Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120740 | XP_024625246.1 | 89.700 | 233 | 4 | 1 | 37 | 269 | 1 | 213 | 5.67e-144 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120740 | A0A396H380 | 89.700 | 233 | 4 | 1 | 37 | 269 | 1 | 213 | 2.71e-144 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015390 | Msa1120740 | 0.825702 | 4.059637e-54 | -8.615850e-47 |
| Msa0090570 | Msa1120740 | 0.811072 | 8.404125e-51 | -8.615850e-47 |
| Msa0099210 | Msa1120740 | 0.824185 | 9.257699e-54 | -8.615850e-47 |
| Msa0117710 | Msa1120740 | 0.802685 | 4.988861e-49 | -8.615850e-47 |
| Msa0613110 | Msa1120740 | 0.827581 | 1.445696e-54 | -8.615850e-47 |
| Msa0613340 | Msa1120740 | 0.863042 | 3.300332e-64 | -8.615850e-47 |
| Msa0615010 | Msa1120740 | 0.808570 | 2.902762e-50 | -8.615850e-47 |
| Msa0645300 | Msa1120740 | 0.802999 | 4.298126e-49 | -8.615850e-47 |
| Msa0708310 | Msa1120740 | 0.806503 | 7.968800e-50 | -8.615850e-47 |
| Msa0748970 | Msa1120740 | 0.826652 | 2.411580e-54 | -8.615850e-47 |
| Msa0768370 | Msa1120740 | 0.806282 | 8.870868e-50 | -8.615850e-47 |
| Msa0773180 | Msa1120740 | 0.802252 | 6.128024e-49 | -8.615850e-47 |
| Msa0787120 | Msa1120740 | 0.824027 | 1.008206e-53 | -8.615850e-47 |
| Msa0800210 | Msa1120740 | 0.816083 | 6.639133e-52 | -8.615850e-47 |
| Msa0824590 | Msa1120740 | 0.806401 | 8.376022e-50 | -8.615850e-47 |
| Msa0127800 | Msa1120740 | 0.807461 | 4.997472e-50 | -8.615850e-47 |
| Msa0405130 | Msa1120740 | 0.817305 | 3.533356e-52 | -8.615850e-47 |
| Msa0411390 | Msa1120740 | 0.832843 | 7.499903e-56 | -8.615850e-47 |
| Msa0423860 | Msa1120740 | 0.806550 | 7.788600e-50 | -8.615850e-47 |
| Msa0426930 | Msa1120740 | 0.800483 | 1.410944e-48 | -8.615850e-47 |
| Msa0434200 | Msa1120740 | 0.802335 | 5.892059e-49 | -8.615850e-47 |
| Msa0989620 | Msa1120740 | 0.816996 | 4.145262e-52 | -8.615850e-47 |
| Msa0999680 | Msa1120740 | 0.807688 | 4.472427e-50 | -8.615850e-47 |
| Msa1065010 | Msa1120740 | 0.815628 | 8.388227e-52 | -8.615850e-47 |
| Msa1075650 | Msa1120740 | 0.803164 | 3.972442e-49 | -8.615850e-47 |
| Msa1105650 | Msa1120740 | 0.800082 | 1.703193e-48 | -8.615850e-47 |
| Msa0251640 | Msa1120740 | 0.817660 | 2.938790e-52 | -8.615850e-47 |
| Msa0267790 | Msa1120740 | 0.804974 | 1.669746e-49 | -8.615850e-47 |
| Msa0275020 | Msa1120740 | 0.825068 | 5.734181e-54 | -8.615850e-47 |
| Msa0288120 | Msa1120740 | 0.807528 | 4.837970e-50 | -8.615850e-47 |
| Msa0307540 | Msa1120740 | 0.815533 | 8.804279e-52 | -8.615850e-47 |
| Msa0315940 | Msa1120740 | 0.822819 | 1.931953e-53 | -8.615850e-47 |
| Msa0342750 | Msa1120740 | 0.825713 | 4.034814e-54 | -8.615850e-47 |
| Msa1119940 | Msa1120740 | 0.807456 | 5.010463e-50 | -8.615850e-47 |
| Msa1120740 | Msa1121480 | 0.830586 | 2.702284e-55 | -8.615850e-47 |
| Msa1120740 | Msa1121490 | 0.837107 | 6.317758e-57 | -8.615850e-47 |
| Msa1120740 | Msa1121700 | 0.831281 | 1.824134e-55 | -8.615850e-47 |
| Msa1120740 | Msa1137570 | 0.816671 | 4.903562e-52 | -8.615850e-47 |
| Msa1120740 | Msa1246360 | 0.806329 | 8.673893e-50 | -8.615850e-47 |
| Msa1120740 | Msa1248310 | 0.829190 | 5.911637e-55 | -8.615850e-47 |
| Msa1120740 | Msa1248370 | 0.826241 | 3.022981e-54 | -8.615850e-47 |
| Msa1120740 | Msa1285550 | 0.825457 | 4.640017e-54 | -8.615850e-47 |
| Msa1120740 | Msa1286800 | 0.809326 | 1.999376e-50 | -8.615850e-47 |
| Msa1120740 | Msa1353470 | 0.823444 | 1.380933e-53 | -8.615850e-47 |
| Msa1120740 | Msa1410680 | 0.802662 | 5.042932e-49 | -8.615850e-47 |
| Msa1120740 | Msa1420820 | 0.823867 | 1.099177e-53 | -8.615850e-47 |
| Msa1120740 | Msa1448640 | 0.811856 | 5.678653e-51 | -8.615850e-47 |
| Msa1120740 | Msa1458750 | 0.805514 | 1.286855e-49 | -8.615850e-47 |
| Msa1120740 | Msa1458770 | 0.806679 | 7.316218e-50 | -8.615850e-47 |
| Msa1120740 | Msa1462360 | 0.816638 | 4.987472e-52 | -8.615850e-47 |
| Msa0490140 | Msa1120740 | 0.803808 | 2.920968e-49 | -8.615850e-47 |
| Msa0493000 | Msa1120740 | 0.802995 | 4.304784e-49 | -8.615850e-47 |
| Msa0549890 | Msa1120740 | 0.820404 | 6.981632e-53 | -8.615850e-47 |
| Msa0585230 | Msa1120740 | 0.806596 | 7.616954e-50 | -8.615850e-47 |
| Msa0842710 | Msa1120740 | 0.822558 | 2.221994e-53 | -8.615850e-47 |
| Msa0853520 | Msa1120740 | 0.800662 | 1.297129e-48 | -8.615850e-47 |
| Msa0899430 | Msa1120740 | 0.806676 | 7.328853e-50 | -8.615850e-47 |
| Msa0899970 | Msa1120740 | 0.807545 | 4.796212e-50 | -8.615850e-47 |
| Msa0900910 | Msa1120740 | 0.803416 | 3.522465e-49 | -8.615850e-47 |
| Msa0901020 | Msa1120740 | 0.801412 | 9.115990e-49 | -8.615850e-47 |
| Msa0901070 | Msa1120740 | 0.816243 | 6.113358e-52 | -8.615850e-47 |
| Msa0907690 | Msa1120740 | 0.811040 | 8.541497e-51 | -8.615850e-47 |
| Msa0914270 | Msa1120740 | 0.827038 | 1.950686e-54 | -8.615850e-47 |
| Msa0925870 | Msa1120740 | 0.801602 | 8.334867e-49 | -8.615850e-47 |
| Msa0927380 | Msa1120740 | 0.813752 | 2.182884e-51 | -8.615850e-47 |
