AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1123660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 290 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGCAATGTGCCGTTTA+AGG 0.121253 7_3:+74624704 None:intergenic
CTGCATTTCTGATTGGAATT+TGG 0.168703 7_3:-74624158 Msa1123660:five_prime_UTR
GAAACGAACCCGGTATTAAT+TGG 0.169205 7_3:+74627229 None:intergenic
TTCTTACTTGGCTGTGTCTC+TGG 0.182741 7_3:+74624862 None:intergenic
AGCATCCTCACCGTATATTT+TGG 0.187667 7_3:+74623430 None:intergenic
TTTGACCGCGCTTGTGAAAA+TGG 0.198352 7_3:-74622922 Msa1123660:five_prime_UTR
TTCGATGGTCAGTTGCTAAT+TGG 0.222525 7_3:-74624040 Msa1123660:five_prime_UTR
TGGTTTGGTCATCAATAAAA+AGG 0.227762 7_3:+74623849 None:intergenic
GTTGGGATCCACTGTTAAAT+TGG 0.249980 7_3:+74625326 None:intergenic
TTACATTCTTTCATGAAGTT+TGG 0.253618 7_3:-74623628 Msa1123660:five_prime_UTR
AGATTCTGTTTACTTATATC+TGG 0.262444 7_3:-74627037 Msa1123660:intron
GTCCTCGTTGTGCAGCTAAT+TGG 0.265863 7_3:-74622698 Msa1123660:CDS
CACAAGCGCGGTCAAAGATT+CGG 0.268021 7_3:+74622929 None:intergenic
GTTCCAGACTTTGATGTATT+AGG 0.275187 7_3:-74623152 Msa1123660:five_prime_UTR
CGACAATCGGCCAATTGATT+TGG 0.276256 7_3:-74625868 Msa1123660:five_prime_UTR
ATCTCCTTGAATAGTATTAA+AGG 0.277779 7_3:+74624411 None:intergenic
ATACAGTAGCGCCTCAAATT+TGG 0.288785 7_3:-74627253 None:intergenic
CCTGAACCACTTCCTGATTC+TGG 0.290030 7_3:-74625222 Msa1123660:five_prime_UTR
ATAAAGATGGAAGGATCTTC+TGG 0.303933 7_3:-74623293 Msa1123660:five_prime_UTR
CAACATGCCCTTCTACATTC+AGG 0.315559 7_3:+74624787 None:intergenic
AGAACTTTGTTGTCAGATAA+TGG 0.316486 7_3:-74623269 Msa1123660:five_prime_UTR
CTCTGGGGTATGTTCTTCAT+TGG 0.318268 7_3:+74624879 None:intergenic
AGTTTCCAGTCTTGAATAGA+TGG 0.321027 7_3:+74623731 None:intergenic
CGGTTCCAAGCTTCCGCTTC+CGG 0.323766 7_3:-74627087 Msa1123660:five_prime_UTR
GAAGGTGCTGCTTAAGATTC+AGG 0.324315 7_3:+74623891 None:intergenic
TTCAGGGCTAACCGTTTCTA+TGG 0.326189 7_3:+74624804 None:intergenic
TTCAGTTTCACCAAAATATA+CGG 0.336519 7_3:-74623440 Msa1123660:five_prime_UTR
TGAAGTTTGGAAATTACATT+TGG 0.340740 7_3:-74623615 Msa1123660:five_prime_UTR
TGCAAGTGATTGTGGGGTAT+TGG 0.351945 7_3:+74625147 None:intergenic
GAATCTTAAGCAGCACCTTC+AGG 0.354317 7_3:-74623888 Msa1123660:five_prime_UTR
CTGAGAGCAGAGTCAGAATC+AGG 0.357778 7_3:+74624196 None:intergenic
AGCATTTACTATTTCATAGC+TGG 0.361317 7_3:+74624915 None:intergenic
GTGAGTCATCATTTGGGAAT+TGG 0.362781 7_3:+74625026 None:intergenic
GCACAACGAGGACTTGTATT+AGG 0.364794 7_3:+74622708 None:intergenic
TCTTACTTGGCTGTGTCTCT+GGG 0.365134 7_3:+74624863 None:intergenic
GAATGTTTGCTGCATCATAA+AGG 0.367171 7_3:+74623678 None:intergenic
CGGTGCCGGAAGCGAGATCT+AGG 0.367332 7_3:+74627118 None:intergenic
GTCTGAATTGGATCAGTATC+TGG 0.369969 7_3:-74623195 Msa1123660:five_prime_UTR
CCATCAGACAAAGTCTGAAT+TGG 0.370844 7_3:-74623207 Msa1123660:five_prime_UTR
GATGGGGTTCCTTTGTAATC+AGG 0.372513 7_3:+74623749 None:intergenic
CGGTTAGCCCTGAATGTAGA+AGG 0.372610 7_3:-74624795 Msa1123660:five_prime_UTR
TGGGAATTGGCTAGCTGATC+AGG 0.374885 7_3:+74625039 None:intergenic
CATTGTTGTGCTCTGCTTCA+CGG 0.375221 7_3:+74625619 None:intergenic
GAACTAACCACACCATTGTT+TGG 0.379336 7_3:+74625741 None:intergenic
TCGTTGCTGAGTGGTGCCTC+AGG 0.380243 7_3:+74625786 None:intergenic
AAACGAACCCGATAAGATCT+AGG 0.380461 7_3:+74627169 None:intergenic
GGTCATAGTGAGTCATCATT+TGG 0.380468 7_3:+74625019 None:intergenic
TTGATATGTTGTATTCCATT+TGG 0.381932 7_3:+74623829 None:intergenic
ACCATACTGCATCCAGTCTT+TGG 0.385506 7_3:+74622956 None:intergenic
TCAGAAGGAACAGTAGAAAC+TGG 0.387424 7_3:+74623062 None:intergenic
ATTCTTCTGTTGTTATATCA+AGG 0.388486 7_3:+74620661 None:intergenic
AGTAGAACCTACCAACATAC+TGG 0.388836 7_3:+74622866 None:intergenic
AATGTTTGCTGCATCATAAA+GGG 0.389032 7_3:+74623679 None:intergenic
CTGGTACCAGCCACCTTAAA+CGG 0.390950 7_3:-74624717 Msa1123660:five_prime_UTR
CCAGAATCAGGAAGTGGTTC+AGG 0.391394 7_3:+74625222 None:intergenic
CAATATGTCTCGGGCCATCT+TGG 0.392944 7_3:+74623091 None:intergenic
TCTGCATATGCCGGTGTTAG+TGG 0.394211 7_3:+74623338 None:intergenic
ATTCATCAAAATATTTCATA+AGG 0.399204 7_3:+74624356 None:intergenic
GGGGTATGTTCTTCATTGGT+TGG 0.401037 7_3:+74624883 None:intergenic
GTATATGAAGCATGCTGATT+AGG 0.401841 7_3:+74624649 None:intergenic
TGAACAAATGCAACAAATCC+TGG 0.406770 7_3:+74624463 None:intergenic
CTGATCAGGCGAGAGTGTTT+CGG 0.406889 7_3:+74625053 None:intergenic
TACACATCCCAACAGTCATT+TGG 0.408652 7_3:-74625115 Msa1123660:five_prime_UTR
TTTCATGCATAGGTTTAGTA+AGG 0.409761 7_3:+74623549 None:intergenic
TGAAAAGCCCTAGATCTTAT+CGG 0.410288 7_3:-74627177 Msa1123660:five_prime_UTR
CACTTGTTTGTGCCAAAGAC+TGG 0.411168 7_3:-74622968 Msa1123660:five_prime_UTR
AAGTAATGATGTGGTTGAAT+TGG 0.411533 7_3:-74625706 Msa1123660:five_prime_UTR
GAACCGTGCTGCGGCGGTGC+CGG 0.415272 7_3:+74627104 None:intergenic
TTTGGTGATTGCTGTAGTTA+TGG 0.417358 7_3:-74623492 Msa1123660:five_prime_UTR
GAGAGATTCTAGTCTGGCTT+TGG 0.418217 7_3:-74623510 Msa1123660:five_prime_UTR
AAATTGGCTAATTCATTCTC+AGG 0.423893 7_3:+74625342 None:intergenic
AAGGCATTGTCAATAAAATA+CGG 0.425601 7_3:-74623961 Msa1123660:five_prime_UTR
CTAATTGGATTTGCTCCATC+AGG 0.426380 7_3:-74622683 Msa1123660:CDS
CGTTCAAGGGGAAGTGGTGC+TGG 0.428010 7_3:-74624622 Msa1123660:five_prime_UTR
AGGATCAGAAGTGTCTAAAC+AGG 0.429136 7_3:+74623769 None:intergenic
TATCTGTCTGCATTTCTGAT+TGG 0.429274 7_3:-74624165 Msa1123660:five_prime_UTR
TTGATGGGAGAGTCGATTGT+TGG 0.429521 7_3:+74625308 None:intergenic
GATTATCAAGTATTTCTTGA+TGG 0.431485 7_3:+74625292 None:intergenic
GCAGTTCTATAACGTCGTTT+TGG 0.441463 7_3:+74624583 None:intergenic
TTAGTGGGCGATCCAGAATC+AGG 0.442864 7_3:+74625210 None:intergenic
GCATTTACTATTTCATAGCT+GGG 0.443288 7_3:+74624916 None:intergenic
TGATGGGAGAGTCGATTGTT+GGG 0.444183 7_3:+74625309 None:intergenic
AAATTTGGTCCAATTAATAC+CGG 0.444656 7_3:-74627238 Msa1123660:five_prime_UTR
