Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919860 | XP_003619683.3 | 93.195 | 338 | 4 | 1 | 1 | 338 | 1 | 319 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919860 | sp|Q9LVB0|AHL6_ARATH | 51.681 | 238 | 83 | 8 | 50 | 276 | 75 | 291 | 7.98e-58 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010110 | Msa0919860 | 0.801794 | 7.611728e-49 | -8.615850e-47 |
| Msa0032590 | Msa0919860 | 0.838594 | 2.621673e-57 | -8.615850e-47 |
| Msa0033110 | Msa0919860 | 0.801994 | 6.922433e-49 | -8.615850e-47 |
| Msa0044260 | Msa0919860 | 0.801480 | 8.826402e-49 | -8.615850e-47 |
| Msa0079070 | Msa0919860 | 0.815945 | 7.125336e-52 | -8.615850e-47 |
| Msa0081390 | Msa0919860 | 0.800964 | 1.125829e-48 | -8.615850e-47 |
| Msa0081780 | Msa0919860 | 0.830974 | 2.170491e-55 | -8.615850e-47 |
| Msa0083280 | Msa0919860 | 0.809231 | 2.096038e-50 | -8.615850e-47 |
| Msa0084380 | Msa0919860 | 0.807254 | 5.530045e-50 | -8.615850e-47 |
| Msa0089750 | Msa0919860 | 0.834437 | 2.998469e-56 | -8.615850e-47 |
| Msa0092240 | Msa0919860 | 0.808787 | 2.608363e-50 | -8.615850e-47 |
| Msa0104240 | Msa0919860 | 0.804595 | 2.003111e-49 | -8.615850e-47 |
| Msa0106710 | Msa0919860 | 0.803947 | 2.733885e-49 | -8.615850e-47 |
| Msa0115790 | Msa0919860 | 0.821266 | 4.423189e-53 | -8.615850e-47 |
| Msa0611210 | Msa0919860 | 0.823105 | 1.656637e-53 | -8.615850e-47 |
| Msa0611830 | Msa0919860 | 0.811363 | 7.268924e-51 | -8.615850e-47 |
| Msa0645990 | Msa0919860 | 0.806575 | 7.696703e-50 | -8.615850e-47 |
| Msa0651550 | Msa0919860 | 0.806670 | 7.348804e-50 | -8.615850e-47 |
| Msa0658000 | Msa0919860 | 0.802692 | 4.972567e-49 | -8.615850e-47 |
| Msa0658040 | Msa0919860 | 0.816673 | 4.899612e-52 | -8.615850e-47 |
| Msa0690860 | Msa0919860 | 0.809628 | 1.722668e-50 | -8.615850e-47 |
| Msa0707250 | Msa0919860 | 0.835030 | 2.126456e-56 | -8.615850e-47 |
| Msa0709400 | Msa0919860 | 0.810171 | 1.316148e-50 | -8.615850e-47 |
| Msa0741440 | Msa0919860 | 0.820926 | 5.298150e-53 | -8.615850e-47 |
| Msa0803960 | Msa0919860 | 0.827789 | 1.288821e-54 | -8.615850e-47 |
| Msa0822500 | Msa0919860 | 0.828021 | 1.132947e-54 | -8.615850e-47 |
| Msa0831110 | Msa0919860 | 0.805258 | 1.455662e-49 | -8.615850e-47 |
| Msa0137480 | Msa0919860 | 0.806288 | 8.846571e-50 | -8.615850e-47 |
| Msa0148080 | Msa0919860 | 0.809987 | 1.441934e-50 | -8.615850e-47 |
| Msa0150860 | Msa0919860 | 0.814278 | 1.670960e-51 | -8.615850e-47 |
| Msa0173690 | Msa0919860 | 0.815346 | 9.691373e-52 | -8.615850e-47 |
| Msa0204960 | Msa0919860 | 0.809414 | 1.915164e-50 | -8.615850e-47 |
| Msa0211150 | Msa0919860 | 0.839213 | 1.812953e-57 | -8.615850e-47 |
| Msa0219590 | Msa0919860 | 0.802400 | 5.711593e-49 | -8.615850e-47 |
| Msa0236510 | Msa0919860 | -0.833864 | 4.174471e-56 | -8.615850e-47 |
| Msa0388340 | Msa0919860 | 0.819497 | 1.126029e-52 | -8.615850e-47 |
| Msa0391430 | Msa0919860 | 0.806922 | 6.501593e-50 | -8.615850e-47 |
| Msa0422090 | Msa0919860 | 0.820685 | 6.018937e-53 | -8.615850e-47 |
| Msa0454360 | Msa0919860 | 0.853237 | 2.729561e-61 | -8.615850e-47 |
| Msa0460590 | Msa0919860 | 0.804630 | 1.969612e-49 | -8.615850e-47 |
| Msa0471670 | Msa0919860 | 0.804901 | 1.729044e-49 | -8.615850e-47 |
| Msa0240900 | Msa0919860 | 0.820142 | 8.018209e-53 | -8.615850e-47 |
| Msa0240920 | Msa0919860 | 0.824090 | 9.742352e-54 | -8.615850e-47 |
| Msa0249860 | Msa0919860 | 0.827231 | 1.753652e-54 | -8.615850e-47 |
| Msa0257520 | Msa0919860 | 0.806156 | 9.432598e-50 | -8.615850e-47 |
| Msa0259430 | Msa0919860 | 0.804036 | 2.619726e-49 | -8.615850e-47 |
| Msa0267790 | Msa0919860 | 0.800821 | 1.204236e-48 | -8.615850e-47 |
| Msa0271510 | Msa0919860 | 0.812170 | 4.851557e-51 | -8.615850e-47 |
| Msa0277010 | Msa0919860 | -0.857027 | 2.157921e-62 | -8.615850e-47 |
| Msa0305610 | Msa0919860 | 0.810069 | 1.384530e-50 | -8.615850e-47 |
| Msa0317940 | Msa0919860 | 0.803013 | 4.269318e-49 | -8.615850e-47 |
| Msa0317970 | Msa0919860 | 0.826886 | 2.121070e-54 | -8.615850e-47 |
| Msa0318680 | Msa0919860 | 0.841643 | 4.194811e-58 | -8.615850e-47 |
| Msa0321620 | Msa0919860 | 0.810059 | 1.391382e-50 | -8.615850e-47 |
| Msa0325830 | Msa0919860 | 0.808509 | 2.991405e-50 | -8.615850e-47 |
| Msa0326480 | Msa0919860 | 0.801502 | 8.737617e-49 | -8.615850e-47 |
| Msa0530560 | Msa0919860 | 0.808121 | 3.619304e-50 | -8.615850e-47 |
| Msa0532990 | Msa0919860 | 0.804183 | 2.440626e-49 | -8.615850e-47 |
| Msa0567350 | Msa0919860 | 0.813480 | 2.505208e-51 | -8.615850e-47 |
| Msa0572840 | Msa0919860 | 0.814125 | 1.806139e-51 | -8.615850e-47 |
| Msa0589260 | Msa0919860 | -0.800206 | 1.606712e-48 | -8.615850e-47 |
| Msa0858390 | Msa0919860 | 0.816240 | 6.123289e-52 | -8.615850e-47 |
| Msa0878220 | Msa0919860 | 0.815822 | 7.591841e-52 | -8.615850e-47 |
| Msa0919860 | Msa0931520 | 0.806233 | 9.087747e-50 | -8.615850e-47 |
| Msa0919860 | Msa0945630 | 0.804076 | 2.569153e-49 | -8.615850e-47 |
| Msa0919860 | Msa0967170 | 0.878064 | 3.797962e-69 | -8.615850e-47 |
| Msa0919860 | Msa1077130 | 0.809981 | 1.446446e-50 | -8.615850e-47 |
| Msa0919860 | Msa1078170 | 0.807614 | 4.638233e-50 | -8.615850e-47 |
| Msa0919860 | Msa1089450 | 0.806355 | 8.564448e-50 | -8.615850e-47 |
| Msa0919860 | Msa1089460 | 0.803124 | 4.048478e-49 | -8.615850e-47 |
| Msa0919860 | Msa1101090 | 0.820869 | 5.459751e-53 | -8.615850e-47 |
| Msa0919860 | Msa1102320 | 0.809680 | 1.678526e-50 | -8.615850e-47 |
| Msa0919860 | Msa1121700 | 0.823082 | 1.677010e-53 | -8.615850e-47 |
| Msa0919860 | Msa1142020 | 0.802556 | 5.304794e-49 | -8.615850e-47 |
| Msa0919860 | Msa1145810 | 0.802467 | 5.533433e-49 | -8.615850e-47 |
| Msa0919860 | Msa1175200 | 0.804778 | 1.834348e-49 | -8.615850e-47 |
| Msa0919860 | Msa1181910 | 0.800955 | 1.130620e-48 | -8.615850e-47 |
| Msa0919860 | Msa1184910 | 0.831681 | 1.454097e-55 | -8.615850e-47 |
| Msa0919860 | Msa1204630 | 0.802927 | 4.447036e-49 | -8.615850e-47 |
| Msa0919860 | Msa1205280 | 0.832770 | 7.819186e-56 | -8.615850e-47 |
| Msa0919860 | Msa1211230 | -0.810775 | 9.748697e-51 | -8.615850e-47 |
| Msa0919860 | Msa1211420 | -0.845139 | 4.891350e-59 | -8.615850e-47 |
| Msa0919860 | Msa1243490 | 0.824105 | 9.667437e-54 | -8.615850e-47 |
| Msa0919860 | Msa1246360 | 0.839991 | 1.137457e-57 | -8.615850e-47 |
| Msa0919860 | Msa1297050 | -0.803843 | 2.872454e-49 | -8.615850e-47 |
| Msa0919860 | Msa1297230 | 0.804249 | 2.364700e-49 | -8.615850e-47 |
| Msa0919860 | Msa1305810 | 0.816576 | 5.151196e-52 | -8.615850e-47 |
| Msa0919860 | Msa1308870 | 0.804215 | 2.404048e-49 | -8.615850e-47 |
| Msa0919860 | Msa1314650 | 0.802937 | 4.425339e-49 | -8.615850e-47 |
| Msa0919860 | Msa1325410 | -0.820925 | 5.301689e-53 | -8.615850e-47 |
| Msa0919860 | Msa1345100 | 0.834885 | 2.314184e-56 | -8.615850e-47 |
| Msa0919860 | Msa1346840 | 0.835419 | 1.696631e-56 | -8.615850e-47 |
| Msa0919860 | Msa1347310 | 0.812818 | 3.501876e-51 | -8.615850e-47 |
| Msa0919860 | Msa1393570 | 0.837851 | 4.071718e-57 | -8.615850e-47 |
| Msa0919860 | Msa1400870 | -0.800747 | 1.246742e-48 | -8.615850e-47 |
| Msa0919860 | Msa1419690 | 0.833575 | 4.928545e-56 | -8.615850e-47 |
| Msa0919860 | Msa1448560 | 0.806587 | 7.652274e-50 | -8.615850e-47 |
| Msa0919860 | Msa1452710 | 0.838629 | 2.567232e-57 | -8.615850e-47 |
| Msa0919860 | Msa1458770 | 0.803850 | 2.863810e-49 | -8.615850e-47 |
| Msa0919860 | Msa1463900 | 0.812432 | 4.252596e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919860 | MtrunA17_Chr6g0476061 | 93.195 | 338 | 4 | 1 | 1 | 338 | 1 | 319 | 0.0 | 620 |
| Msa0919860 | MtrunA17_Chr1g0188211 | 51.831 | 355 | 122 | 13 | 1 | 336 | 1 | 325 | 1.10e-86 | 264 |
| Msa0919860 | MtrunA17_Chr7g0245841 | 39.945 | 363 | 159 | 9 | 1 | 338 | 1 | 329 | 5.03e-50 | 169 |
| Msa0919860 | MtrunA17_Chr6g0476241 | 42.500 | 240 | 89 | 8 | 43 | 279 | 112 | 305 | 6.75e-41 | 145 |
| Msa0919860 | MtrunA17_Chr4g0056761 | 47.737 | 243 | 89 | 7 | 43 | 277 | 64 | 276 | 4.14e-40 | 144 |
| Msa0919860 | MtrunA17_Chr8g0351761 | 57.143 | 140 | 56 | 2 | 147 | 282 | 140 | 279 | 5.14e-36 | 133 |
| Msa0919860 | MtrunA17_Chr1g0179461 | 38.492 | 252 | 108 | 6 | 51 | 288 | 69 | 287 | 8.72e-34 | 127 |
| Msa0919860 | MtrunA17_Chr4g0054661 | 36.905 | 252 | 114 | 6 | 51 | 287 | 73 | 294 | 7.76e-31 | 119 |
| Msa0919860 | MtrunA17_Chr5g0397551 | 34.364 | 291 | 137 | 8 | 1 | 272 | 1 | 256 | 8.29e-29 | 113 |
| Msa0919860 | MtrunA17_Chr7g0247431 | 38.340 | 253 | 115 | 7 | 29 | 279 | 74 | 287 | 3.83e-27 | 109 |
| Msa0919860 | MtrunA17_Chr5g0398621 | 42.771 | 166 | 83 | 3 | 131 | 284 | 74 | 239 | 1.04e-26 | 105 |