| Msa0965080 | Msa1120740 | 0.820387 | 7.044810e-53 | -8.615850e-47 |
| Msa0965290 | Msa1120740 | 0.812454 | 4.204559e-51 | -8.615850e-47 |
| Msa0967280 | Msa1120740 | 0.835268 | 1.852275e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120740 | MtrunA17_Chr7g0250781 | 89.700 | 233 | 4 | 1 | 37 | 269 | 1 | 213 | 5.22e-148 | 416 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1120740 | AT1G67060.1 | 74.892 | 231 | 37 | 2 | 39 | 269 | 5 | 214 | 2.15e-117 | 338 |
| Msa1120740 | AT1G67060.2 | 74.405 | 168 | 22 | 2 | 102 | 269 | 1 | 147 | 1.19e-78 | 238 |
| Msa1120740 | AT1G67060.3 | 74.405 | 168 | 22 | 2 | 102 | 269 | 1 | 147 | 1.19e-78 | 238 |
Find 50 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATCTTGGTTCATCATTT+TGG | 0.061517 | 7_3:+70376998 | Msa1120740:intron |
| ATATCGACTCTGTTCTATTT+TGG | 0.116444 | 7_3:+70378945 | Msa1120740:CDS |
| CCTTGCCCTTGTAATGGTTT+TGG | 0.181287 | 7_3:+70377757 | Msa1120740:CDS |
| CAAAAGCAATGAAGAGTTTC+TGG | 0.208058 | 7_3:-70374061 | None:intergenic |
| ACATTTACAGATTGAGAAAT+TGG | 0.224059 | 7_3:+70378896 | Msa1120740:intron |
| AACACAGTGATGAGCTTAAA+AGG | 0.297704 | 7_3:-70375080 | None:intergenic |
| CCAATAGGTGGAGGGAATTC+AGG | 0.313772 | 7_3:+70376358 | Msa1120740:intron |
| GAATAACATAGCGAAGGATA+TGG | 0.377399 | 7_3:-70377401 | None:intergenic |
| CATTCATAGAAGAACCTCTT+TGG | 0.380443 | 7_3:-70379150 | None:intergenic |
| TGGTTGCTTTCTTGCTGCTC+TGG | 0.389334 | 7_3:+70377074 | Msa1120740:CDS |
| AGACTGTAGCAATGGCAAAC+TGG | 0.401212 | 7_3:+70374012 | Msa1120740:CDS |
| CGCTATGTTATTCTCTTCAT+CGG | 0.422285 | 7_3:+70377411 | Msa1120740:CDS |
| TACTGGTTGATCTTGCCTGC+TGG | 0.424141 | 7_3:+70376425 | Msa1120740:CDS |
| GTCTGCCCTTGCCCTTGTAA+TGG | 0.430059 | 7_3:+70377751 | Msa1120740:CDS |
| CGCATCTTTGTACCTTGGAC+TGG | 0.433553 | 7_3:+70378364 | Msa1120740:CDS |
| CTCTCTCCATGTTACTCCCA+TGG | 0.450319 | 7_3:+70379028 | Msa1120740:three_prime_UTR |
| GACTGTAGCAATGGCAAACT+GGG | 0.469641 | 7_3:+70374013 | Msa1120740:CDS |
| CTTTGCGCATCTTTGTACCT+TGG | 0.478478 | 7_3:+70378359 | Msa1120740:CDS |
| GCATCCAAGCTGTTTGTCGC+TGG | 0.488736 | 7_3:+70378918 | Msa1120740:CDS |
| CTTACTGCAAGGATTGCTGC+TGG | 0.492007 | 7_3:+70377054 | Msa1120740:CDS |
| CCCCACCCAAAACCATTACA+AGG | 0.500731 | 7_3:-70377763 | None:intergenic |
| ATCGCTTGTTTGCTCACTTG+TGG | 0.509515 | 7_3:+70375125 | Msa1120740:CDS |
| TATGTTAGCGAGACAGAAAA+CGG | 0.511561 | 7_3:-70377197 | None:intergenic |
| GGTTCATGCAAACGAGGGAG+GGG | 0.535060 | 7_3:+70376379 | Msa1120740:CDS |
| GGCTGCAAAGAATGATGCCA+TGG | 0.537181 | 7_3:-70379045 | None:intergenic |
| CTTGCCAGCGACAAACAGCT+TGG | 0.538455 | 7_3:-70378922 | None:intergenic |
| TTGTTTGCTCACTTGTGGCA+AGG | 0.543022 | 7_3:+70375130 | Msa1120740:CDS |
| CTACAAATATTCTTACTGCA+AGG | 0.548085 | 7_3:+70377043 | Msa1120740:CDS |
| AGGTTCATGCAAACGAGGGA+GGG | 0.551598 | 7_3:+70376378 | Msa1120740:CDS |
| TAGTTAAAATGAAGCGTATG+TGG | 0.551992 | 7_3:-70379124 | None:intergenic |
| ATGTTAGCGAGACAGAAAAC+GGG | 0.584893 | 7_3:-70377196 | None:intergenic |
| CCAAAACCATTACAAGGGCA+AGG | 0.586840 | 7_3:-70377757 | None:intergenic |
| CAGGTTCATGCAAACGAGGG+AGG | 0.605633 | 7_3:+70376377 | Msa1120740:CDS |
| GTTTAAGGAGACTGTAGCAA+TGG | 0.605944 | 7_3:+70374004 | Msa1120740:CDS |
| TGAAGAGAATAACATAGCGA+AGG | 0.615134 | 7_3:-70377407 | None:intergenic |
| GGGGTAACACAGACGCGTGG+TGG | 0.619279 | 7_3:+70376398 | Msa1120740:CDS |
| AATTCAGGTTCATGCAAACG+AGG | 0.624880 | 7_3:+70376373 | Msa1120740:CDS |
| GTTTGATGCCAATAGGTGGA+GGG | 0.627009 | 7_3:+70376350 | Msa1120740:intron |
| TGTGGTCATTACAGCTATGG+AGG | 0.630068 | 7_3:+70375042 | Msa1120740:intron |
| ACACTGCGAGGACTCTGTAT+CGG | 0.643426 | 7_3:+70377238 | Msa1120740:CDS |
| TGTTGGTAGATAAAAGGGAG+CGG | 0.649125 | 7_3:-70373933 | None:intergenic |
| ATGATAATATGACCAGTCCA+AGG | 0.649470 | 7_3:-70378376 | None:intergenic |
| CAAAACCATTACAAGGGCAA+GGG | 0.650178 | 7_3:-70377756 | None:intergenic |
| GCTGCAAAGAATGATGCCAT+GGG | 0.664115 | 7_3:-70379044 | None:intergenic |
| CCCACCCAAAACCATTACAA+GGG | 0.672104 | 7_3:-70377762 | None:intergenic |
| GGACTGGTCATATTATCATG+AGG | 0.678397 | 7_3:+70378380 | Msa1120740:CDS |
| ATGATGCCATGGGAGTAACA+TGG | 0.681838 | 7_3:-70379034 | None:intergenic |
| GGAGGGGTAACACAGACGCG+TGG | 0.683153 | 7_3:+70376395 | Msa1120740:CDS |
| AGGTACGAGGAGGATGACAA+CGG | 0.703171 | 7_3:-70374096 | None:intergenic |
| ATTCAGGTTCATGCAAACGA+GGG | 0.703449 | 7_3:+70376374 | Msa1120740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTATAAAATTA+TGG | - | chr7_3:70378834-70378853 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTTTCTGT+TGG | - | chr7_3:70373953-70373972 | None:intergenic | 10.0% |
| !!! | CTATTGATTTTTTTTTTTTT+TGG | + | chr7_3:70374310-70374329 | Msa1120740:intron | 10.0% |
| !!! | GAAGTTTTTATTTTTTTTAA+TGG | + | chr7_3:70376141-70376160 | Msa1120740:intron | 10.0% |