TCTAAACTACGCAGAAGAGC+TGG 0.446568 7_3:+74624673 None:intergenic
TAGCTACTTCACCTTCTTCA+AGG 0.447217 7_3:+74625943 None:intergenic
TATACTCTTGCAAGTGATTG+TGG 0.448299 7_3:+74625139 None:intergenic
GTGACCTTTAATACTATTCA+AGG 0.449805 7_3:-74624415 Msa1123660:five_prime_UTR
AGACATTACCACCTCACTGC+TGG 0.450481 7_3:+74625539 None:intergenic
CTTCATATACCCCGCGTTCA+AGG 0.452616 7_3:-74624636 Msa1123660:five_prime_UTR
AGCACTGGCTCAAAAGTTGC+TGG 0.453968 7_3:-74624736 Msa1123660:five_prime_UTR
CAACCTAATACATCAAAGTC+TGG 0.454049 7_3:+74623149 None:intergenic
TCGTATGGAGATTATCAAAC+TGG 0.454668 7_3:+74625268 None:intergenic
CTTCACATGGTTGAGCATCC+AGG 0.454995 7_3:-74624481 Msa1123660:five_prime_UTR
AGACTTTGATGCCTATATCA+TGG 0.456599 7_3:-74623240 Msa1123660:five_prime_UTR
GAGTCTGTCATGCATGAAGC+AGG 0.461736 7_3:-74625465 Msa1123660:five_prime_UTR
GGTAGAAGTTTCCATGATAT+AGG 0.462285 7_3:+74623229 None:intergenic
ATGTTGTATTCCATTTGGTT+TGG 0.463820 7_3:+74623834 None:intergenic
CGGCACGGCAGTGCCGGAAG+CGG 0.466823 7_3:+74627074 None:intergenic
TATTAATTGGACCAAATTTG+AGG 0.466994 7_3:+74627242 None:intergenic
ATACTCTTGCAAGTGATTGT+GGG 0.471591 7_3:+74625140 None:intergenic
CTCAACCTAGCAACGACAAT+CGG 0.471720 7_3:-74625881 Msa1123660:five_prime_UTR
ATTATCAAGTATTTCTTGAT+GGG 0.473301 7_3:+74625293 None:intergenic
CACCACTTCCCCTTGAACGC+GGG 0.473616 7_3:+74624626 None:intergenic
CGAGGACTTGTATTAGGAAA+AGG 0.473954 7_3:+74622714 None:intergenic
GTCATAGTGAGTCATCATTT+GGG 0.474020 7_3:+74625020 None:intergenic
AGAGAGAGAGAAAGAACGAT+TGG 0.474964 7_3:+74627201 None:intergenic
ACAAGCGCGGTCAAAGATTC+GGG 0.475182 7_3:+74622930 None:intergenic
TGCCACAGGTTCAGAGTTAG+TGG 0.475718 7_3:+74625194 None:intergenic
TCAGGAAGTGGTTCAGGTGG+AGG 0.477445 7_3:+74625228 None:intergenic
AGTGTTGCCTCCAAATCAAT+TGG 0.477467 7_3:+74625858 None:intergenic
ACAAGTGCCTCCACTGTCTC+CGG 0.478247 7_3:+74622984 None:intergenic
ACATCAAAGTCTGGAACTCT+AGG 0.485617 7_3:+74623158 None:intergenic
CTGATTGGAATTTGGAAGGT+AGG 0.486782 7_3:-74624150 Msa1123660:five_prime_UTR
CAGGAATCAGCGTAAATTTG+AGG 0.488124 7_3:-74622664 Msa1123660:CDS
CAGTGCCGGAAGCGGAAGCT+TGG 0.488271 7_3:+74627082 None:intergenic
TTTAGTAAGGTCGCTAATGA+AGG 0.489500 7_3:+74623562 None:intergenic
CTTCCGGCACCGCCGCAGCA+CGG 0.489588 7_3:-74627107 Msa1123660:five_prime_UTR
CAGACTTTGATGTATTAGGT+TGG 0.489968 7_3:-74623148 Msa1123660:five_prime_UTR
CGTTGCTGAGTGGTGCCTCA+GGG 0.492412 7_3:+74625787 None:intergenic
AACATGCCCTTCTACATTCA+GGG 0.492565 7_3:+74624788 None:intergenic
CGGGCCATCTTGGAGAGTGT+GGG 0.494350 7_3:+74623101 None:intergenic
TTGTTCAAAATCTGCAACCT+CGG 0.494820 7_3:-74624447 Msa1123660:five_prime_UTR
GAAAAGCCCTAGATCTTATC+GGG 0.495119 7_3:-74627176 Msa1123660:five_prime_UTR
TCGGGCCATCTTGGAGAGTG+TGG 0.496830 7_3:+74623100 None:intergenic
TTCTTCTGTTGTTATATCAA+GGG 0.497662 7_3:+74620662 None:intergenic
ATGCATGACAGACTCAGTGC+TGG 0.497898 7_3:+74625473 None:intergenic
CAATCGGCCAATTGATTTGG+AGG 0.499034 7_3:-74625865 Msa1123660:five_prime_UTR
ATGAAAGAATGTAATAGCAG+TGG 0.500974 7_3:+74623637 None:intergenic
GCCAAAGACTGGATGCAGTA+TGG 0.501851 7_3:-74622957 Msa1123660:five_prime_UTR
TCTTGATCAATAATTATGTA+AGG 0.502466 7_3:+74624553 None:intergenic
ATGCAACATTGCTTAAAGTA+CGG 0.503617 7_3:+74624005 None:intergenic
TTCATATACCCCGCGTTCAA+GGG 0.504831 7_3:-74624635 Msa1123660:five_prime_UTR
TCAAGGGCAACTTTAGAAAG+TGG 0.506194 7_3:+74624103 None:intergenic
CTTAAACGGCACATTGCAAA+GGG 0.506564 7_3:-74624703 Msa1123660:five_prime_UTR
GTTTCCAGTCTTGAATAGAT+GGG 0.511222 7_3:+74623732 None:intergenic
GCTGGGCTGTGCTTCAGACA+TGG 0.513422 7_3:+74625557 None:intergenic
AAAACGCGGCACGGCAGTGC+CGG 0.515271 7_3:+74627068 None:intergenic
TGCAACATTGCTTAAAGTAC+GGG 0.515335 7_3:+74624006 None:intergenic
CAATTCAGACTTTGTCTGAT+GGG 0.517662 7_3:+74623208 None:intergenic
AACATATCAAATGTTGGTTG+CGG 0.520587 7_3:-74623816 Msa1123660:five_prime_UTR
GTATCGAAGTTCCTTGCGTC+CGG 0.520893 7_3:-74623003 Msa1123660:five_prime_UTR
AAATTTACGCTGATTCCTGA+TGG 0.524953 7_3:+74622668 None:intergenic
GGAACACTTTACCATAGAAA+CGG 0.526637 7_3:-74624815 Msa1123660:five_prime_UTR
TTATTGATGACCAAACCAAA+TGG 0.526661 7_3:-74623844 Msa1123660:five_prime_UTR
TGCTGGAAGCAATATAAAGA+TGG 0.526869 7_3:-74623306 Msa1123660:five_prime_UTR
TGATGGTCCAAATGACTGTT+GGG 0.527887 7_3:+74625108 None:intergenic
CCAATTCAGACTTTGTCTGA+TGG 0.528198 7_3:+74623207 None:intergenic
GTAGGTTATGTATTTATCAC+GGG 0.529010 7_3:-74624283 Msa1123660:five_prime_UTR
AACTGACCATCGAAGATAAG+TGG 0.529244 7_3:+74624049 None:intergenic
GCGTCATGACTGTCTGCCAC+AGG 0.529255 7_3:+74625180 None:intergenic
ATGATGACTCACTATGACCT+GGG 0.530285 7_3:-74625015 Msa1123660:five_prime_UTR
TATGTCAAGATTGTTGATGA+TGG 0.530406 7_3:-74623401 Msa1123660:five_prime_UTR
ACCCCGCGTTCAAGGGGAAG+TGG 0.530632 7_3:-74624628 Msa1123660:five_prime_UTR
TGTAGGTTATGTATTTATCA+CGG 0.531395 7_3:-74624284 Msa1123660:five_prime_UTR
ACTTTGATGTATTAGGTTGG+TGG 0.532207 7_3:-74623145 Msa1123660:five_prime_UTR
TATGCAGAAGAAGGATATGC+TGG 0.532839 7_3:-74623323 Msa1123660:five_prime_UTR
GACATTACCACCTCACTGCT+GGG 0.534527 7_3:+74625540 None:intergenic
AGCTTGGAACCGTGCTGCGG+CGG 0.534858 7_3:+74627098 None:intergenic
GTAGATATTCAGAAGTCGTA+TGG 0.535855 7_3:+74625253 None:intergenic
TCCTCGTTTCAAGATGAAGC+TGG 0.535948 7_3:-74623468 Msa1123660:five_prime_UTR
ATAGTGATTGGAAGTTGCAG+AGG 0.537321 7_3:-74624249 Msa1123660:five_prime_UTR
CTGGAATACACAATATGTCT+CGG 0.537366 7_3:+74623081 None:intergenic
GTACTGGAGAGATTCTAGTC+TGG 0.539158 7_3:-74623516 Msa1123660:five_prime_UTR
CTCCACTGTCTCCGGACGCA+AGG 0.539572 7_3:+74622992 None:intergenic
GAATACAACATATCAAATGT+TGG 0.540376 7_3:-74623822 Msa1123660:five_prime_UTR
AAAACCCTAGATCTCGCTTC+CGG 0.540792 7_3:-74627123 Msa1123660:five_prime_UTR
GAACCCCATCTATTCAAGAC+TGG 0.542220 7_3:-74623736 Msa1123660:five_prime_UTR