| Msa0919860 | MtrunA17_Chr8g0349091 | 45.833 | 144 | 75 | 1 | 134 | 274 | 140 | 283 | 1.09e-26 | 108 |
| Msa0919860 | MtrunA17_Chr8g0386741 | 44.275 | 131 | 72 | 1 | 134 | 264 | 151 | 280 | 8.04e-25 | 103 |
| Msa0919860 | MtrunA17_Chr4g0027331 | 52.727 | 110 | 49 | 2 | 152 | 258 | 22 | 131 | 7.80e-23 | 92.4 |
| Msa0919860 | MtrunA17_Chr3g0133051 | 37.500 | 144 | 78 | 3 | 134 | 276 | 93 | 225 | 9.01e-23 | 96.3 |
| Msa0919860 | MtrunA17_Chr7g0274821 | 49.573 | 117 | 56 | 1 | 149 | 265 | 143 | 256 | 1.36e-22 | 97.1 |
| Msa0919860 | MtrunA17_Chr4g0027351 | 53.211 | 109 | 48 | 2 | 152 | 259 | 22 | 128 | 2.40e-22 | 91.3 |
| Msa0919860 | MtrunA17_Chr4g0027371 | 41.333 | 150 | 82 | 3 | 152 | 298 | 22 | 168 | 2.63e-22 | 94.0 |
| Msa0919860 | MtrunA17_Chr1g0190011 | 34.513 | 226 | 107 | 6 | 48 | 269 | 40 | 228 | 5.10e-22 | 94.7 |
| Msa0919860 | MtrunA17_Chr4g0027301 | 40.909 | 132 | 72 | 4 | 138 | 265 | 14 | 143 | 3.77e-18 | 80.1 |
| Msa0919860 | MtrunA17_Chr3g0112131 | 43.966 | 116 | 62 | 1 | 149 | 264 | 106 | 218 | 1.93e-17 | 81.6 |
| Msa0919860 | MtrunA17_Chr5g0427311 | 38.346 | 133 | 74 | 4 | 146 | 276 | 77 | 203 | 2.43e-17 | 80.1 |
| Msa0919860 | MtrunA17_Chr1g0168121 | 38.983 | 118 | 69 | 1 | 147 | 264 | 67 | 181 | 1.74e-14 | 72.8 |
| Msa0919860 | MtrunA17_Chr4g0054651 | 41.379 | 116 | 65 | 1 | 149 | 264 | 103 | 215 | 8.00e-14 | 70.9 |
| Msa0919860 | MtrunA17_Chr7g0250031 | 43.103 | 116 | 63 | 1 | 149 | 264 | 84 | 196 | 1.43e-13 | 70.1 |
| Msa0919860 | MtrunA17_Chr5g0435681 | 41.071 | 112 | 63 | 1 | 153 | 264 | 120 | 228 | 1.88e-13 | 70.1 |
| Msa0919860 | MtrunA17_Chr1g0165101 | 30.924 | 249 | 118 | 7 | 39 | 270 | 73 | 284 | 6.12e-13 | 68.9 |
| Msa0919860 | MtrunA17_Chr5g0398531 | 41.379 | 116 | 65 | 1 | 149 | 264 | 127 | 239 | 1.62e-12 | 67.4 |
| Msa0919860 | MtrunA17_Chr5g0417581 | 38.889 | 108 | 64 | 2 | 152 | 258 | 22 | 128 | 3.03e-12 | 64.7 |
| Msa0919860 | MtrunA17_Chr1g0190051 | 38.793 | 116 | 68 | 1 | 149 | 264 | 101 | 213 | 3.60e-12 | 66.2 |
| Msa0919860 | MtrunA17_Chr8g0351651 | 39.655 | 116 | 67 | 1 | 149 | 264 | 113 | 225 | 4.69e-12 | 65.9 |
| Msa0919860 | MtrunA17_Chr5g0443311 | 39.496 | 119 | 65 | 2 | 149 | 265 | 78 | 191 | 5.41e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919860 | AT5G62260.1 | 51.681 | 238 | 83 | 8 | 50 | 276 | 75 | 291 | 8.11e-59 | 195 |
| Msa0919860 | AT5G62260.3 | 51.681 | 238 | 83 | 8 | 50 | 276 | 75 | 291 | 8.11e-59 | 195 |
| Msa0919860 | AT4G25320.1 | 46.415 | 265 | 120 | 5 | 38 | 300 | 73 | 317 | 3.82e-57 | 191 |
| Msa0919860 | AT5G62260.2 | 52.000 | 225 | 80 | 7 | 50 | 267 | 75 | 278 | 6.19e-57 | 186 |
| Msa0919860 | AT5G51590.1 | 51.948 | 231 | 85 | 5 | 49 | 265 | 76 | 294 | 1.77e-51 | 176 |
| Msa0919860 | AT4G12080.1 | 47.303 | 241 | 102 | 6 | 50 | 283 | 88 | 310 | 5.28e-50 | 171 |
| Msa0919860 | AT4G00200.2 | 47.638 | 254 | 89 | 9 | 38 | 283 | 43 | 260 | 1.73e-45 | 157 |
| Msa0919860 | AT4G00200.1 | 47.638 | 254 | 89 | 9 | 38 | 283 | 43 | 260 | 1.73e-45 | 157 |
| Msa0919860 | AT2G33620.1 | 43.882 | 237 | 97 | 5 | 50 | 284 | 96 | 298 | 2.85e-40 | 145 |
| Msa0919860 | AT2G33620.4 | 43.882 | 237 | 97 | 5 | 50 | 284 | 96 | 298 | 2.85e-40 | 145 |
| Msa0919860 | AT2G33620.2 | 43.882 | 237 | 97 | 5 | 50 | 284 | 96 | 298 | 2.85e-40 | 145 |
| Msa0919860 | AT2G33620.3 | 43.882 | 237 | 97 | 5 | 50 | 284 | 96 | 298 | 2.85e-40 | 145 |
| Msa0919860 | AT4G22770.2 | 41.667 | 252 | 115 | 5 | 50 | 293 | 71 | 298 | 7.15e-39 | 140 |
| Msa0919860 | AT4G22770.1 | 41.667 | 252 | 115 | 5 | 50 | 293 | 71 | 298 | 7.15e-39 | 140 |
| Msa0919860 | AT4G17950.1 | 48.031 | 127 | 64 | 1 | 149 | 273 | 221 | 347 | 4.76e-30 | 119 |
| Msa0919860 | AT5G46640.1 | 39.565 | 230 | 119 | 3 | 48 | 277 | 99 | 308 | 2.37e-29 | 116 |
| Msa0919860 | AT2G45850.1 | 46.154 | 130 | 67 | 1 | 148 | 274 | 161 | 290 | 6.65e-29 | 114 |
| Msa0919860 | AT2G45850.2 | 46.154 | 130 | 67 | 1 | 148 | 274 | 161 | 290 | 6.65e-29 | 114 |
| Msa0919860 | AT1G63470.1 | 50.862 | 116 | 56 | 1 | 149 | 264 | 177 | 291 | 3.56e-28 | 113 |
| Msa0919860 | AT3G04590.1 | 46.281 | 121 | 62 | 1 | 149 | 269 | 171 | 288 | 3.27e-27 | 109 |
| Msa0919860 | AT3G04590.2 | 48.276 | 116 | 57 | 1 | 149 | 264 | 171 | 283 | 5.55e-27 | 110 |
| Msa0919860 | AT2G45850.3 | 47.009 | 117 | 62 | 0 | 148 | 264 | 161 | 277 | 1.19e-26 | 107 |
| Msa0919860 | AT1G63480.2 | 44.828 | 116 | 63 | 1 | 149 | 264 | 160 | 274 | 2.28e-24 | 102 |
| Msa0919860 | AT1G63480.1 | 44.828 | 116 | 63 | 1 | 149 | 264 | 160 | 274 | 2.28e-24 | 102 |
| Msa0919860 | AT1G63480.5 | 44.828 | 116 | 63 | 1 | 149 | 264 | 154 | 268 | 2.45e-24 | 102 |
| Msa0919860 | AT1G63480.7 | 44.828 | 116 | 63 | 1 | 149 | 264 | 154 | 268 | 2.45e-24 | 102 |
| Msa0919860 | AT1G63480.4 | 44.828 | 116 | 63 | 1 | 149 | 264 | 154 | 268 | 2.45e-24 | 102 |
| Msa0919860 | AT1G63480.3 | 44.828 | 116 | 63 | 1 | 149 | 264 | 154 | 268 | 2.45e-24 | 102 |
| Msa0919860 | AT1G63480.6 | 44.828 | 116 | 63 | 1 | 149 | 264 | 154 | 268 | 2.45e-24 | 102 |
| Msa0919860 | AT3G61310.1 | 38.554 | 166 | 85 | 2 | 148 | 296 | 163 | 328 | 5.20e-24 | 101 |
| Msa0919860 | AT5G49700.1 | 38.519 | 135 | 75 | 3 | 146 | 276 | 80 | 210 | 4.61e-20 | 89.0 |
| Msa0919860 | AT2G36560.1 | 37.324 | 142 | 87 | 2 | 136 | 275 | 92 | 233 | 3.67e-18 | 85.9 |
| Msa0919860 | AT1G14490.1 | 36.076 | 158 | 86 | 4 | 145 | 298 | 26 | 172 | 3.43e-16 | 76.6 |
| Msa0919860 | AT4G14465.1 | 43.103 | 116 | 63 | 1 | 149 | 264 | 94 | 206 | 4.30e-16 | 77.8 |
| Msa0919860 | AT1G14490.2 | 38.235 | 136 | 76 | 3 | 145 | 276 | 45 | 176 | 7.44e-16 | 76.3 |
| Msa0919860 | AT2G35270.1 | 43.333 | 120 | 61 | 2 | 147 | 264 | 103 | 217 | 4.11e-15 | 75.1 |
| Msa0919860 | AT3G60870.1 | 37.069 | 116 | 68 | 2 | 149 | 264 | 86 | 196 | 1.38e-13 | 70.5 |
| Msa0919860 | AT4G17800.1 | 39.831 | 118 | 68 | 1 | 147 | 264 | 107 | 221 | 2.42e-13 | 70.1 |
| Msa0919860 | AT3G55560.1 | 40.517 | 116 | 67 | 2 | 149 | 264 | 115 | 228 | 3.21e-13 | 69.7 |
| Msa0919860 | AT1G76500.1 | 36.800 | 125 | 67 | 2 | 149 | 264 | 99 | 220 | 3.39e-13 | 69.7 |
| Msa0919860 | AT2G42940.1 | 35.897 | 117 | 72 | 1 | 149 | 265 | 80 | 193 | 8.51e-12 | 65.1 |
| Msa0919860 | AT5G28590.1 | 36.000 | 125 | 56 | 2 | 149 | 273 | 30 | 130 | 9.94e-12 | 64.3 |
Find 103 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGTGATTTATGAGAATT+AGG | 0.142788 | 6_2:-53154410 | None:intergenic |
| ATTATTATATTAATGGTTTA+TGG | 0.148949 | 6_2:+53161054 | Msa0919860:three_prime_UTR |
| ACCTAACATTATTATATTAA+TGG | 0.161673 | 6_2:+53161047 | Msa0919860:three_prime_UTR |
| CTTCCAGATTCACTCTTTCT+AGG | 0.207106 | 6_2:-53154956 | None:intergenic |
| GGGTGCACTGGCTGGTTTGC+TGG | 0.209879 | 6_2:+53159645 | Msa0919860:CDS |
| TGATCGACCCTTTGCCTCTT+TGG | 0.215283 | 6_2:-53160568 | None:intergenic |
| ATTATGTACTAGTAGGTATT+TGG | 0.240019 | 6_2:+53160901 | Msa0919860:three_prime_UTR |
| GGCCCCACCTGGCTTCAATT+TGG | 0.255143 | 6_2:+53154838 | Msa0919860:CDS |
| CTCTTTGGATTCTCCTTCTC+TGG | 0.284566 | 6_2:-53160553 | None:intergenic |
| TGGTTGTAGCAAGTAGATTT+AGG | 0.285005 | 6_2:+53160942 | Msa0919860:three_prime_UTR |
| GTCAAGCATGAGCATCTTAA+TGG | 0.290935 | 6_2:-53160781 | None:intergenic |
| AACGGAATGGAAGCCGAAAT+TGG | 0.321360 | 6_2:-53155001 | None:intergenic |
| ATTGTTATAAATTCTAAATA+AGG | 0.335255 | 6_2:-53160983 | None:intergenic |
| TTCGGCAATGGCCAAGGCTC+TGG | 0.357930 | 6_2:+53160715 | Msa0919860:CDS |
| ACCATTAATATAATAATGTT+AGG | 0.371921 | 6_2:-53161048 | None:intergenic |
| CATGTGCTTACTGTAAATTC+TGG | 0.373117 | 6_2:+53157125 | Msa0919860:CDS |
| AGTGGTGGTGGTGGAGGTGG+AGG | 0.384533 | 6_2:+53155049 | Msa0919860:CDS |
| TTGTTATATTATGTACTAGT+AGG | 0.384545 | 6_2:+53160894 | Msa0919860:three_prime_UTR |
| GGTTAAATGCAGCTCTGATA+TGG | 0.385085 | 6_2:+53160922 | Msa0919860:three_prime_UTR |
| GAAGAATTGAGAACTGATAT+TGG | 0.391643 | 6_2:+53160646 | Msa0919860:CDS |
| CGGAAATTGTTAGGCGCAGC+CGG | 0.400804 | 6_2:+53155603 | Msa0919860:intron |
| AATATCAGTTCTCAATTCTT+CGG | 0.403456 | 6_2:-53160644 | None:intergenic |
| AGAGTGATTTATGAGAATTA+GGG | 0.403606 | 6_2:-53154409 | None:intergenic |
| CTCTTTAGAATCTGTAAACT+AGG | 0.406141 | 6_2:+53154428 | Msa0919860:five_prime_UTR |
| AAAAGTGGTGGTGGTGGAGG+TGG | 0.408449 | 6_2:+53155046 | Msa0919860:CDS |
| GTTGTCACCGATGCCAATTT+CGG | 0.412586 | 6_2:+53154988 | Msa0919860:CDS |
| TGGGTCCACTGGAGAGTTAC+CGG | 0.422219 | 6_2:+53154883 | Msa0919860:CDS |
| AACTTTGCTTCTTTCGGCAA+TGG | 0.426973 | 6_2:+53160703 | Msa0919860:CDS |
