AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0454360


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0454360 MtrunA17_Chr3g0100651 95.499 511 21 1 1 511 1 509 0.0 1012
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0454360 AT5G55500.1 58.736 538 183 6 3 511 7 534 0.0 624

Find 151 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCTTACCTATTGTTTAT+TGG 0.193728 3_3:+45621107 Msa0454360:three_prime_UTR
CCAACATGGTGTAAGTTTAA+AGG 0.195735 3_3:-45620218 None:intergenic
TATGAGACTGCTCTCTTTAA+AGG 0.207320 3_3:+45620074 Msa0454360:CDS
AGGTCATGTGAGGGTTATTT+TGG 0.214572 3_3:+45614531 Msa0454360:CDS
TATGTTTCTTCTAGAGTTAC+TGG 0.242168 3_3:+45617979 Msa0454360:CDS
GGCAAAGGGTGGTGAGAGTT+TGG 0.255182 3_3:+45614701 Msa0454360:CDS
CTGAGTTTGGAGAAATGATT+AGG 0.268950 3_3:+45620180 Msa0454360:CDS
GCTCAGTAACCAAACCAATT+TGG 0.274902 3_3:-45620780 None:intergenic
AATTTGGTTGTAGTTATAAA+AGG 0.279021 3_3:-45620764 None:intergenic
ACTGCACGTATTTCTGAGTT+TGG 0.286664 3_3:+45620167 Msa0454360:CDS
TCATGCTATTCTCTCACCTT+TGG 0.294049 3_3:+45620049 Msa0454360:CDS
CCTCATTTGATCTTTGTAGA+TGG 0.301530 3_3:+45618015 Msa0454360:CDS
GCCGAGGAGGAGGGTGGTTT+AGG 0.306773 3_3:+45614601 Msa0454360:CDS
AGCGCATTGATCACAGTTTC+AGG 0.313909 3_3:-45620641 None:intergenic
GAGAGTTTGGGTGATGTTAT+TGG 0.333268 3_3:+45614714 Msa0454360:CDS
TGTTTGAATCCTTGAACAAT+TGG 0.347645 3_3:+45620351 Msa0454360:CDS
AGGTGGGAGGGTGAGGATGG+TGG 0.348275 3_3:+45614662 Msa0454360:CDS
CGCGCCGAAGGCCGAGGAGG+AGG 0.349843 3_3:+45614591 Msa0454360:CDS
CATGCTATTCTCTCACCTTT+GGG 0.353415 3_3:+45620050 Msa0454360:CDS
TGGTTTGGTTACTGAGCTAA+TGG 0.355761 3_3:+45620786 Msa0454360:three_prime_UTR
AGATTATTAGCAGCCAGTTC+AGG 0.373793 3_3:+45620540 Msa0454360:CDS
TGAAGATGAAAAGGAATAGT+AGG 0.379305 3_3:-45614302 None:intergenic
CATACTATGCGTGATTTGAT+TGG 0.386334 3_3:+45614876 Msa0454360:CDS
TAACTACAACCAAATTGGTT+TGG 0.394545 3_3:+45620771 Msa0454360:three_prime_UTR
GAAATGATTAGGGCATCATT+TGG 0.397696 3_3:+45620191 Msa0454360:CDS
GGTGAATATGAGGGTAGAAT+TGG 0.398989 3_3:-45614477 None:intergenic
GGGAAGATGGTTGTTGATGA+GGG 0.401488 3_3:+45614813 Msa0454360:CDS
GGGTGAGGATGGTGGTGGAG+AGG 0.401838 3_3:+45614670 Msa0454360:CDS
AGGAGTTCAGTTTGTGAAGG+TGG 0.404692 3_3:+45614645 Msa0454360:CDS
CTTTGTAGATGGACATTGTA+AGG 0.413446 3_3:+45618026 Msa0454360:CDS
CAAAATGTGGACGCCTGAAC+TGG 0.415856 3_3:-45620553 None:intergenic
TTTGAGGTTGATGGTGGTGT+AGG 0.416547 3_3:+45614780 Msa0454360:CDS
TGAGTTTGGAGAAATGATTA+GGG 0.417162 3_3:+45620181 Msa0454360:CDS
AGAAGGAGTTGAAGATGAAA+AGG 0.418362 3_3:-45614311 None:intergenic
TGAAGGTGGGAGGGTGAGGA+TGG 0.418456 3_3:+45614659 Msa0454360:CDS
GGTGGTGTAGGGTTTGAAAA+GGG 0.418748 3_3:+45614792 Msa0454360:CDS
AAATCATTCCAATAAACAAT+AGG 0.421327 3_3:-45621115 None:intergenic
TCGGGCCGCGCCGAAGGCCG+AGG 0.426699 3_3:+45614585 Msa0454360:CDS
TGGGAGGGTGAGGATGGTGG+TGG 0.427137 3_3:+45614665 Msa0454360:CDS
AAGATCAAATGAGGTCGATT+AGG 0.427580 3_3:-45618006 None:intergenic
GGAGTTCAGTTTGTGAAGGT+GGG 0.429232 3_3:+45614646 Msa0454360:CDS
TGAGGATTTGGTGATGGTGT+AGG 0.429593 3_3:-45614375 None:intergenic
GCGCCGAAGGCCGAGGAGGA+GGG 0.431590 3_3:+45614592 Msa0454360:CDS
CCTTTAAACTTACACCATGT+TGG 0.433548 3_3:+45620218 Msa0454360:CDS
CCACCCTCCTCCTCGGCCTT+CGG 0.434059 3_3:-45614595 None:intergenic
GAAAGAATTTCATTGTGATA+AGG 0.435133 3_3:+45614920 Msa0454360:CDS
AATTGCACAGTTCAGTGAAA+AGG 0.443246 3_3:+45620889 Msa0454360:three_prime_UTR
TTTGTGAAGGTGGGAGGGTG+AGG 0.443601 3_3:+45614655 Msa0454360:CDS
GCAAAGGGTGGTGAGAGTTT+GGG 0.447847 3_3:+45614702 Msa0454360:CDS
ATTAGACGCCCAATTGTTCA+AGG 0.450169 3_3:-45620360 None:intergenic
ATTGGTAAGATGAGGGTTGT+TGG 0.451184 3_3:+45614894 Msa0454360:CDS
GTTTGAATCCTTGAACAATT+GGG 0.451278 3_3:+45620352 Msa0454360:CDS
ATCATTGGTGCACATGGTGC+TGG 0.454404 3_3:+45620473 Msa0454360:CDS
TGGAATTGCTGATAACTTGT+TGG 0.454803 3_3:+45620806 Msa0454360:three_prime_UTR
TTGTGACCATGGTGAATATG+AGG 0.459379 3_3:-45614487 None:intergenic
ATTGCACAGTTCAGTGAAAA+GGG 0.460205 3_3:+45620890 Msa0454360:three_prime_UTR
GAGTTGCCTTTGTTTGATGA+TGG 0.462494 3_3:+45614753 Msa0454360:CDS
GATTGAGGAACCAACACTTA+TGG 0.470869 3_3:+45617900 Msa0454360:CDS
TTGAGGTTGATGGTGGTGTA+GGG 0.470897 3_3:+45614781 Msa0454360:CDS
GAGGAGGGTGGTTTAGGTGT+TGG 0.474037 3_3:+45614607 Msa0454360:CDS
TCTATAAAGGGTCGTCGAAA+AGG 0.476275 3_3:-45614423 None:intergenic
TCTAGACTAGATACTGTGTT+TGG 0.476293 3_3:-45614205 None:intergenic
TTTCTATTTGCAGTGGATTG+AGG 0.477958 3_3:+45617885 Msa0454360:intron
AGGGTTTGAAAAGGGGAAGA+TGG 0.480770 3_3:+45614800 Msa0454360:CDS
ATGAGACTGCTCTCTTTAAA+GGG 0.481297 3_3:+45620075 Msa0454360:CDS
CGTACATTGCACGATGGAAA+GGG 0.486396 3_3:+45620576 Msa0454360:CDS
GAGGATTTGGTGATGGTGTA+GGG 0.486547 3_3:-45614374 None:intergenic
TGGTGGTGTAGGGTTTGAAA+AGG 0.493349 3_3:+45614791 Msa0454360:CDS
AATCTTCACGACGAACAAAC+AGG 0.493940 3_3:-45620268 None:intergenic
GTTCAGTTTGTGAAGGTGGG+AGG 0.494185 3_3:+45614649 Msa0454360:CDS
GGGGAAGATGGTTGTTGATG+AGG 0.494741 3_3:+45614812 Msa0454360:CDS
TGGAAATGGATTCACGCGCT+TGG 0.497077 3_3:+45614551 Msa0454360:CDS
TACTATGTTATTGAGAATTG+AGG 0.498812 3_3:+45621144 Msa0454360:three_prime_UTR
ATTGATCACAGTTTCAGGAT+TGG 0.500211 3_3:-45620636 None:intergenic
ACACATGTCTATGAAGGAAC+AGG 0.501258 3_3:+45620424 Msa0454360:CDS
TTCAGTTTGTGAAGGTGGGA+GGG 0.509183 3_3:+45614650 Msa0454360:CDS
GCGTACATTGCACGATGGAA+AGG 0.510537 3_3:+45620575 Msa0454360:CDS
CATGTTGGAAAACAAGTCTC+TGG 0.512004 3_3:+45620233 Msa0454360:CDS
GTGGTGTAGGGTTTGAAAAG+GGG 0.513805 3_3:+45614793 Msa0454360:CDS
CCTGAGTTGTTGACAGTACC+TGG 0.514675 3_3:+45620954 Msa0454360:three_prime_UTR
CAAGATGCATCTGTGATCAT+TGG 0.514771 3_3:+45620458 Msa0454360:CDS
ATCATGCAATTAACCTTGAC+GGG 0.518602 3_3:+45620606 Msa0454360:CDS
TATCATGCAATTAACCTTGA+CGG 0.531573 3_3:+45620605 Msa0454360:CDS
GGAAGATGGTTGTTGATGAG+GGG 0.541997 3_3:+45614814 Msa0454360:CDS
TGGATAGGTATGTTCCTAGA+GGG 0.542170 3_3:+45614841 Msa0454360:CDS
ATTCCAATAAACAATAGGTA+AGG 0.542952 3_3:-45621110 None:intergenic
GGTGTAGGGTTGAGAAAAGA+AGG 0.544632 3_3:-45614360 None:intergenic
GTCTATGAAGGAACAGGTAC+GGG 0.547167 3_3:+45620430 Msa0454360:CDS
GTAAGATGAGGGTTGTTGGA+AGG 0.551093 3_3:+45614898 Msa0454360:CDS
GCTTTCCATGTCTCTTCAAG+TGG 0.551230 3_3:-45619972 None:intergenic
CGTGCAATGTACGCAAAATG+TGG 0.553471 3_3:-45620566 None:intergenic
ACAGTACCTGGTGCAGTATG+TGG 0.556223 3_3:+45620966 Msa0454360:three_prime_UTR
TGCTCTCTTTAAAGGGCTAA+CGG 0.556353 3_3:+45620082 Msa0454360:CDS
CCCTATGTTGTATACAGATG+AGG 0.560136 3_3:+45621014 Msa0454360:three_prime_UTR
CCCTCATCTGTATACAACAT+AGG 0.561482 3_3:-45621015 None:intergenic
AGGCTCCACTTGAAGAGACA+TGG 0.565654 3_3:+45619967 Msa0454360:intron
