGCGAGAAGAA+GGG - chr4_2:62174112-62174131 Msa0613340:intron 60.0%
GGGAGGTTGGCGAGAAGAAG+GGG - chr4_2:62174113-62174132 Msa0613340:intron 60.0%
GGAGGTTGGCGAGAAGAAGG+GGG - chr4_2:62174114-62174133 Msa0613340:intron 60.0%
GAGGTTGGCGAGAAGAAGGG+GGG - chr4_2:62174115-62174134 Msa0613340:intron 60.0%
AGGTTGGCGAGAAGAAGGGG+GGG - chr4_2:62174116-62174135 Msa0613340:intron 60.0%
GAGCTGGCAACGCACGTTGA+GGG - chr4_2:62174138-62174157 Msa0613340:intron 60.0%
TGGCAACGCACGTTGAGGGA+CGG - chr4_2:62174142-62174161 Msa0613340:intron 60.0%
AGCTGTGACCGAGGAGGAAG+CGG + chr4_2:62174181-62174200 None:intergenic 60.0%
GGTGCAAGGATAGCTCCAGG+AGG + chr4_2:62175279-62175298 None:intergenic 60.0%
CCAGGTGCAAGGATAGCTCC+AGG + chr4_2:62175282-62175301 None:intergenic 60.0%
CCTGGAGCTATCCTTGCACC+TGG - chr4_2:62175279-62175298 Msa0613340:intron 60.0%
CTCACAGGACTTGGACGCTC+TGG + chr4_2:62175707-62175726 None:intergenic 60.0%
! CATCGCCCTGCTGCTTAGCA+AGG + chr4_2:62176200-62176219 None:intergenic 60.0%
TGCTAAGCAGCAGGGCGATG+TGG - chr4_2:62176200-62176219 Msa0613340:CDS 60.0%
CGGTTCAGCTACGGCCATGG+TGG + chr4_2:62172494-62172513 None:intergenic 65.0%
! AGTCTCGGGCTTTTGGCCGG+AGG - chr4_2:62173693-62173712 Msa0613340:intron 65.0%
ACGGATTCGCCACGTAGGCG+AGG - chr4_2:62173926-62173945 Msa0613340:intron 65.0%
ACATCCTGGCCTCGCCTACG+TGG + chr4_2:62173938-62173957 None:intergenic 65.0%
CAAAATACCTCCGGGGGGGG+GGG - chr4_2:62173962-62173981 Msa0613340:intron 65.0%
AAAATACCTCCGGGGGGGGG+GGG - chr4_2:62173963-62173982 Msa0613340:intron 65.0%
GGAGCTGGCAACGCACGTTG+AGG - chr4_2:62174137-62174156 Msa0613340:intron 65.0%
TTCGCCACGTAGGCGAGGCC+AGG - chr4_2:62173931-62173950 Msa0613340:intron 70.0%
AAATACCTCCGGGGGGGGGG+GGG - chr4_2:62173964-62173983 Msa0613340:intron 70.0%
GCGAGAAGAAGGGGGGGAGC+TGG - chr4_2:62174122-62174141 Msa0613340:intron 70.0%
AATACCTCCGGGGGGGGGGG+GGG - chr4_2:62173965-62173984 Msa0613340:intron 75.0%
! ATACCTCCGGGGGGGGGGGG+GGG - chr4_2:62173966-62173985 Msa0613340:intron 80.0%
! TACCTCCGGGGGGGGGGGGG+GGG - chr4_2:62173967-62173986 Msa0613340:intron 85.0%
! ACCTCCGGGGGGGGGGGGGG+GGG - chr4_2:62173968-62173987 Msa0613340:intron 90.0%
! CCTCCGGGGGGGGGGGGGGG+GGG - chr4_2:62173969-62173988 Msa0613340:intron 95.0%
! CTCCGGGGGGGGGGGGGGGG+GGG - chr4_2:62173970-62173989 Msa0613340:intron 95.0%
! TCCGGGGGGGGGGGGGGGGG+GGG - chr4_2:62173971-62173990 Msa0613340:intron 95.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 62172370 62176548 62172370 ID=Msa0613340;Name=Msa0613340
chr4_2 mRNA 62172370 62176548 62172370 ID=Msa0613340-mRNA-1;Parent=Msa0613340;Name=Msa0613340-mRNA-1;_AED=0.11;_eAED=0.11;_QI=126|0.85|0.87|1|1|1|8|309|299
chr4_2 exon 62172370 62172741 62172370 ID=Msa0613340-mRNA-1:exon:17021;Parent=Msa0613340-mRNA-1
chr4_2 exon 62172856 62172975 62172856 ID=Msa0613340-mRNA-1:exon:17020;Parent=Msa0613340-mRNA-1
chr4_2 exon 62173197 62173274 62173197 ID=Msa0613340-mRNA-1:exon:17019;Parent=Msa0613340-mRNA-1
chr4_2 exon 62173378 62173490 62173378 ID=Msa0613340-mRNA-1:exon:17018;Parent=Msa0613340-mRNA-1
chr4_2 exon 62173597 62173678 62173597 ID=Msa0613340-mRNA-1:exon:17017;Parent=Msa0613340-mRNA-1
chr4_2 exon 62173763 62173861 62173763 ID=Msa0613340-mRNA-1:exon:17016;Parent=Msa0613340-mRNA-1
chr4_2 exon 62173998 62174068 62173998 ID=Msa0613340-mRNA-1:exon:17015;Parent=Msa0613340-mRNA-1
chr4_2 exon 62176149 62176548 62176149 ID=Msa0613340-mRNA-1:exon:17014;Parent=Msa0613340-mRNA-1
chr4_2 five_prime_UTR 62176423 62176548 62176423 ID=Msa0613340-mRNA-1:five_prime_utr;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62176149 62176422 62176149 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62173998 62174068 62173998 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62173763 62173861 62173763 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62173597 62173678 62173597 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62173378 62173490 62173378 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62173197 62173274 62173197 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62172856 62172975 62172856 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 CDS 62172679 62172741 62172679 ID=Msa0613340-mRNA-1:cds;Parent=Msa0613340-mRNA-1
chr4_2 three_prime_UTR 62172370 62172678 62172370 ID=Msa0613340-mRNA-1:three_prime_utr;Parent=Msa0613340-mRNA-1
Gene Sequence