| TGGCGGTACTTCAACGTATG+AGG | 0.428599 | 6_2:+53158691 | Msa0919860:CDS |
| TGGAAAAGTGGTGGTGGTGG+AGG | 0.429615 | 6_2:+53155043 | Msa0919860:CDS |
| TCGGCTTCCATTCCGTTGAC+CGG | 0.436479 | 6_2:+53155007 | Msa0919860:CDS |
| CACTGGAGAGTTACCGGCTC+CGG | 0.437007 | 6_2:+53154889 | Msa0919860:CDS |
| ATGGTTTATGGTTGTGAAAG+TGG | 0.437892 | 6_2:+53161066 | Msa0919860:three_prime_UTR |
| AGGCCTAGAAAGAGTGAATC+TGG | 0.438792 | 6_2:+53154953 | Msa0919860:CDS |
| GGTTGGAAAAGTGGTGGTGG+TGG | 0.438943 | 6_2:+53155040 | Msa0919860:CDS |
| GCTCCGGTGCCGGCTGGCGG+TGG | 0.440060 | 6_2:+53154905 | Msa0919860:CDS |
| GCTGGTTTGCTGGTAGCTGC+TGG | 0.440446 | 6_2:+53159655 | Msa0919860:CDS |
| TCAGGTTGGAAAAGTGGTGG+TGG | 0.447028 | 6_2:+53155037 | Msa0919860:CDS |
| GGTTTCTTAATTGATTCAAA+TGG | 0.447685 | 6_2:-53155082 | None:intergenic |
| CCGCCAGCCGGCACCGGAGC+CGG | 0.450917 | 6_2:-53154902 | None:intergenic |
| GAGGCAAAGGGTCGATCATT+CGG | 0.452684 | 6_2:+53160573 | Msa0919860:CDS |
| AAACCGGCCGGTGACATGAT+AGG | 0.454468 | 6_2:-53160679 | None:intergenic |
| TCATTTGTGCCAACTGAGAA+TGG | 0.458331 | 6_2:+53159556 | Msa0919860:CDS |
| TCAAAATCATTCAACTTCAA+AGG | 0.462507 | 6_2:-53155103 | None:intergenic |
| TTACCGGCTCCGGTGCCGGC+TGG | 0.462631 | 6_2:+53154899 | Msa0919860:CDS |
| GGATTGACAAAGAGCAGATC+TGG | 0.464623 | 6_2:+53159577 | Msa0919860:CDS |
| TTTGTCAATCCATTCTCAGT+TGG | 0.465539 | 6_2:-53159565 | None:intergenic |
| ATAGGTGGAATCGCACGTTT+CGG | 0.470546 | 6_2:+53155648 | Msa0919860:CDS |
| GCTTCTTTCGGCAATGGCCA+AGG | 0.472594 | 6_2:+53160709 | Msa0919860:CDS |
| GCCGCGAAAACGCGTGGAAT+AGG | 0.480934 | 6_2:+53155630 | Msa0919860:CDS |
| GTCTCATTGGCAGGTCCAAA+TGG | 0.485852 | 6_2:+53159610 | Msa0919860:CDS |
| GTTTGAAATTTGAGTGAATG+TGG | 0.488844 | 6_2:+53161006 | Msa0919860:three_prime_UTR |
| GCATGAGCATCTTAATGGCT+AGG | 0.491227 | 6_2:-53160776 | None:intergenic |
| AGAGTTACCGGCTCCGGTGC+CGG | 0.492329 | 6_2:+53154895 | Msa0919860:CDS |
| GGTGCCGGCTGGCGGTGGTG+TGG | 0.493113 | 6_2:+53154910 | Msa0919860:CDS |
| GAAAGAAGCAAAGTTAAAAC+CGG | 0.494138 | 6_2:-53160695 | None:intergenic |
| ATGATGAGTTTCCAGAGCCT+TGG | 0.498291 | 6_2:-53160726 | None:intergenic |
| CCGGCTCCGGTGCCGGCTGG+CGG | 0.504947 | 6_2:+53154902 | Msa0919860:CDS |
| AGGTGAAGAAGAAGAGGGGC+AGG | 0.505369 | 6_2:+53154933 | Msa0919860:CDS |
| TGGTAGAATGAGTGTCTCAT+TGG | 0.507910 | 6_2:+53159597 | Msa0919860:CDS |
| GGTAGCTGCTGGTTCTGTGC+AGG | 0.510940 | 6_2:+53159666 | Msa0919860:CDS |
| AGGAGAATCCAAAGAGGCAA+AGG | 0.520838 | 6_2:+53160560 | Msa0919860:CDS |
| AGAATGAGTGTCTCATTGGC+AGG | 0.525010 | 6_2:+53159601 | Msa0919860:CDS |
| GCCGGCTGGCGGTGGTGTGG+AGG | 0.527136 | 6_2:+53154913 | Msa0919860:CDS |
| AATGTTAACCAGGCCCCACC+TGG | 0.534870 | 6_2:+53154827 | Msa0919860:CDS |
| GTGTGGAGGTGAAGAAGAAG+AGG | 0.538667 | 6_2:+53154927 | Msa0919860:CDS |
| ACCTCCACACCACCGCCAGC+CGG | 0.543946 | 6_2:-53154914 | None:intergenic |
| ACACCACCGCCAGCCGGCAC+CGG | 0.545267 | 6_2:-53154908 | None:intergenic |
| ATATCTATTCTGTCTGCGAC+TGG | 0.555702 | 6_2:+53158629 | Msa0919860:CDS |
| TAATATGAGATGATGTAGGA+GGG | 0.557130 | 6_2:-53160606 | None:intergenic |
| TGTGGAGGTGAAGAAGAAGA+GGG | 0.558126 | 6_2:+53154928 | Msa0919860:CDS |
| AAAATCTCCGGTCAACGGAA+TGG | 0.558235 | 6_2:-53155014 | None:intergenic |
| TTTGAGATTCTTTCCTTGAG+CGG | 0.558315 | 6_2:+53159532 | Msa0919860:CDS |
| CATGAGCATCTTAATGGCTA+GGG | 0.563864 | 6_2:-53160775 | None:intergenic |
| TACCGCCACAAGCATCCGAC+TGG | 0.566838 | 6_2:-53158676 | None:intergenic |
| GAATGTAACACTTCGCCAGT+CGG | 0.569594 | 6_2:+53158661 | Msa0919860:CDS |
| TTAATATGAGATGATGTAGG+AGG | 0.569764 | 6_2:-53160607 | None:intergenic |
| TGGCACAAATGAGCCGCTCA+AGG | 0.571234 | 6_2:-53159545 | None:intergenic |
| AGCCAAATTGAAGCCAGGTG+GGG | 0.575359 | 6_2:-53154840 | None:intergenic |
| TCTTTAGAATCTGTAAACTA+GGG | 0.576438 | 6_2:+53154429 | Msa0919860:five_prime_UTR |
| GAGCCAAATTGAAGCCAGGT+GGG | 0.578975 | 6_2:-53154841 | None:intergenic |
| TTATAGTCAAGAGAATCAAA+CGG | 0.582782 | 6_2:-53160867 | None:intergenic |
| TTATTAATATGAGATGATGT+AGG | 0.582862 | 6_2:-53160610 | None:intergenic |
| GTGGAGGTGAAGAAGAAGAG+GGG | 0.585769 | 6_2:+53154929 | Msa0919860:CDS |
| GGAATCGCCGCGAAAACGCG+TGG | 0.587261 | 6_2:+53155624 | Msa0919860:CDS |
| GGAGAATCCAAAGAGGCAAA+GGG | 0.588037 | 6_2:+53160561 | Msa0919860:CDS |
| GAGTGAATCTGGAAGTAAGC+CGG | 0.592179 | 6_2:+53154964 | Msa0919860:CDS |
| GCATGCTGTTAATGTTAACC+AGG | 0.592649 | 6_2:+53154817 | Msa0919860:CDS |
| GCGAAAACGCGTGGAATAGG+TGG | 0.596311 | 6_2:+53155633 | Msa0919860:CDS |
| ATTGGCATCGGTGACAACGC+CGG | 0.600825 | 6_2:-53154983 | None:intergenic |
| AATATGAGATGATGTAGGAG+GGG | 0.606351 | 6_2:-53160605 | None:intergenic |
| AATGAAGCCTATCATGTCAC+CGG | 0.606781 | 6_2:+53160672 | Msa0919860:CDS |
| GAAGCAAAGTTAAAACCGGC+CGG | 0.607612 | 6_2:-53160691 | None:intergenic |
| CGCCAGTCGGATGCTTGTGG+CGG | 0.616878 | 6_2:+53158674 | Msa0919860:CDS |
| GGTGGAATCGCACGTTTCGG+CGG | 0.631569 | 6_2:+53155651 | Msa0919860:CDS |
| CGGAGCCGGTAACTCTCCAG+TGG | 0.638034 | 6_2:-53154888 | None:intergenic |
| TGAGCCAAATTGAAGCCAGG+TGG | 0.640774 | 6_2:-53154842 | None:intergenic |
| ATGGAAGCCGAAATTGGCAT+CGG | 0.640906 | 6_2:-53154995 | None:intergenic |
| TGGAAACTCATCATCATCTG+CGG | 0.652342 | 6_2:+53160735 | Msa0919860:CDS |
| GAATTGAGAACTGATATTGG+TGG | 0.652922 | 6_2:+53160649 | Msa0919860:CDS |
| GATGATGTAGGAGGGGCAGT+TGG | 0.671450 | 6_2:-53160598 | None:intergenic |
| GCTTACTGTAAATTCTGGAG+AGG | 0.684124 | 6_2:+53157130 | Msa0919860:CDS |
| CAGAGAAGGAGAATCCAAAG+AGG | 0.687576 | 6_2:+53160554 | Msa0919860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTATTAATAAATATT+TGG | - | chr6_2:53155932-53155951 | None:intergenic | 0.0% |
| !!! | TAATAATTAATTGGTTTAAT+GGG | - | chr6_2:53155813-53155832 | None:intergenic | 10.0% |
| !! | ACAATTAACTAATAATTAAT+TGG | - | chr6_2:53155822-53155841 | None:intergenic | 10.0% |
| !!! | ATTAATAAATATTTGGTAAT+TGG | - | chr6_2:53155925-53155944 | None:intergenic | 10.0% |
| !!! | TTATTGATTAATAACTATAT+TGG | + | chr6_2:53155947-53155966 | Msa0919860:intron | 10.0% |
| !!! | TTAACATAGAAAAATATTTT+GGG | - | chr6_2:53156016-53156035 | None:intergenic | 10.0% |
| !!! | ATATCATATATTTTAAAAAG+GGG | - | chr6_2:53157346-53157365 | None:intergenic | 10.0% |
| !! | TACAATTAACAAATATATTT+GGG | - | chr6_2:53158533-53158552 | None:intergenic | 10.0% |
| !! | ATACAATTAACAAATATATT+TGG | - | chr6_2:53158534-53158553 | None:intergenic | 10.0% |
| !! | TAAAAAATTGTAAAAGAAAA+TGG | + | chr6_2:53160423-53160442 | Msa0919860:intron | 10.0% |
| !! | ATTGTTATAAATTCTAAATA+AGG | - | chr6_2:53160986-53161005 | None:intergenic | 10.0% |
| !! | ATTATTATATTAATGGTTTA+TGG | + | chr6_2:53161054-53161073 | Msa0919860:three_prime_UTR | 10.0% |
| !!! | CTAATAATTAATTGGTTTAA+TGG | - | chr6_2:53155814-53155833 | None:intergenic | 15.0% |
| !!! | AAAATAAAACGAGTATTTTT+GGG | - | chr6_2:53155857-53155876 | None:intergenic | 15.0% |
| !!! | AAAAATAAAACGAGTATTTT+TGG | - | chr6_2:53155858-53155877 | None:intergenic | 15.0% |
| !!! | CTTAACATAGAAAAATATTT+TGG | - | chr6_2:53156017-53156036 | None:intergenic | 15.0% |
| !!! | TGCAATAATATAAATTTTGT+AGG | + | chr6_2:53156075-53156094 | Msa0919860:intron | 15.0% |
| !! | GTAAATGATATTATTTGATT+CGG | + | chr6_2:53156253-53156272 | Msa0919860:intron | 15.0% |
| !!! | TCATTTTTTCAAATTTTTAC+CGG | + | chr6_2:53156518-53156537 | Msa0919860:intron | 15.0% |
| !!! | TCTAAATATTTTCAGAATAT+AGG | - | chr6_2:53157178-53157197 | None:intergenic | 15.0% |
| !! | TTTATATTAGATTGTAAATC+CGG | - | chr6_2:53157323-53157342 | None:intergenic | 15.0% |
| !!! | TTTAAAACTTCACATTAATT+CGG | + | chr6_2:53158763-53158782 | Msa0919860:intron | 15.0% |
| !! | TTAAATGAAAGAAAAACTTA+GGG | + | chr6_2:53160206-53160225 | Msa0919860:intron | 15.0% |
| !!! | TTCATTTTAAATTGCTAAAA+AGG | + | chr6_2:53160280-53160299 | Msa0919860:intron | 15.0% |
| !!! | TTTTCATTGTTTACAAAAAA+AGG | - | chr6_2:53160357-53160376 | None:intergenic | 15.0% |
| !! | ACCTAACATTATTATATTAA+TGG | + | chr6_2:53161047-53161066 | Msa0919860:three_prime_UTR | 15.0% |
| !! | ACCATTAATATAATAATGTT+AGG | - | chr6_2:53161051-53161070 | None:intergenic | 15.0% |
| !!! | TTAGAAATTTTTGTGTTTCT+GGG | + | chr6_2:53154659-53154678 | Msa0919860:five_prime_UTR | 20.0% |
| !!! | TTTTGAAGATTTTCAGATTT+TGG | + | chr6_2:53154730-53154749 | Msa0919860:five_prime_UTR | 20.0% |
| !!! | TTTGAAGATTTTCAGATTTT+GGG | + | chr6_2:53154731-53154750 | Msa0919860:five_prime_UTR | 20.0% |
| !!! | TTTGATTCTGAGAAAAAAAA+TGG | + | chr6_2:53154769-53154788 | Msa0919860:exon | 20.0% |