TGTAAAATCAACCTTGTCAA+CGG 0.566032 3_3:+45620392 Msa0454360:CDS
ATTCAAATTCAACTACACTA+AGG 0.566417 3_3:+45614511 Msa0454360:CDS
GTTCGCACACATGTCTATGA+AGG 0.570162 3_3:+45620418 Msa0454360:CDS
GTTGGTATAGTGAGACATTG+AGG 0.570310 3_3:+45614625 Msa0454360:CDS
ATGACGAAAACATACTGTTC+CGG 0.573877 3_3:-45620030 None:intergenic
CCTCATCTGTATACAACATA+GGG 0.574738 3_3:-45621014 None:intergenic
AAGCGTGTCACCATAAGTGT+TGG 0.575433 3_3:-45617910 None:intergenic
TGATTTGATTGGTAAGATGA+GGG 0.575711 3_3:+45614887 Msa0454360:CDS
CCTATGTTGTATACAGATGA+GGG 0.575785 3_3:+45621015 Msa0454360:three_prime_UTR
TGTCTCATAATCTCCCCTCT+AGG 0.575999 3_3:-45614855 None:intergenic
GAGCTTCTGCACAAGAATTG+TGG 0.576797 3_3:+45620123 Msa0454360:CDS
TTGATGTGAGGATTTGGTGA+TGG 0.577465 3_3:-45614381 None:intergenic
TCTGTGATCATTGGTGCACA+TGG 0.577485 3_3:+45620467 Msa0454360:CDS
TGTCTATGAAGGAACAGGTA+CGG 0.577933 3_3:+45620429 Msa0454360:CDS
TTGAGGAGTTCAGTTTGTGA+AGG 0.578440 3_3:+45614642 Msa0454360:CDS
GAAGTAAAGACAGAGAGAGA+AGG 0.581161 3_3:-45614328 None:intergenic
ACCTAAACCACCCTCCTCCT+CGG 0.582699 3_3:-45614602 None:intergenic
GAGAGAAGCTATGAACAAGA+AGG 0.584165 3_3:+45614272 Msa0454360:intron
TATTTCACACTGTTACAGAC+TGG 0.585008 3_3:+45617947 Msa0454360:CDS
TAGGGTCAAGGATCAAATGA+AGG 0.587118 3_3:-45620996 None:intergenic
TTCAAAACAGTCAACATCGA+AGG 0.588373 3_3:-45620682 None:intergenic
TGAAACTGTGATCAATGCGC+TGG 0.590693 3_3:+45620643 Msa0454360:CDS
CCGAAGGCCGAGGAGGAGGG+TGG 0.592781 3_3:+45614595 Msa0454360:CDS
TATTGGAAGAAGTGAAGATG+AGG 0.597411 3_3:+45614731 Msa0454360:CDS
ATTGGGCGTCTAATTACAAA+GGG 0.597941 3_3:+45620369 Msa0454360:CDS
CTGTATACAACATAGGGTCA+AGG 0.601987 3_3:-45621008 None:intergenic
AACTACACTAAGGTCATGTG+AGG 0.602112 3_3:+45614521 Msa0454360:CDS
AATTGGGCGTCTAATTACAA+AGG 0.606833 3_3:+45620368 Msa0454360:CDS
GGCCGCGCCGAAGGCCGAGG+AGG 0.607252 3_3:+45614588 Msa0454360:CDS
CCATCTACAAAGATCAAATG+AGG 0.608402 3_3:-45618015 None:intergenic
TATGAGGGTAGAATTGGCCA+TGG 0.609270 3_3:-45614471 None:intergenic
CATTGCACGATGGAAAGGGT+TGG 0.612182 3_3:+45620580 Msa0454360:CDS
AAACCCATATCTTAAAACCA+TGG 0.613317 3_3:+45614454 Msa0454360:CDS
AACATGCCACATACTGCACC+AGG 0.613734 3_3:-45620972 None:intergenic
GATTGGCATACGACCCGTCA+AGG 0.614488 3_3:-45620619 None:intergenic
TTGGATAGGTATGTTCCTAG+AGG 0.621449 3_3:+45614840 Msa0454360:CDS
GGATAGGTATGTTCCTAGAG+GGG 0.624351 3_3:+45614842 Msa0454360:CDS
CCAGGTACTGTCAACAACTC+AGG 0.627793 3_3:-45620954 None:intergenic
TTGCACAGTTCAGTGAAAAG+GGG 0.641151 3_3:+45620891 Msa0454360:three_prime_UTR
GTGATTTGATTGGTAAGATG+AGG 0.642742 3_3:+45614886 Msa0454360:CDS
GTGTAGGGTTGAGAAAAGAA+GGG 0.643374 3_3:-45614359 None:intergenic
TATTTAGCTCATCCACGTCA+CGG 0.643939 3_3:+45620290 Msa0454360:CDS
TAGGGTTGAGAAAAGAAGGG+TGG 0.644635 3_3:-45614356 None:intergenic
TGTGACCATGGTGAATATGA+GGG 0.649100 3_3:-45614486 None:intergenic
CTCCTCCTCGGCCTTCGGCG+CGG 0.664642 3_3:-45614590 None:intergenic
AAAGCACCATCATCAAACAA+AGG 0.670848 3_3:-45614759 None:intergenic
GTTGGAAAACAAGTCTCTGG+AGG 0.675946 3_3:+45620236 Msa0454360:CDS
TAGTTATAAAAGGTTAAACA+CGG 0.684633 3_3:-45620754 None:intergenic
TTCTACCCTCATATTCACCA+TGG 0.687731 3_3:+45614481 Msa0454360:CDS
GTGCGAACAATCCGTTGACA+AGG 0.692298 3_3:-45620403 None:intergenic
AGAGCAGTCTCATATCCCAA+AGG 0.695123 3_3:-45620065 None:intergenic
CTATGTTGTATACAGATGAG+GGG 0.717407 3_3:+45621016 Msa0454360:three_prime_UTR
ACTACACTAAGGTCATGTGA+GGG 0.728956 3_3:+45614522 Msa0454360:CDS
TTAGCTCATCCACGTCACGG+TGG 0.740259 3_3:+45620293 Msa0454360:CDS
TGAATCGAGACTAAGTAACG+AGG 0.772914 3_3:+45620322 Msa0454360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAAACCATAAA+TGG - chr3_3:45615624-45615643 None:intergenic 10.0%
!!! TTTTATTTTATTTTGGATTT+TGG + chr3_3:45615637-45615656 Msa0454360:intron 10.0%
!!! ATTAAGATATTTGTTATTTA+TGG + chr3_3:45616060-45616079 Msa0454360:intron 10.0%
!!! GGTTTTTTTATTAAAAATTT+GGG + chr3_3:45617124-45617143 Msa0454360:intron 10.0%
!!! GTTTTTTTATTAAAAATTTG+GGG + chr3_3:45617125-45617144 Msa0454360:intron 10.0%
!!! TTTTTTTATTAAAAATTTGG+GGG + chr3_3:45617126-45617145 Msa0454360:intron 10.0%
!!! TTTAACTTAATTTTATGTTT+TGG - chr3_3:45617728-45617747 None:intergenic 10.0%
!! AAAACATAAAATTAAGTTAA+AGG + chr3_3:45617727-45617746 Msa0454360:intron 10.0%
!!! TATTACATTATTTTATATCA+AGG - chr3_3:45617812-45617831 None:intergenic 10.0%
!! TAACAAAAAATCATTTAAAA+AGG - chr3_3:45618192-45618211 None:intergenic 10.0%
!! AGTTTATGAATTAAATTCAT+TGG + chr3_3:45615517-45615536 Msa0454360:intron 15.0%
!!! TAATTTTGATTATTCTGAAA+TGG + chr3_3:45616168-45616187 Msa0454360:intron 15.0%
!!! AAATTAGTTTCTTTTTTAAG+AGG + chr3_3:45616214-45616233 Msa0454360:intron 15.0%
!!! ACTTTAATTTAAGGATAATA+TGG + chr3_3:45616680-45616699 Msa0454360:intron 15.0%
!!! CTTTAATTTAAGGATAATAT+GGG + chr3_3:45616681-45616700 Msa0454360:intron 15.0%
!!! TTTAATTTAAGGATAATATG+GGG + chr3_3:45616682-45616701 Msa0454360:intron 15.0%
!!! GGGTTTTTTTATTAAAAATT+TGG + chr3_3:45617123-45617142 Msa0454360:intron 15.0%
!! TTTAATTGAAACACAAAAAA+AGG + chr3_3:45617442-45617461 Msa0454360:intron 15.0%
!! TTAATTGAAACACAAAAAAA+GGG + chr3_3:45617443-45617462 Msa0454360:intron 15.0%
!!! AGTTTTTTATTTTATTTCTG+AGG - chr3_3:45617702-45617721 None:intergenic 15.0%
!!! AGTTTTGATTTCAATATATT+TGG - chr3_3:45618234-45618253 None:intergenic 15.0%
!!! AATAACTAATTTTCATAATG+AGG - chr3_3:45618346-45618365 None:intergenic 15.0%
!! AAATTAGTTATTATTCATGT+TGG + chr3_3:45618354-45618373 Msa0454360:intron 15.0%
!! AATTAGTATAATGACTTATT+TGG - chr3_3:45618619-45618638 None:intergenic 15.0%
!! TTATTAGAAAGAAAGAAAAA+AGG - chr3_3:45619187-45619206 None:intergenic 15.0%
!! CAAAAACAAAACAAAATATT+GGG - chr3_3:45621043-45621062 None:intergenic 15.0%
!! ACAAAAACAAAACAAAATAT+TGG - chr3_3:45621044-45621063 None:intergenic 15.0%
!!! AGTTTTTGAATTTGATAGTT+TGG + chr3_3:45614981-45615000 Msa0454360:intron 20.0%
!!! GTTTTTGAATTTGATAGTTT+GGG + chr3_3:45614982-45615001 Msa0454360:intron 20.0%
!!! AGATTGTTTTTATGTTATGA+CGG + chr3_3:45615128-45615147 Msa0454360:intron 20.0%
!! TTTGTGATGAAATCAAATTA+AGG + chr3_3:45615251-45615270 Msa0454360:intron 20.0%
!! AGTCTAATTGTTTATATGAT+CGG + chr3_3:45615861-45615880 Msa0454360:intron 20.0%
!!! AATAGGATATTTGTTGTTTA+TGG + chr3_3:45616019-45616038 Msa0454360:intron 20.0%
!! AATGAAAACAATTAAGAGAT+TGG + chr3_3:45616368-45616387 Msa0454360:intron 20.0%
!! ATAGAATGTAACTACATTTA+TGG - chr3_3:45616511-45616530 None:intergenic 20.0%
!! TATGTTAAATAACACTTATG+TGG + chr3_3:45616611-45616630 Msa0454360:intron 20.0%
!!! AGGACTAAAACTTTAATTTA+AGG + chr3_3:45616671-45616690 Msa0454360:intron 20.0%