| !!! | TTTTCAGTTTTAATAAAATA+AGG | - | chr7_3:70376260-70376279 | None:intergenic | 10.0% |
| !! | AATTATTATGAAAAATTGAT+AGG | + | chr7_3:70379080-70379099 | Msa1120740:three_prime_UTR | 10.0% |
| !!! | AATTAAAATTTGTTTGAGAT+TGG | + | chr7_3:70374497-70374516 | Msa1120740:intron | 15.0% |
| !!! | ATTGATTTGATTTTGAAAAT+TGG | - | chr7_3:70374595-70374614 | None:intergenic | 15.0% |
| !!! | AATTTTCAAAATCAAATCAA+TGG | + | chr7_3:70374594-70374613 | Msa1120740:intron | 15.0% |
| !! | AAAATAATTAATAAACCTCT+TGG | - | chr7_3:70374669-70374688 | None:intergenic | 15.0% |
| !!! | CTGTATTTTTAATTAATTTG+TGG | + | chr7_3:70375940-70375959 | Msa1120740:intron | 15.0% |
| !! | ATATTTATAAACCTCATTAT+TGG | - | chr7_3:70376857-70376876 | None:intergenic | 15.0% |
| !! | GATAATATTTAGATTTAGAT+AGG | - | chr7_3:70378564-70378583 | None:intergenic | 15.0% |
| !!! | TTTGAATTTTGTTGAGTTTA+AGG | + | chr7_3:70373989-70374008 | Msa1120740:CDS | 20.0% |
| !! | TAGAAAAAAGCTTATGAATT+TGG | + | chr7_3:70374266-70374285 | Msa1120740:intron | 20.0% |
| !!! | CAATTGAATTTTTCAAAACA+AGG | + | chr7_3:70374825-70374844 | Msa1120740:intron | 20.0% |
| !!! | TCATGTAGTTTTTTTGTTTT+TGG | + | chr7_3:70374961-70374980 | Msa1120740:intron | 20.0% |
| !!! | CATGTAGTTTTTTTGTTTTT+GGG | + | chr7_3:70374962-70374981 | Msa1120740:intron | 20.0% |
| !!! | ATTTTGTTGCATTTTATACA+CGG | + | chr7_3:70375451-70375470 | Msa1120740:intron | 20.0% |
| !!! | TATAATTCATTTTGATGTCA+AGG | - | chr7_3:70375770-70375789 | None:intergenic | 20.0% |
| !! | TGAATTATATGAACAGATAA+AGG | + | chr7_3:70375781-70375800 | Msa1120740:intron | 20.0% |
| !! | GAATTATATGAACAGATAAA+GGG | + | chr7_3:70375782-70375801 | Msa1120740:intron | 20.0% |
| !! | AATTATATGAACAGATAAAG+GGG | + | chr7_3:70375783-70375802 | Msa1120740:intron | 20.0% |
| !!! | TACAATCTTCTGAAATAAAA+AGG | + | chr7_3:70377271-70377290 | Msa1120740:intron | 20.0% |
| !!! | CTAATTATGATTTGATTTTC+AGG | + | chr7_3:70377539-70377558 | Msa1120740:intron | 20.0% |
| !! | AAAATGAAACGTATAAAAAG+TGG | - | chr7_3:70377606-70377625 | None:intergenic | 20.0% |
| !!! | TATACGTTTCATTTTCAATT+TGG | + | chr7_3:70377611-70377630 | Msa1120740:intron | 20.0% |
| !! | ATTCAATCATATGATATAAG+TGG | - | chr7_3:70377655-70377674 | None:intergenic | 20.0% |
| !!! | TCATATGATTGAATTTTGTA+TGG | + | chr7_3:70377661-70377680 | Msa1120740:intron | 20.0% |
| !! | AGTGAATTGACAAAATAAAT+AGG | + | chr7_3:70378119-70378138 | Msa1120740:intron | 20.0% |
| !! | ATTGACAAAATAAATAGGAT+AGG | + | chr7_3:70378124-70378143 | Msa1120740:intron | 20.0% |
| !!! | TATAATGTATTCCACTTTTA+GGG | + | chr7_3:70378316-70378335 | Msa1120740:intron | 20.0% |
| !! | TTTACATTCTTTACACTAAA+TGG | - | chr7_3:70378496-70378515 | None:intergenic | 20.0% |
| !! | ATTTAGTGTAAAGAATGTAA+AGG | + | chr7_3:70378495-70378514 | Msa1120740:intron | 20.0% |
| !! | AGATTTAGATAGGAAAAAAA+AGG | - | chr7_3:70378554-70378573 | None:intergenic | 20.0% |
| !! | CATGAAAGTAATTTGATTAT+TGG | - | chr7_3:70378658-70378677 | None:intergenic | 20.0% |
| !!! | ATGCATAAATTTTGATAGAA+TGG | + | chr7_3:70379170-70379189 | Msa1120740:three_prime_UTR | 20.0% |
| !!! | TTTTCTGTTGGTAGATAAAA+GGG | - | chr7_3:70373941-70373960 | None:intergenic | 25.0% |
| !!! | TTTTTCTGTTGGTAGATAAA+AGG | - | chr7_3:70373942-70373961 | None:intergenic | 25.0% |
| ! | CCTCAACAATAAAGAAAAAT+GGG | - | chr7_3:70374137-70374156 | None:intergenic | 25.0% |
| ! | TCCTCAACAATAAAGAAAAA+TGG | - | chr7_3:70374138-70374157 | None:intergenic | 25.0% |
| !!! | TTTTGAAAATTGGATTTCCT+CGG | - | chr7_3:70374585-70374604 | None:intergenic | 25.0% |
| !!! | AATCAATGGATTTTTCCATT+TGG | + | chr7_3:70374608-70374627 | Msa1120740:intron | 25.0% |
| !!! | ATCAATGGATTTTTCCATTT+GGG | + | chr7_3:70374609-70374628 | Msa1120740:intron | 25.0% |
| ! | AGGTAGTATTTATTCTGATT+AGG | - | chr7_3:70374765-70374784 | None:intergenic | 25.0% |
| ! | TAATCAGAATAAATACTACC+TGG | + | chr7_3:70374764-70374783 | Msa1120740:intron | 25.0% |
| ! | ATAGTATACGATAAAGACTA+AGG | - | chr7_3:70374852-70374871 | None:intergenic | 25.0% |
| ! | TTTATATGCTGCATTGAATT+TGG | + | chr7_3:70374875-70374894 | Msa1120740:intron | 25.0% |
| ! | CAAGGTAAAACTTTAAATGT+AGG | + | chr7_3:70375148-70375167 | Msa1120740:intron | 25.0% |
| ! | AAACATGAAACATGTTATAG+AGG | - | chr7_3:70375223-70375242 | None:intergenic | 25.0% |
| ! | ACCAACTAAAAATTATTAGC+AGG | + | chr7_3:70375492-70375511 | Msa1120740:intron | 25.0% |
| ! | CCAACTAAAAATTATTAGCA+GGG | + | chr7_3:70375493-70375512 | Msa1120740:intron | 25.0% |
| ! | AGATTGTAAAGTTAGTTAAC+CGG | + | chr7_3:70375530-70375549 | Msa1120740:intron | 25.0% |
| !!! | AAGTTTTGATTTGACAACTA+GGG | + | chr7_3:70375708-70375727 | Msa1120740:intron | 25.0% |
| ! | ATTATATGAACAGATAAAGG+GGG | + | chr7_3:70375784-70375803 | Msa1120740:intron | 25.0% |
| ! | ATTATGGATTCATAGATTCA+AGG | + | chr7_3:70376001-70376020 | Msa1120740:intron | 25.0% |