| !!! | TTATGTGTTATGTTTTGTTT+TGG | + | chr6_2:53155303-53155322 | Msa0919860:intron | 20.0% |
| !!! | TTTTTAAGTTTTTCAAAGCT+GGG | - | chr6_2:53155725-53155744 | None:intergenic | 20.0% |
| !!! | TTTTTTAAGTTTTTCAAAGC+TGG | - | chr6_2:53155726-53155745 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr6_2:53156347-53156366 | None:intergenic | 20.0% |
| !! | AATCACATAATTATATGTGT+CGG | + | chr6_2:53156362-53156381 | Msa0919860:intron | 20.0% |
| !! | TTATGACATATTGCTAAATA+AGG | + | chr6_2:53156621-53156640 | Msa0919860:intron | 20.0% |
| !! | TTATATTAGATTGTAAATCC+GGG | - | chr6_2:53157322-53157341 | None:intergenic | 20.0% |
| !! | TTTATTACCACAAAAATTGT+CGG | - | chr6_2:53157406-53157425 | None:intergenic | 20.0% |
| !! | CTCAAGGTTAAAAAAAAAAA+AGG | - | chr6_2:53157787-53157806 | None:intergenic | 20.0% |
| !!! | TTTGTTCATATTGACTTAAT+TGG | + | chr6_2:53157824-53157843 | Msa0919860:intron | 20.0% |
| !!! | ACTTAATTGGTTTTTCAATT+TGG | + | chr6_2:53157837-53157856 | Msa0919860:intron | 20.0% |
| !!! | AAATACTAGGTTTTTCAATT+TGG | - | chr6_2:53158046-53158065 | None:intergenic | 20.0% |
| !! | CCTTAAAATAATAAAGAAAC+CGG | + | chr6_2:53158363-53158382 | Msa0919860:intron | 20.0% |
| !! | TGGTAATAAAAAAAGTGAAA+TGG | - | chr6_2:53158430-53158449 | None:intergenic | 20.0% |
| !! | TGAAAGGAGAAAAAAAAAAA+CGG | - | chr6_2:53158464-53158483 | None:intergenic | 20.0% |
| !! | GTACTTTCTTTATATTAGTA+TGG | + | chr6_2:53158490-53158509 | Msa0919860:intron | 20.0% |
| !! | AACAAATATATTTGGGTATT+GGG | - | chr6_2:53158526-53158545 | None:intergenic | 20.0% |
| !! | TAACAAATATATTTGGGTAT+TGG | - | chr6_2:53158527-53158546 | None:intergenic | 20.0% |
| !!! | CATAAAAAGTATTGAAACTA+GGG | - | chr6_2:53159003-53159022 | None:intergenic | 20.0% |
| !!! | TCATAAAAAGTATTGAAACT+AGG | - | chr6_2:53159004-53159023 | None:intergenic | 20.0% |
| !! | TATTAAATTATTACCTGTGT+CGG | - | chr6_2:53159076-53159095 | None:intergenic | 20.0% |
| !! | ATGAAACCATCAAATAAAAA+GGG | + | chr6_2:53159476-53159495 | Msa0919860:intron | 20.0% |
| !! | CTTAAATGAAAGAAAAACTT+AGG | + | chr6_2:53160205-53160224 | Msa0919860:intron | 20.0% |
| !!! | TTTAAAATGAAAACAGATGT+TGG | - | chr6_2:53160271-53160290 | None:intergenic | 20.0% |
| !! | GAAAATGGTTAGAAAAATAT+TGG | + | chr6_2:53160438-53160457 | Msa0919860:intron | 20.0% |
| !! | TTATTAATATGAGATGATGT+AGG | - | chr6_2:53160613-53160632 | None:intergenic | 20.0% |
| !! | AAAAACTTTAATCTCTTCAT+CGG | - | chr6_2:53160830-53160849 | None:intergenic | 20.0% |
| !! | TTGTTATATTATGTACTAGT+AGG | + | chr6_2:53160894-53160913 | Msa0919860:three_prime_UTR | 20.0% |
| ! | AGAGTGATTTATGAGAATTA+GGG | - | chr6_2:53154412-53154431 | None:intergenic | 25.0% |
| ! | AAGAGTGATTTATGAGAATT+AGG | - | chr6_2:53154413-53154432 | None:intergenic | 25.0% |
| !!! | TCTTTAGAATCTGTAAACTA+GGG | + | chr6_2:53154429-53154448 | Msa0919860:five_prime_UTR | 25.0% |
| !!! | AGCAGATTTTTCAATTTTGA+TGG | - | chr6_2:53154584-53154603 | None:intergenic | 25.0% |
| ! | AAAATTGAAAAATCTGCTTC+TGG | + | chr6_2:53154586-53154605 | Msa0919860:five_prime_UTR | 25.0% |
| ! | AAATTGAAAAATCTGCTTCT+GGG | + | chr6_2:53154587-53154606 | Msa0919860:five_prime_UTR | 25.0% |
| !! | GTTAGAAATTTTTGTGTTTC+TGG | + | chr6_2:53154658-53154677 | Msa0919860:five_prime_UTR | 25.0% |
| !! | AAAATACGTTGAATTTTGCT+GGG | + | chr6_2:53154864-53154883 | Msa0919860:CDS | 25.0% |
| !! | GGTTTCTTAATTGATTCAAA+TGG | - | chr6_2:53155085-53155104 | None:intergenic | 25.0% |
| ! | TCAAAATCATTCAACTTCAA+AGG | - | chr6_2:53155106-53155125 | None:intergenic | 25.0% |
| !!! | AAGTTGAATGATTTTGATGA+AGG | + | chr6_2:53155109-53155128 | Msa0919860:CDS | 25.0% |
| !! | AGTTTTACTGTTACATTTGT+TGG | + | chr6_2:53155237-53155256 | Msa0919860:intron | 25.0% |
| !!! | TTTGGATTTGATTTGATTCA+TGG | + | chr6_2:53155321-53155340 | Msa0919860:intron | 25.0% |
| !! | CTTCAATTTAAGATCTGAAA+GGG | - | chr6_2:53155383-53155402 | None:intergenic | 25.0% |
| !! | TCTTCAATTTAAGATCTGAA+AGG | - | chr6_2:53155384-53155403 | None:intergenic | 25.0% |
| ! | AGATCTTAAATTGAAGATGT+GGG | + | chr6_2:53155387-53155406 | Msa0919860:intron | 25.0% |
| !!! | CAAAAAAAAACGCGTTTTTT+GGG | - | chr6_2:53155760-53155779 | None:intergenic | 25.0% |
| !!! | ACAAAAAAAAACGCGTTTTT+TGG | - | chr6_2:53155761-53155780 | None:intergenic | 25.0% |
| !! | TATTTGGTAATTGGTGTAAT+AGG | - | chr6_2:53155916-53155935 | None:intergenic | 25.0% |
| !!! | CATAGAAAAATATTTTGGGA+AGG | - | chr6_2:53156012-53156031 | None:intergenic | 25.0% |
| !!! | TATTATTTTTTTCCTCTACG+AGG | + | chr6_2:53156230-53156249 | Msa0919860:intron | 25.0% |
| !!! | ATTATTTTTTTCCTCTACGA+GGG | + | chr6_2:53156231-53156250 | Msa0919860:intron | 25.0% |
| ! | ACTAAAAAAATCAGACAACT+AGG | - | chr6_2:53156728-53156747 | None:intergenic | 25.0% |
| !!! | AATGACAGTTTTGATTTATC+TGG | + | chr6_2:53156796-53156815 | Msa0919860:intron | 25.0% |
| ! | ATCTATTTCGCTGATATAAT+TGG | + | chr6_2:53156923-53156942 | Msa0919860:intron | 25.0% |
| ! | ATGACTATGATTTATGCATT+TGG | + | chr6_2:53156985-53157004 | Msa0919860:intron | 25.0% |
| ! | TTTCAGAATATAGGCTTAAA+AGG | - | chr6_2:53157169-53157188 | None:intergenic | 25.0% |
| !! | CATTAAGCTTCTTTTGAATA+TGG | - | chr6_2:53157227-53157246 | None:intergenic | 25.0% |
| ! | CATATTCAAAAGAAGCTTAA+TGG | + | chr6_2:53157225-53157244 | Msa0919860:intron | 25.0% |
| ! | TATATTAGATTGTAAATCCG+GGG | - | chr6_2:53157321-53157340 | None:intergenic | 25.0% |
| !! | TGGTAATAAAAAAAGTGCAA+TGG | + | chr6_2:53157416-53157435 | Msa0919860:intron | 25.0% |
| ! | TAAATGTGAGTGATTAGATT+AGG | - | chr6_2:53157479-53157498 | None:intergenic | 25.0% |
| !!! | GCCAATCGTTTTAATATTAT+CGG | + | chr6_2:53157637-53157656 | Msa0919860:intron | 25.0% |
| ! | ACCGATAATATTAAAACGAT+TGG | - | chr6_2:53157641-53157660 | None:intergenic | 25.0% |
| !! | ACGAAAATTGATGATAAACA+CGG | - | chr6_2:53157713-53157732 | None:intergenic | 25.0% |
| ! | TAAAAGATAGAATCAACTCA+AGG | - | chr6_2:53157803-53157822 | None:intergenic | 25.0% |
| ! | CTCATAAATTGATCATAAAC+AGG | - | chr6_2:53157919-53157938 | None:intergenic | 25.0% |
| ! | CTGTTTATGATCAATTTATG+AGG | + | chr6_2:53157917-53157936 | Msa0919860:intron | 25.0% |
| ! | TCTCATAATTCAGTATTTGT+CGG | - | chr6_2:53157947-53157966 | None:intergenic | 25.0% |
| ! | GAATAAACCGATTATAAACA+TGG | + | chr6_2:53157965-53157984 | Msa0919860:intron | 25.0% |
| ! | ATCCATACCATGTTTATAAT+CGG | - | chr6_2:53157975-53157994 | None:intergenic | 25.0% |
| !!! | TCTTGAAATGTTTTATTTCG+AGG | - | chr6_2:53158254-53158273 | None:intergenic | 25.0% |
| !!! | CCGGTTTCTTTATTATTTTA+AGG | - | chr6_2:53158366-53158385 | None:intergenic | 25.0% |
| ! | TAAAATAATAAAGAAACCGG+CGG | + | chr6_2:53158366-53158385 | Msa0919860:intron | 25.0% |
| !!! | AAGAAAGTACTACAAATGAA+AGG | - | chr6_2:53158480-53158499 | None:intergenic | 25.0% |
| !!! | TTGTATTGTTGATTTTCCTT+TGG | + | chr6_2:53158548-53158567 | Msa0919860:intron | 25.0% |
| ! | TTGATATCTAATGCATACAA+TGG | - | chr6_2:53158846-53158865 | None:intergenic | 25.0% |
| ! | ATGGAATTATGTCAAAACAA+TGG | - | chr6_2:53158960-53158979 | None:intergenic | 25.0% |
| ! | GATGAAACCATCAAATAAAA+AGG | + | chr6_2:53159475-53159494 | Msa0919860:intron | 25.0% |
| ! | TGAAACCATCAAATAAAAAG+GGG | + | chr6_2:53159477-53159496 | Msa0919860:intron | 25.0% |
| !! | AGATATTTATGTGCTTTTAC+AGG | + | chr6_2:53159504-53159523 | Msa0919860:intron | 25.0% |
| !! | GATATTTATGTGCTTTTACA+GGG | + | chr6_2:53159505-53159524 | Msa0919860:intron | 25.0% |
| !! | TAATTAACCTTTGTTGTAGA+AGG | + | chr6_2:53159920-53159939 | Msa0919860:intron | 25.0% |
| !!! | TTCGATGATGCATTATTTTA+CGG | + | chr6_2:53159987-53160006 | Msa0919860:intron | 25.0% |
| !! | ATATTGGTTAATTGAGCTTT+CGG | - | chr6_2:53160031-53160050 | None:intergenic | 25.0% |
| ! | TAACCAATATAATTGCTTCA+TGG | + | chr6_2:53160041-53160060 | Msa0919860:intron | 25.0% |
| ! | GATAGCATTGCATAAAAATA+AGG | - | chr6_2:53160180-53160199 | None:intergenic | 25.0% |
| !! | TTCAAGATTTCTGAAAATGT+TGG | + | chr6_2:53160392-53160411 | Msa0919860:intron | 25.0% |
| ! | AATATCAGTTCTCAATTCTT+CGG | - | chr6_2:53160647-53160666 | None:intergenic | 25.0% |
| ! | TTATAGTCAAGAGAATCAAA+CGG | - | chr6_2:53160870-53160889 | None:intergenic | 25.0% |
| ! | ATTATGTACTAGTAGGTATT+TGG | + | chr6_2:53160901-53160920 | Msa0919860:three_prime_UTR | 25.0% |
| !! | CTCTTTAGAATCTGTAAACT+AGG | + | chr6_2:53154428-53154447 | Msa0919860:five_prime_UTR | 30.0% |
| !!! | ATTTTGGGTTGTGATAGTTT+TGG | + | chr6_2:53154746-53154765 | Msa0919860:five_prime_UTR | 30.0% |