CAAGCCCAATCTCTCTCTCT+CGG 0.543041 7_3:-74627146 Msa1123660:five_prime_UTR
ATTGGCCGATTGTCGTTGCT+AGG 0.543721 7_3:+74625876 None:intergenic
CCGGTGTTAGTGGCAGAGGA+AGG 0.544115 7_3:+74623348 None:intergenic
GAGAGAGAGAAAGAACGATT+GGG 0.546311 7_3:+74627202 None:intergenic
TGCTCGAGCTGTTACAAATG+AGG 0.547895 7_3:-74623588 Msa1123660:five_prime_UTR
TGGATGCTCAACCATGTGAA+GGG 0.548561 7_3:+74624483 None:intergenic
TATGCCGGTGTTAGTGGCAG+AGG 0.549555 7_3:+74623344 None:intergenic
GCAGGAGGGTATAAACTGAC+AGG 0.553635 7_3:-74625974 Msa1123660:intron
AAACGACGTTATAGAACTGC+TGG 0.553739 7_3:-74624580 Msa1123660:five_prime_UTR
GCAGAGTCAGAATCAGGGTA+TGG 0.555458 7_3:+74624202 None:intergenic
TTTCGGAGTTAGCCAACTGA+TGG 0.556659 7_3:+74625070 None:intergenic
GTTGTCGTCATGAGATTGCT+AGG 0.559521 7_3:-74624528 Msa1123660:five_prime_UTR
CAACGACGTGGTCGATTCTG+AGG 0.559930 7_3:-74625769 Msa1123660:five_prime_UTR
TTTGGACCATCATGAGGCAC+TGG 0.560763 7_3:-74625097 Msa1123660:five_prime_UTR
AATGTGCCGTTTAAGGTGGC+TGG 0.561742 7_3:+74624711 None:intergenic
AGGCATTGTCAATAAAATAC+GGG 0.562489 7_3:-74623960 Msa1123660:five_prime_UTR
AAGAATCCACTTATCTTCGA+TGG 0.563589 7_3:-74624055 Msa1123660:five_prime_UTR
TACACTTGTACCCAGTATGT+TGG 0.565021 7_3:-74622877 Msa1123660:intron
GGCGATCCAGAATCAGGAAG+TGG 0.565225 7_3:+74625216 None:intergenic
CTAAACTACGCAGAAGAGCT+GGG 0.566020 7_3:+74624674 None:intergenic
TGAAAGAATGTAATAGCAGT+GGG 0.566230 7_3:+74623638 None:intergenic
AAATTTGAGGTGGCAATCAG+TGG 0.567419 7_3:-74622651 Msa1123660:CDS
TGGAATACACAATATGTCTC+GGG 0.568137 7_3:+74623082 None:intergenic
AGCTACTTCACCTTCTTCAA+GGG 0.568719 7_3:+74625944 None:intergenic
ATGATGGTCCAAATGACTGT+TGG 0.569458 7_3:+74625107 None:intergenic
AATGTCAGACCAACACGTCC+CGG 0.570053 7_3:+74624331 None:intergenic
TTCCTTGCGTCCGGAGACAG+TGG 0.570149 7_3:-74622994 Msa1123660:five_prime_UTR
CCTTAAACGGCACATTGCAA+AGG 0.570466 7_3:-74624704 Msa1123660:five_prime_UTR
GGGACGTGTTGGTCTGACAT+TGG 0.572050 7_3:-74624329 Msa1123660:five_prime_UTR
TACATGACTACATCGTTGTT+AGG 0.574408 7_3:+74625408 None:intergenic
TATCCTTCTTCTGCATATGC+CGG 0.574601 7_3:+74623329 None:intergenic
AGACACAGCCAAGTAAGAAG+AGG 0.574704 7_3:-74624858 Msa1123660:five_prime_UTR
GGAGTTAGCCAACTGATGGT+TGG 0.576091 7_3:+74625074 None:intergenic
GGTTGGCCAGTGCCTCATGA+TGG 0.577183 7_3:+74625091 None:intergenic
GAAGTGTTTCACTATTCCCC+AGG 0.577656 7_3:+74624998 None:intergenic
ACACCGGCATATGCAGAAGA+AGG 0.577680 7_3:-74623332 Msa1123660:five_prime_UTR
GAGACTTCTCAATGTTGTGA+TGG 0.579148 7_3:-74624227 Msa1123660:five_prime_UTR
GGAAGCAATATAAAGATGGA+AGG 0.582675 7_3:-74623302 Msa1123660:five_prime_UTR
AATGATGACTCACTATGACC+TGG 0.583281 7_3:-74625016 Msa1123660:five_prime_UTR
CTGGATGCTCAACCATGTGA+AGG 0.584734 7_3:+74624482 None:intergenic
GCACCACTTCCCCTTGAACG+CGG 0.586425 7_3:+74624625 None:intergenic
TACTCTTGCAAGTGATTGTG+GGG 0.586752 7_3:+74625141 None:intergenic
AGGATGGCTACCCTTGAAGA+AGG 0.589103 7_3:-74625954 Msa1123660:five_prime_UTR
GATGAATTACCGGGACGTGT+TGG 0.589739 7_3:-74624340 Msa1123660:five_prime_UTR
ACCACTTCCCCTTGAACGCG+GGG 0.590385 7_3:+74624627 None:intergenic
TTTCCAGTCTTGAATAGATG+GGG 0.595690 7_3:+74623733 None:intergenic
ATTTCTGATTGGAATTTGGA+AGG 0.597326 7_3:-74624154 Msa1123660:five_prime_UTR
GGCAACACTTGACACGCCGA+TGG 0.599069 7_3:-74625844 Msa1123660:five_prime_UTR
ATGTAGAAGGGCATGTTGCA+AGG 0.599805 7_3:-74624782 Msa1123660:five_prime_UTR
GGTGCCGGAAGCGAGATCTA+GGG 0.600559 7_3:+74627119 None:intergenic
GGTTGCGGCTTCTGAACTGA+AGG 0.600921 7_3:-74623801 Msa1123660:five_prime_UTR
GGCACTGGCCAACCATCAGT+TGG 0.601123 7_3:-74625082 Msa1123660:five_prime_UTR
TTATCAAAGATAGAGTCAGA+AGG 0.601438 7_3:+74623047 None:intergenic
TCATATACCCCGCGTTCAAG+GGG 0.602278 7_3:-74624634 Msa1123660:five_prime_UTR
AACGAACCCGATAAGATCTA+GGG 0.603881 7_3:+74627170 None:intergenic
GTACCCCACACTCTCCAAGA+TGG 0.606832 7_3:-74623105 Msa1123660:five_prime_UTR
CGGTGTTAGTGGCAGAGGAA+GGG 0.608414 7_3:+74623349 None:intergenic
AGATCCTCTGCACATACTTG+AGG 0.610260 7_3:-74623703 Msa1123660:five_prime_UTR
TTGGTCTGACATTGGATATG+TGG 0.610489 7_3:-74624321 Msa1123660:five_prime_UTR
GTGAAACACTTCACGACAGT+CGG 0.610653 7_3:-74624987 Msa1123660:five_prime_UTR
ACCACATTGCAATGATGAAG+TGG 0.611959 7_3:-74625580 Msa1123660:five_prime_UTR
TTCTCAAGCACACTATGAGA+TGG 0.612569 7_3:-74624956 Msa1123660:five_prime_UTR
TTAGTAAGGTCGCTAATGAA+GGG 0.612882 7_3:+74623563 None:intergenic
AATTTGGTCCAATTAATACC+GGG 0.612904 7_3:-74627237 Msa1123660:five_prime_UTR
CCTTCCTCTGCCACTAACAC+CGG 0.618365 7_3:-74623348 Msa1123660:five_prime_UTR
GAATCAGGAAGTGGTTCAGG+TGG 0.620517 7_3:+74625225 None:intergenic
GGAAGCTTGGAACCGTGCTG+CGG 0.621705 7_3:+74627095 None:intergenic
CTTACTTGGCTGTGTCTCTG+GGG 0.622580 7_3:+74624864 None:intergenic
TTGCAATGTGCCGTTTAAGG+TGG 0.623373 7_3:+74624707 None:intergenic
TGGACCTCAAGTCAATCTGT+AGG 0.630778 7_3:-74624301 Msa1123660:five_prime_UTR
GGATGCTCAACCATGTGAAG+GGG 0.631155 7_3:+74624484 None:intergenic
AGCACAGCCCAGCAGTGAGG+TGG 0.632849 7_3:-74625547 Msa1123660:five_prime_UTR
TGAGAGCAGAGTCAGAATCA+GGG 0.633209 7_3:+74624197 None:intergenic
CATTTACTATTTCATAGCTG+GGG 0.633853 7_3:+74624917 None:intergenic
CTTGCGTCCGGAGACAGTGG+AGG 0.634824 7_3:-74622991 Msa1123660:five_prime_UTR
GGATTCTTCACAGAGAGTAG+AGG 0.636348 7_3:+74624070 None:intergenic
GAGGGTATAAACTGACAGGA+TGG 0.636566 7_3:-74625970 Msa1123660:five_prime_UTR
TGAATTAGCCAATTTAACAG+TGG 0.636617 7_3:-74625334 Msa1123660:five_prime_UTR
ATTGGGCTTTGAAACGAACC+CGG 0.637184 7_3:+74627219 None:intergenic
CGGACAATAGTCTCATCAGT+GGG 0.637526 7_3:+74625639 None:intergenic
GTAGAACCTACCAACATACT+GGG 0.638697 7_3:+74622867 None:intergenic
GCCCACTAACTCTGAACCTG+TGG 0.638843 7_3:-74625196 Msa1123660:five_prime_UTR
CAGTCATTTGGACCATCATG+AGG 0.639756 7_3:-74625103 Msa1123660:five_prime_UTR