!!! TTGTCTAGAACTAAATTTAT+AGG - chr3_3:45616781-45616800 None:intergenic 20.0%
!!! TTTTTCTTTCTTTCTAGATA+TGG - chr3_3:45616855-45616874 None:intergenic 20.0%
!! CTAGAAAGAAAGAAAAAAAA+TGG + chr3_3:45616858-45616877 Msa0454360:intron 20.0%
!! ATAATAATCACATGTGTTAT+TGG + chr3_3:45617390-45617409 Msa0454360:intron 20.0%
!! TCAATTAAAAAAATCCTATG+TGG - chr3_3:45617431-45617450 None:intergenic 20.0%
!! ATAATCCTTTATGTTACAAA+AGG - chr3_3:45617482-45617501 None:intergenic 20.0%
!! CTATATATTACGAAAGATTT+GGG - chr3_3:45617675-45617694 None:intergenic 20.0%
!! CTCATTATGAAATATGAAAA+TGG + chr3_3:45618122-45618141 Msa0454360:intron 20.0%
!!! AAAATGTAGCATAATTTTGA+GGG - chr3_3:45619048-45619067 None:intergenic 20.0%
!! AAAATGTAGCATAATATTGA+GGG - chr3_3:45619148-45619167 None:intergenic 20.0%
!! TAAAATGTAGCATAATATTG+AGG - chr3_3:45619149-45619168 None:intergenic 20.0%
!! GAATGATAATAGATATTCAT+TGG + chr3_3:45619255-45619274 Msa0454360:intron 20.0%
!!! TTTTCATAATTTTCTTCCAT+TGG + chr3_3:45619446-45619465 Msa0454360:intron 20.0%
!!! AGGGTATTAATTTTTCATTT+AGG + chr3_3:45619545-45619564 Msa0454360:intron 20.0%
!!! GGGTATTAATTTTTCATTTA+GGG + chr3_3:45619546-45619565 Msa0454360:intron 20.0%
!!! TTTTTTTGATGTCCATATTA+GGG - chr3_3:45619575-45619594 None:intergenic 20.0%
!!! ATTTTTTTGATGTCCATATT+AGG - chr3_3:45619576-45619595 None:intergenic 20.0%
!! TAATATGGACATCAAAAAAA+TGG + chr3_3:45619575-45619594 Msa0454360:intron 20.0%
!! AATATGGACATCAAAAAAAT+GGG + chr3_3:45619576-45619595 Msa0454360:intron 20.0%
!!! TATTTTACTAAAAATTGTGG+GGG - chr3_3:45619614-45619633 None:intergenic 20.0%
!!! GTATTTTACTAAAAATTGTG+GGG - chr3_3:45619615-45619634 None:intergenic 20.0%
!!! GGTATTTTACTAAAAATTGT+GGG - chr3_3:45619616-45619635 None:intergenic 20.0%
!! TCAAAAAAATAAACGGAAAA+AGG - chr3_3:45619642-45619661 None:intergenic 20.0%
!!! ATTATTACCCTTATTTCTTA+GGG - chr3_3:45619739-45619758 None:intergenic 20.0%
!!! AATTATTACCCTTATTTCTT+AGG - chr3_3:45619740-45619759 None:intergenic 20.0%
!! TCTGTATATATAATGTTTGA+AGG - chr3_3:45619870-45619889 None:intergenic 20.0%
!! TAGTTATAAAAGGTTAAACA+CGG - chr3_3:45620757-45620776 None:intergenic 20.0%
!! AATTTGGTTGTAGTTATAAA+AGG - chr3_3:45620767-45620786 None:intergenic 20.0%
!!! TTTTATAACTACAACCAAAT+TGG + chr3_3:45620766-45620785 Msa0454360:three_prime_UTR 20.0%
!! AAATCATTCCAATAAACAAT+AGG - chr3_3:45621118-45621137 None:intergenic 20.0%
!!! AAAATTTTGATGTGAGGATT+TGG - chr3_3:45614390-45614409 None:intergenic 25.0%
!!! TTAGTGAAAATTTTGATGTG+AGG - chr3_3:45614396-45614415 None:intergenic 25.0%
!! GTTTTGTGTTTCTCTATAAA+GGG - chr3_3:45614438-45614457 None:intergenic 25.0%
! ATTCAAATTCAACTACACTA+AGG + chr3_3:45614511-45614530 Msa0454360:CDS 25.0%
! GAAAGAATTTCATTGTGATA+AGG + chr3_3:45614920-45614939 Msa0454360:CDS 25.0%
! AATTTCATTGTGATAAGGTA+AGG + chr3_3:45614925-45614944 Msa0454360:intron 25.0%
!! TCGAGATTAATTTTCATACA+CGG + chr3_3:45615026-45615045 Msa0454360:intron 25.0%
!!! AGTTTTTTACTTTGATCAGT+TGG + chr3_3:45615342-45615361 Msa0454360:intron 25.0%
!!! GTTTTTTACTTTGATCAGTT+GGG + chr3_3:45615343-45615362 Msa0454360:intron 25.0%
!! TAAATTCATTGGTTAGTTGT+TGG + chr3_3:45615528-45615547 Msa0454360:intron 25.0%
!! AAATTCATTGGTTAGTTGTT+GGG + chr3_3:45615529-45615548 Msa0454360:intron 25.0%
!!! TACTTTTCAAGTCATACATA+TGG - chr3_3:45615830-45615849 None:intergenic 25.0%
!!! TTAGTTTCTTTTTTAAGAGG+TGG + chr3_3:45616217-45616236 Msa0454360:intron 25.0%
!!! TAGTTTCTTTTTTAAGAGGT+GGG + chr3_3:45616218-45616237 Msa0454360:intron 25.0%
! TTGGTGAATGAAATTATGAA+AGG + chr3_3:45616290-45616309 Msa0454360:intron 25.0%
! GAGAATTTAATGTAACAGTT+AGG + chr3_3:45616315-45616334 Msa0454360:intron 25.0%
! AAAACAATTAAGAGATTGGA+GGG + chr3_3:45616372-45616391 Msa0454360:intron 25.0%
!!! ATTTAGTTCTAGACAAGAAT+TGG + chr3_3:45616785-45616804 Msa0454360:intron 25.0%
!!! TTTAGTTCTAGACAAGAATT+GGG + chr3_3:45616786-45616805 Msa0454360:intron 25.0%
!!! GTTTTGAAGAGGATATTTTT+GGG - chr3_3:45616924-45616943 None:intergenic 25.0%
!!! ATATTTTTTCTCGGTTTTCT+GGG - chr3_3:45616946-45616965 None:intergenic 25.0%
!!! AATATTTTTTCTCGGTTTTC+TGG - chr3_3:45616947-45616966 None:intergenic 25.0%
!! TAGAATTTTCATTCGTACAA+TGG - chr3_3:45617225-45617244 None:intergenic 25.0%
!!! TTTTTTATTCTCCCTTTTCT+GGG - chr3_3:45617312-45617331 None:intergenic 25.0%
! AGGGAGAATAAAAAACAATT+AGG + chr3_3:45617317-45617336 Msa0454360:intron 25.0%
! GGGAGAATAAAAAACAATTA+GGG + chr3_3:45617318-45617337 Msa0454360:intron 25.0%
! TAACACATGTGATTATTATG+TGG - chr3_3:45617389-45617408 None:intergenic 25.0%
!! AATACAATAACACTCCTTTT+TGG - chr3_3:45617601-45617620 None:intergenic 25.0%
! GCTATATATTACGAAAGATT+TGG - chr3_3:45617676-45617695 None:intergenic 25.0%
! AAAATTAAGTTAAAGGACTC+TGG + chr3_3:45617734-45617753 Msa0454360:intron 25.0%
! AAATTAAGTTAAAGGACTCT+GGG + chr3_3:45617735-45617754 Msa0454360:intron 25.0%
! ACAATTGAATAACAAAACAG+AGG - chr3_3:45617782-45617801 None:intergenic 25.0%
!!! GTAAGAAATAGGGTTTTTTA+GGG + chr3_3:45618909-45618928 Msa0454360:intron 25.0%
!!! TAAGAAATAGGGTTTTTTAG+GGG + chr3_3:45618910-45618929 Msa0454360:intron 25.0%
!!! TTTTTTAGGGGTAAAATTGT+GGG + chr3_3:45618922-45618941 Msa0454360:intron 25.0%
! TAGAGTGATTTAAATGAACT+GGG + chr3_3:45618945-45618964 Msa0454360:intron 25.0%
!! CAAAATGTAGCATAATTTTG+AGG - chr3_3:45619049-45619068 None:intergenic 25.0%
!! CTCAAAATTATGCTACATTT+TGG + chr3_3:45619047-45619066 Msa0454360:intron 25.0%
!! AAATGGCAACATAATTTTGA+GGG - chr3_3:45619088-45619107 None:intergenic 25.0%
!! AAAATTATGTTGCCATTTGT+AGG + chr3_3:45619090-45619109 Msa0454360:intron 25.0%
!! TTCTTATTTGCTACATTTGA+TGG - chr3_3:45619232-45619251 None:intergenic 25.0%
! TGATAATAGATATTCATTGG+TGG + chr3_3:45619258-45619277 Msa0454360:intron 25.0%
!!! AAATGGAAGTTTGTTTTGTT+AGG + chr3_3:45619525-45619544 Msa0454360:intron 25.0%
!!! AATGGAAGTTTGTTTTGTTA+GGG + chr3_3:45619526-45619545 Msa0454360:intron 25.0%
!! CGGTATTTTACTAAAAATTG+TGG - chr3_3:45619617-45619636 None:intergenic 25.0%
! GGAATCGTCAAAAAAATAAA+CGG - chr3_3:45619649-45619668 None:intergenic 25.0%
!!! ACCATTTTTAGTAAAATGGT+GGG - chr3_3:45619670-45619689 None:intergenic 25.0%
!! ACCATTTTACTAAAAATGGT+GGG + chr3_3:45619670-45619689 Msa0454360:intron 25.0%
!! AGTTTCTTCCAATATTTTTC+AGG + chr3_3:45619947-45619966 Msa0454360:intron 25.0%
! ATTCCTTACCTATTGTTTAT+TGG + chr3_3:45621107-45621126 Msa0454360:three_prime_UTR 25.0%
! ATTCCAATAAACAATAGGTA+AGG - chr3_3:45621113-45621132 None:intergenic 25.0%
! TACTATGTTATTGAGAATTG+AGG + chr3_3:45621144-45621163 Msa0454360:three_prime_UTR 25.0%
TGAAGATGAAAAGGAATAGT+AGG - chr3_3:45614305-45614324 None:intergenic 30.0%