| ! | ATGGAAGAAAGAGAGATTTT+TGG | + | chr6_2:53154788-53154807 | Msa0919860:CDS | 30.0% |
| !!! | AAAGAGAGATTTTTGGTTCT+GGG | + | chr6_2:53154795-53154814 | Msa0919860:CDS | 30.0% |
| ! | CAAAATACGTTGAATTTTGC+TGG | + | chr6_2:53154863-53154882 | Msa0919860:CDS | 30.0% |
| !! | GATGAAGGTAATTTTGATGA+AGG | + | chr6_2:53155124-53155143 | Msa0919860:CDS | 30.0% |
| !! | TGAAGGTACATGACAATTTT+AGG | + | chr6_2:53155141-53155160 | Msa0919860:intron | 30.0% |
| AAACTAACTAACCAGATCAA+AGG | - | chr6_2:53155188-53155207 | None:intergenic | 30.0% | |
| TTTGATTCATGGTTTAGAAG+TGG | + | chr6_2:53155332-53155351 | Msa0919860:intron | 30.0% | |
| CAGATCTTAAATTGAAGATG+TGG | + | chr6_2:53155386-53155405 | Msa0919860:intron | 30.0% | |
| GATCTTAAATTGAAGATGTG+GGG | + | chr6_2:53155388-53155407 | Msa0919860:intron | 30.0% | |
| TGTTGTTGTATAGTAATGTG+AGG | + | chr6_2:53155490-53155509 | Msa0919860:intron | 30.0% | |
| !!! | TAAAACGAGTATTTTTGGGA+AGG | - | chr6_2:53155853-53155872 | None:intergenic | 30.0% |
| !!! | TCGTTTTATTTTTGTTGACC+TGG | + | chr6_2:53155865-53155884 | Msa0919860:intron | 30.0% |
| !!! | TGAAGGGATTAGTTTTTATC+AGG | + | chr6_2:53156462-53156481 | Msa0919860:intron | 30.0% |
| !!! | GAAGGGATTAGTTTTTATCA+GGG | + | chr6_2:53156463-53156482 | Msa0919860:intron | 30.0% |
| !!! | AAGGGATTAGTTTTTATCAG+GGG | + | chr6_2:53156464-53156483 | Msa0919860:intron | 30.0% |
| GTATAATCTGTGATGTGAAA+AGG | + | chr6_2:53156654-53156673 | Msa0919860:intron | 30.0% | |
| TTCTTCATTGCAGAATGTAA+TGG | + | chr6_2:53156765-53156784 | Msa0919860:intron | 30.0% | |
| ATATGCATAAAGACAAAACC+AGG | - | chr6_2:53156880-53156899 | None:intergenic | 30.0% | |
| ATATGATGATTTAGTGAAGC+AGG | + | chr6_2:53156896-53156915 | Msa0919860:intron | 30.0% | |
| TATGATGATTTAGTGAAGCA+GGG | + | chr6_2:53156897-53156916 | Msa0919860:intron | 30.0% | |
| CCATTATCTACAAAATAGAC+AGG | - | chr6_2:53157074-53157093 | None:intergenic | 30.0% | |
| ! | CCTGTCTATTTTGTAGATAA+TGG | + | chr6_2:53157071-53157090 | Msa0919860:intron | 30.0% |
| !!! | GTTTTGAAATTGGAATCGAA+GGG | - | chr6_2:53157104-53157123 | None:intergenic | 30.0% |
| TGGCATTCAAATAAGTTTGT+AGG | - | chr6_2:53157207-53157226 | None:intergenic | 30.0% | |
| ! | TTTTGTTAAATGCCAGTTGT+CGG | + | chr6_2:53157284-53157303 | Msa0919860:intron | 30.0% |
| ATATTAGATTGTAAATCCGG+GGG | - | chr6_2:53157320-53157339 | None:intergenic | 30.0% | |
| ATTAGATTAGGTCAACATCT+AGG | - | chr6_2:53157467-53157486 | None:intergenic | 30.0% | |
| TTATCGGTAAACTTTCGTTA+AGG | + | chr6_2:53157653-53157672 | Msa0919860:intron | 30.0% | |
| ! | ATTGATGATAAACACGGATA+TGG | - | chr6_2:53157707-53157726 | None:intergenic | 30.0% |
| ATTTGTAGTAAGCAATAGCA+TGG | + | chr6_2:53157759-53157778 | Msa0919860:intron | 30.0% | |
| AACCGATTATAAACATGGTA+TGG | + | chr6_2:53157970-53157989 | Msa0919860:intron | 30.0% | |
| CTCTACAAACATTTATTGTG+AGG | - | chr6_2:53158004-53158023 | None:intergenic | 30.0% | |
| ACTTATCGCATTGAAATACT+AGG | - | chr6_2:53158059-53158078 | None:intergenic | 30.0% | |
| !!! | TCTTGTTTTTTTATCTTCGC+AGG | - | chr6_2:53158118-53158137 | None:intergenic | 30.0% |
| TTAGTAGTAAGGAATAGCAA+TGG | - | chr6_2:53158167-53158186 | None:intergenic | 30.0% | |
| ! | TTGCTATTCCTTACTACTAA+CGG | + | chr6_2:53158167-53158186 | Msa0919860:intron | 30.0% |
| TATATCTTCCGTTAGTAGTA+AGG | - | chr6_2:53158178-53158197 | None:intergenic | 30.0% | |
| ACGAAAACTGATGATAAACA+CGG | + | chr6_2:53158214-53158233 | Msa0919860:intron | 30.0% | |
| CATAAGATTGTGACAACAAT+CGG | + | chr6_2:53158286-53158305 | Msa0919860:intron | 30.0% | |
| GTGAAATGGCAATTAACAAA+GGG | - | chr6_2:53158416-53158435 | None:intergenic | 30.0% | |
| AGTGAAATGGCAATTAACAA+AGG | - | chr6_2:53158417-53158436 | None:intergenic | 30.0% | |
| ! | AAAAAACGGATCGGTAATTT+TGG | - | chr6_2:53158450-53158469 | None:intergenic | 30.0% |
| GGAGAAAAAAAAAAACGGAT+CGG | - | chr6_2:53158459-53158478 | None:intergenic | 30.0% | |
| ! | TTCATTCCTATTTCTTTAGC+AGG | + | chr6_2:53158718-53158737 | Msa0919860:intron | 30.0% |
| ! | TCATTCCTATTTCTTTAGCA+GGG | + | chr6_2:53158719-53158738 | Msa0919860:intron | 30.0% |
| TATATCCCTGCTAAAGAAAT+AGG | - | chr6_2:53158727-53158746 | None:intergenic | 30.0% | |
| CATACAATGGCAGAAATAAA+AGG | - | chr6_2:53158833-53158852 | None:intergenic | 30.0% | |
| CCACTTAGCACATAAATAAT+AGG | - | chr6_2:53158926-53158945 | None:intergenic | 30.0% | |
| CCTATTATTTATGTGCTAAG+TGG | + | chr6_2:53158923-53158942 | Msa0919860:intron | 30.0% | |
| AATTCTTTCAATGAAAGGGA+TGG | - | chr6_2:53158979-53158998 | None:intergenic | 30.0% | |
| GGGAAATTCTTTCAATGAAA+GGG | - | chr6_2:53158983-53159002 | None:intergenic | 30.0% | |
| AGGGAAATTCTTTCAATGAA+AGG | - | chr6_2:53158984-53159003 | None:intergenic | 30.0% | |
| ATGATTGTCCCTTGTAAATA+TGG | + | chr6_2:53159020-53159039 | Msa0919860:intron | 30.0% | |
| GTCATAAGCCATATTTACAA+GGG | - | chr6_2:53159031-53159050 | None:intergenic | 30.0% | |
| TGAATGTGTTTGTACTTCAT+AGG | - | chr6_2:53159053-53159072 | None:intergenic | 30.0% | |
| ! | ATTATACAACCATTTTCCCT+TGG | - | chr6_2:53159236-53159255 | None:intergenic | 30.0% |
| AAAATAGCAGTGAATCAACT+CGG | - | chr6_2:53159337-53159356 | None:intergenic | 30.0% | |
| TGTTGTTAGCATTTCTTACT+AGG | - | chr6_2:53159360-53159379 | None:intergenic | 30.0% | |
| !!! | TTTGACACTATTTTTGGTGT+TGG | - | chr6_2:53159403-53159422 | None:intergenic | 30.0% |
| CCAAAAATAGTGTCAAATAG+CGG | + | chr6_2:53159406-53159425 | Msa0919860:intron | 30.0% | |
| TTCATCTAGTGCTGTAATTA+GGG | - | chr6_2:53159461-53159480 | None:intergenic | 30.0% | |
| TTTCATCTAGTGCTGTAATT+AGG | - | chr6_2:53159462-53159481 | None:intergenic | 30.0% | |
| TTGAACGTAATTACATGTGT+CGG | + | chr6_2:53159815-53159834 | Msa0919860:intron | 30.0% | |
| ! | GTTATTTCCTTCTACAACAA+AGG | - | chr6_2:53159930-53159949 | None:intergenic | 30.0% |
| ! | TATTGGTTAATTGAGCTTTC+GGG | - | chr6_2:53160030-53160049 | None:intergenic | 30.0% |
| ACAATTCTGATAGAGAACAT+AGG | + | chr6_2:53160325-53160344 | Msa0919860:intron | 30.0% | |
| TAATATGAGATGATGTAGGA+GGG | - | chr6_2:53160609-53160628 | None:intergenic | 30.0% | |
| TTAATATGAGATGATGTAGG+AGG | - | chr6_2:53160610-53160629 | None:intergenic | 30.0% | |
| GAAGAATTGAGAACTGATAT+TGG | + | chr6_2:53160646-53160665 | Msa0919860:CDS | 30.0% | |
| GAAAGAAGCAAAGTTAAAAC+CGG | - | chr6_2:53160698-53160717 | None:intergenic | 30.0% | |
| !!! | GGTTTTAACTTTGCTTCTTT+CGG | + | chr6_2:53160697-53160716 | Msa0919860:CDS | 30.0% |
| ! | GTTTGAAATTTGAGTGAATG+TGG | + | chr6_2:53161006-53161025 | Msa0919860:three_prime_UTR | 30.0% |
| !!! | GCTTTTTTCTTTCGCTTCAA+TGG | + | chr6_2:53154517-53154536 | Msa0919860:five_prime_UTR | 35.0% |
| !!! | GAAAGAGAGATTTTTGGTTC+TGG | + | chr6_2:53154794-53154813 | Msa0919860:CDS | 35.0% |
| TTTCCAACCTGAAAAATCTC+CGG | - | chr6_2:53155029-53155048 | None:intergenic | 35.0% | |
| !!! | GATTTTTCAGGTTGGAAAAG+TGG | + | chr6_2:53155031-53155050 | Msa0919860:CDS | 35.0% |
| !!! | GCTATTTTTAGCCTTTGATC+TGG | + | chr6_2:53155174-53155193 | Msa0919860:intron | 35.0% |
| TGAAAGGGAATCTAAGCTAA+GGG | - | chr6_2:53155368-53155387 | None:intergenic | 35.0% | |
| ! | TTTGCTGTCATAGTAATGTG+AGG | + | chr6_2:53155427-53155446 | Msa0919860:intron | 35.0% |
| ! | GTTTGGAATCGGAAATTGTT+AGG | + | chr6_2:53155594-53155613 | Msa0919860:intron | 35.0% |
| TTATTGCCTAGGGATGTATT+GGG | - | chr6_2:53155980-53155999 | None:intergenic | 35.0% | |
| ATTATTGCCTAGGGATGTAT+TGG | - | chr6_2:53155981-53156000 | None:intergenic | 35.0% | |
| GTTTCACGAATTATTGCCTA+GGG | - | chr6_2:53155990-53156009 | None:intergenic | 35.0% | |
| AATATCATTTACCCTCGTAG+AGG | - | chr6_2:53156245-53156264 | None:intergenic | 35.0% | |
| TCTCAAATTATTAGCGGTGA+CGG | - | chr6_2:53156341-53156360 | None:intergenic | 35.0% | |
| TGTCATGTCTAGTGTTTCAT+AGG | + | chr6_2:53156560-53156579 | Msa0919860:intron | 35.0% | |
| ! | ATGAAGACGTTTCAAGTCAT+CGG | + | chr6_2:53156831-53156850 | Msa0919860:intron | 35.0% |
| !!! | CGTTTTGAAATTGGAATCGA+AGG | - | chr6_2:53157105-53157124 | None:intergenic | 35.0% |
| !!! | AAGCACATGCGTTTTGAAAT+TGG | - | chr6_2:53157114-53157133 | None:intergenic | 35.0% |
| CATGTGCTTACTGTAAATTC+TGG | + | chr6_2:53157125-53157144 | Msa0919860:CDS | 35.0% | |
| CATAATTCAGTATTTGTCGG+CGG | - | chr6_2:53157944-53157963 | None:intergenic | 35.0% | |
| !! | TAGAGAAATAGCATTGACAC+AGG | + | chr6_2:53158019-53158038 | Msa0919860:intron | 35.0% |
| AACTGATGATAAACACGGAT+AGG | + | chr6_2:53158219-53158238 | Msa0919860:intron | 35.0% | |