| ! | TTAATAAAATAAGGCTGATG+AGG | - | chr7_3:70376251-70376270 | None:intergenic | 25.0% |
| ! | ACATGCATTGGAAATAAATA+TGG | - | chr7_3:70376317-70376336 | None:intergenic | 25.0% |
| !! | TAGATTGAATTTGAAGTGTT+TGG | - | chr7_3:70376662-70376681 | None:intergenic | 25.0% |
| ! | ATAAAGCCTCATTTCAAAAT+TGG | - | chr7_3:70376752-70376771 | None:intergenic | 25.0% |
| ! | TTTATAAACCTCATTATTGG+CGG | - | chr7_3:70376854-70376873 | None:intergenic | 25.0% |
| !!! | AAATCATATGCTTGCTTTTA+AGG | - | chr7_3:70376921-70376940 | None:intergenic | 25.0% |
| ! | TTCTTGATCAATGAATATCA+GGG | + | chr7_3:70377328-70377347 | Msa1120740:intron | 25.0% |
| !!! | TTGTTTTTATTGCTGTCATT+TGG | + | chr7_3:70377355-70377374 | Msa1120740:CDS | 25.0% |
| ! | GACAAGTTCAAAATATTTGA+AGG | - | chr7_3:70377463-70377482 | None:intergenic | 25.0% |
| !!! | AACAGTTTGTTTTCAGTTTA+TGG | + | chr7_3:70377569-70377588 | Msa1120740:CDS | 25.0% |
| !!! | ATTTGGTGAGTTTTTTCTTA+TGG | + | chr7_3:70377790-70377809 | Msa1120740:intron | 25.0% |
| !!! | GGTTTTATAGGATTGAAATT+TGG | + | chr7_3:70377858-70377877 | Msa1120740:intron | 25.0% |
| !!! | TAGTGGGCTTTATTTATTAT+AGG | - | chr7_3:70377904-70377923 | None:intergenic | 25.0% |
| ! | AAACGAGCATAAAAAATAGT+GGG | - | chr7_3:70377920-70377939 | None:intergenic | 25.0% |
| ! | AAAACGAGCATAAAAAATAG+TGG | - | chr7_3:70377921-70377940 | None:intergenic | 25.0% |
| ! | AACATCTGCAAAATTATTGT+AGG | + | chr7_3:70378024-70378043 | Msa1120740:intron | 25.0% |
| ! | TGGATGATTAATAAGGAAAA+AGG | + | chr7_3:70378151-70378170 | Msa1120740:intron | 25.0% |
| ! | AAGTGGAATACATTATAGAA+AGG | - | chr7_3:70378313-70378332 | None:intergenic | 25.0% |
| !!! | CTATAATGTATTCCACTTTT+AGG | + | chr7_3:70378315-70378334 | Msa1120740:intron | 25.0% |
| !!! | ATAATGTATTCCACTTTTAG+GGG | + | chr7_3:70378317-70378336 | Msa1120740:intron | 25.0% |
| ! | AGTAATTTGATTATTGGAGA+AGG | - | chr7_3:70378652-70378671 | None:intergenic | 25.0% |
| ! | ACATTTACAGATTGAGAAAT+TGG | + | chr7_3:70378896-70378915 | Msa1120740:intron | 25.0% |
| !!! | ATACACTTTTTTCAATTGCT+GGG | + | chr7_3:70378999-70379018 | Msa1120740:three_prime_UTR | 25.0% |
| !! | AAACTCTTCATTGCTTTTGT+TGG | + | chr7_3:70374065-70374084 | Msa1120740:CDS | 30.0% |
| !! | CCCATTTTTCTTTATTGTTG+AGG | + | chr7_3:70374134-70374153 | Msa1120740:intron | 30.0% |
| ! | CTCATTTTCCATTAGAATCA+AGG | + | chr7_3:70374357-70374376 | Msa1120740:intron | 30.0% |
| AGTTTGGTAGATAGATCAAT+TGG | + | chr7_3:70374735-70374754 | Msa1120740:intron | 30.0% | |
| GTTTGGTAGATAGATCAATT+GGG | + | chr7_3:70374736-70374755 | Msa1120740:intron | 30.0% | |
| GTTATGCTAATACTTTGTTG+TGG | + | chr7_3:70375024-70375043 | Msa1120740:intron | 30.0% | |
| GAGGAAAAATTCATCAAAAG+TGG | - | chr7_3:70375204-70375223 | None:intergenic | 30.0% | |
| !!! | CCCTGCTAATAATTTTTAGT+TGG | - | chr7_3:70375496-70375515 | None:intergenic | 30.0% |
| TAAAAATTATTAGCAGGGCA+TGG | + | chr7_3:70375498-70375517 | Msa1120740:intron | 30.0% | |
| GACAATCACTAAGATCATTA+AGG | - | chr7_3:70375590-70375609 | None:intergenic | 30.0% | |
| AGTAAGACTCAAACTTTGAA+AGG | + | chr7_3:70375628-70375647 | Msa1120740:intron | 30.0% | |
| !!! | GAAGTTTTGATTTGACAACT+AGG | + | chr7_3:70375707-70375726 | Msa1120740:intron | 30.0% |
| AAGATTCTTGCATGTTTACA+AGG | - | chr7_3:70375900-70375919 | None:intergenic | 30.0% | |
| ACTATCCAGCTTACAAATTA+TGG | + | chr7_3:70375985-70376004 | Msa1120740:intron | 30.0% | |
| ! | TGAATCCATAATTTGTAAGC+TGG | - | chr7_3:70375993-70376012 | None:intergenic | 30.0% |
| TAACATGAAGCAGAATGTAT+TGG | - | chr7_3:70376198-70376217 | None:intergenic | 30.0% | |
| AACAATGATTCAACATGCAT+TGG | - | chr7_3:70376329-70376348 | None:intergenic | 30.0% | |
| ! | ATTGTTAGTTTGATGCCAAT+AGG | + | chr7_3:70376343-70376362 | Msa1120740:intron | 30.0% |
| ATATGCGAACTGAAAACTAT+TGG | - | chr7_3:70376468-70376487 | None:intergenic | 30.0% | |
| ! | TCGCATATTAACTTTGAGTT+AGG | + | chr7_3:70376480-70376499 | Msa1120740:intron | 30.0% |
| ! | CTCTATTTGGTAGAAAGTAT+CGG | - | chr7_3:70376713-70376732 | None:intergenic | 30.0% |
| TTATAAACCTCATTATTGGC+GGG | - | chr7_3:70376853-70376872 | None:intergenic | 30.0% | |
| TCAATGCTATAAACCTTGAA+TGG | + | chr7_3:70376878-70376897 | Msa1120740:intron | 30.0% | |
| !!! | TATGCTTGCTTTTAAGGTTT+GGG | - | chr7_3:70376915-70376934 | None:intergenic | 30.0% |
| !!! | ATATGCTTGCTTTTAAGGTT+TGG | - | chr7_3:70376916-70376935 | None:intergenic | 30.0% |
| GTATTTACCATTTCTCTGAT+TGG | + | chr7_3:70376967-70376986 | Msa1120740:intron | 30.0% | |
| AGAAAAACCAATCAGAGAAA+TGG | - | chr7_3:70376977-70376996 | None:intergenic | 30.0% | |
| ! | AGATCTTGGTTCATCATTTT+GGG | + | chr7_3:70376999-70377018 | Msa1120740:intron | 30.0% |
| CTACAAATATTCTTACTGCA+AGG | + | chr7_3:70377043-70377062 | Msa1120740:CDS | 30.0% | |
| AAAGGAAAGACGATATCATT+AGG | + | chr7_3:70377289-70377308 | Msa1120740:intron | 30.0% | |
| AAGGAAAGACGATATCATTA+GGG | + | chr7_3:70377290-70377309 | Msa1120740:intron | 30.0% | |