!! GGTTTTGTGTTTCTCTATAA+AGG - chr3_3:45614439-45614458 None:intergenic 30.0%
AAACCCATATCTTAAAACCA+TGG + chr3_3:45614454-45614473 Msa0454360:CDS 30.0%
! GAATTTGAATTTTGTGACCA+TGG - chr3_3:45614501-45614520 None:intergenic 30.0%
TGATTTGATTGGTAAGATGA+GGG + chr3_3:45614887-45614906 Msa0454360:CDS 30.0%
!! GATAGTTTGGGTTGTTATTA+TGG + chr3_3:45614994-45615013 Msa0454360:intron 30.0%
! TGGGTTGTTATTATGGTTAT+CGG + chr3_3:45615001-45615020 Msa0454360:intron 30.0%
! GATTAATTTTCATACACGGT+CGG + chr3_3:45615030-45615049 Msa0454360:intron 30.0%
TGACGGTTATGATTATTTGA+CGG + chr3_3:45615145-45615164 Msa0454360:intron 30.0%
! AATTCATTGGTTAGTTGTTG+CGG + chr3_3:45615189-45615208 Msa0454360:intron 30.0%
AATTTGATTGTGATCAAGTG+AGG + chr3_3:45615278-45615297 Msa0454360:intron 30.0%
! AATTCATTGGTTAGTTGTTG+GGG + chr3_3:45615189-45615208 Msa0454360:intron 30.0%
!! TGTTGTCAGGTTTAGAATTT+TGG + chr3_3:45615563-45615582 Msa0454360:intron 30.0%
CTTGTGATGAAATCAAACTT+AGG + chr3_3:45615592-45615611 Msa0454360:intron 30.0%
! ACTTAGGTATTTGCCATTTA+TGG + chr3_3:45615608-45615627 Msa0454360:intron 30.0%
AGTTTATGAGTTTGATCAGT+TGG + chr3_3:45615727-45615746 Msa0454360:intron 30.0%
GTTTATGAGTTTGATCAGTT+GGG + chr3_3:45615728-45615747 Msa0454360:intron 30.0%
! TGGAGATTAATTTTCATCCA+CGG + chr3_3:45615763-45615782 Msa0454360:intron 30.0%
CATGTATGAATTCAATTCTC+TGG + chr3_3:45615929-45615948 Msa0454360:intron 30.0%
GCTTGTGATGAAATTGAAAT+AGG + chr3_3:45616002-45616021 Msa0454360:intron 30.0%
TGAAGTTTAAGAGATGTTGA+TGG + chr3_3:45616138-45616157 Msa0454360:intron 30.0%
GAAAACAATTAAGAGATTGG+AGG + chr3_3:45616371-45616390 Msa0454360:intron 30.0%
! GATGAGAAATTTTCCAAAAC+AGG + chr3_3:45616409-45616428 Msa0454360:intron 30.0%
TGTTTGATTCCTTTATACAC+AGG - chr3_3:45616439-45616458 None:intergenic 30.0%
!! GTTACCTCAACTTATTTTCA+AGG + chr3_3:45616547-45616566 Msa0454360:intron 30.0%
!! CTCAACTTATTTTCAAGGTT+CGG + chr3_3:45616552-45616571 Msa0454360:intron 30.0%
AGAAACTCGAAAAAGTTTCA+GGG - chr3_3:45616584-45616603 None:intergenic 30.0%
TAGAAACTCGAAAAAGTTTC+AGG - chr3_3:45616585-45616604 None:intergenic 30.0%
CTTTCTAGATATGGATTTCT+AGG - chr3_3:45616846-45616865 None:intergenic 30.0%
AGGAACTAATCTTATTCCTA+GGG - chr3_3:45616893-45616912 None:intergenic 30.0%
AAGGAACTAATCTTATTCCT+AGG - chr3_3:45616894-45616913 None:intergenic 30.0%
!!! GATATTTTTGGGTCTTGAAA+AGG - chr3_3:45616913-45616932 None:intergenic 30.0%
!!! GGTTTTGAAGAGGATATTTT+TGG - chr3_3:45616925-45616944 None:intergenic 30.0%
!! CATTTTGAAAATGAGAGTGA+TGG - chr3_3:45617040-45617059 None:intergenic 30.0%
!!! GTTTTTTATTCTCCCTTTTC+TGG - chr3_3:45617313-45617332 None:intergenic 30.0%
ATTAGGGTTTAATTGCAAGA+TGG + chr3_3:45617334-45617353 Msa0454360:intron 30.0%
AAACACAAAAAAAGGGTCAA+TGG + chr3_3:45617450-45617469 Msa0454360:intron 30.0%
! GCAATCCTTTTGTAACATAA+AGG + chr3_3:45617474-45617493 Msa0454360:intron 30.0%
ATAGTAAGTATCTGTGTAAC+TGG + chr3_3:45617554-45617573 Msa0454360:intron 30.0%
!! TATGTTTCTTCTAGAGTTAC+TGG + chr3_3:45617979-45617998 Msa0454360:CDS 30.0%
GAAATCAAAACTCTACAGTA+AGG + chr3_3:45618242-45618261 Msa0454360:intron 30.0%
TTCAATGATCCTTTCCTAAT+CGG - chr3_3:45618278-45618297 None:intergenic 30.0%
AACGTAGTAGAATCATAACA+AGG + chr3_3:45618435-45618454 Msa0454360:intron 30.0%
TTTGGATGTTATGCAACTTA+TGG - chr3_3:45618601-45618620 None:intergenic 30.0%
!!! CGTAAGAAATAGGGTTTTTT+AGG + chr3_3:45618908-45618927 Msa0454360:intron 30.0%
!!! GTTTTTTAGGGGTAAAATTG+TGG + chr3_3:45618921-45618940 Msa0454360:intron 30.0%
GTAGAGTGATTTAAATGAAC+TGG + chr3_3:45618944-45618963 Msa0454360:intron 30.0%
!!! AATTATGCTACATTTTGGCT+AGG + chr3_3:45619052-45619071 Msa0454360:intron 30.0%
!!! ATTATGCTACATTTTGGCTA+GGG + chr3_3:45619053-45619072 Msa0454360:intron 30.0%
! CAAATGGCAACATAATTTTG+AGG - chr3_3:45619089-45619108 None:intergenic 30.0%
! TAGATATTCATTGGTGGTAT+AGG + chr3_3:45619264-45619283 Msa0454360:intron 30.0%
AAAATAAACGGAAAAAGGTG+CGG - chr3_3:45619637-45619656 None:intergenic 30.0%
! TCCCACCATTTTACTAAAAA+TGG + chr3_3:45619666-45619685 Msa0454360:intron 30.0%
!!! CACCATTTTTAGTAAAATGG+TGG - chr3_3:45619671-45619690 None:intergenic 30.0%
! CACCATTTTACTAAAAATGG+TGG + chr3_3:45619669-45619688 Msa0454360:intron 30.0%
! CCATTTTACTAAAAATGGTG+GGG + chr3_3:45619671-45619690 Msa0454360:intron 30.0%
! CATTTTACTAAAAATGGTGG+GGG + chr3_3:45619672-45619691 Msa0454360:intron 30.0%
TAATGTGGACATAAGAAAAG+GGG - chr3_3:45619710-45619729 None:intergenic 30.0%
CTAATGTGGACATAAGAAAA+GGG - chr3_3:45619711-45619730 None:intergenic 30.0%
! CTTTTCTTATGTCCACATTA+GGG + chr3_3:45619710-45619729 Msa0454360:intron 30.0%
! TTTTCTTATGTCCACATTAG+GGG + chr3_3:45619711-45619730 Msa0454360:intron 30.0%
TTGTGATTAATCTGTAGTTG+TGG + chr3_3:45619789-45619808 Msa0454360:intron 30.0%
! TTAATCTGTAGTTGTGGTTT+TGG + chr3_3:45619795-45619814 Msa0454360:intron 30.0%
AGATATGCTAAAAACTTCAC+CGG + chr3_3:45620011-45620030 Msa0454360:CDS 30.0%
! ACGGAAGATATATTTTGCAA+CGG + chr3_3:45620101-45620120 Msa0454360:CDS 30.0%
TGAGTTTGGAGAAATGATTA+GGG + chr3_3:45620181-45620200 Msa0454360:CDS 30.0%
TGTTTGAATCCTTGAACAAT+TGG + chr3_3:45620351-45620370 Msa0454360:CDS 30.0%
GTTTGAATCCTTGAACAATT+GGG + chr3_3:45620352-45620371 Msa0454360:CDS 30.0%
TGTAAAATCAACCTTGTCAA+CGG + chr3_3:45620392-45620411 Msa0454360:CDS 30.0%
!!! ATCTCTAGAATCACAGTTTT+AGG - chr3_3:45620524-45620543 None:intergenic 30.0%
TATCATGCAATTAACCTTGA+CGG + chr3_3:45620605-45620624 Msa0454360:CDS 30.0%
TAACTACAACCAAATTGGTT+TGG + chr3_3:45620771-45620790 Msa0454360:three_prime_UTR 30.0%
! CAATTTTCTTCAGTTGAACA+TGG - chr3_3:45620874-45620893 None:intergenic 30.0%
TCTAGACTAGATACTGTGTT+TGG - chr3_3:45614208-45614227 None:intergenic 35.0%
AGAAGGAGTTGAAGATGAAA+AGG - chr3_3:45614314-45614333 None:intergenic 35.0%
!!! TGGCCATGGTTTTAAGATAT+GGG - chr3_3:45614460-45614479 None:intergenic 35.0%
!!! TTGGCCATGGTTTTAAGATA+TGG - chr3_3:45614461-45614480 None:intergenic 35.0%
!!! TGTGAGGGTTATTTTGGAAA+TGG + chr3_3:45614537-45614556 Msa0454360:CDS 35.0%
GAGAGGATAAAAATGGCAAA+GGG + chr3_3:45614687-45614706 Msa0454360:CDS 35.0%
TATTGGAAGAAGTGAAGATG+AGG + chr3_3:45614731-45614750 Msa0454360:CDS 35.0%
! AAAGCACCATCATCAAACAA+AGG - chr3_3:45614762-45614781 None:intergenic 35.0%
CATACTATGCGTGATTTGAT+TGG + chr3_3:45614876-45614895 Msa0454360:CDS 35.0%
GTGATTTGATTGGTAAGATG+AGG + chr3_3:45614886-45614905 Msa0454360:CDS 35.0%
GTTGCACGAATTGAATTCAT+TGG + chr3_3:45615176-45615195 Msa0454360:intron 35.0%
! ATTCATTGGTTAGTTGTTGC+GGG + chr3_3:45615190-45615209 Msa0454360:intron 35.0%
ATTGTGATCAAGTGAGGTTT+AGG + chr3_3:45615284-45615303 Msa0454360:intron 35.0%
TTTGATCAGTTGGGTGTTTA+TGG + chr3_3:45615352-45615371 Msa0454360:intron 35.0%