TCTGCAACCTCGGTTCAACA+TGG 0.640956 7_3:-74624437 Msa1123660:five_prime_UTR
TGCATGACAGACTCAGTGCT+GGG 0.641522 7_3:+74625474 None:intergenic
AGTCTGTCATGCATGAAGCA+GGG 0.641730 7_3:-74625464 Msa1123660:five_prime_UTR
GGCACAAATCAGCAATGATG+TGG 0.644274 7_3:-74625382 Msa1123660:five_prime_UTR
ATGTTTGCTGCATCATAAAG+GGG 0.644876 7_3:+74623680 None:intergenic
TTGTGTCGCAACTTACCTGA+CGG 0.645729 7_3:-74624389 Msa1123660:five_prime_UTR
GGTTAGCCCTGAATGTAGAA+GGG 0.648139 7_3:-74624794 Msa1123660:five_prime_UTR
GTTGCTGAGTGGTGCCTCAG+GGG 0.658032 7_3:+74625788 None:intergenic
GCCACAGGTTCAGAGTTAGT+GGG 0.658075 7_3:+74625195 None:intergenic
GGGCCATCTTGGAGAGTGTG+GGG 0.658293 7_3:+74623102 None:intergenic
GATGCTCAACCATGTGAAGG+GGG 0.658296 7_3:+74624485 None:intergenic
GAATCAGCGTAAATTTGAGG+TGG 0.665261 7_3:-74622661 Msa1123660:CDS
AAATGCAGACAGATACAGCA+TGG 0.665432 7_3:+74624173 None:intergenic
ACTTCTGATCCTGATTACAA+AGG 0.667473 7_3:-74623758 Msa1123660:five_prime_UTR
AAAACAGCACAACAATGAGA+GGG 0.668751 7_3:-74625682 Msa1123660:five_prime_UTR
GGCATCACCAAACAATGGTG+TGG 0.673321 7_3:-74625748 Msa1123660:five_prime_UTR
CTCACATCAGAGCAATGAGG+TGG 0.675090 7_3:-74625514 Msa1123660:five_prime_UTR
GATTTGTTGAGCTCAACACA+AGG 0.678502 7_3:-74623980 Msa1123660:five_prime_UTR
TCGACCACGTCGTTGCTGAG+TGG 0.678710 7_3:+74625777 None:intergenic
AGCAGAGCACAACAATGAGG+AGG 0.679176 7_3:-74625613 Msa1123660:five_prime_UTR
GCCACTTCATCATTGCAATG+TGG 0.681169 7_3:+74625579 None:intergenic
TGATGACTCACTATGACCTG+GGG 0.681855 7_3:-74625014 Msa1123660:five_prime_UTR
ACCAGCTTCATCTTGAAACG+AGG 0.681908 7_3:+74623467 None:intergenic
AAGGTCACCATGTTGAACCG+AGG 0.682871 7_3:+74624430 None:intergenic
TGAAGCAGAGCACAACAATG+AGG 0.683065 7_3:-74625616 Msa1123660:five_prime_UTR
GGCACCACTCAGCAACGACG+TGG 0.686707 7_3:-74625781 Msa1123660:five_prime_UTR
TCTGAGGCATCACCAAACAA+TGG 0.686789 7_3:-74625753 Msa1123660:five_prime_UTR
CAACGATGTAGTCATGTACG+AGG 0.687852 7_3:-74625403 Msa1123660:five_prime_UTR
GGGGCCTCAAGTATGTGCAG+AGG 0.691005 7_3:+74623699 None:intergenic
ATAACCTACAGATTGACTTG+AGG 0.692419 7_3:+74624297 None:intergenic
ACGGACAATAGTCTCATCAG+TGG 0.700131 7_3:+74625638 None:intergenic
TGACTCACATCAGAGCAATG+AGG 0.706489 7_3:-74625517 Msa1123660:five_prime_UTR
TTTCACCAAAATATACGGTG+AGG 0.714858 7_3:-74623435 Msa1123660:five_prime_UTR
AATGCAGACAAGTAATGATG+TGG 0.715499 7_3:-74625715 Msa1123660:five_prime_UTR
GAAGACTTCAGAATCACATG+AGG 0.716904 7_3:-74623921 Msa1123660:five_prime_UTR
TGAAGCACAGCCCAGCAGTG+AGG 0.717469 7_3:-74625550 Msa1123660:five_prime_UTR
GACTTGTATTAGGAAAAGGT+AGG 0.730736 7_3:+74622718 None:intergenic
AACAAACTTAAGGAGCACGT+CGG 0.734478 7_3:+74620637 None:intergenic
ATCCAATTAGCTGCACAACG+AGG 0.753319 7_3:+74622696 None:intergenic
TGACAAGAAGTCTACCCCTG+AGG 0.756791 7_3:-74625802 Msa1123660:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTATAAAATAAGATAATA+TGG + chr7_3:74626506-74626525 None:intergenic 10.0%
!! GTCAAAAAAAAAAAAAAAAG+AGG + chr7_3:74621276-74621295 None:intergenic 15.0%
!! GTTAATTAATTACATAAACA+TGG + chr7_3:74621457-74621476 None:intergenic 15.0%
!! CATGGTTTATTTAAATTAAT+AGG - chr7_3:74621673-74621692 Msa1123660:intron 15.0%
!! AGAAACAAATTATTACATAA+TGG + chr7_3:74621887-74621906 None:intergenic 15.0%
!! ATTCATCAAAATATTTCATA+AGG + chr7_3:74623538-74623557 None:intergenic 15.0%
!!! TTTACTTTTAATTTCCTTTT+AGG - chr7_3:74625052-74625071 Msa1123660:five_prime_UTR 15.0%
!! ACCAAATAAAAAAAAAACAA+TGG + chr7_3:74625513-74625532 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr7_3:74626622-74626641 Msa1123660:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr7_3:74626623-74626642 Msa1123660:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr7_3:74626685-74626704 Msa1123660:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr7_3:74626686-74626705 Msa1123660:intron 15.0%
!!! ATGTAATAATTTGTTTCTTC+TGG - chr7_3:74621889-74621908 Msa1123660:intron 20.0%
!!! TGTAATAATTTGTTTCTTCT+GGG - chr7_3:74621890-74621909 Msa1123660:intron 20.0%
!! ATTATCAAGTATTTCTTGAT+GGG + chr7_3:74622601-74622620 None:intergenic 20.0%
!! TCTTGATCAATAATTATGTA+AGG + chr7_3:74623341-74623360 None:intergenic 20.0%
!!! GAAATATTTTGATGAATTAC+CGG - chr7_3:74623541-74623560 Msa1123660:five_prime_UTR 20.0%
!!! AAATATTTTGATGAATTACC+GGG - chr7_3:74623542-74623561 Msa1123660:five_prime_UTR 20.0%
!!! TTATCAATTTTTTCATGCAT+AGG + chr7_3:74624355-74624374 None:intergenic 20.0%
!! ATGAAAAAATTGATAAGTAC+TGG - chr7_3:74624359-74624378 Msa1123660:five_prime_UTR 20.0%
!!! ACAATGTTGATTTTTTTAGT+TGG + chr7_3:74625277-74625296 None:intergenic 20.0%
!!! GCCATTGTTTTTTTTTTATT+TGG - chr7_3:74625509-74625528 Msa1123660:five_prime_UTR 20.0%
!!! TTTTTATTTGGTGATTTTAC+TGG - chr7_3:74625521-74625540 Msa1123660:five_prime_UTR 20.0%
!!! TTTTATTTGGTGATTTTACT+GGG - chr7_3:74625522-74625541 Msa1123660:five_prime_UTR 20.0%
!! AAAATGTAGAGAAAAATGAA+GGG + chr7_3:74625693-74625712 None:intergenic 20.0%
!! AAAAATGTAGAGAAAAATGA+AGG + chr7_3:74625694-74625713 None:intergenic 20.0%
!!! ACATATAGTTTTGTAACATA+CGG - chr7_3:74626073-74626092 Msa1123660:intron 20.0%
!!! AACTTCTTTAATCGAATTTT+TGG - chr7_3:74626396-74626415 Msa1123660:intron 20.0%
!!! ACTTCTTTAATCGAATTTTT+GGG - chr7_3:74626397-74626416 Msa1123660:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr7_3:74626624-74626643 Msa1123660:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+AGG - chr7_3:74626755-74626774 Msa1123660:intron 20.0%
!!! AATCTATTTTACCAATGTAT+TGG - chr7_3:74627166-74627185 Msa1123660:five_prime_UTR 20.0%
! TATTAATTGGACCAAATTTG+AGG + chr7_3:74620652-74620671 None:intergenic 25.0%
! AAATTTGGTCCAATTAATAC+CGG - chr7_3:74620653-74620672 Msa1123660:CDS 25.0%
! AGATTCTGTTTACTTATATC+TGG - chr7_3:74620854-74620873 Msa1123660:intron 25.0%