| CTTCTTGATCAATGAATATC+AGG | + | chr7_3:70377327-70377346 | Msa1120740:intron | 30.0% | |
| !! | AAATATTTTGAACTTGTCCC+TGG | + | chr7_3:70377465-70377484 | Msa1120740:intron | 30.0% |
| !! | TGGTATTTGTGTCATTTCTT+TGG | + | chr7_3:70377489-70377508 | Msa1120740:intron | 30.0% |
| !! | TGTCATTTCTTTGGAATGTA+TGG | + | chr7_3:70377498-70377517 | Msa1120740:intron | 30.0% |
| ! | TCGATACAAAAAAGTCCTTT+TGG | + | chr7_3:70377822-70377841 | Msa1120740:intron | 30.0% |
| ! | TTACCCACTTTCTTATTTGT+TGG | + | chr7_3:70378077-70378096 | Msa1120740:intron | 30.0% |
| ! | TACCCACTTTCTTATTTGTT+GGG | + | chr7_3:70378078-70378097 | Msa1120740:intron | 30.0% |
| TTCCCAACAAATAAGAAAGT+GGG | - | chr7_3:70378083-70378102 | None:intergenic | 30.0% | |
| AAATAAATAGGATAGGACAG+TGG | + | chr7_3:70378131-70378150 | Msa1120740:intron | 30.0% | |
| ATGCTTACCATCTTTAACAT+TGG | + | chr7_3:70378186-70378205 | Msa1120740:intron | 30.0% | |
| AAATCTTTCCATAACCACTT+GGG | + | chr7_3:70378441-70378460 | Msa1120740:intron | 30.0% | |
| AAAAGAGAAAATTGAGCTCT+CGG | - | chr7_3:70378685-70378704 | None:intergenic | 30.0% | |
| AATTCGTCATCAATAAGAAC+TGG | - | chr7_3:70378749-70378768 | None:intergenic | 30.0% | |
| !!! | GATGACGAATTGATGTTTTT+TGG | + | chr7_3:70378758-70378777 | Msa1120740:intron | 30.0% |
| !!! | ATATCGACTCTGTTCTATTT+TGG | + | chr7_3:70378945-70378964 | Msa1120740:CDS | 30.0% |
| !!! | CATACACTTTTTTCAATTGC+TGG | + | chr7_3:70378998-70379017 | Msa1120740:three_prime_UTR | 30.0% |
| TAGTTAAAATGAAGCGTATG+TGG | - | chr7_3:70379127-70379146 | None:intergenic | 30.0% | |
| !!! | CATTTTAACTATAGCCAAAG+AGG | + | chr7_3:70379136-70379155 | Msa1120740:three_prime_UTR | 30.0% |
| !!! | ATAAAAGGGAGCGGTTTTTT+TGG | - | chr7_3:70373927-70373946 | None:intergenic | 35.0% |
| CAAAAGCAATGAAGAGTTTC+TGG | - | chr7_3:70374064-70374083 | None:intergenic | 35.0% | |
| ! | AGACTACCAAGTTTAAGATC+TGG | - | chr7_3:70374463-70374482 | None:intergenic | 35.0% |
| ! | ATGGATTTTTCCATTTGGGA+AGG | + | chr7_3:70374613-70374632 | Msa1120740:intron | 35.0% |
| ! | GGATTGTTGTTAAAACAGTG+AGG | + | chr7_3:70374896-70374915 | Msa1120740:intron | 35.0% |
| TGTTGTTAAAACAGTGAGGT+TGG | + | chr7_3:70374900-70374919 | Msa1120740:intron | 35.0% | |
| AACACAGTGATGAGCTTAAA+AGG | - | chr7_3:70375083-70375102 | None:intergenic | 35.0% | |
| TCAAAACCTCAGAGAATTTC+TGG | + | chr7_3:70375313-70375332 | Msa1120740:intron | 35.0% | |
| CAAAACCTCAGAGAATTTCT+GGG | + | chr7_3:70375314-70375333 | Msa1120740:intron | 35.0% | |
| ACTAAGTTGCTAGTGAACAA+TGG | - | chr7_3:70375388-70375407 | None:intergenic | 35.0% | |
| CACTAGCAACTTAGTAAGAA+TGG | + | chr7_3:70375393-70375412 | Msa1120740:intron | 35.0% | |
| ! | TGCATTTTATACACGGATGA+TGG | + | chr7_3:70375458-70375477 | Msa1120740:intron | 35.0% |
| ! | AGACTCAAACTTTGAAAGGT+AGG | + | chr7_3:70375632-70375651 | Msa1120740:intron | 35.0% |
| ! | GACTCAAACTTTGAAAGGTA+GGG | + | chr7_3:70375633-70375652 | Msa1120740:intron | 35.0% |
| ! | ACTCAAACTTTGAAAGGTAG+GGG | + | chr7_3:70375634-70375653 | Msa1120740:intron | 35.0% |
| AGGGGTTATAGAACTATTCT+TGG | + | chr7_3:70375652-70375671 | Msa1120740:intron | 35.0% | |
| !!! | TTACGCTCTTTTGAAGCTAT+TGG | + | chr7_3:70375685-70375704 | Msa1120740:intron | 35.0% |
| AAGGGGGAAAAACACAAAAA+AGG | + | chr7_3:70375800-70375819 | Msa1120740:intron | 35.0% | |
| TACTGTCATGGAATACAAAC+TGG | - | chr7_3:70375828-70375847 | None:intergenic | 35.0% | |
| AAGAACTTGTAGTACTGTCA+TGG | - | chr7_3:70375840-70375859 | None:intergenic | 35.0% | |
| ! | CATAGTTGCTAAGAGTATGA+AGG | - | chr7_3:70375877-70375896 | None:intergenic | 35.0% |
| TGCTTCATGTTAGCATTATG+TGG | + | chr7_3:70376206-70376225 | Msa1120740:intron | 35.0% | |
| AAAAATGCATTACATCCAGC+AGG | - | chr7_3:70376443-70376462 | None:intergenic | 35.0% | |
| CAGGAGATTTAGTCTCTATT+TGG | - | chr7_3:70376726-70376745 | None:intergenic | 35.0% | |
| ! | CTCATTTCAAAATTGGCTTC+AGG | - | chr7_3:70376745-70376764 | None:intergenic | 35.0% |
| !!! | CTGAAGCCAATTTTGAAATG+AGG | + | chr7_3:70376743-70376762 | Msa1120740:intron | 35.0% |
| !! | GTGGTGTTGTTAGTATCAAA+AGG | - | chr7_3:70376782-70376801 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTTCTCCAGATCT+TGG | + | chr7_3:70376985-70377004 | Msa1120740:intron | 35.0% |
| CAAAATGATGAACCAAGATC+TGG | - | chr7_3:70377000-70377019 | None:intergenic | 35.0% | |
| ! | CAGATCTTGGTTCATCATTT+TGG | + | chr7_3:70376998-70377017 | Msa1120740:intron | 35.0% |
| ! | GATCTTGGTTCATCATTTTG+GGG | + | chr7_3:70377000-70377019 | Msa1120740:intron | 35.0% |
| TATGTTAGCGAGACAGAAAA+CGG | - | chr7_3:70377200-70377219 | None:intergenic | 35.0% | |
| ACATACCCTTATCCAAAAAG+TGG | + | chr7_3:70377215-70377234 | Msa1120740:CDS | 35.0% | |
| !!! | AGTGTCCACTTTTTGGATAA+GGG | - | chr7_3:70377223-70377242 | None:intergenic | 35.0% |
| TTTGAAGGAAACATGTGAAG+AGG | - | chr7_3:70377448-70377467 | None:intergenic | 35.0% | |