!! GGAGTTTAATTTTCATACGC+TGG + chr3_3:45615385-45615404 Msa0454360:intron 35.0%
! TTTGGAATTTGCTTCTGATC+AGG + chr3_3:45615655-45615674 Msa0454360:intron 35.0%
! GATTAATTTTCATCCACGGT+CGG + chr3_3:45615767-45615786 Msa0454360:intron 35.0%
! AATTCTCTGGTTAGTTGTTG+TGG + chr3_3:45615942-45615961 Msa0454360:intron 35.0%
! TTGATTTTCGAATCAGTGCT+TGG + chr3_3:45616097-45616116 Msa0454360:intron 35.0%
!!! TTTCTTTTTTAAGAGGTGGG+TGG + chr3_3:45616221-45616240 Msa0454360:intron 35.0%
!!! TTCTTTTTTAAGAGGTGGGT+GGG + chr3_3:45616222-45616241 Msa0454360:intron 35.0%
TGGGTGGGATATTTATCTTT+CGG + chr3_3:45616237-45616256 Msa0454360:intron 35.0%
! ATACACAGGTTTACCTGTTT+TGG - chr3_3:45616425-45616444 None:intergenic 35.0%
ACAGGTAAACCTGTGTATAA+AGG + chr3_3:45616427-45616446 Msa0454360:intron 35.0%
CGAACCTTGAAAATAAGTTG+AGG - chr3_3:45616554-45616573 None:intergenic 35.0%
! AGATATGGATTTCTAGGAAG+AGG - chr3_3:45616840-45616859 None:intergenic 35.0%
!!! GGGAGGGTAATATTTTTTCT+CGG - chr3_3:45616955-45616974 None:intergenic 35.0%
TGTCAATTGATGAAGGTCTT+GGG - chr3_3:45617003-45617022 None:intergenic 35.0%
ATGTCAATTGATGAAGGTCT+TGG - chr3_3:45617004-45617023 None:intergenic 35.0%
AGAGATCTATGAAGACTCAA+TGG + chr3_3:45617102-45617121 Msa0454360:intron 35.0%
GAGATCTATGAAGACTCAAT+GGG + chr3_3:45617103-45617122 Msa0454360:intron 35.0%
TATTAAAAATTTGGGGGCCA+CGG + chr3_3:45617132-45617151 Msa0454360:intron 35.0%
! GAAAACAGTGTGCTGATATT+TGG + chr3_3:45617174-45617193 Msa0454360:intron 35.0%
! ACAATAACACTCCTTTTTGG+CGG - chr3_3:45617598-45617617 None:intergenic 35.0%
! TTTTATGTGCTTTTGACACG+AGG + chr3_3:45617861-45617880 Msa0454360:intron 35.0%
!! TTTCTATTTGCAGTGGATTG+AGG + chr3_3:45617885-45617904 Msa0454360:intron 35.0%
TATTTCACACTGTTACAGAC+TGG + chr3_3:45617947-45617966 Msa0454360:CDS 35.0%
AAGATCAAATGAGGTCGATT+AGG - chr3_3:45618009-45618028 None:intergenic 35.0%
CCATCTACAAAGATCAAATG+AGG - chr3_3:45618018-45618037 None:intergenic 35.0%
CCTCATTTGATCTTTGTAGA+TGG + chr3_3:45618015-45618034 Msa0454360:CDS 35.0%
CTTTGTAGATGGACATTGTA+AGG + chr3_3:45618026-45618045 Msa0454360:CDS 35.0%
!!! AAGGTTTTGAGATTCCGATT+AGG + chr3_3:45618261-45618280 Msa0454360:intron 35.0%
! TTTGAGATTCCGATTAGGAA+AGG + chr3_3:45618266-45618285 Msa0454360:intron 35.0%
AGGAAAGGATCATTGAAAGT+TGG + chr3_3:45618281-45618300 Msa0454360:intron 35.0%
ATCATTGAAAGTTGGAGAGT+TGG + chr3_3:45618289-45618308 Msa0454360:intron 35.0%
GTATGTATGCATGCAAAACA+TGG + chr3_3:45618516-45618535 Msa0454360:intron 35.0%
GTAGTAGTAGTAGATGTAGT+GGG - chr3_3:45618717-45618736 None:intergenic 35.0%
AGAGCTTCACGTAAGAAATA+GGG + chr3_3:45618899-45618918 Msa0454360:intron 35.0%
CTTTCTAATAATGATGCCAC+TGG + chr3_3:45619196-45619215 Msa0454360:intron 35.0%
ACACATCACATCTTCTTTCT+TGG + chr3_3:45619308-45619327 Msa0454360:intron 35.0%
ATCACATCTTCTTTCTTGGT+TGG + chr3_3:45619312-45619331 Msa0454360:intron 35.0%
ACAAATTTGCACTTGAACCT+TGG - chr3_3:45619341-45619360 None:intergenic 35.0%
! GGTTCAAGTGCAAATTTGTT+AGG + chr3_3:45619342-45619361 Msa0454360:intron 35.0%
!! GTGCAAATTTGTTAGGTACT+TGG + chr3_3:45619349-45619368 Msa0454360:intron 35.0%
ACAGAAGAATAACTCGTGTT+TGG - chr3_3:45619395-45619414 None:intergenic 35.0%
TCTAACTCAATATGCTCCAA+TGG - chr3_3:45619465-45619484 None:intergenic 35.0%
GAGCATATTGAGTTAGAACA+TGG + chr3_3:45619468-45619487 Msa0454360:intron 35.0%
AGAACATGGTTCTCATTATG+TGG + chr3_3:45619482-45619501 Msa0454360:intron 35.0%
CTTTCTTCTTCACTGCTAAA+TGG + chr3_3:45619508-45619527 Msa0454360:intron 35.0%
! TTTTGATGTCCATATTAGGG+AGG - chr3_3:45619572-45619591 None:intergenic 35.0%
CATCAAAAAAATGGGTCTGT+AGG + chr3_3:45619584-45619603 Msa0454360:intron 35.0%
!!! CCCCACCATTTTTAGTAAAA+TGG - chr3_3:45619674-45619693 None:intergenic 35.0%
CCTAATGTGGACATAAGAAA+AGG - chr3_3:45619712-45619731 None:intergenic 35.0%
! CCTTTTCTTATGTCCACATT+AGG + chr3_3:45619709-45619728 Msa0454360:intron 35.0%
!! CTTCTTAGTTTGATTTGCCT+TGG + chr3_3:45619902-45619921 Msa0454360:intron 35.0%
ATTATCAACGAATTCTGCCA+AGG - chr3_3:45619922-45619941 None:intergenic 35.0%
AAGTGGAGCCTGAAAAATAT+TGG - chr3_3:45619958-45619977 None:intergenic 35.0%
ATGACGAAAACATACTGTTC+CGG - chr3_3:45620033-45620052 None:intergenic 35.0%
TATGAGACTGCTCTCTTTAA+AGG + chr3_3:45620074-45620093 Msa0454360:CDS 35.0%
ATGAGACTGCTCTCTTTAAA+GGG + chr3_3:45620075-45620094 Msa0454360:CDS 35.0%
!!! ACGTGCAGTTTTTTCGTTAT+CGG - chr3_3:45620156-45620175 None:intergenic 35.0%
CTGAGTTTGGAGAAATGATT+AGG + chr3_3:45620180-45620199 Msa0454360:CDS 35.0%
! GAAATGATTAGGGCATCATT+TGG + chr3_3:45620191-45620210 Msa0454360:CDS 35.0%
CCAACATGGTGTAAGTTTAA+AGG - chr3_3:45620221-45620240 None:intergenic 35.0%
CCTTTAAACTTACACCATGT+TGG + chr3_3:45620218-45620237 Msa0454360:CDS 35.0%
AATTGGGCGTCTAATTACAA+AGG + chr3_3:45620368-45620387 Msa0454360:CDS 35.0%
ATTGGGCGTCTAATTACAAA+GGG + chr3_3:45620369-45620388 Msa0454360:CDS 35.0%
ATCATGCAATTAACCTTGAC+GGG + chr3_3:45620606-45620625 Msa0454360:CDS 35.0%
ATTGATCACAGTTTCAGGAT+TGG - chr3_3:45620639-45620658 None:intergenic 35.0%
TTCAAAACAGTCAACATCGA+AGG - chr3_3:45620685-45620704 None:intergenic 35.0%
! TGGAATTGCTGATAACTTGT+TGG + chr3_3:45620806-45620825 Msa0454360:three_prime_UTR 35.0%
AATTGCACAGTTCAGTGAAA+AGG + chr3_3:45620889-45620908 Msa0454360:three_prime_UTR 35.0%
ATTGCACAGTTCAGTGAAAA+GGG + chr3_3:45620890-45620909 Msa0454360:three_prime_UTR 35.0%
CCTCATCTGTATACAACATA+GGG - chr3_3:45621017-45621036 None:intergenic 35.0%
CCTATGTTGTATACAGATGA+GGG + chr3_3:45621015-45621034 Msa0454360:three_prime_UTR 35.0%
CTATGTTGTATACAGATGAG+GGG + chr3_3:45621016-45621035 Msa0454360:three_prime_UTR 35.0%
GAGAGAAGCTATGAACAAGA+AGG + chr3_3:45614272-45614291 Msa0454360:intron 40.0%
GAAGTAAAGACAGAGAGAGA+AGG - chr3_3:45614331-45614350 None:intergenic 40.0%
GTGTAGGGTTGAGAAAAGAA+GGG - chr3_3:45614362-45614381 None:intergenic 40.0%
!! TTGATGTGAGGATTTGGTGA+TGG - chr3_3:45614384-45614403 None:intergenic 40.0%
TCTATAAAGGGTCGTCGAAA+AGG - chr3_3:45614426-45614445 None:intergenic 40.0%
GGTGAATATGAGGGTAGAAT+TGG - chr3_3:45614480-45614499 None:intergenic 40.0%
TTCTACCCTCATATTCACCA+TGG + chr3_3:45614481-45614500 Msa0454360:CDS 40.0%
TGTGACCATGGTGAATATGA+GGG - chr3_3:45614489-45614508 None:intergenic 40.0%
TTGTGACCATGGTGAATATG+AGG - chr3_3:45614490-45614509 None:intergenic 40.0%
AACTACACTAAGGTCATGTG+AGG + chr3_3:45614521-45614540 Msa0454360:CDS 40.0%
ACTACACTAAGGTCATGTGA+GGG + chr3_3:45614522-45614541 Msa0454360:CDS 40.0%
! AGGTCATGTGAGGGTTATTT+TGG + chr3_3:45614531-45614550 Msa0454360:CDS 40.0%
GTTGGTATAGTGAGACATTG+AGG + chr3_3:45614625-45614644 Msa0454360:CDS 40.0%
TTGAGGAGTTCAGTTTGTGA+AGG + chr3_3:45614642-45614661 Msa0454360:CDS 40.0%