| ACTGATGATAAACACGGATA+GGG | + | chr6_2:53158220-53158239 | Msa0919860:intron | 35.0% | |
| ATCTCATGCTTCATATCCAA+TGG | - | chr6_2:53158314-53158333 | None:intergenic | 35.0% | |
| TTGGATATGAAGCATGAGAT+TGG | + | chr6_2:53158314-53158333 | Msa0919860:intron | 35.0% | |
| ATGAAGCATGAGATTGGAAT+TGG | + | chr6_2:53158320-53158339 | Msa0919860:intron | 35.0% | |
| ! | ATTTTCCTTTGGCATGTTCT+AGG | + | chr6_2:53158559-53158578 | Msa0919860:intron | 35.0% |
| ATTTAACACCAATGCATGTG+TGG | + | chr6_2:53158796-53158815 | Msa0919860:intron | 35.0% | |
| GGTCATAAGCCATATTTACA+AGG | - | chr6_2:53159032-53159051 | None:intergenic | 35.0% | |
| ACATCTTCGATCTTAAGTGT+CGG | + | chr6_2:53159174-53159193 | Msa0919860:intron | 35.0% | |
| GCTACATTGTATTGTACTTG+TGG | + | chr6_2:53159198-53159217 | Msa0919860:intron | 35.0% | |
| ! | CCGCTATTTGACACTATTTT+TGG | - | chr6_2:53159409-53159428 | None:intergenic | 35.0% |
| TCATCTAGTGCTGTAATTAG+GGG | - | chr6_2:53159460-53159479 | None:intergenic | 35.0% | |
| !! | TGTCACCCCTTTTTATTTGA+TGG | - | chr6_2:53159485-53159504 | None:intergenic | 35.0% |
| ! | TTTGAGATTCTTTCCTTGAG+CGG | + | chr6_2:53159532-53159551 | Msa0919860:CDS | 35.0% |
| TTTGTCAATCCATTCTCAGT+TGG | - | chr6_2:53159568-53159587 | None:intergenic | 35.0% | |
| GTTGTAGAAGGAAATAACAC+TGG | + | chr6_2:53159932-53159951 | Msa0919860:intron | 35.0% | |
| TGGCCATGAAGCAATTATAT+TGG | - | chr6_2:53160047-53160066 | None:intergenic | 35.0% | |
| ! | ATTTTGCTGAAATAAGCGCT+CGG | + | chr6_2:53160113-53160132 | Msa0919860:intron | 35.0% |
| !! | ATATGCTTGTTATCCCGAAT+TGG | - | chr6_2:53160156-53160175 | None:intergenic | 35.0% |
| TGATGCGTAAAACAATGAGA+GGG | - | chr6_2:53160511-53160530 | None:intergenic | 35.0% | |
| AATATGAGATGATGTAGGAG+GGG | - | chr6_2:53160608-53160627 | None:intergenic | 35.0% | |
| GAATTGAGAACTGATATTGG+TGG | + | chr6_2:53160649-53160668 | Msa0919860:CDS | 35.0% | |
| TGGTTGTAGCAAGTAGATTT+AGG | + | chr6_2:53160942-53160961 | Msa0919860:three_prime_UTR | 35.0% | |
| ATGGTTTATGGTTGTGAAAG+TGG | + | chr6_2:53161066-53161085 | Msa0919860:three_prime_UTR | 35.0% | |
| GCATGCTGTTAATGTTAACC+AGG | + | chr6_2:53154817-53154836 | Msa0919860:CDS | 40.0% | |
| ! | TTTTGAGCCAAATTGAAGCC+AGG | - | chr6_2:53154848-53154867 | None:intergenic | 40.0% |
| CTTCCAGATTCACTCTTTCT+AGG | - | chr6_2:53154959-53154978 | None:intergenic | 40.0% | |
| !!! | TTTTCAGGTTGGAAAAGTGG+TGG | + | chr6_2:53155034-53155053 | Msa0919860:CDS | 40.0% |
| TGGTTTAGAAGTGGTATGTG+TGG | + | chr6_2:53155341-53155360 | Msa0919860:intron | 40.0% | |
| CTGAAAGGGAATCTAAGCTA+AGG | - | chr6_2:53155369-53155388 | None:intergenic | 40.0% | |
| AAATTGAAGATGTGGGGTGT+TGG | + | chr6_2:53155394-53155413 | Msa0919860:intron | 40.0% | |
| GTATAGTAATGTGAGGTCCA+TGG | + | chr6_2:53155497-53155516 | Msa0919860:intron | 40.0% | |
| ! | TGCTTGATTGGGTTTGGAAT+CGG | + | chr6_2:53155583-53155602 | Msa0919860:intron | 40.0% |
| TGATCGTCTTCCTAAAATCC+TGG | + | chr6_2:53155678-53155697 | Msa0919860:intron | 40.0% | |
| GATCGTCTTCCTAAAATCCT+GGG | + | chr6_2:53155679-53155698 | Msa0919860:intron | 40.0% | |
| TTCCTAAAATCCTGGGTTTG+CGG | + | chr6_2:53155686-53155705 | Msa0919860:intron | 40.0% | |
| GGTTTCACGAATTATTGCCT+AGG | - | chr6_2:53155991-53156010 | None:intergenic | 40.0% | |
| AGGATGTCAGTATCGTGAAT+CGG | - | chr6_2:53156126-53156145 | None:intergenic | 40.0% | |
| ! | GATCTCGATTTTGTCTACCT+TGG | + | chr6_2:53156163-53156182 | Msa0919860:intron | 40.0% |
| TCGGAAATCGAGCTAATTGA+AGG | + | chr6_2:53156272-53156291 | Msa0919860:intron | 40.0% | |
| CGGAAATCGAGCTAATTGAA+GGG | + | chr6_2:53156273-53156292 | Msa0919860:intron | 40.0% | |
| TGTCTGTGCTTCATAGTTGA+AGG | + | chr6_2:53156445-53156464 | Msa0919860:intron | 40.0% | |
| GTCTGTGCTTCATAGTTGAA+GGG | + | chr6_2:53156446-53156465 | Msa0919860:intron | 40.0% | |
| ATAGGCAATAATTGTCCTGC+AGG | + | chr6_2:53156578-53156597 | Msa0919860:intron | 40.0% | |
| ! | TGTCCTGCAGGATATTGATT+TGG | + | chr6_2:53156590-53156609 | Msa0919860:intron | 40.0% |
| AGTCCAAATCAATATCCTGC+AGG | - | chr6_2:53156596-53156615 | None:intergenic | 40.0% | |
| CTGTGATGTGAAAAGGATGA+TGG | + | chr6_2:53156661-53156680 | Msa0919860:intron | 40.0% | |
| ! | GCTTACTGTAAATTCTGGAG+AGG | + | chr6_2:53157130-53157149 | Msa0919860:CDS | 40.0% |
| TATGTGCTGCCAGAAAAAAG+TGG | + | chr6_2:53157379-53157398 | Msa0919860:intron | 40.0% | |
| !!! | ATTGTCGGACCACTTTTTTC+TGG | - | chr6_2:53157391-53157410 | None:intergenic | 40.0% |
| ! | AAGTGGTCCGACAATTTTTG+TGG | + | chr6_2:53157396-53157415 | Msa0919860:intron | 40.0% |
| CAATGGCAATTAACAGAGTG+TGG | + | chr6_2:53157433-53157452 | Msa0919860:intron | 40.0% | |
| ATTAGGTCAACATCTAGGTC+TGG | - | chr6_2:53157462-53157481 | None:intergenic | 40.0% | |
| CTGAAGCATGAGATTGGAAT+TGG | - | chr6_2:53157607-53157626 | None:intergenic | 40.0% | |
| ! | TCGTATCTGAAGCATGAGAT+TGG | - | chr6_2:53157613-53157632 | None:intergenic | 40.0% |
| !! | GAAGAGAATAGCATTGACAC+AGG | - | chr6_2:53157864-53157883 | None:intergenic | 40.0% |
| TAGTAAGGAATAGCAATGGC+AGG | - | chr6_2:53158163-53158182 | None:intergenic | 40.0% | |
| ATGGCAATTAACAAAGGGCA+TGG | - | chr6_2:53158411-53158430 | None:intergenic | 40.0% | |
| ATATCTATTCTGTCTGCGAC+TGG | + | chr6_2:53158629-53158648 | Msa0919860:CDS | 40.0% | |
| CGTATAAACCACACATGCAT+TGG | - | chr6_2:53158807-53158826 | None:intergenic | 40.0% | |
| TTGAATGTAACCACATGTGC+CGG | + | chr6_2:53159108-53159127 | Msa0919860:intron | 40.0% | |
| GTCTAACATTGGTATGACAC+CGG | - | chr6_2:53159130-53159149 | None:intergenic | 40.0% | |
| CACATGTCTGTGTCTAACAT+TGG | - | chr6_2:53159141-53159160 | None:intergenic | 40.0% | |
| TGTTAGACACAGACATGTGT+TGG | + | chr6_2:53159142-53159161 | Msa0919860:intron | 40.0% | |
| CATCTTCGATCTTAAGTGTC+GGG | + | chr6_2:53159175-53159194 | Msa0919860:intron | 40.0% | |
| ! | ATCTTCGATCTTAAGTGTCG+GGG | + | chr6_2:53159176-53159195 | Msa0919860:intron | 40.0% |
| GCAACAATTCCAAGGGAAAA+TGG | + | chr6_2:53159224-53159243 | Msa0919860:intron | 40.0% | |
| GTGAAGTTAGAGCGAGTTAA+TGG | - | chr6_2:53159313-53159332 | None:intergenic | 40.0% | |
| GCTGTAATTAGGGGGAAAAA+TGG | - | chr6_2:53159451-53159470 | None:intergenic | 40.0% | |
| CATCTAGTGCTGTAATTAGG+GGG | - | chr6_2:53159459-53159478 | None:intergenic | 40.0% | |
| TCATTTGTGCCAACTGAGAA+TGG | + | chr6_2:53159556-53159575 | Msa0919860:CDS | 40.0% | |
| TGGTAGAATGAGTGTCTCAT+TGG | + | chr6_2:53159597-53159616 | Msa0919860:CDS | 40.0% | |
| ! | GTCCAAATGGTCGTGTTTTT+GGG | + | chr6_2:53159623-53159642 | Msa0919860:CDS | 40.0% |
| !! | TCCAAATGGTCGTGTTTTTG+GGG | + | chr6_2:53159624-53159643 | Msa0919860:CDS | 40.0% |
| ! | TTTTGCTGAAATAAGCGCTC+GGG | + | chr6_2:53160114-53160133 | Msa0919860:intron | 40.0% |
| CTGATGCGTAAAACAATGAG+AGG | - | chr6_2:53160512-53160531 | None:intergenic | 40.0% | |
| !! | CTCTCATTGTTTTACGCATC+AGG | + | chr6_2:53160510-53160529 | Msa0919860:intron | 40.0% |
| !! | TTGTTTTACGCATCAGGTTG+TGG | + | chr6_2:53160516-53160535 | Msa0919860:intron | 40.0% |
| !!! | TGCGAGTTTTTTTCCAGAGA+AGG | + | chr6_2:53160540-53160559 | Msa0919860:CDS | 40.0% |
| AATGAAGCCTATCATGTCAC+CGG | + | chr6_2:53160672-53160691 | Msa0919860:CDS | 40.0% | |
| AACTTTGCTTCTTTCGGCAA+TGG | + | chr6_2:53160703-53160722 | Msa0919860:CDS | 40.0% | |
| TGGAAACTCATCATCATCTG+CGG | + | chr6_2:53160735-53160754 | Msa0919860:CDS | 40.0% | |
| CATGAGCATCTTAATGGCTA+GGG | - | chr6_2:53160778-53160797 | None:intergenic | 40.0% | |
| GTCAAGCATGAGCATCTTAA+TGG | - | chr6_2:53160784-53160803 | None:intergenic | 40.0% | |
| ! | GGTTAAATGCAGCTCTGATA+TGG | + | chr6_2:53160922-53160941 | Msa0919860:three_prime_UTR | 40.0% |
| ! | TTGAATTTTGCTGGGTCCAC+TGG | + | chr6_2:53154872-53154891 | Msa0919860:CDS | 45.0% |
| TGTGGAGGTGAAGAAGAAGA+GGG | + | chr6_2:53154928-53154947 | Msa0919860:CDS | 45.0% | |
| AGGCCTAGAAAGAGTGAATC+TGG | + | chr6_2:53154953-53154972 | Msa0919860:CDS | 45.0% | |
| GAGTGAATCTGGAAGTAAGC+CGG | + | chr6_2:53154964-53154983 | Msa0919860:CDS | 45.0% | |
| GTTGTCACCGATGCCAATTT+CGG | + | chr6_2:53154988-53155007 | Msa0919860:CDS | 45.0% | |
| ATGGAAGCCGAAATTGGCAT+CGG | - | chr6_2:53154998-53155017 | None:intergenic | 45.0% | |
| AACGGAATGGAAGCCGAAAT+TGG | - | chr6_2:53155004-53155023 | None:intergenic | 45.0% | |
| AAAATCTCCGGTCAACGGAA+TGG | - | chr6_2:53155017-53155036 | None:intergenic | 45.0% | |
| CCTGAAAAATCTCCGGTCAA+CGG | - | chr6_2:53155022-53155041 | None:intergenic | 45.0% | |