| AATGACACAAATACCAACCA+GGG | - | chr7_3:70377485-70377504 | None:intergenic | 35.0% | |
| AAATGACACAAATACCAACC+AGG | - | chr7_3:70377486-70377505 | None:intergenic | 35.0% | |
| CCTATAAAACCAGTAACTGT+TGG | - | chr7_3:70377849-70377868 | None:intergenic | 35.0% | |
| !!! | CCAACAGTTACTGGTTTTAT+AGG | + | chr7_3:70377846-70377865 | Msa1120740:intron | 35.0% |
| CTTCCCAACAAATAAGAAAG+TGG | - | chr7_3:70378084-70378103 | None:intergenic | 35.0% | |
| ! | TTCTTATTTGTTGGGAAGAG+AGG | + | chr7_3:70378086-70378105 | Msa1120740:intron | 35.0% |
| ! | TCTTATTTGTTGGGAAGAGA+GGG | + | chr7_3:70378087-70378106 | Msa1120740:intron | 35.0% |
| AGGACAGTGGATGATTAATA+AGG | + | chr7_3:70378144-70378163 | Msa1120740:intron | 35.0% | |
| TTCGTCTCCAATGTTAAAGA+TGG | - | chr7_3:70378196-70378215 | None:intergenic | 35.0% | |
| AACCGTAATAGTATAGCCAT+AGG | + | chr7_3:70378227-70378246 | Msa1120740:intron | 35.0% | |
| ACCGTAATAGTATAGCCATA+GGG | + | chr7_3:70378228-70378247 | Msa1120740:intron | 35.0% | |
| ATGATAATATGACCAGTCCA+AGG | - | chr7_3:70378379-70378398 | None:intergenic | 35.0% | |
| CAAATCTTTCCATAACCACT+TGG | + | chr7_3:70378440-70378459 | Msa1120740:intron | 35.0% | |
| ! | ATTTTCAACCCAAGTGGTTA+TGG | - | chr7_3:70378452-70378471 | None:intergenic | 35.0% |
| ATTGGAGAAGGTGATTATGA+TGG | - | chr7_3:70378640-70378659 | None:intergenic | 35.0% | |
| CATTCATAGAAGAACCTCTT+TGG | - | chr7_3:70379153-70379172 | None:intergenic | 35.0% | |
| !!! | GGAGCGGTTTTTTTGGTTTA+GGG | - | chr7_3:70373920-70373939 | None:intergenic | 40.0% |
| ! | TGTTGGTAGATAAAAGGGAG+CGG | - | chr7_3:70373936-70373955 | None:intergenic | 40.0% |
| GTTTAAGGAGACTGTAGCAA+TGG | + | chr7_3:70374004-70374023 | Msa1120740:CDS | 40.0% | |
| ATCTCGGTCCTTGATTCTAA+TGG | - | chr7_3:70374368-70374387 | None:intergenic | 40.0% | |
| ! | TTGTTTGAGATTGGACTGTC+TGG | + | chr7_3:70374506-70374525 | Msa1120740:intron | 40.0% |
| CTCATGAAAACCTTCCCAAA+TGG | - | chr7_3:70374626-70374645 | None:intergenic | 40.0% | |
| ! | AATCTCAGACTAGTTGTGAC+TGG | + | chr7_3:70374707-70374726 | Msa1120740:intron | 40.0% |
| GTTGTGACTGGATCAAAGTT+TGG | + | chr7_3:70374719-70374738 | Msa1120740:intron | 40.0% | |
| GTTGTTAAGTTCACACATCC+AGG | - | chr7_3:70374785-70374804 | None:intergenic | 40.0% | |
| GGATGTGTGAACTTAACAAC+CGG | + | chr7_3:70374785-70374804 | Msa1120740:intron | 40.0% | |
| GATGTGTGAACTTAACAACC+GGG | + | chr7_3:70374786-70374805 | Msa1120740:intron | 40.0% | |
| ! | TGTCAAATCTGAAGTCAACC+CGG | - | chr7_3:70374807-70374826 | None:intergenic | 40.0% |
| TACAATGTCATGTGTCTCAG+TGG | + | chr7_3:70374985-70375004 | Msa1120740:intron | 40.0% | |
| TGTTGTGGTCATTACAGCTA+TGG | + | chr7_3:70375039-70375058 | Msa1120740:intron | 40.0% | |
| CTGTATGTTCACGTTCTTCA+GGG | - | chr7_3:70375262-70375281 | None:intergenic | 40.0% | |
| TCTGTATGTTCACGTTCTTC+AGG | - | chr7_3:70375263-70375282 | None:intergenic | 40.0% | |
| AACAGCAATAAGAGCCACTT+TGG | - | chr7_3:70375341-70375360 | None:intergenic | 40.0% | |
| AGTTGCTAGTGAACAATGGT+TGG | - | chr7_3:70375384-70375403 | None:intergenic | 40.0% | |
| !! | AGCTTTGAAAGCTCGTCTAT+TGG | + | chr7_3:70375420-70375439 | Msa1120740:intron | 40.0% |
| AGATCATTAAGGCAAAACCC+TGG | - | chr7_3:70375579-70375598 | None:intergenic | 40.0% | |
| ! | TTGATTTGACAACTAGGGAC+AGG | + | chr7_3:70375713-70375732 | Msa1120740:intron | 40.0% |
| ! | CACTGATGCATTTGGAATTC+AGG | - | chr7_3:70376102-70376121 | None:intergenic | 40.0% |
| ! | ATTATGTGGTTTTCTGCTGC+TGG | + | chr7_3:70376220-70376239 | Msa1120740:intron | 40.0% |
| ! | GTTAGTTTGATGCCAATAGG+TGG | + | chr7_3:70376346-70376365 | Msa1120740:intron | 40.0% |
| ! | AATTCAGGTTCATGCAAACG+AGG | + | chr7_3:70376373-70376392 | Msa1120740:CDS | 40.0% |
| ! | ATTCAGGTTCATGCAAACGA+GGG | + | chr7_3:70376374-70376393 | Msa1120740:CDS | 40.0% |
| !! | TGGTTCATCATTTTGGGGAA+TGG | + | chr7_3:70377005-70377024 | Msa1120740:CDS | 40.0% |
| ATGTTAGCGAGACAGAAAAC+GGG | - | chr7_3:70377199-70377218 | None:intergenic | 40.0% | |
| !!! | CAGTGTCCACTTTTTGGATA+AGG | - | chr7_3:70377224-70377243 | None:intergenic | 40.0% |
| ! | ATTTTGAACTTGTCCCTGGT+TGG | + | chr7_3:70377469-70377488 | Msa1120740:intron | 40.0% |
| CAAAACCATTACAAGGGCAA+GGG | - | chr7_3:70377759-70377778 | None:intergenic | 40.0% | |
| ! | CTTGCCCTTGTAATGGTTTT+GGG | + | chr7_3:70377758-70377777 | Msa1120740:CDS | 40.0% |
| CCCCTATGGCTATACTATTA+CGG | - | chr7_3:70378232-70378251 | None:intergenic | 40.0% | |
| CCGTAATAGTATAGCCATAG+GGG | + | chr7_3:70378229-70378248 | Msa1120740:intron | 40.0% | |
| CGTAATAGTATAGCCATAGG+GGG | + | chr7_3:70378230-70378249 | Msa1120740:intron | 40.0% | |
| CGATATCATTCCCCTAAAAG+TGG | - | chr7_3:70378330-70378349 | None:intergenic | 40.0% | |
| !! | GGACTGGTCATATTATCATG+AGG | + | chr7_3:70378380-70378399 | Msa1120740:CDS | 40.0% |
| ! | CAAGACATTTTCAACCCAAG+TGG | - | chr7_3:70378458-70378477 | None:intergenic | 40.0% |