! AACTAGTACTTAGATTGAAA+AGG + chr7_3:74621084-74621103 None:intergenic 25.0%
!! TGAGATCGATTTATTATTAC+TGG - chr7_3:74621115-74621134 Msa1123660:intron 25.0%
!! GAGATCGATTTATTATTACT+GGG - chr7_3:74621116-74621135 Msa1123660:intron 25.0%
!! GTTTTTGTTCTTAATGAACT+GGG - chr7_3:74621189-74621208 Msa1123660:intron 25.0%
!! TTACTTTGGTAATATCAACA+AGG + chr7_3:74621379-74621398 None:intergenic 25.0%
! CATGAATTACAACTTTACTT+TGG + chr7_3:74621393-74621412 None:intergenic 25.0%
!!! TTAGCTTGTTTTTTACATCA+GGG + chr7_3:74621978-74621997 None:intergenic 25.0%
!!! TTTAGCTTGTTTTTTACATC+AGG + chr7_3:74621979-74621998 None:intergenic 25.0%
! GATGTAAAAAACAAGCTAAA+CGG - chr7_3:74621979-74621998 Msa1123660:intron 25.0%
! GATTATCAAGTATTTCTTGA+TGG + chr7_3:74622602-74622621 None:intergenic 25.0%
!!! TTTTTTTTCCTCTTCTTACT+TGG + chr7_3:74623044-74623063 None:intergenic 25.0%
! GAAAAAAAAGTCTATAGTCT+GGG - chr7_3:74623055-74623074 Msa1123660:five_prime_UTR 25.0%
! ATCTCCTTGAATAGTATTAA+AGG + chr7_3:74623483-74623502 None:intergenic 25.0%
! TGTAGGTTATGTATTTATCA+CGG - chr7_3:74623607-74623626 Msa1123660:five_prime_UTR 25.0%
!!! AAGGCATTGTCAATAAAATA+CGG - chr7_3:74623930-74623949 Msa1123660:five_prime_UTR 25.0%
! TTGATATGTTGTATTCCATT+TGG + chr7_3:74624065-74624084 None:intergenic 25.0%
! GAATACAACATATCAAATGT+TGG - chr7_3:74624069-74624088 Msa1123660:five_prime_UTR 25.0%
! TTACATTCTTTCATGAAGTT+TGG - chr7_3:74624263-74624282 Msa1123660:five_prime_UTR 25.0%
! TGAAGTTTGGAAATTACATT+TGG - chr7_3:74624276-74624295 Msa1123660:five_prime_UTR 25.0%
! TTCAGTTTCACCAAAATATA+CGG - chr7_3:74624451-74624470 Msa1123660:five_prime_UTR 25.0%
! GTAACATAAGAGTGATTATT+TGG - chr7_3:74625082-74625101 Msa1123660:five_prime_UTR 25.0%
!! AATTTTCTGCAGTTTAAATG+AGG - chr7_3:74625306-74625325 Msa1123660:five_prime_UTR 25.0%
!! ATTTTCTGCAGTTTAAATGA+GGG - chr7_3:74625307-74625326 Msa1123660:five_prime_UTR 25.0%
! TAACTACCAATAAGTGAATA+AGG + chr7_3:74625364-74625383 None:intergenic 25.0%
!!! TATGTTGGTAGTTTTCATAT+AGG - chr7_3:74625382-74625401 Msa1123660:five_prime_UTR 25.0%
!! AATTGCTTAAGCAAAAGTTT+TGG - chr7_3:74625616-74625635 Msa1123660:five_prime_UTR 25.0%
!! TTTTCCACTATTTTACATTG+TGG - chr7_3:74625831-74625850 Msa1123660:five_prime_UTR 25.0%
! AATACCACAATGTAAAATAG+TGG + chr7_3:74625838-74625857 None:intergenic 25.0%
! ATGAAGTATAAACACAGTAA+TGG + chr7_3:74625862-74625881 None:intergenic 25.0%
! AAAAACGAAACTCATAAACA+TGG + chr7_3:74625891-74625910 None:intergenic 25.0%
! CAAAAGAACTCATAAATTTG+TGG + chr7_3:74625995-74626014 None:intergenic 25.0%
!!! AGACTTGAGTTTTAAAATGA+AGG - chr7_3:74626141-74626160 Msa1123660:intron 25.0%
! ATATAGACTTATCTCATACA+CGG - chr7_3:74626195-74626214 Msa1123660:intron 25.0%
! AATGACATTCTTATCTCTTT+GGG - chr7_3:74626243-74626262 Msa1123660:intron 25.0%
!! CTTCTTTAATCGAATTTTTG+GGG - chr7_3:74626398-74626417 Msa1123660:intron 25.0%
!!! TTCTTTAATCGAATTTTTGG+GGG - chr7_3:74626399-74626418 Msa1123660:intron 25.0%
! GTCATGAAGTGTATTAAATT+GGG + chr7_3:74626462-74626481 None:intergenic 25.0%
! TGTCATGAAGTGTATTAAAT+TGG + chr7_3:74626463-74626482 None:intergenic 25.0%
! ATATCGAAAAGAAAATACCA+AGG + chr7_3:74627011-74627030 None:intergenic 25.0%
! TCAATAAGTAATGCATCTAA+AGG - chr7_3:74627087-74627106 Msa1123660:five_prime_UTR 25.0%
! TCTTGAATGAGATACTTATT+AGG + chr7_3:74627147-74627166 None:intergenic 25.0%
! ATATCAACAAACCAATACAT+TGG + chr7_3:74627180-74627199 None:intergenic 25.0%
! TTCTTCTGTTGTTATATCAA+GGG + chr7_3:74627232-74627251 None:intergenic 25.0%
! ATTCTTCTGTTGTTATATCA+AGG + chr7_3:74627233-74627252 None:intergenic 25.0%
AATTTGGTCCAATTAATACC+GGG - chr7_3:74620654-74620673 Msa1123660:CDS 30.0%
! TAATTTTCACGTTTATGCTG+TGG - chr7_3:74620970-74620989 Msa1123660:intron 30.0%
! ACTTCTTCCATTTTACTGTT+GGG - chr7_3:74621167-74621186 Msa1123660:intron 30.0%
ACAAAAACCCAACAGTAAAA+TGG + chr7_3:74621177-74621196 None:intergenic 30.0%
! GGTTTTTGTTCTTAATGAAC+TGG - chr7_3:74621188-74621207 Msa1123660:intron 30.0%
AATTCTGATGCGTAACATTT+GGG - chr7_3:74621327-74621346 Msa1123660:intron 30.0%
CTTCACTAATTAACTTCTCT+TGG + chr7_3:74621511-74621530 None:intergenic 30.0%
!!! AGCCTGTATATTTTTTCATG+TGG - chr7_3:74621830-74621849 Msa1123660:intron 30.0%
!!! GCCTGTATATTTTTTCATGT+GGG - chr7_3:74621831-74621850 Msa1123660:intron 30.0%
!!! CCTGTATATTTTTTCATGTG+GGG - chr7_3:74621832-74621851 Msa1123660:intron 30.0%
!!! TAGCTTGTTTTTTACATCAG+GGG + chr7_3:74621977-74621996 None:intergenic 30.0%
AAGTAATGATGTGGTTGAAT+TGG - chr7_3:74622185-74622204 Msa1123660:intron 30.0%
AAATTGGCTAATTCATTCTC+AGG + chr7_3:74622552-74622571 None:intergenic 30.0%
TGAATTAGCCAATTTAACAG+TGG - chr7_3:74622557-74622576 Msa1123660:intron 30.0%
CATTTACTATTTCATAGCTG+GGG + chr7_3:74622977-74622996 None:intergenic 30.0%
GCATTTACTATTTCATAGCT+GGG + chr7_3:74622978-74622997 None:intergenic 30.0%
AGCATTTACTATTTCATAGC+TGG + chr7_3:74622979-74622998 None:intergenic 30.0%
GGAAAAAAAAGTCTATAGTC+TGG - chr7_3:74623054-74623073 Msa1123660:five_prime_UTR 30.0%
GTGACCTTTAATACTATTCA+AGG - chr7_3:74623476-74623495 Msa1123660:five_prime_UTR 30.0%
GTAGGTTATGTATTTATCAC+GGG - chr7_3:74623608-74623627 Msa1123660:five_prime_UTR 30.0%
!!! GACATTTTGTTGATAGTGAT+TGG - chr7_3:74623630-74623649 Msa1123660:five_prime_UTR 30.0%
ATTTCTGATTGGAATTTGGA+AGG - chr7_3:74623737-74623756 Msa1123660:five_prime_UTR 30.0%
ATGCAACATTGCTTAAAGTA+CGG + chr7_3:74623889-74623908 None:intergenic 30.0%
! AGGCATTGTCAATAAAATAC+GGG - chr7_3:74623931-74623950 Msa1123660:five_prime_UTR 30.0%
! ATAAAAAGGCTCTTTTCACT+GGG + chr7_3:74624031-74624050 None:intergenic 30.0%
! AATAAAAAGGCTCTTTTCAC+TGG + chr7_3:74624032-74624051 None:intergenic 30.0%
!! TGGTTTGGTCATCAATAAAA+AGG + chr7_3:74624045-74624064 None:intergenic 30.0%
! TTATTGATGACCAAACCAAA+TGG - chr7_3:74624047-74624066 Msa1123660:five_prime_UTR 30.0%