| !!! | TGACCGGAGATTTTTCAGGT+TGG | + | chr6_2:53155023-53155042 | Msa0919860:CDS | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr6_2:53155461-53155480 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr6_2:53155462-53155481 | None:intergenic | 45.0% |
| ! | GATCGCGATTTTGTCTACCA+TGG | - | chr6_2:53155517-53155536 | None:intergenic | 45.0% |
| ATAGGTGGAATCGCACGTTT+CGG | + | chr6_2:53155648-53155667 | Msa0919860:CDS | 45.0% | |
| TCCTAAAATCCTGGGTTTGC+GGG | + | chr6_2:53155687-53155706 | Msa0919860:intron | 45.0% | |
| !! | AGTTTTTCAAAGCTGGGTCG+AGG | - | chr6_2:53155719-53155738 | None:intergenic | 45.0% |
| GTACGTTTCATTCATGTGCC+AGG | - | chr6_2:53155886-53155905 | None:intergenic | 45.0% | |
| AACCTTCCCAATACATCCCT+AGG | + | chr6_2:53155971-53155990 | Msa0919860:intron | 45.0% | |
| TGAATCGGAGGATCGTAACA+CGG | - | chr6_2:53156111-53156130 | None:intergenic | 45.0% | |
| ATGTCAGTATCGTGAATCGG+AGG | - | chr6_2:53156123-53156142 | None:intergenic | 45.0% | |
| ATCCTACCACGATCTTGTCT+AGG | + | chr6_2:53156141-53156160 | Msa0919860:intron | 45.0% | |
| ATCCTAGACAAGATCGTGGT+AGG | - | chr6_2:53156146-53156165 | None:intergenic | 45.0% | |
| ! | CGATTTTGTCTACCTTGGTG+AGG | + | chr6_2:53156168-53156187 | Msa0919860:intron | 45.0% |
| TTTGTCTACCTTGGTGAGGT+CGG | + | chr6_2:53156172-53156191 | Msa0919860:intron | 45.0% | |
| TGACACTCACACATCAACAC+CGG | - | chr6_2:53156540-53156559 | None:intergenic | 45.0% | |
| TCTGTGTCTAATGCATCACC+TGG | + | chr6_2:53156859-53156878 | Msa0919860:intron | 45.0% | |
| TGTTAAATGCCAGTTGTCGG+TGG | + | chr6_2:53157287-53157306 | Msa0919860:intron | 45.0% | |
| GTTAAATGCCAGTTGTCGGT+GGG | + | chr6_2:53157288-53157307 | Msa0919860:intron | 45.0% | |
| TTAAATGCCAGTTGTCGGTG+GGG | + | chr6_2:53157289-53157308 | Msa0919860:intron | 45.0% | |
| TGGCAGCACATACAAAGAAG+GGG | - | chr6_2:53157371-53157390 | None:intergenic | 45.0% | |
| CTGGCAGCACATACAAAGAA+GGG | - | chr6_2:53157372-53157391 | None:intergenic | 45.0% | |
| TCTGGCAGCACATACAAAGA+AGG | - | chr6_2:53157373-53157392 | None:intergenic | 45.0% | |
| TGGCAATTAACAGAGTGTGG+TGG | + | chr6_2:53157436-53157455 | Msa0919860:intron | 45.0% | |
| GGTTGGAGTATGATTGAGTG+AGG | - | chr6_2:53157535-53157554 | None:intergenic | 45.0% | |
| !! | AATTTGCTGAGCAGTGGCAA+GGG | - | chr6_2:53157569-53157588 | None:intergenic | 45.0% |
| !! | GAGAACAATTTGCTGAGCAG+TGG | - | chr6_2:53157575-53157594 | None:intergenic | 45.0% |
| ! | GCAATTAACAAAGGGCATGG+CGG | - | chr6_2:53158408-53158427 | None:intergenic | 45.0% |
| GACATCCTAGAACATGCCAA+AGG | - | chr6_2:53158567-53158586 | None:intergenic | 45.0% | |
| GAATGTAACACTTCGCCAGT+CGG | + | chr6_2:53158661-53158680 | Msa0919860:CDS | 45.0% | |
| ACAAACACATTCACCGACAC+AGG | + | chr6_2:53159060-53159079 | Msa0919860:intron | 45.0% | |
| TGTGGCATGCAACAATTCCA+AGG | + | chr6_2:53159216-53159235 | Msa0919860:intron | 45.0% | |
| GTGGCATGCAACAATTCCAA+GGG | + | chr6_2:53159217-53159236 | Msa0919860:intron | 45.0% | |
| GGATTGACAAAGAGCAGATC+TGG | + | chr6_2:53159577-53159596 | Msa0919860:CDS | 45.0% | |
| AGAATGAGTGTCTCATTGGC+AGG | + | chr6_2:53159601-53159620 | Msa0919860:CDS | 45.0% | |
| ! | GGTCCAAATGGTCGTGTTTT+TGG | + | chr6_2:53159622-53159641 | Msa0919860:CDS | 45.0% |
| !!! | CCAAATGGTCGTGTTTTTGG+GGG | + | chr6_2:53159625-53159644 | Msa0919860:CDS | 45.0% |
| !! | TGAACTATGAAGCACTGACG+TGG | + | chr6_2:53159736-53159755 | Msa0919860:intron | 45.0% |
| ! | GTTCAGATTGAAGGCGTGTT+CGG | - | chr6_2:53159855-53159874 | None:intergenic | 45.0% |
| GCAACGACAGTTCAGATTGA+AGG | - | chr6_2:53159864-53159883 | None:intergenic | 45.0% | |
| !! | ACACTGGTGCTGATTGATGA+TGG | + | chr6_2:53159948-53159967 | Msa0919860:intron | 45.0% |
| TGCTTCATGGCCACAAAACA+AGG | + | chr6_2:53160054-53160073 | Msa0919860:intron | 45.0% | |
| GCTTCATGGCCACAAAACAA+GGG | + | chr6_2:53160055-53160074 | Msa0919860:intron | 45.0% | |
| CTTCATGGCCACAAAACAAG+GGG | + | chr6_2:53160056-53160075 | Msa0919860:intron | 45.0% | |
| TTCATGGCCACAAAACAAGG+GGG | + | chr6_2:53160057-53160076 | Msa0919860:intron | 45.0% | |
| ATTGTCCCGAGGTTCCAATT+CGG | + | chr6_2:53160139-53160158 | Msa0919860:intron | 45.0% | |
| TTATCCCGAATTGGAACCTC+GGG | - | chr6_2:53160147-53160166 | None:intergenic | 45.0% | |
| GTTATCCCGAATTGGAACCT+CGG | - | chr6_2:53160148-53160167 | None:intergenic | 45.0% | |
| CTCTTTGGATTCTCCTTCTC+TGG | - | chr6_2:53160556-53160575 | None:intergenic | 45.0% | |
| CAGAGAAGGAGAATCCAAAG+AGG | + | chr6_2:53160554-53160573 | Msa0919860:CDS | 45.0% | |
| AGGAGAATCCAAAGAGGCAA+AGG | + | chr6_2:53160560-53160579 | Msa0919860:CDS | 45.0% | |
| GGAGAATCCAAAGAGGCAAA+GGG | + | chr6_2:53160561-53160580 | Msa0919860:CDS | 45.0% | |
| GAAGCAAAGTTAAAACCGGC+CGG | - | chr6_2:53160694-53160713 | None:intergenic | 45.0% | |
| ATGATGAGTTTCCAGAGCCT+TGG | - | chr6_2:53160729-53160748 | None:intergenic | 45.0% | |
| GCATGAGCATCTTAATGGCT+AGG | - | chr6_2:53160779-53160798 | None:intergenic | 45.0% | |
| !!! | AATATCATATATTTTAAAAA+GGG | - | chr6_2:53157347-53157366 | None:intergenic | 5.0% |
| !!! | AAATATCATATATTTTAAAA+AGG | - | chr6_2:53157348-53157367 | None:intergenic | 5.0% |
| AGCCAAATTGAAGCCAGGTG+GGG | - | chr6_2:53154843-53154862 | None:intergenic | 50.0% | |
| GAGCCAAATTGAAGCCAGGT+GGG | - | chr6_2:53154844-53154863 | None:intergenic | 50.0% | |
| TGAGCCAAATTGAAGCCAGG+TGG | - | chr6_2:53154845-53154864 | None:intergenic | 50.0% | |
| GTGTGGAGGTGAAGAAGAAG+AGG | + | chr6_2:53154927-53154946 | Msa0919860:CDS | 50.0% | |
| GTGGAGGTGAAGAAGAAGAG+GGG | + | chr6_2:53154929-53154948 | Msa0919860:CDS | 50.0% | |
| ! | CCGTTGACCGGAGATTTTTC+AGG | + | chr6_2:53155019-53155038 | Msa0919860:CDS | 50.0% |
| !! | TCAGGTTGGAAAAGTGGTGG+TGG | + | chr6_2:53155037-53155056 | Msa0919860:CDS | 50.0% |
| !! | TGAAGATGTGGGGTGTTGGA+AGG | + | chr6_2:53155398-53155417 | Msa0919860:intron | 50.0% |
| !! | GAAGATGTGGGGTGTTGGAA+GGG | + | chr6_2:53155399-53155418 | Msa0919860:intron | 50.0% |
| !! | AAGATGTGGGGTGTTGGAAG+GGG | + | chr6_2:53155400-53155419 | Msa0919860:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr6_2:53155457-53155476 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr6_2:53155463-53155482 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr6_2:53155460-53155479 | Msa0919860:intron | 50.0% | |
| TACCCTGTGCGTGCTTGATT+GGG | + | chr6_2:53155572-53155591 | Msa0919860:intron | 50.0% | |
| AACCCAATCAAGCACGCACA+GGG | - | chr6_2:53155577-53155596 | None:intergenic | 50.0% | |
| AAACCCAATCAAGCACGCAC+AGG | - | chr6_2:53155578-53155597 | None:intergenic | 50.0% | |
| TGTGCGTGCTTGATTGGGTT+TGG | + | chr6_2:53155577-53155596 | Msa0919860:intron | 50.0% | |
| ! | ACCTATTCCACGCGTTTTCG+CGG | - | chr6_2:53155634-53155653 | None:intergenic | 50.0% |
| ! | ACCCGCAAACCCAGGATTTT+AGG | - | chr6_2:53155691-53155710 | None:intergenic | 50.0% |
| AAAATCCTGGGTTTGCGGGT+CGG | + | chr6_2:53155691-53155710 | Msa0919860:intron | 50.0% | |
| TGCCTAGGGATGTATTGGGA+AGG | - | chr6_2:53155976-53155995 | None:intergenic | 50.0% | |
| CGAGATCCTAGACAAGATCG+TGG | - | chr6_2:53156150-53156169 | None:intergenic | 50.0% | |
| TCTGAAAACCGACCTCACCA+AGG | - | chr6_2:53156183-53156202 | None:intergenic | 50.0% | |
| ACACGACACATGTCCGATAC+CGG | + | chr6_2:53156402-53156421 | Msa0919860:intron | 50.0% | |
| GCACAGACACTCCTCAGATT+AGG | - | chr6_2:53156434-53156453 | None:intergenic | 50.0% | |
| AGTGGCAAGGGAAAGGGAAA+GGG | - | chr6_2:53157557-53157576 | None:intergenic | 50.0% | |
| !! | CAATTTGCTGAGCAGTGGCA+AGG | - | chr6_2:53157570-53157589 | None:intergenic | 50.0% |
| ! | GTGACAACAATCGGCTCCAT+TGG | + | chr6_2:53158295-53158314 | Msa0919860:intron | 50.0% |
| TGGCGGTACTTCAACGTATG+AGG | + | chr6_2:53158691-53158710 | Msa0919860:CDS | 50.0% | |
| GTCTCATTGGCAGGTCCAAA+TGG | + | chr6_2:53159610-53159629 | Msa0919860:CDS | 50.0% | |
| CCCCCAAAAACACGACCATT+TGG | - | chr6_2:53159628-53159647 | None:intergenic | 50.0% | |
| !! | ATGAAGCACTGACGTGGACA+TGG | + | chr6_2:53159742-53159761 | Msa0919860:intron | 50.0% |
| !! | GGTGCTGATTGATGATGGCA+AGG | + | chr6_2:53159953-53159972 | Msa0919860:intron | 50.0% |
| TTGAGCTTTCGGGATGTGCT+CGG | - | chr6_2:53160020-53160039 | None:intergenic | 50.0% | |
| TCATGGCCACAAAACAAGGG+GGG | + | chr6_2:53160058-53160077 | Msa0919860:intron | 50.0% | |
| ! | GGGGGCATGGGTGTAATTTA+AGG | + | chr6_2:53160077-53160096 | Msa0919860:intron | 50.0% |
| TTGTCCCGAGGTTCCAATTC+GGG | + | chr6_2:53160140-53160159 | Msa0919860:intron | 50.0% | |
| TGATCGACCCTTTGCCTCTT+TGG | - | chr6_2:53160571-53160590 | None:intergenic | 50.0% | |
| GAGGCAAAGGGTCGATCATT+CGG | + | chr6_2:53160573-53160592 | Msa0919860:CDS | 50.0% | |