| !!! | GGGAGCGGTTTTTTTGGTTT+AGG | - | chr7_3:70373921-70373940 | None:intergenic | 45.0% |
| AGACTGTAGCAATGGCAAAC+TGG | + | chr7_3:70374012-70374031 | Msa1120740:CDS | 45.0% | |
| GACTGTAGCAATGGCAAACT+GGG | + | chr7_3:70374013-70374032 | Msa1120740:CDS | 45.0% | |
| ATGGGTTTAGAGAGAGAGAG+AGG | - | chr7_3:70374119-70374138 | None:intergenic | 45.0% | |
| TCAGTGATTGCATGGCTGTA+TGG | + | chr7_3:70374422-70374441 | Msa1120740:intron | 45.0% | |
| GCTGTATGGTCAAGATCAGA+CGG | + | chr7_3:70374436-70374455 | Msa1120740:intron | 45.0% | |
| GACGGTCCAGATCTTAAACT+TGG | + | chr7_3:70374454-70374473 | Msa1120740:intron | 45.0% | |
| TGTGGTCATTACAGCTATGG+AGG | + | chr7_3:70375042-70375061 | Msa1120740:intron | 45.0% | |
| ATCGCTTGTTTGCTCACTTG+TGG | + | chr7_3:70375125-70375144 | Msa1120740:CDS | 45.0% | |
| TTGTTTGCTCACTTGTGGCA+AGG | + | chr7_3:70375130-70375149 | Msa1120740:CDS | 45.0% | |
| TTGGTCCCAGAAATTCTCTG+AGG | - | chr7_3:70375322-70375341 | None:intergenic | 45.0% | |
| !! | GAGAATTTCTGGGACCAAAG+TGG | + | chr7_3:70375324-70375343 | Msa1120740:intron | 45.0% |
| AACCGGTGAGTTGCTTATGA+TGG | + | chr7_3:70375547-70375566 | Msa1120740:intron | 45.0% | |
| CTCCATCATAAGCAACTCAC+CGG | - | chr7_3:70375552-70375571 | None:intergenic | 45.0% | |
| !! | TGCTTATGATGGAGAGTACC+AGG | + | chr7_3:70375558-70375577 | Msa1120740:intron | 45.0% |
| !! | GCTTATGATGGAGAGTACCA+GGG | + | chr7_3:70375559-70375578 | Msa1120740:intron | 45.0% |
| !! | ACATGCAGCACTGATGCATT+TGG | - | chr7_3:70376110-70376129 | None:intergenic | 45.0% |
| AAAATAAGGCTGATGAGGCC+CGG | - | chr7_3:70376246-70376265 | None:intergenic | 45.0% | |
| AGTTTGATGCCAATAGGTGG+AGG | + | chr7_3:70376349-70376368 | Msa1120740:intron | 45.0% | |
| GTTTGATGCCAATAGGTGGA+GGG | + | chr7_3:70376350-70376369 | Msa1120740:intron | 45.0% | |
| ! | AGCTCTAACGCTACTTGAAG+GGG | - | chr7_3:70376527-70376546 | None:intergenic | 45.0% |
| ! | GAGCTCTAACGCTACTTGAA+GGG | - | chr7_3:70376528-70376547 | None:intergenic | 45.0% |
| ! | TGAGCTCTAACGCTACTTGA+AGG | - | chr7_3:70376529-70376548 | None:intergenic | 45.0% |
| CTCATTATTGGCGGGAACTT+AGG | - | chr7_3:70376845-70376864 | None:intergenic | 45.0% | |
| CTAAGTTCCCGCCAATAATG+AGG | + | chr7_3:70376843-70376862 | Msa1120740:intron | 45.0% | |
| GGTGTCTGTGTTTCCATTCA+AGG | - | chr7_3:70376894-70376913 | None:intergenic | 45.0% | |
| AGGAAACATGTGAAGAGGAC+AGG | - | chr7_3:70377443-70377462 | None:intergenic | 45.0% | |
| CCAAAACCATTACAAGGGCA+AGG | - | chr7_3:70377760-70377779 | None:intergenic | 45.0% | |
| ! | CCTTGCCCTTGTAATGGTTT+TGG | + | chr7_3:70377757-70377776 | Msa1120740:CDS | 45.0% |
| CCCACCCAAAACCATTACAA+GGG | - | chr7_3:70377765-70377784 | None:intergenic | 45.0% | |
| !!! | CCCTTGTAATGGTTTTGGGT+GGG | + | chr7_3:70377762-70377781 | Msa1120740:CDS | 45.0% |
| !!! | CCTTGTAATGGTTTTGGGTG+GGG | + | chr7_3:70377763-70377782 | Msa1120740:CDS | 45.0% |
| !! | GTTTTGGGTGGGGAGTTATT+TGG | + | chr7_3:70377773-70377792 | Msa1120740:CDS | 45.0% |
| CCAGTAACTGTTGGTCCAAA+AGG | - | chr7_3:70377840-70377859 | None:intergenic | 45.0% | |
| ! | CCTTTTGGACCAACAGTTAC+TGG | + | chr7_3:70377837-70377856 | Msa1120740:intron | 45.0% |
| CTTTGCGCATCTTTGTACCT+TGG | + | chr7_3:70378359-70378378 | Msa1120740:CDS | 45.0% | |
| ATGATGCCATGGGAGTAACA+TGG | - | chr7_3:70379037-70379056 | None:intergenic | 45.0% | |
| GCTGCAAAGAATGATGCCAT+GGG | - | chr7_3:70379047-70379066 | None:intergenic | 45.0% | |
| !!! | ATTTTATAATTAAAATAATC+AGG | - | chr7_3:70376569-70376588 | None:intergenic | 5.0% |
| !!! | ATAATAATTTAGATTTTAAT+AGG | - | chr7_3:70379069-70379088 | None:intergenic | 5.0% |
| AGGTACGAGGAGGATGACAA+CGG | - | chr7_3:70374099-70374118 | None:intergenic | 50.0% | |
| ! | TAGAGAGAGAGAGAGGTACG+AGG | - | chr7_3:70374112-70374131 | None:intergenic | 50.0% |
| TCAATGACCGCACGGAATCT+CGG | - | chr7_3:70374384-70374403 | None:intergenic | 50.0% | |
| TCGTGCAGTCAGTGATTGCA+TGG | + | chr7_3:70374414-70374433 | Msa1120740:intron | 50.0% | |
| CACGCTGTTGAATAGCCAAG+AGG | + | chr7_3:70374651-70374670 | Msa1120740:intron | 50.0% | |
| CCTGAATTCCCTCCACCTAT+TGG | - | chr7_3:70376361-70376380 | None:intergenic | 50.0% | |
| CCAATAGGTGGAGGGAATTC+AGG | + | chr7_3:70376358-70376377 | Msa1120740:intron | 50.0% | |
| AGGTTCATGCAAACGAGGGA+GGG | + | chr7_3:70376378-70376397 | Msa1120740:CDS | 50.0% | |
| ! | TACTGGTTGATCTTGCCTGC+TGG | + | chr7_3:70376425-70376444 | Msa1120740:CDS | 50.0% |
| CACCACAAGTTGCACTGCTA+TGG | + | chr7_3:70376796-70376815 | Msa1120740:intron | 50.0% | |
| AGCCATAGCAGTGCAACTTG+TGG | - | chr7_3:70376801-70376820 | None:intergenic | 50.0% | |
| CTTACTGCAAGGATTGCTGC+TGG | + | chr7_3:70377054-70377073 | Msa1120740:CDS | 50.0% | |
| ! | TGGTTGCTTTCTTGCTGCTC+TGG | + | chr7_3:70377074-70377093 | Msa1120740:CDS | 50.0% |
| TCCAAAAAGTGGACACTGCG+AGG | + | chr7_3:70377226-70377245 | Msa1120740:CDS | 50.0% | |