ATGTTGTATTCCATTTGGTT+TGG + chr7_3:74624060-74624079 None:intergenic 30.0%
! AACATATCAAATGTTGGTTG+CGG - chr7_3:74624075-74624094 Msa1123660:five_prime_UTR 30.0%
! AATGTTTGCTGCATCATAAA+GGG + chr7_3:74624215-74624234 None:intergenic 30.0%
TGAAAGAATGTAATAGCAGT+GGG + chr7_3:74624256-74624275 None:intergenic 30.0%
ATGAAAGAATGTAATAGCAG+TGG + chr7_3:74624257-74624276 None:intergenic 30.0%
TTTCATGCATAGGTTTAGTA+AGG + chr7_3:74624345-74624364 None:intergenic 30.0%
! TATGTCAAGATTGTTGATGA+TGG - chr7_3:74624490-74624509 Msa1123660:five_prime_UTR 30.0%
TTATCAAAGATAGAGTCAGA+AGG + chr7_3:74624847-74624866 None:intergenic 30.0%
TGATAAAAAGAGCAAAGAGA+TGG - chr7_3:74624861-74624880 Msa1123660:five_prime_UTR 30.0%
GTTCTAGCATCTAAAAGAAA+AGG + chr7_3:74625141-74625160 None:intergenic 30.0%
! TTTCTTTTAGATGCTAGAAC+TGG - chr7_3:74625141-74625160 Msa1123660:five_prime_UTR 30.0%
TCTCATCCTTATTCACTTAT+TGG - chr7_3:74625355-74625374 Msa1123660:five_prime_UTR 30.0%
! TCACTTATTGGTAGTTATGT+TGG - chr7_3:74625367-74625386 Msa1123660:five_prime_UTR 30.0%
!! CCTTTTTAAGCATGAAGTTT+CGG - chr7_3:74625727-74625746 Msa1123660:five_prime_UTR 30.0%
GAATGACATTCTTATCTCTT+TGG - chr7_3:74626242-74626261 Msa1123660:intron 30.0%
! TATCTCTTTGGGTTAAAAGA+AGG - chr7_3:74626254-74626273 Msa1123660:intron 30.0%
TAAGAACAACCTTACATGTA+AGG - chr7_3:74626316-74626335 Msa1123660:intron 30.0%
GATCATAAACCTTACATGTA+AGG + chr7_3:74626328-74626347 None:intergenic 30.0%
AAGTTAAACAGATGACAATG+TGG + chr7_3:74626381-74626400 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr7_3:74626631-74626650 Msa1123660:intron 30.0%
TTGAAATGAGTCAGTTATTC+TGG - chr7_3:74626732-74626751 Msa1123660:intron 30.0%
TGAAATGAGTCAGTTATTCT+GGG - chr7_3:74626733-74626752 Msa1123660:intron 30.0%
AGAAAATAGGTCAGTTATTC+CGG - chr7_3:74626768-74626787 Msa1123660:intron 30.0%
AATGTACAAGTCTATAGTCA+GGG - chr7_3:74626823-74626842 Msa1123660:intron 30.0%
AAAAGAAAATACCAAGGAGA+AGG + chr7_3:74627005-74627024 None:intergenic 30.0%
TGAAAAGCCCTAGATCTTAT+CGG - chr7_3:74620714-74620733 Msa1123660:intron 35.0%
GAATCTGAATGTGAAAAACG+CGG + chr7_3:74620840-74620859 None:intergenic 35.0%
GAAATTAGTTAGATCGATCG+CGG - chr7_3:74621045-74621064 Msa1123660:intron 35.0%
! TTACTGGGTTTTTCTTGAAG+TGG - chr7_3:74621131-74621150 Msa1123660:intron 35.0%
! GACTTCTTCCATTTTACTGT+TGG - chr7_3:74621166-74621185 Msa1123660:intron 35.0%
CATCAGAATTGGAGTCATTA+AGG + chr7_3:74621317-74621336 None:intergenic 35.0%
CAAATGTTACGCATCAGAAT+TGG + chr7_3:74621328-74621347 None:intergenic 35.0%
CAATTCTGATGCGTAACATT+TGG - chr7_3:74621326-74621345 Msa1123660:intron 35.0%
TATATATGTCGTAGAGTCGT+TGG - chr7_3:74621352-74621371 Msa1123660:intron 35.0%
ATATATGTCGTAGAGTCGTT+GGG - chr7_3:74621353-74621372 Msa1123660:intron 35.0%
ACTAATTAACTTCTCTTGGC+AGG + chr7_3:74621507-74621526 None:intergenic 35.0%
AGTTCTTACTTTCCACTGAT+GGG - chr7_3:74621602-74621621 Msa1123660:intron 35.0%
! TTTGGAAAAGCGTAAAGTGA+GGG + chr7_3:74621635-74621654 None:intergenic 35.0%
!! TTTTGGAAAAGCGTAAAGTG+AGG + chr7_3:74621636-74621655 None:intergenic 35.0%
! CAATTAAAGCAGCACAGTTT+TGG + chr7_3:74621653-74621672 None:intergenic 35.0%
TCCACTTTGTCAAATACTCA+TGG - chr7_3:74621765-74621784 Msa1123660:intron 35.0%
ACCATGAGTATTTGACAAAG+TGG + chr7_3:74621769-74621788 None:intergenic 35.0%
ATACTCATGGTAGTTGAATG+CGG - chr7_3:74621778-74621797 Msa1123660:intron 35.0%
CCCCACATGAAAAAATATAC+AGG + chr7_3:74621835-74621854 None:intergenic 35.0%
!!! GTAGCTTTTGAGTTTTCCAT+CGG + chr7_3:74622066-74622085 None:intergenic 35.0%
AATGCAGACAAGTAATGATG+TGG - chr7_3:74622176-74622195 Msa1123660:intron 35.0%
AAAAACAGCACAACAATGAG+AGG - chr7_3:74622208-74622227 Msa1123660:intron 35.0%
AAAACAGCACAACAATGAGA+GGG - chr7_3:74622209-74622228 Msa1123660:intron 35.0%
TACATGACTACATCGTTGTT+AGG + chr7_3:74622486-74622505 None:intergenic 35.0%
TCGTATGGAGATTATCAAAC+TGG + chr7_3:74622626-74622645 None:intergenic 35.0%
GTAGATATTCAGAAGTCGTA+TGG + chr7_3:74622641-74622660 None:intergenic 35.0%
ATACTCTTGCAAGTGATTGT+GGG + chr7_3:74622754-74622773 None:intergenic 35.0%
TATACTCTTGCAAGTGATTG+TGG + chr7_3:74622755-74622774 None:intergenic 35.0%
GTCATAGTGAGTCATCATTT+GGG + chr7_3:74622874-74622893 None:intergenic 35.0%
GGAACACTTTACCATAGAAA+CGG - chr7_3:74623076-74623095 Msa1123660:five_prime_UTR 35.0%
! GTATATGAAGCATGCTGATT+AGG + chr7_3:74623245-74623264 None:intergenic 35.0%
TGAACAAATGCAACAAATCC+TGG + chr7_3:74623431-74623450 None:intergenic 35.0%
TTGTTCAAAATCTGCAACCT+CGG - chr7_3:74623444-74623463 Msa1123660:five_prime_UTR 35.0%
!! ATAACCTACAGATTGACTTG+AGG + chr7_3:74623597-74623616 None:intergenic 35.0%
TATCTGTCTGCATTTCTGAT+TGG - chr7_3:74623726-74623745 Msa1123660:five_prime_UTR 35.0%
CTGCATTTCTGATTGGAATT+TGG - chr7_3:74623733-74623752 Msa1123660:five_prime_UTR 35.0%
!! TAGAGGTCTGAGATTTTCAA+GGG + chr7_3:74623807-74623826 None:intergenic 35.0%
AAGAATCCACTTATCTTCGA+TGG - chr7_3:74623836-74623855 Msa1123660:five_prime_UTR 35.0%
TGCAACATTGCTTAAAGTAC+GGG + chr7_3:74623888-74623907 None:intergenic 35.0%
ACTTCTGATCCTGATTACAA+AGG - chr7_3:74624133-74624152 Msa1123660:five_prime_UTR 35.0%
TTTCCAGTCTTGAATAGATG+GGG + chr7_3:74624161-74624180 None:intergenic 35.0%
GTTTCCAGTCTTGAATAGAT+GGG + chr7_3:74624162-74624181 None:intergenic 35.0%
AGTTTCCAGTCTTGAATAGA+TGG + chr7_3:74624163-74624182 None:intergenic 35.0%
! ATGTTTGCTGCATCATAAAG+GGG + chr7_3:74624214-74624233 None:intergenic 35.0%
! GAATGTTTGCTGCATCATAA+AGG + chr7_3:74624216-74624235 None:intergenic 35.0%
TTAGTAAGGTCGCTAATGAA+GGG + chr7_3:74624331-74624350 None:intergenic 35.0%
TTTAGTAAGGTCGCTAATGA+AGG + chr7_3:74624332-74624351 None:intergenic 35.0%
! TTTGGTGATTGCTGTAGTTA+TGG - chr7_3:74624399-74624418 Msa1123660:five_prime_UTR 35.0%
TTTCACCAAAATATACGGTG+AGG - chr7_3:74624456-74624475 Msa1123660:five_prime_UTR 35.0%