GGAGAGGATAAAAATGGCAA+AGG + chr3_3:45614686-45614705 Msa0454360:CDS 40.0%
AGGATAAAAATGGCAAAGGG+TGG + chr3_3:45614690-45614709 Msa0454360:CDS 40.0%
GAGAGTTTGGGTGATGTTAT+TGG + chr3_3:45614714-45614733 Msa0454360:CDS 40.0%
! GAGTTGCCTTTGTTTGATGA+TGG + chr3_3:45614753-45614772 Msa0454360:CDS 40.0%
!!! GTTTGATGATGGTGCTTTTG+AGG + chr3_3:45614764-45614783 Msa0454360:CDS 40.0%
!! TTGATGAGGGGTTTTTGGAT+AGG + chr3_3:45614826-45614845 Msa0454360:CDS 40.0%
TTGGATAGGTATGTTCCTAG+AGG + chr3_3:45614840-45614859 Msa0454360:CDS 40.0%
TGGATAGGTATGTTCCTAGA+GGG + chr3_3:45614841-45614860 Msa0454360:CDS 40.0%
ATTGGTAAGATGAGGGTTGT+TGG + chr3_3:45614894-45614913 Msa0454360:CDS 40.0%
! AATTTGCTTCTGATCAGGTG+AGG + chr3_3:45615660-45615679 Msa0454360:intron 40.0%
TTCGAATCAGTGCTTGGATT+TGG + chr3_3:45616103-45616122 Msa0454360:intron 40.0%
! TTCGGTTCGACCTTATATTG+CGG + chr3_3:45616255-45616274 Msa0454360:intron 40.0%
ATATCCCATGCCGCAATATA+AGG - chr3_3:45616268-45616287 None:intergenic 40.0%
! ATTGCGGCATGGGATATTTT+TGG + chr3_3:45616271-45616290 Msa0454360:intron 40.0%
TATGGCCTCTAACCAGATAT+TGG - chr3_3:45616493-45616512 None:intergenic 40.0%
! GAGGAACTAATCTTGGTGTA+AGG - chr3_3:45616821-45616840 None:intergenic 40.0%
CTAGGAAGAGGAACTAATCT+TGG - chr3_3:45616828-45616847 None:intergenic 40.0%
AAAATGGCATCTCAATCCCT+AGG + chr3_3:45616874-45616893 Msa0454360:intron 40.0%
AGGAGAGCAGTAATCAATGA+GGG - chr3_3:45616976-45616995 None:intergenic 40.0%
ATTAAAAATTTGGGGGCCAC+GGG + chr3_3:45617133-45617152 Msa0454360:intron 40.0%
ATTTCTCCGAAACCCAGAAA+AGG + chr3_3:45617297-45617316 Msa0454360:intron 40.0%
TTTCTCCGAAACCCAGAAAA+GGG + chr3_3:45617298-45617317 Msa0454360:intron 40.0%
! ATTCTCCCTTTTCTGGGTTT+CGG - chr3_3:45617306-45617325 None:intergenic 40.0%
AAGCACAATAACAGCCACAT+AGG + chr3_3:45617414-45617433 Msa0454360:intron 40.0%
! ACGAGGTTTTCTATTTGCAG+TGG + chr3_3:45617878-45617897 Msa0454360:intron 40.0%
GATTGAGGAACCAACACTTA+TGG + chr3_3:45617900-45617919 Msa0454360:CDS 40.0%
TGAAAGTTGGAGAGTTGGAA+AGG + chr3_3:45618294-45618313 Msa0454360:intron 40.0%
ATGCTACCTAAGATCTGAGA+GGG + chr3_3:45618396-45618415 Msa0454360:intron 40.0%
GGTAGTAGTAGTAGATGTAG+TGG - chr3_3:45618718-45618737 None:intergenic 40.0%
ACTACTACTACCATCAGCTT+TGG + chr3_3:45618726-45618745 Msa0454360:intron 40.0%
TTGTTCTCTGATCTTGTACG+CGG - chr3_3:45618772-45618791 None:intergenic 40.0%
TCAGAGAACAAGAAAGAGAC+AGG + chr3_3:45618781-45618800 Msa0454360:intron 40.0%
CAGAGAACAAGAAAGAGACA+GGG + chr3_3:45618782-45618801 Msa0454360:intron 40.0%
GAGAAGTGAGAATGAGAGAT+TGG + chr3_3:45618824-45618843 Msa0454360:intron 40.0%
TGAGAGATTGGAGAACATAG+TGG + chr3_3:45618836-45618855 Msa0454360:intron 40.0%
GAGAGCTTCACGTAAGAAAT+AGG + chr3_3:45618898-45618917 Msa0454360:intron 40.0%
!! TCTTTCTTGGTTGGTTTCCA+AGG + chr3_3:45619321-45619340 Msa0454360:intron 40.0%
CAAAAAAATGGGTCTGTAGG+TGG + chr3_3:45619587-45619606 Msa0454360:intron 40.0%
ACATAAGAAAAGGGGTCCAA+AGG - chr3_3:45619702-45619721 None:intergenic 40.0%
!! TAGGGGTACCCTAAGAAATA+AGG + chr3_3:45619728-45619747 Msa0454360:intron 40.0%
!! AGGGGTACCCTAAGAAATAA+GGG + chr3_3:45619729-45619748 Msa0454360:intron 40.0%
TCATGCTATTCTCTCACCTT+TGG + chr3_3:45620049-45620068 Msa0454360:CDS 40.0%
CATGCTATTCTCTCACCTTT+GGG + chr3_3:45620050-45620069 Msa0454360:CDS 40.0%
! TGCTCTCTTTAAAGGGCTAA+CGG + chr3_3:45620082-45620101 Msa0454360:CDS 40.0%
!!! CGTGCAGTTTTTTCGTTATC+GGG - chr3_3:45620155-45620174 None:intergenic 40.0%
! ACTGCACGTATTTCTGAGTT+TGG + chr3_3:45620167-45620186 Msa0454360:CDS 40.0%
!! CAGAGACTTGTTTTCCAACA+TGG - chr3_3:45620235-45620254 None:intergenic 40.0%
CATGTTGGAAAACAAGTCTC+TGG + chr3_3:45620233-45620252 Msa0454360:CDS 40.0%
AATCTTCACGACGAACAAAC+AGG - chr3_3:45620271-45620290 None:intergenic 40.0%
! TATTTAGCTCATCCACGTCA+CGG + chr3_3:45620290-45620309 Msa0454360:CDS 40.0%
TGAATCGAGACTAAGTAACG+AGG + chr3_3:45620322-45620341 Msa0454360:CDS 40.0%
ATTAGACGCCCAATTGTTCA+AGG - chr3_3:45620363-45620382 None:intergenic 40.0%
ACACATGTCTATGAAGGAAC+AGG + chr3_3:45620424-45620443 Msa0454360:CDS 40.0%
TGTCTATGAAGGAACAGGTA+CGG + chr3_3:45620429-45620448 Msa0454360:CDS 40.0%
CAAGATGCATCTGTGATCAT+TGG + chr3_3:45620458-45620477 Msa0454360:CDS 40.0%
AGATTATTAGCAGCCAGTTC+AGG + chr3_3:45620540-45620559 Msa0454360:CDS 40.0%
! ATTTTGCGTACATTGCACGA+TGG + chr3_3:45620570-45620589 Msa0454360:CDS 40.0%
GCTCAGTAACCAAACCAATT+TGG - chr3_3:45620783-45620802 None:intergenic 40.0%
!! TGGTTTGGTTACTGAGCTAA+TGG + chr3_3:45620786-45620805 Msa0454360:three_prime_UTR 40.0%
TTGCACAGTTCAGTGAAAAG+GGG + chr3_3:45620891-45620910 Msa0454360:three_prime_UTR 40.0%
TAGGGTCAAGGATCAAATGA+AGG - chr3_3:45620999-45621018 None:intergenic 40.0%
CTGTATACAACATAGGGTCA+AGG - chr3_3:45621011-45621030 None:intergenic 40.0%
CCCTATGTTGTATACAGATG+AGG + chr3_3:45621014-45621033 Msa0454360:three_prime_UTR 40.0%
CCCTCATCTGTATACAACAT+AGG - chr3_3:45621018-45621037 None:intergenic 40.0%
TAGGGTTGAGAAAAGAAGGG+TGG - chr3_3:45614359-45614378 None:intergenic 45.0%
GGTGTAGGGTTGAGAAAAGA+AGG - chr3_3:45614363-45614382 None:intergenic 45.0%
!! GAGGATTTGGTGATGGTGTA+GGG - chr3_3:45614377-45614396 None:intergenic 45.0%
!! TGAGGATTTGGTGATGGTGT+AGG - chr3_3:45614378-45614397 None:intergenic 45.0%
TATGAGGGTAGAATTGGCCA+TGG - chr3_3:45614474-45614493 None:intergenic 45.0%
!! GCGCTTGGTTGATGTGTTTT+CGG + chr3_3:45614566-45614585 Msa0454360:CDS 45.0%
!! CGCTTGGTTGATGTGTTTTC+GGG + chr3_3:45614567-45614586 Msa0454360:CDS 45.0%
AGGAGTTCAGTTTGTGAAGG+TGG + chr3_3:45614645-45614664 Msa0454360:CDS 45.0%
GGAGTTCAGTTTGTGAAGGT+GGG + chr3_3:45614646-45614665 Msa0454360:CDS 45.0%
TTCAGTTTGTGAAGGTGGGA+GGG + chr3_3:45614650-45614669 Msa0454360:CDS 45.0%
!! GGTGGTGGAGAGGATAAAAA+TGG + chr3_3:45614680-45614699 Msa0454360:CDS 45.0%
!!! GATGGTGCTTTTGAGGTTGA+TGG + chr3_3:45614771-45614790 Msa0454360:CDS 45.0%
!! TTTGAGGTTGATGGTGGTGT+AGG + chr3_3:45614780-45614799 Msa0454360:CDS 45.0%
!! TTGAGGTTGATGGTGGTGTA+GGG + chr3_3:45614781-45614800 Msa0454360:CDS 45.0%
! TGGTGGTGTAGGGTTTGAAA+AGG + chr3_3:45614791-45614810 Msa0454360:CDS 45.0%
GGTGGTGTAGGGTTTGAAAA+GGG + chr3_3:45614792-45614811 Msa0454360:CDS 45.0%
GTGGTGTAGGGTTTGAAAAG+GGG + chr3_3:45614793-45614812 Msa0454360:CDS 45.0%
AGGGTTTGAAAAGGGGAAGA+TGG + chr3_3:45614800-45614819 Msa0454360:CDS 45.0%
! GGGAAGATGGTTGTTGATGA+GGG + chr3_3:45614813-45614832 Msa0454360:CDS 45.0%
! GGAAGATGGTTGTTGATGAG+GGG + chr3_3:45614814-45614833 Msa0454360:CDS 45.0%
!! GGTTGTTGATGAGGGGTTTT+TGG + chr3_3:45614821-45614840 Msa0454360:CDS 45.0%
GGATAGGTATGTTCCTAGAG+GGG + chr3_3:45614842-45614861 Msa0454360:CDS 45.0%