| !! | TCCTCGCAGTGTCCACTTTT+TGG | - | chr7_3:70377230-70377249 | None:intergenic | 50.0% |
| ACACTGCGAGGACTCTGTAT+CGG | + | chr7_3:70377238-70377257 | Msa1120740:CDS | 50.0% | |
| !!! | GCCCTTGTAATGGTTTTGGG+TGG | + | chr7_3:70377761-70377780 | Msa1120740:CDS | 50.0% |
| CCCCACCCAAAACCATTACA+AGG | - | chr7_3:70377766-70377785 | None:intergenic | 50.0% | |
| GTTGGGAAGAGAGGGATTAC+AGG | + | chr7_3:70378095-70378114 | Msa1120740:intron | 50.0% | |
| CTATCTCACTTTGCCCCCTA+TGG | - | chr7_3:70378246-70378265 | None:intergenic | 50.0% | |
| CGCATCTTTGTACCTTGGAC+TGG | + | chr7_3:70378364-70378383 | Msa1120740:CDS | 50.0% | |
| CTCTCTCCATGTTACTCCCA+TGG | + | chr7_3:70379028-70379047 | Msa1120740:three_prime_UTR | 50.0% | |
| GGCTGCAAAGAATGATGCCA+TGG | - | chr7_3:70379048-70379067 | None:intergenic | 50.0% | |
| ! | AGAGAGAGAGAGGTACGAGG+AGG | - | chr7_3:70374109-70374128 | None:intergenic | 55.0% |
| TCAAGGACCGAGATTCCGTG+CGG | + | chr7_3:70374374-70374393 | Msa1120740:intron | 55.0% | |
| AATGTGTGCAGTCGTGACCG+AGG | + | chr7_3:70374565-70374584 | Msa1120740:intron | 55.0% | |
| ! | TGTGGTTTTCTGCTGCTGGC+CGG | + | chr7_3:70376224-70376243 | Msa1120740:intron | 55.0% |
| CAGGTTCATGCAAACGAGGG+AGG | + | chr7_3:70376377-70376396 | Msa1120740:CDS | 55.0% | |
| GGTTCATGCAAACGAGGGAG+GGG | + | chr7_3:70376379-70376398 | Msa1120740:CDS | 55.0% | |
| AGACGCGTGGTGGCATATAC+TGG | + | chr7_3:70376408-70376427 | Msa1120740:CDS | 55.0% | |
| GTCTGCCCTTGCCCTTGTAA+TGG | + | chr7_3:70377751-70377770 | Msa1120740:CDS | 55.0% | |
| GCATCCAAGCTGTTTGTCGC+TGG | + | chr7_3:70378918-70378937 | Msa1120740:CDS | 55.0% | |
| CTTGCCAGCGACAAACAGCT+TGG | - | chr7_3:70378925-70378944 | None:intergenic | 55.0% | |
| ! | TCCGTGCGGTCATTGACTGC+AGG | + | chr7_3:70374388-70374407 | Msa1120740:intron | 60.0% |
| GCCTGCAGTCAATGACCGCA+CGG | - | chr7_3:70374392-70374411 | None:intergenic | 60.0% | |
| ! | GTGGTTTTCTGCTGCTGGCC+GGG | + | chr7_3:70376225-70376244 | Msa1120740:intron | 60.0% |
| GGAGGGGTAACACAGACGCG+TGG | + | chr7_3:70376395-70376414 | Msa1120740:CDS | 65.0% | |
| GGGGTAACACAGACGCGTGG+TGG | + | chr7_3:70376398-70376417 | Msa1120740:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 70373915 | 70379213 | 70373915 | ID=Msa1120740;Name=Msa1120740 |
| chr7_3 | mRNA | 70373915 | 70379213 | 70373915 | ID=Msa1120740-mRNA-1;Parent=Msa1120740;Name=Msa1120740-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.6|0.72|0.90|0.6|0.81|11|217|329 |
| chr7_3 | exon | 70373915 | 70374112 | 70373915 | ID=Msa1120740-mRNA-1:exon:17890;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70375056 | 70375151 | 70375056 | ID=Msa1120740-mRNA-1:exon:17891;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70376365 | 70376449 | 70376365 | ID=Msa1120740-mRNA-1:exon:17892;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70377001 | 70377122 | 70377001 | ID=Msa1120740-mRNA-1:exon:17893;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70377175 | 70377259 | 70377175 | ID=Msa1120740-mRNA-1:exon:17894;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70377349 | 70377432 | 70377349 | ID=Msa1120740-mRNA-1:exon:17895;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70377561 | 70377590 | 70377561 | ID=Msa1120740-mRNA-1:exon:17896;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70377689 | 70377794 | 70377689 | ID=Msa1120740-mRNA-1:exon:17897;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70377868 | 70377895 | 70377868 | ID=Msa1120740-mRNA-1:exon:17898;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70378337 | 70378401 | 70378337 | ID=Msa1120740-mRNA-1:exon:17899;Parent=Msa1120740-mRNA-1 |
| chr7_3 | exon | 70378906 | 70379213 | 70378906 | ID=Msa1120740-mRNA-1:exon:17900;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70373915 | 70374112 | 70373915 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70375056 | 70375151 | 70375056 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70376365 | 70376449 | 70376365 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70377001 | 70377122 | 70377001 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70377175 | 70377259 | 70377175 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70377349 | 70377432 | 70377349 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70377561 | 70377590 | 70377561 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70377689 | 70377794 | 70377689 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70377868 | 70377895 | 70377868 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70378337 | 70378401 | 70378337 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | CDS | 70378906 | 70378996 | 70378906 | ID=Msa1120740-mRNA-1:cds;Parent=Msa1120740-mRNA-1 |
| chr7_3 | three_prime_UTR | 70378997 | 70379213 | 70378997 | ID=Msa1120740-mRNA-1:three_prime_utr;Parent=Msa1120740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