TGCTGGAAGCAATATAAAGA+TGG - chr7_3:74624585-74624604 Msa1123660:five_prime_UTR 35.0%
GGAAGCAATATAAAGATGGA+AGG - chr7_3:74624589-74624608 Msa1123660:five_prime_UTR 35.0%
ATAAAGATGGAAGGATCTTC+TGG - chr7_3:74624598-74624617 Msa1123660:five_prime_UTR 35.0%
AGACTTTGATGCCTATATCA+TGG - chr7_3:74624651-74624670 Msa1123660:five_prime_UTR 35.0%
GGTAGAAGTTTCCATGATAT+AGG + chr7_3:74624665-74624684 None:intergenic 35.0%
CAATTCAGACTTTGTCTGAT+GGG + chr7_3:74624686-74624705 None:intergenic 35.0%
GTTCCAGACTTTGATGTATT+AGG - chr7_3:74624739-74624758 Msa1123660:five_prime_UTR 35.0%
CAACCTAATACATCAAAGTC+TGG + chr7_3:74624745-74624764 None:intergenic 35.0%
CAGACTTTGATGTATTAGGT+TGG - chr7_3:74624743-74624762 Msa1123660:five_prime_UTR 35.0%
!! ACTTTGATGTATTAGGTTGG+TGG - chr7_3:74624746-74624765 Msa1123660:five_prime_UTR 35.0%
TGGAATACACAATATGTCTC+GGG + chr7_3:74624812-74624831 None:intergenic 35.0%
CTGGAATACACAATATGTCT+CGG + chr7_3:74624813-74624832 None:intergenic 35.0%
ATGTTACAAGAGAGCCTAAA+AGG + chr7_3:74625069-74625088 None:intergenic 35.0%
GACTTGTATTAGGAAAAGGT+AGG + chr7_3:74625176-74625195 None:intergenic 35.0%
!! AAATTTACGCTGATTCCTGA+TGG + chr7_3:74625226-74625245 None:intergenic 35.0%
! GATTGTGATTTTGCACACTT+TGG - chr7_3:74625482-74625501 Msa1123660:five_prime_UTR 35.0%
!!! AAGTTTTGGACAGAGATTTG+AGG - chr7_3:74625630-74625649 Msa1123660:five_prime_UTR 35.0%
CCGAAACTTCATGCTTAAAA+AGG + chr7_3:74625730-74625749 None:intergenic 35.0%
! TTTTGTAACATACGGAGTAC+AGG - chr7_3:74626081-74626100 Msa1123660:intron 35.0%
CTACAACGAAATTAACCAAC+TGG + chr7_3:74626223-74626242 None:intergenic 35.0%
TGTAAGGTTGTTCTTAGCAA+AGG + chr7_3:74626312-74626331 None:intergenic 35.0%
!! GGAGTAGTTTTTCAACTTCA+AGG - chr7_3:74626434-74626453 Msa1123660:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG + chr7_3:74626587-74626606 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG + chr7_3:74626588-74626607 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + chr7_3:74626601-74626620 None:intergenic 35.0%
GAAAATAGGTCAGTTATTCC+GGG - chr7_3:74626769-74626788 Msa1123660:intron 35.0%
GAATGTACAAGTCTATAGTC+AGG - chr7_3:74626822-74626841 Msa1123660:intron 35.0%
TAACTTTCAAATCCCAGCAT+AGG + chr7_3:74626850-74626869 None:intergenic 35.0%
ATGTCTTGAATGACGTTAGT+TGG - chr7_3:74626874-74626893 Msa1123660:intron 35.0%
TGTCTTGAATGACGTTAGTT+GGG - chr7_3:74626875-74626894 Msa1123660:intron 35.0%
! ATACTGTACTTGCTGCTATT+TGG - chr7_3:74626964-74626983 Msa1123660:intron 35.0%
TGATTGTACTTTACGTCTCA+TGG + chr7_3:74627060-74627079 None:intergenic 35.0%
GAAACGAACCCGGTATTAAT+TGG + chr7_3:74620665-74620684 None:intergenic 40.0%
GAGAGAGAGAAAGAACGATT+GGG + chr7_3:74620692-74620711 None:intergenic 40.0%
AGAGAGAGAGAAAGAACGAT+TGG + chr7_3:74620693-74620712 None:intergenic 40.0%
GAAAAGCCCTAGATCTTATC+GGG - chr7_3:74620715-74620734 Msa1123660:intron 40.0%
AACGAACCCGATAAGATCTA+GGG + chr7_3:74620724-74620743 None:intergenic 40.0%
AAACGAACCCGATAAGATCT+AGG + chr7_3:74620725-74620744 None:intergenic 40.0%
! TTTTCCGAGAGAGAGAGATT+GGG + chr7_3:74620752-74620771 None:intergenic 40.0%
ACGATAATTGGGCCTAAGTT+GGG + chr7_3:74621224-74621243 None:intergenic 40.0%
CATGAACCCAGACGATAATT+GGG + chr7_3:74621235-74621254 None:intergenic 40.0%
ATGTTAGTGAGCCTTCTTCA+GGG - chr7_3:74621410-74621429 Msa1123660:intron 40.0%
AGTAAGAACTGTGGAAACTG+TGG + chr7_3:74621592-74621611 None:intergenic 40.0%
TCAGTGGAAAGTAAGAACTG+TGG + chr7_3:74621601-74621620 None:intergenic 40.0%
CAGTTCTTACTTTCCACTGA+TGG - chr7_3:74621601-74621620 Msa1123660:intron 40.0%
!! ACTGTGCTGCTTTAATTGCA+TGG - chr7_3:74621655-74621674 Msa1123660:intron 40.0%
! TTGTTTCTTCTGGGTAAAGC+AGG - chr7_3:74621899-74621918 Msa1123660:intron 40.0%
AGCTACTTCACCTTCTTCAA+GGG + chr7_3:74621950-74621969 None:intergenic 40.0%
TAGCTACTTCACCTTCTTCA+AGG + chr7_3:74621951-74621970 None:intergenic 40.0%
AGTGTTGCCTCCAAATCAAT+TGG + chr7_3:74622036-74622055 None:intergenic 40.0%
GAACTAACCACACCATTGTT+TGG + chr7_3:74622153-74622172 None:intergenic 40.0%
ACCACATTGCAATGATGAAG+TGG - chr7_3:74622311-74622330 Msa1123660:intron 40.0%
GTTGGGATCCACTGTTAAAT+TGG + chr7_3:74622568-74622587 None:intergenic 40.0%
TACTCTTGCAAGTGATTGTG+GGG + chr7_3:74622753-74622772 None:intergenic 40.0%
TACACATCCCAACAGTCATT+TGG - chr7_3:74622776-74622795 Msa1123660:intron 40.0%
TGATGGTCCAAATGACTGTT+GGG + chr7_3:74622786-74622805 None:intergenic 40.0%
ATGATGGTCCAAATGACTGT+TGG + chr7_3:74622787-74622806 None:intergenic 40.0%
GTGAGTCATCATTTGGGAAT+TGG + chr7_3:74622868-74622887 None:intergenic 40.0%
GGTCATAGTGAGTCATCATT+TGG + chr7_3:74622875-74622894 None:intergenic 40.0%
AATGATGACTCACTATGACC+TGG - chr7_3:74622875-74622894 Msa1123660:intron 40.0%
ATGATGACTCACTATGACCT+GGG - chr7_3:74622876-74622895 Msa1123660:intron 40.0%
TTCTCAAGCACACTATGAGA+TGG - chr7_3:74622935-74622954 Msa1123660:five_prime_UTR 40.0%
AACATGCCCTTCTACATTCA+GGG + chr7_3:74623106-74623125 None:intergenic 40.0%
CTTAAACGGCACATTGCAAA+GGG - chr7_3:74623188-74623207 Msa1123660:five_prime_UTR 40.0%
! GCAGTTCTATAACGTCGTTT+TGG + chr7_3:74623311-74623330 None:intergenic 40.0%
AAACGACGTTATAGAACTGC+TGG - chr7_3:74623311-74623330 Msa1123660:five_prime_UTR 40.0%
TTGGTCTGACATTGGATATG+TGG - chr7_3:74623570-74623589 Msa1123660:five_prime_UTR 40.0%
ATAGTGATTGGAAGTTGCAG+AGG - chr7_3:74623642-74623661 Msa1123660:five_prime_UTR 40.0%
GAGACTTCTCAATGTTGTGA+TGG - chr7_3:74623664-74623683 Msa1123660:five_prime_UTR 40.0%
AAATGCAGACAGATACAGCA+TGG + chr7_3:74623721-74623740 None:intergenic 40.0%
CTGATTGGAATTTGGAAGGT+AGG - chr7_3:74623741-74623760 Msa1123660:five_prime_UTR 40.0%
! TCAAGGGCAACTTTAGAAAG+TGG + chr7_3:74623791-74623810 None:intergenic 40.0%
!! GTAGAGGTCTGAGATTTTCA+AGG + chr7_3:74623808-74623827 None:intergenic 40.0%
AACTGACCATCGAAGATAAG+TGG + chr7_3:74623845-74623864 None:intergenic 40.0%