TGTCTCATAATCTCCCCTCT+AGG - chr3_3:45614858-45614877 None:intergenic 45.0%
GTAAGATGAGGGTTGTTGGA+AGG + chr3_3:45614898-45614917 Msa0454360:CDS 45.0%
AGTTGGGTGTTTATGGCTGT+TGG + chr3_3:45615359-45615378 Msa0454360:intron 45.0%
! GGTGTTTATGGCTGTTGGTT+AGG + chr3_3:45615364-45615383 Msa0454360:intron 45.0%
! TGGTTAGTTGTTGGGGCAAA+TGG + chr3_3:45615537-45615556 Msa0454360:intron 45.0%
GGGCAAATGGAATTGTTGTC+AGG + chr3_3:45615550-45615569 Msa0454360:intron 45.0%
CTTCTGATCAGGTGAGGTTT+AGG + chr3_3:45615666-45615685 Msa0454360:intron 45.0%
TGAGTTTGATCAGTTGGGTG+TGG + chr3_3:45615733-45615752 Msa0454360:intron 45.0%
TTGATCAGTTGGGTGTGGTT+TGG + chr3_3:45615738-45615757 Msa0454360:intron 45.0%
TTCGACCTTATATTGCGGCA+TGG + chr3_3:45616260-45616279 Msa0454360:intron 45.0%
TCGACCTTATATTGCGGCAT+GGG + chr3_3:45616261-45616280 Msa0454360:intron 45.0%
AGAGATTGGAGGGAATGTGA+AGG + chr3_3:45616382-45616401 Msa0454360:intron 45.0%
GAGATTGGAGGGAATGTGAA+GGG + chr3_3:45616383-45616402 Msa0454360:intron 45.0%
AGATTGGAGGGAATGTGAAG+GGG + chr3_3:45616384-45616403 Msa0454360:intron 45.0%
GTTGGCCAATATCTGGTTAG+AGG + chr3_3:45616485-45616504 Msa0454360:intron 45.0%
GACGTCATCATTGATGAGAG+AGG + chr3_3:45616651-45616670 Msa0454360:intron 45.0%
!!! CGGTTTTCTGGGTTTTGAAG+AGG - chr3_3:45616935-45616954 None:intergenic 45.0%
AGCAGTAATCAATGAGGGGA+GGG - chr3_3:45616971-45616990 None:intergenic 45.0%
GGAGAGCAGTAATCAATGAG+GGG - chr3_3:45616975-45616994 None:intergenic 45.0%
GAGGAGAGCAGTAATCAATG+AGG - chr3_3:45616977-45616996 None:intergenic 45.0%
TGATGAAGGTCTTGGGTTTG+AGG - chr3_3:45616996-45617015 None:intergenic 45.0%
CAGGGGATGTCAATTGATGA+AGG - chr3_3:45617010-45617029 None:intergenic 45.0%
CTTCATCAATTGACATCCCC+TGG + chr3_3:45617008-45617027 Msa0454360:intron 45.0%
GAGAGGAATGAGTTTGCAGA+GGG + chr3_3:45617072-45617091 Msa0454360:intron 45.0%
CTAACAAAACCTTCTTCCCG+TGG - chr3_3:45617152-45617171 None:intergenic 45.0%
!!! CGGGAAGAAGGTTTTGTTAG+TGG + chr3_3:45617152-45617171 Msa0454360:intron 45.0%
! AGTGTGCTGATATTTGGCTG+AGG + chr3_3:45617180-45617199 Msa0454360:intron 45.0%
!! CTCCTTTTTGGCGGAATACA+CGG - chr3_3:45617589-45617608 None:intergenic 45.0%
AAGCGTGTCACCATAAGTGT+TGG - chr3_3:45617913-45617932 None:intergenic 45.0%
GATGCTACCTAAGATCTGAG+AGG + chr3_3:45618395-45618414 Msa0454360:intron 45.0%
TGCTACCTAAGATCTGAGAG+GGG + chr3_3:45618397-45618416 Msa0454360:intron 45.0%
! TAGTAGATGTAGTGGGACAG+GGG - chr3_3:45618710-45618729 None:intergenic 45.0%
! GTAGTAGATGTAGTGGGACA+GGG - chr3_3:45618711-45618730 None:intergenic 45.0%
! AGTAGTAGATGTAGTGGGAC+AGG - chr3_3:45618712-45618731 None:intergenic 45.0%
TTCTGCTGATGCGAGTATTC+AGG - chr3_3:45618983-45619002 None:intergenic 45.0%
!!! ATGCTACATTTTGGCTAGGG+AGG + chr3_3:45619056-45619075 Msa0454360:intron 45.0%
! TTGCCATTTGTAGGAGACTG+AGG + chr3_3:45619099-45619118 Msa0454360:intron 45.0%
TGATGGCAGAATTTGACCAG+TGG - chr3_3:45619215-45619234 None:intergenic 45.0%
! CATTTAGGGCCTCCCTAATA+TGG + chr3_3:45619560-45619579 Msa0454360:intron 45.0%
TAAGAAAAGGGGTCCAAAGG+TGG - chr3_3:45619699-45619718 None:intergenic 45.0%
! TTCTTAGGGTACCCCTAATG+TGG - chr3_3:45619725-45619744 None:intergenic 45.0%
GCTTTCCATGTCTCTTCAAG+TGG - chr3_3:45619975-45619994 None:intergenic 45.0%
AGAGCAGTCTCATATCCCAA+AGG - chr3_3:45620068-45620087 None:intergenic 45.0%
GAGCTTCTGCACAAGAATTG+TGG + chr3_3:45620123-45620142 Msa0454360:CDS 45.0%
GTTGGAAAACAAGTCTCTGG+AGG + chr3_3:45620236-45620255 Msa0454360:CDS 45.0%
GTTCGCACACATGTCTATGA+AGG + chr3_3:45620418-45620437 Msa0454360:CDS 45.0%
GTCTATGAAGGAACAGGTAC+GGG + chr3_3:45620430-45620449 Msa0454360:CDS 45.0%
TCTGTGATCATTGGTGCACA+TGG + chr3_3:45620467-45620486 Msa0454360:CDS 45.0%
CGTGCAATGTACGCAAAATG+TGG - chr3_3:45620569-45620588 None:intergenic 45.0%
CGTACATTGCACGATGGAAA+GGG + chr3_3:45620576-45620595 Msa0454360:CDS 45.0%
! AGCGCATTGATCACAGTTTC+AGG - chr3_3:45620644-45620663 None:intergenic 45.0%
TGAAACTGTGATCAATGCGC+TGG + chr3_3:45620643-45620662 Msa0454360:CDS 45.0%
!!! GTTTTTATTTTATTTTATTT+TGG + chr3_3:45615630-45615649 Msa0454360:intron 5.0%
!!! TTTTTTAATAAAAAGATAAA+GGG - chr3_3:45616725-45616744 None:intergenic 5.0%
!!! TTTTTTTAATAAAAAGATAA+AGG - chr3_3:45616726-45616745 None:intergenic 5.0%
!! AAAAAATAAAAATAAATGAA+TGG + chr3_3:45618539-45618558 Msa0454360:intron 5.0%
! TGGAAATGGATTCACGCGCT+TGG + chr3_3:45614551-45614570 Msa0454360:CDS 50.0%
GTTCAGTTTGTGAAGGTGGG+AGG + chr3_3:45614649-45614668 Msa0454360:CDS 50.0%
GCAAAGGGTGGTGAGAGTTT+GGG + chr3_3:45614702-45614721 Msa0454360:CDS 50.0%
!!! GGTGCTTTTGAGGTTGATGG+TGG + chr3_3:45614774-45614793 Msa0454360:CDS 50.0%
GGGGAAGATGGTTGTTGATG+AGG + chr3_3:45614812-45614831 Msa0454360:CDS 50.0%
!! CAGTTGGGTGTGGTTTGGTT+TGG + chr3_3:45615743-45615762 Msa0454360:intron 50.0%
AAAACTCTTTCGACCGACCG+TGG - chr3_3:45615783-45615802 None:intergenic 50.0%
TAAGAAAGCAGCAGCCAGCT+AGG + chr3_3:45616462-45616481 Msa0454360:intron 50.0%
AAGAAAGCAGCAGCCAGCTA+GGG + chr3_3:45616463-45616482 Msa0454360:intron 50.0%
AGATATTGGCCAACCCTAGC+TGG - chr3_3:45616479-45616498 None:intergenic 50.0%
!! AGCTAGGGTTGGCCAATATC+TGG + chr3_3:45616478-45616497 Msa0454360:intron 50.0%
GACGTCGCATGAGCAACAAA+CGG - chr3_3:45616637-45616656 None:intergenic 50.0%
GAGCAGTAATCAATGAGGGG+AGG - chr3_3:45616972-45616991 None:intergenic 50.0%
!! AGAGTGATGGTTTGCTCCAG+GGG - chr3_3:45617027-45617046 None:intergenic 50.0%
!! GAGAGTGATGGTTTGCTCCA+GGG - chr3_3:45617028-45617047 None:intergenic 50.0%
!! TGAGAGTGATGGTTTGCTCC+AGG - chr3_3:45617029-45617048 None:intergenic 50.0%
AAATGCCAGTGAAGAGCGAG+AGG + chr3_3:45617055-45617074 Msa0454360:intron 50.0%
TCATTCCTCTCGCTCTTCAC+TGG - chr3_3:45617063-45617082 None:intergenic 50.0%
CGAGAGGAATGAGTTTGCAG+AGG + chr3_3:45617071-45617090 Msa0454360:intron 50.0%
CTCCGTGTATTCCGCCAAAA+AGG + chr3_3:45617584-45617603 Msa0454360:intron 50.0%
GCTACCTAAGATCTGAGAGG+GGG + chr3_3:45618398-45618417 Msa0454360:intron 50.0%
CAAGAAAGAGACAGGGTTGC+AGG + chr3_3:45618789-45618808 Msa0454360:intron 50.0%
GAGAGAGAGAGAGAGAGACA+TGG + chr3_3:45618873-45618892 Msa0454360:intron 50.0%
AGGCCTCAGTCTCCTACAAA+TGG - chr3_3:45619105-45619124 None:intergenic 50.0%
! TGTAGGAGACTGAGGCCTTT+TGG + chr3_3:45619107-45619126 Msa0454360:intron 50.0%
!!! AGACTGAGGCCTTTTGGCTT+GGG + chr3_3:45619113-45619132 Msa0454360:intron 50.0%
TCTTCACCTCCCAAGCCAAA+AGG - chr3_3:45619125-45619144 None:intergenic 50.0%
AGGCTCCACTTGAAGAGACA+TGG + chr3_3:45619967-45619986 Msa0454360:intron 50.0%
! TCAACTTTTCCACCGTGACG+TGG - chr3_3:45620305-45620324 None:intergenic 50.0%
GTGCGAACAATCCGTTGACA+AGG - chr3_3:45620406-45620425 None:intergenic 50.0%
ATCATTGGTGCACATGGTGC+TGG + chr3_3:45620473-45620492 Msa0454360:CDS 50.0%