| AATGTTAACCAGGCCCCACC+TGG | + | chr6_2:53154827-53154846 | Msa0919860:CDS | 55.0% | |
| TGGGTCCACTGGAGAGTTAC+CGG | + | chr6_2:53154883-53154902 | Msa0919860:CDS | 55.0% | |
| AGGTGAAGAAGAAGAGGGGC+AGG | + | chr6_2:53154933-53154952 | Msa0919860:CDS | 55.0% | |
| !! | ATTGGCATCGGTGACAACGC+CGG | - | chr6_2:53154986-53155005 | None:intergenic | 55.0% |
| TCGGCTTCCATTCCGTTGAC+CGG | + | chr6_2:53155007-53155026 | Msa0919860:CDS | 55.0% | |
| !! | GGTTGGAAAAGTGGTGGTGG+TGG | + | chr6_2:53155040-53155059 | Msa0919860:CDS | 55.0% |
| !! | TGGAAAAGTGGTGGTGGTGG+AGG | + | chr6_2:53155043-53155062 | Msa0919860:CDS | 55.0% |
| !! | AAAAGTGGTGGTGGTGGAGG+TGG | + | chr6_2:53155046-53155065 | Msa0919860:CDS | 55.0% |
| CGACCCCACTTAGTGGGATA+AGG | + | chr6_2:53155455-53155474 | Msa0919860:intron | 55.0% | |
| GTACCCTGTGCGTGCTTGAT+TGG | + | chr6_2:53155571-53155590 | Msa0919860:intron | 55.0% | |
| CGGAAATTGTTAGGCGCAGC+CGG | + | chr6_2:53155603-53155622 | Msa0919860:intron | 55.0% | |
| GCGAAAACGCGTGGAATAGG+TGG | + | chr6_2:53155633-53155652 | Msa0919860:CDS | 55.0% | |
| CGGAGGATCGTAACACGGAT+CGG | - | chr6_2:53156106-53156125 | None:intergenic | 55.0% | |
| CACGAACACCAGACACGACA+CGG | + | chr6_2:53156304-53156323 | Msa0919860:intron | 55.0% | |
| GTCAATGTCCGTGTCGTGTC+TGG | - | chr6_2:53156315-53156334 | None:intergenic | 55.0% | |
| CACGACACATGTCCGATACC+GGG | + | chr6_2:53156403-53156422 | Msa0919860:intron | 55.0% | |
| GATTAGGCGTGTCCCGGTAT+CGG | - | chr6_2:53156418-53156437 | None:intergenic | 55.0% | |
| TCCTCAGATTAGGCGTGTCC+CGG | - | chr6_2:53156424-53156443 | None:intergenic | 55.0% | |
| CAAGGGAAAGGGAAAGGGGT+TGG | - | chr6_2:53157552-53157571 | None:intergenic | 55.0% | |
| GTGGCAAGGGAAAGGGAAAG+GGG | - | chr6_2:53157556-53157575 | None:intergenic | 55.0% | |
| CAGTGGCAAGGGAAAGGGAA+AGG | - | chr6_2:53157558-53157577 | None:intergenic | 55.0% | |
| CTGAGCAGTGGCAAGGGAAA+GGG | - | chr6_2:53157563-53157582 | None:intergenic | 55.0% | |
| AGAAACCGGCGGCAAGAGAA+AGG | + | chr6_2:53158377-53158396 | Msa0919860:intron | 55.0% | |
| GAAACCGGCGGCAAGAGAAA+GGG | + | chr6_2:53158378-53158397 | Msa0919860:intron | 55.0% | |
| TGGTATGACACCGGCACATG+TGG | - | chr6_2:53159121-53159140 | None:intergenic | 55.0% | |
| TGGCACAAATGAGCCGCTCA+AGG | - | chr6_2:53159548-53159567 | None:intergenic | 55.0% | |
| !!! | TCGTGTTTTTGGGGGTGCAC+TGG | + | chr6_2:53159633-53159652 | Msa0919860:CDS | 55.0% |
| CACTGACGTGGACATGGACA+CGG | + | chr6_2:53159748-53159767 | Msa0919860:intron | 55.0% | |
| ACTGACGTGGACATGGACAC+GGG | + | chr6_2:53159749-53159768 | Msa0919860:intron | 55.0% | |
| TGAGCTTTCGGGATGTGCTC+GGG | - | chr6_2:53160019-53160038 | None:intergenic | 55.0% | |
| CATGGCCACAAAACAAGGGG+GGG | + | chr6_2:53160059-53160078 | Msa0919860:intron | 55.0% | |
| ! | CACAAAACAAGGGGGGGCAT+GGG | + | chr6_2:53160065-53160084 | Msa0919860:intron | 55.0% |
| GATGATGTAGGAGGGGCAGT+TGG | - | chr6_2:53160601-53160620 | None:intergenic | 55.0% | |
| AAGCCTATCATGTCACCGGC+CGG | + | chr6_2:53160676-53160695 | Msa0919860:CDS | 55.0% | |
| AAACCGGCCGGTGACATGAT+AGG | - | chr6_2:53160682-53160701 | None:intergenic | 55.0% | |
| GCTTCTTTCGGCAATGGCCA+AGG | + | chr6_2:53160709-53160728 | Msa0919860:CDS | 55.0% | |
| AATTGAAGCCAGGTGGGGCC+TGG | - | chr6_2:53154838-53154857 | None:intergenic | 60.0% | |
| GGCCCCACCTGGCTTCAATT+TGG | + | chr6_2:53154838-53154857 | Msa0919860:CDS | 60.0% | |
| !! | CACTGGAGAGTTACCGGCTC+CGG | + | chr6_2:53154889-53154908 | Msa0919860:CDS | 60.0% |
| ATCCCACTAAGTGGGGTCGG+CGG | - | chr6_2:53155454-53155473 | None:intergenic | 60.0% | |
| ! | ACGCGTTTTCGCGGCGATTC+CGG | - | chr6_2:53155625-53155644 | None:intergenic | 60.0% |
| GCCGCGAAAACGCGTGGAAT+AGG | + | chr6_2:53155630-53155649 | Msa0919860:CDS | 60.0% | |
| GGTGGAATCGCACGTTTCGG+CGG | + | chr6_2:53155651-53155670 | Msa0919860:CDS | 60.0% | |
| ACCGGGACACGCCTAATCTG+AGG | + | chr6_2:53156420-53156439 | Msa0919860:intron | 60.0% | |
| ATGCCAGTTGTCGGTGGGGT+TGG | + | chr6_2:53157293-53157312 | Msa0919860:intron | 60.0% | |
| GCTGAGCAGTGGCAAGGGAA+AGG | - | chr6_2:53157564-53157583 | None:intergenic | 60.0% | |
| CTTCGCCAGTCGGATGCTTG+TGG | + | chr6_2:53158671-53158690 | Msa0919860:CDS | 60.0% | |
| TACCGCCACAAGCATCCGAC+TGG | - | chr6_2:53158679-53158698 | None:intergenic | 60.0% | |
| !! | GTTTTTGGGGGTGCACTGGC+TGG | + | chr6_2:53159637-53159656 | Msa0919860:CDS | 60.0% |
| !! | GCTGGTTTGCTGGTAGCTGC+TGG | + | chr6_2:53159655-53159674 | Msa0919860:CDS | 60.0% |
| !! | GGTAGCTGCTGGTTCTGTGC+AGG | + | chr6_2:53159666-53159685 | Msa0919860:CDS | 60.0% |
| !!! | CCATGCCCCCCCTTGTTTTG+TGG | - | chr6_2:53160067-53160086 | None:intergenic | 60.0% |
| CCACAAAACAAGGGGGGGCA+TGG | + | chr6_2:53160064-53160083 | Msa0919860:intron | 60.0% | |
| TTCGGCAATGGCCAAGGCTC+TGG | + | chr6_2:53160715-53160734 | Msa0919860:CDS | 60.0% | |
| CGGAGCCGGTAACTCTCCAG+TGG | - | chr6_2:53154891-53154910 | None:intergenic | 65.0% | |
| !! | AGAGTTACCGGCTCCGGTGC+CGG | + | chr6_2:53154895-53154914 | Msa0919860:CDS | 65.0% |
| !! | AGTGGTGGTGGTGGAGGTGG+AGG | + | chr6_2:53155049-53155068 | Msa0919860:CDS | 65.0% |
| GTCCGCCGACCCCACTTAGT+GGG | + | chr6_2:53155449-53155468 | Msa0919860:intron | 65.0% | |
| GGAATCGCCGCGAAAACGCG+TGG | + | chr6_2:53155624-53155643 | Msa0919860:CDS | 65.0% | |
| AGGATCCGACCCGCAAACCC+AGG | - | chr6_2:53155699-53155718 | None:intergenic | 65.0% | |
| GGACCAACCCCACCGACAAC+TGG | - | chr6_2:53157299-53157318 | None:intergenic | 65.0% | |
| CGCCAGTCGGATGCTTGTGG+CGG | + | chr6_2:53158674-53158693 | Msa0919860:CDS | 65.0% | |
| !! | GGGTGCACTGGCTGGTTTGC+TGG | + | chr6_2:53159645-53159664 | Msa0919860:CDS | 65.0% |
| GCGCTCGGGAAATTGTCCCG+AGG | + | chr6_2:53160128-53160147 | Msa0919860:intron | 65.0% | |
| ACCTCCACACCACCGCCAGC+CGG | - | chr6_2:53154917-53154936 | None:intergenic | 70.0% | |
| GGTCCGCCGACCCCACTTAG+TGG | + | chr6_2:53155448-53155467 | Msa0919860:intron | 70.0% | |
| !! | TGTCGGTGGGGTTGGTCCCC+CGG | + | chr6_2:53157301-53157320 | Msa0919860:intron | 70.0% |
| !! | TTACCGGCTCCGGTGCCGGC+TGG | + | chr6_2:53154899-53154918 | Msa0919860:CDS | 75.0% |
| ACACCACCGCCAGCCGGCAC+CGG | - | chr6_2:53154911-53154930 | None:intergenic | 75.0% | |
| !!! | GGTGCCGGCTGGCGGTGGTG+TGG | + | chr6_2:53154910-53154929 | Msa0919860:CDS | 80.0% |
| ! | GCCGGCTGGCGGTGGTGTGG+AGG | + | chr6_2:53154913-53154932 | Msa0919860:CDS | 80.0% |
| !! | CCGCCAGCCGGCACCGGAGC+CGG | - | chr6_2:53154905-53154924 | None:intergenic | 85.0% |
| !!! | CCGGCTCCGGTGCCGGCTGG+CGG | + | chr6_2:53154902-53154921 | Msa0919860:CDS | 85.0% |
| !!! | GCTCCGGTGCCGGCTGGCGG+TGG | + | chr6_2:53154905-53154924 | Msa0919860:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 53154403 | 53161102 | 53154403 | ID=Msa0919860;Name=Msa0919860 |
| chr6_2 | mRNA | 53154403 | 53161102 | 53154403 | ID=Msa0919860-mRNA-1;Parent=Msa0919860;Name=Msa0919860-mRNA-1;_AED=0.19;_eAED=0.19;_QI=385|0.6|0.83|0.83|1|1|6|328|338 |
| chr6_2 | exon | 53154403 | 53155145 | 53154403 | ID=Msa0919860-mRNA-1:exon:7939;Parent=Msa0919860-mRNA-1 |
| chr6_2 | exon | 53155616 | 53155672 | 53155616 | ID=Msa0919860-mRNA-1:exon:7940;Parent=Msa0919860-mRNA-1 |
| chr6_2 | exon | 53157087 | 53157151 | 53157087 | ID=Msa0919860-mRNA-1:exon:7941;Parent=Msa0919860-mRNA-1 |
| chr6_2 | exon | 53158581 | 53158712 | 53158581 | ID=Msa0919860-mRNA-1:exon:7942;Parent=Msa0919860-mRNA-1 |
| chr6_2 | exon | 53159526 | 53159687 | 53159526 | ID=Msa0919860-mRNA-1:exon:7943;Parent=Msa0919860-mRNA-1 |
| chr6_2 | exon | 53160532 | 53161102 | 53160532 | ID=Msa0919860-mRNA-1:exon:7944;Parent=Msa0919860-mRNA-1 |
| chr6_2 | five_prime_UTR | 53154403 | 53154787 | 53154403 | ID=Msa0919860-mRNA-1:five_prime_utr;Parent=Msa0919860-mRNA-1 |
| chr6_2 | CDS | 53154788 | 53155145 | 53154788 | ID=Msa0919860-mRNA-1:cds;Parent=Msa0919860-mRNA-1 |
| chr6_2 | CDS | 53155616 | 53155672 | 53155616 | ID=Msa0919860-mRNA-1:cds;Parent=Msa0919860-mRNA-1 |
| chr6_2 | CDS | 53157087 | 53157151 | 53157087 | ID=Msa0919860-mRNA-1:cds;Parent=Msa0919860-mRNA-1 |
| chr6_2 | CDS | 53158581 | 53158712 | 53158581 | ID=Msa0919860-mRNA-1:cds;Parent=Msa0919860-mRNA-1 |
| chr6_2 | CDS | 53159526 | 53159687 | 53159526 | ID=Msa0919860-mRNA-1:cds;Parent=Msa0919860-mRNA-1 |
| chr6_2 | CDS | 53160532 | 53160774 | 53160532 | ID=Msa0919860-mRNA-1:cds;Parent=Msa0919860-mRNA-1 |
| chr6_2 | three_prime_UTR | 53160775 | 53161102 | 53160775 | ID=Msa0919860-mRNA-1:three_prime_utr;Parent=Msa0919860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