>Msa0613340

ATGGCCGTAGCTGAACCGAAACCTCACTCCGAACCTAAGGTTTGGAATTTCTTCAAACTTCCTTTTCGCAATTCTAACACTTCTTCCACCAACACGACGTCGTCTTCTGTTAATAACAACCTTCATCATCATCATCATCATAACCCTAACAGTAACACTCCTCTTGAAGGTTCAACTTCACACACTTCAAATTCAGTTTCATCTGTTGCTAGATCGCTTCTCCCAGCACGACGTCGTCTCAAGCTTGATCCTTCTAACAAACTTTACTTTCCTTATGAGCCAGGAAAACAGGTTAGGAGTGCCATCAGGATTAAAAACACCAGTAAATCTAATGTAGCATTTAAGTTTTTGTTGTCGCGGTATGTTGATCGAGTCTCGAACTCACCTGTCTATTCTTACTTTTACTATGTCACTGTTTTGCAGGAAAATTATTCATTTATTATTTTTCAAACAACTGCACCAAAAAGTTGTTTCATGCGTCCTCCTGGAGCTATCCTTGCACCTGGCGAGAGTATCATAGCAACCGTGTTCAAGTTTGTAGAGCAACCAGAAAATAATGAAAAGCCAGAAAAGAGTGGACTCAAATTTAAAATCATGAGTTTGAAGGTCAAAGGTTCAATTGATTACGTCCCCGAGCTGTTTGATGAGCAGAAAGACCAGGTGGCAGTTGAGCAGATTTTGCGCGTTGTTTTTCTAGATCCAGAGCGTCCAAGTCCTATTTTGGAAAAATTGAAGCGGCAGTTGGCTGATGCTGATGCTGCCCTTGAAGCACGGAAGAAACCTGCAGAAGATGCAGGGCCTAAAATTATCGGTGAAGGGCTTGTCATTGACGAATGGAAAGAGAGGAGGGAAAGATACCTTGCTAAGCAGCAGGGCGATGTGGTTGTAGATTCTGTATAG

Protein sequence

>Msa0613340

MAVAEPKPHSEPKVWNFFKLPFRNSNTSSTNTTSSSVNNNLHHHHHHNPNSNTPLEGSTSHTSNSVSSVARSLLPARRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFLLSRYVDRVSNSPVYSYFYYVTVLQENYSFIIFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEARKKPAEDAGPKIIGEGLVIDEWKERRERYLAKQQGDVVVDSV*