CAAAATGTGGACGCCTGAAC+TGG - chr3_3:45620556-45620575 None:intergenic 50.0%
GCGTACATTGCACGATGGAA+AGG + chr3_3:45620575-45620594 Msa0454360:CDS 50.0%
CATTGCACGATGGAAAGGGT+TGG + chr3_3:45620580-45620599 Msa0454360:CDS 50.0%
! CCAGGTACTGTCAACAACTC+AGG - chr3_3:45620957-45620976 None:intergenic 50.0%
CCTGAGTTGTTGACAGTACC+TGG + chr3_3:45620954-45620973 Msa0454360:three_prime_UTR 50.0%
ACAGTACCTGGTGCAGTATG+TGG + chr3_3:45620966-45620985 Msa0454360:three_prime_UTR 50.0%
AACATGCCACATACTGCACC+AGG - chr3_3:45620975-45620994 None:intergenic 50.0%
ACCTAAACCACCCTCCTCCT+CGG - chr3_3:45614605-45614624 None:intergenic 55.0%
GAGGAGGGTGGTTTAGGTGT+TGG + chr3_3:45614607-45614626 Msa0454360:CDS 55.0%
TTTGTGAAGGTGGGAGGGTG+AGG + chr3_3:45614655-45614674 Msa0454360:CDS 55.0%
GGCAAAGGGTGGTGAGAGTT+TGG + chr3_3:45614701-45614720 Msa0454360:CDS 55.0%
TGGCTGAGGATTGCAAGTGC+TGG + chr3_3:45617194-45617213 Msa0454360:intron 55.0%
GGCGGAATACACGGAGTGAT+TGG - chr3_3:45617580-45617599 None:intergenic 55.0%
GCTACCCCCTCTCAGATCTT+AGG - chr3_3:45618405-45618424 None:intergenic 55.0%
TCTGATCTTGTACGCGGCCA+TGG - chr3_3:45618766-45618785 None:intergenic 55.0%
!! GAGACTGAGGCCTTTTGGCT+TGG + chr3_3:45619112-45619131 Msa0454360:intron 55.0%
! AAATGGTGGGGGTCCACCTT+TGG + chr3_3:45619683-45619702 Msa0454360:intron 55.0%
TTAGCTCATCCACGTCACGG+TGG + chr3_3:45620293-45620312 Msa0454360:CDS 55.0%
GATTGGCATACGACCCGTCA+AGG - chr3_3:45620622-45620641 None:intergenic 55.0%
TGAAGGTGGGAGGGTGAGGA+TGG + chr3_3:45614659-45614678 Msa0454360:CDS 60.0%
AAGCAGCAGCCAGCTAGGGT+TGG + chr3_3:45616467-45616486 Msa0454360:intron 60.0%
ATTTGGGGGCCACGGGAAGA+AGG + chr3_3:45617140-45617159 Msa0454360:intron 60.0%
! TGTAGTGGGACAGGGGCTAG+TGG - chr3_3:45618703-45618722 None:intergenic 60.0%
!! TGGTGGTGGGCCAAAGCTGA+TGG - chr3_3:45618739-45618758 None:intergenic 60.0%
TTGTACGCGGCCATGGCTTC+TGG - chr3_3:45618759-45618778 None:intergenic 60.0%
!!! CTGAGGCCTTTTGGCTTGGG+AGG + chr3_3:45619116-45619135 Msa0454360:intron 60.0%
GCCGAGGAGGAGGGTGGTTT+AGG + chr3_3:45614601-45614620 Msa0454360:CDS 65.0%
AGGTGGGAGGGTGAGGATGG+TGG + chr3_3:45614662-45614681 Msa0454360:CDS 65.0%
! TGGGAGGGTGAGGATGGTGG+TGG + chr3_3:45614665-45614684 Msa0454360:CDS 65.0%
!! GGGTGAGGATGGTGGTGGAG+AGG + chr3_3:45614670-45614689 Msa0454360:CDS 65.0%
TGGCCCACCACCAGAAGCCA+TGG + chr3_3:45618746-45618765 Msa0454360:intron 65.0%
CGGCCATGGCTTCTGGTGGT+GGG - chr3_3:45618752-45618771 None:intergenic 65.0%
TACGCGGCCATGGCTTCTGG+TGG - chr3_3:45618756-45618775 None:intergenic 65.0%
!! GTGTTTTCGGGCCGCGCCGA+AGG + chr3_3:45614579-45614598 Msa0454360:CDS 70.0%
CCACCCTCCTCCTCGGCCTT+CGG - chr3_3:45614598-45614617 None:intergenic 70.0%
GCGGCCATGGCTTCTGGTGG+TGG - chr3_3:45618753-45618772 None:intergenic 70.0%
CTCCTCCTCGGCCTTCGGCG+CGG - chr3_3:45614593-45614612 None:intergenic 75.0%
GCGCCGAAGGCCGAGGAGGA+GGG + chr3_3:45614592-45614611 Msa0454360:CDS 75.0%
CCGAAGGCCGAGGAGGAGGG+TGG + chr3_3:45614595-45614614 Msa0454360:CDS 75.0%
! CGCGCCGAAGGCCGAGGAGG+AGG + chr3_3:45614591-45614610 Msa0454360:CDS 80.0%
! TCGGGCCGCGCCGAAGGCCG+AGG + chr3_3:45614585-45614604 Msa0454360:CDS 85.0%
! GGCCGCGCCGAAGGCCGAGG+AGG + chr3_3:45614588-45614607 Msa0454360:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 45614156 45621182 45614156 ID=Msa0454360;Name=Msa0454360
chr3_3 mRNA 45614156 45621182 45614156 ID=Msa0454360-mRNA-1;Parent=Msa0454360;Name=Msa0454360-mRNA-1;_AED=0.00;_eAED=0.00;_QI=105|1|1|1|0.66|0.5|4|488|511
chr3_3 exon 45614156 45614251 45614156 ID=Msa0454360-mRNA-1:exon:8458;Parent=Msa0454360-mRNA-1
chr3_3 exon 45614273 45614941 45614273 ID=Msa0454360-mRNA-1:exon:8459;Parent=Msa0454360-mRNA-1
chr3_3 exon 45617898 45618047 45617898 ID=Msa0454360-mRNA-1:exon:8460;Parent=Msa0454360-mRNA-1
chr3_3 exon 45619969 45621182 45619969 ID=Msa0454360-mRNA-1:exon:8461;Parent=Msa0454360-mRNA-1
chr3_3 five_prime_UTR 45614156 45614251 45614156 ID=Msa0454360-mRNA-1:five_prime_utr;Parent=Msa0454360-mRNA-1
chr3_3 five_prime_UTR 45614273 45614281 45614273 ID=Msa0454360-mRNA-1:five_prime_utr;Parent=Msa0454360-mRNA-1
chr3_3 CDS 45614282 45614941 45614282 ID=Msa0454360-mRNA-1:cds;Parent=Msa0454360-mRNA-1
chr3_3 CDS 45617898 45618047 45617898 ID=Msa0454360-mRNA-1:cds;Parent=Msa0454360-mRNA-1
chr3_3 CDS 45619969 45620694 45619969 ID=Msa0454360-mRNA-1:cds;Parent=Msa0454360-mRNA-1
chr3_3 three_prime_UTR 45620695 45621182 45620695 ID=Msa0454360-mRNA-1:three_prime_utr;Parent=Msa0454360-mRNA-1
Gene Sequence

>Msa0454360

ATGAACAAGAAGGTTCAGATCCTACTATTCCTTTTCATCTTCAACTCCTTCTCTCTCTGTCTTTACTTCATACACCACCCTTCTTTTCTCAACCCTACACCATCACCAAATCCTCACATCAAAATTTTCACTAAAGATTCACCTTTTCGACGACCCTTTATAGAGAAACACAAAACCCATATCTTAAAACCATGGCCAATTCTACCCTCATATTCACCATGGTCACAAAATTCAAATTCAACTACACTAAGGTCATGTGAGGGTTATTTTGGAAATGGATTCACGCGCTTGGTTGATGTGTTTTCGGGCCGCGCCGAAGGCCGAGGAGGAGGGTGGTTTAGGTGTTGGTATAGTGAGACATTGAGGAGTTCAGTTTGTGAAGGTGGGAGGGTGAGGATGGTGGTGGAGAGGATAAAAATGGCAAAGGGTGGTGAGAGTTTGGGTGATGTTATTGGAAGAAGTGAAGATGAGGAGTTGCCTTTGTTTGATGATGGTGCTTTTGAGGTTGATGGTGGTGTAGGGTTTGAAAAGGGGAAGATGGTTGTTGATGAGGGGTTTTTGGATAGGTATGTTCCTAGAGGGGAGATTATGAGACATACTATGCGTGATTTGATTGGTAAGATGAGGGTTGTTGGAAGGAAAGAATTTCATTGTGATAAGTGGATTGAGGAACCAACACTTATGGTGACACGCTTTGAATATGCTAATCTATTTCACACTGTTACAGACTGGTACAGTGCATATGTTTCTTCTAGAGTTACTGGCTTGCCTAATCGACCTCATTTGATCTTTGTAGATGGACATTGTAAGGCTCCACTTGAAGAGACATGGAAAGCGCTATTCTCAAGCGTCAGATATGCTAAAAACTTCACCGGAACAGTATGTTTTCGTCATGCTATTCTCTCACCTTTGGGATATGAGACTGCTCTCTTTAAAGGGCTAACGGAAGATATATTTTGCAACGGAGCTTCTGCACAAGAATTGTGGCGAAAACCCGATAACGAAAAAACTGCACGTATTTCTGAGTTTGGAGAAATGATTAGGGCATCATTTGGACTACCTTTAAACTTACACCATGTTGGAAAACAAGTCTCTGGAGGACATAATGTCCTGTTTGTTCGTCGTGAAGATTATTTAGCTCATCCACGTCACGGTGGAAAAGTTGAATCGAGACTAAGTAACGAGGCAGAAGTGTTTGAATCCTTGAACAATTGGGCGTCTAATTACAAAGGGTGTAAAATCAACCTTGTCAACGGATTGTTCGCACACATGTCTATGAAGGAACAGGTACGGGCAATTCAAGATGCATCTGTGATCATTGGTGCACATGGTGCTGGTCTTACTCACATAGTATCTGCATTGCCTAAAACTGTGATTCTAGAGATTATTAGCAGCCAGTTCAGGCGTCCACATTTTGCGTACATTGCACGATGGAAAGGGTTGGAGTATCATGCAATTAACCTTGACGGGTCGTATGCCAATCCTGAAACTGTGATCAATGCGCTGGTCAGCATAATGAAAAGCCTTCGATGTTGA

Protein sequence

>Msa0454360

MNKKVQILLFLFIFNSFSLCLYFIHHPSFLNPTPSPNPHIKIFTKDSPFRRPFIEKHKTHILKPWPILPSYSPWSQNSNSTTLRSCEGYFGNGFTRLVDVFSGRAEGRGGGWFRCWYSETLRSSVCEGGRVRMVVERIKMAKGGESLGDVIGRSEDEELPLFDDGAFEVDGGVGFEKGKMVVDEGFLDRYVPRGEIMRHTMRDLIGKMRVVGRKEFHCDKWIEEPTLMVTRFEYANLFHTVTDWYSAYVSSRVTGLPNRPHLIFVDGHCKAPLEETWKALFSSVRYAKNFTGTVCFRHAILSPLGYETALFKGLTEDIFCNGASAQELWRKPDNEKTARISEFGEMIRASFGLPLNLHHVGKQVSGGHNVLFVRREDYLAHPRHGGKVESRLSNEAEVFESLNNWASNYKGCKINLVNGLFAHMSMKEQVRAIQDASVIIGAHGAGLTHIVSALPKTVILEIISSQFRRPHFAYIARWKGLEYHAINLDGSYANPETVINALVSIMKSLRC*