TTCGATGGTCAGTTGCTAAT+TGG - chr7_3:74623851-74623870 Msa1123660:five_prime_UTR 40.0%
!! GATTTGTTGAGCTCAACACA+AGG - chr7_3:74623911-74623930 Msa1123660:five_prime_UTR 40.0%
GAAGACTTCAGAATCACATG+AGG - chr7_3:74623970-74623989 Msa1123660:five_prime_UTR 40.0%
!! AGGATCAGAAGTGTCTAAAC+AGG + chr7_3:74624125-74624144 None:intergenic 40.0%
! AGCATCCTCACCGTATATTT+TGG + chr7_3:74624464-74624483 None:intergenic 40.0%
TATCCTTCTTCTGCATATGC+CGG + chr7_3:74624565-74624584 None:intergenic 40.0%
TATGCAGAAGAAGGATATGC+TGG - chr7_3:74624568-74624587 Msa1123660:five_prime_UTR 40.0%
CCAATTCAGACTTTGTCTGA+TGG + chr7_3:74624687-74624706 None:intergenic 40.0%
CCATCAGACAAAGTCTGAAT+TGG - chr7_3:74624684-74624703 Msa1123660:five_prime_UTR 40.0%
GTCTGAATTGGATCAGTATC+TGG - chr7_3:74624696-74624715 Msa1123660:five_prime_UTR 40.0%
! ACATCAAAGTCTGGAACTCT+AGG + chr7_3:74624736-74624755 None:intergenic 40.0%
TCAGAAGGAACAGTAGAAAC+TGG + chr7_3:74624832-74624851 None:intergenic 40.0%
! GAATTCCATTTTCACAAGCG+CGG + chr7_3:74624977-74624996 None:intergenic 40.0%
TACACTTGTACCCAGTATGT+TGG - chr7_3:74625014-74625033 Msa1123660:five_prime_UTR 40.0%
GTAGAACCTACCAACATACT+GGG + chr7_3:74625027-74625046 None:intergenic 40.0%
AGTAGAACCTACCAACATAC+TGG + chr7_3:74625028-74625047 None:intergenic 40.0%
CGAGGACTTGTATTAGGAAA+AGG + chr7_3:74625180-74625199 None:intergenic 40.0%
! CTAATTGGATTTGCTCCATC+AGG - chr7_3:74625208-74625227 Msa1123660:five_prime_UTR 40.0%
CAGGAATCAGCGTAAATTTG+AGG - chr7_3:74625227-74625246 Msa1123660:five_prime_UTR 40.0%
GAATCAGCGTAAATTTGAGG+TGG - chr7_3:74625230-74625249 Msa1123660:five_prime_UTR 40.0%
! AAATTTGAGGTGGCAATCAG+TGG - chr7_3:74625240-74625259 Msa1123660:five_prime_UTR 40.0%
ATTAGCAGCGAACAAACTCT+TGG + chr7_3:74625445-74625464 None:intergenic 40.0%
! TTTTGGACAGAGATTTGAGG+AGG - chr7_3:74625633-74625652 Msa1123660:five_prime_UTR 40.0%
TTTGGACAGAGATTTGAGGA+GGG - chr7_3:74625634-74625653 Msa1123660:five_prime_UTR 40.0%
CAGTATTAACACTGCATAGC+TGG + chr7_3:74626286-74626305 None:intergenic 40.0%
AATGTGGAGCAAGAGCTTAA+AGG + chr7_3:74626350-74626369 None:intergenic 40.0%
!! TTTTTGGGGGAATTTCCACA+TGG - chr7_3:74626412-74626431 Msa1123660:intron 40.0%
!! TTTTGGGGGAATTTCCACAT+GGG - chr7_3:74626413-74626432 Msa1123660:intron 40.0%
GTTGAAAAACTACTCCCATG+TGG + chr7_3:74626430-74626449 None:intergenic 40.0%
CCGGTTTAATTGACCTACTT+TGG - chr7_3:74626585-74626604 Msa1123660:intron 40.0%
TTGAATGACGTTAGTTGGGA+TGG - chr7_3:74626879-74626898 Msa1123660:intron 40.0%
TTAGTTGGGATGGACGTTAT+TGG - chr7_3:74626889-74626908 Msa1123660:intron 40.0%
TTTATGGAAGTCCTTCTCCT+TGG - chr7_3:74626991-74627010 Msa1123660:intron 40.0%
!! ATTGGGCTTTGAAACGAACC+CGG + chr7_3:74620675-74620694 None:intergenic 45.0%
! GTTTTCCGAGAGAGAGAGAT+TGG + chr7_3:74620753-74620772 None:intergenic 45.0%
AAAACCCTAGATCTCGCTTC+CGG - chr7_3:74620768-74620787 Msa1123660:intron 45.0%
TGAATGTGAAAAACGCGGCA+CGG + chr7_3:74620835-74620854 None:intergenic 45.0%
! CTTGAAGTGGAAGTGTGCTA+TGG - chr7_3:74621144-74621163 Msa1123660:intron 45.0%
GACGATAATTGGGCCTAAGT+TGG + chr7_3:74621225-74621244 None:intergenic 45.0%
ACTTAGGCCCAATTATCGTC+TGG - chr7_3:74621225-74621244 Msa1123660:intron 45.0%
CTTAGGCCCAATTATCGTCT+GGG - chr7_3:74621226-74621245 Msa1123660:intron 45.0%
CCATGAACCCAGACGATAAT+TGG + chr7_3:74621236-74621255 None:intergenic 45.0%
CCAATTATCGTCTGGGTTCA+TGG - chr7_3:74621233-74621252 Msa1123660:intron 45.0%
CATGTTAGTGAGCCTTCTTC+AGG - chr7_3:74621409-74621428 Msa1123660:intron 45.0%
GAGGGATAAATTCCCATCAG+TGG + chr7_3:74621617-74621636 None:intergenic 45.0%
TTTCTTCTGGGTAAAGCAGG+AGG - chr7_3:74621902-74621921 Msa1123660:intron 45.0%
TTCTTCTGGGTAAAGCAGGA+GGG - chr7_3:74621903-74621922 Msa1123660:intron 45.0%
! GAGGGTATAAACTGACAGGA+TGG - chr7_3:74621921-74621940 Msa1123660:intron 45.0%
CTCAACCTAGCAACGACAAT+CGG - chr7_3:74622010-74622029 Msa1123660:intron 45.0%
CGACAATCGGCCAATTGATT+TGG - chr7_3:74622023-74622042 Msa1123660:intron 45.0%
!! CAATCGGCCAATTGATTTGG+AGG - chr7_3:74622026-74622045 Msa1123660:intron 45.0%
! TCTGAGGCATCACCAAACAA+TGG - chr7_3:74622138-74622157 Msa1123660:intron 45.0%
CGGACAATAGTCTCATCAGT+GGG + chr7_3:74622255-74622274 None:intergenic 45.0%
ACGGACAATAGTCTCATCAG+TGG + chr7_3:74622256-74622275 None:intergenic 45.0%
CATTGTTGTGCTCTGCTTCA+CGG + chr7_3:74622275-74622294 None:intergenic 45.0%
TGAAGCAGAGCACAACAATG+AGG - chr7_3:74622275-74622294 Msa1123660:intron 45.0%
GCCACTTCATCATTGCAATG+TGG + chr7_3:74622315-74622334 None:intergenic 45.0%
TGACTCACATCAGAGCAATG+AGG - chr7_3:74622374-74622393 Msa1123660:intron 45.0%
AGTCTGTCATGCATGAAGCA+GGG - chr7_3:74622427-74622446 Msa1123660:intron 45.0%
CAACGATGTAGTCATGTACG+AGG - chr7_3:74622488-74622507 Msa1123660:intron 45.0%
GGCACAAATCAGCAATGATG+TGG - chr7_3:74622509-74622528 Msa1123660:intron 45.0%
TGATGGGAGAGTCGATTGTT+GGG + chr7_3:74622585-74622604 None:intergenic 45.0%
TTGATGGGAGAGTCGATTGT+TGG + chr7_3:74622586-74622605 None:intergenic 45.0%
TGCAAGTGATTGTGGGGTAT+TGG + chr7_3:74622747-74622766 None:intergenic 45.0%
CAGTCATTTGGACCATCATG+AGG - chr7_3:74622788-74622807 Msa1123660:intron 45.0%
TTTCGGAGTTAGCCAACTGA+TGG + chr7_3:74622824-74622843 None:intergenic 45.0%
TGATGACTCACTATGACCTG+GGG - chr7_3:74622877-74622896 Msa1123660:intron 45.0%
! GAAGTGTTTCACTATTCCCC+AGG + chr7_3:74622896-74622915 None:intergenic 45.0%
GTGAAACACTTCACGACAGT+CGG - chr7_3:74622904-74622923 Msa1123660:five_prime_UTR 45.0%
GGGGTATGTTCTTCATTGGT+TGG + chr7_3:74623011-74623030 None:intergenic 45.0%
!! CTCTGGGGTATGTTCTTCAT+TGG + chr7_3:74623015-74623034 None:intergenic 45.0%
TCTTACTTGGCTGTGTCTCT+GGG + chr7_3:74623031-74623050 None:intergenic 45.0%
TTCTTACTTGGCTGTGTCTC+TGG + chr7_3:74623032-74623051 None:intergenic 45.0%
AGACACAGCCAAGTAAGAAG+AGG - chr7_3:74623033-74623052 Msa1123660:five_prime_UTR 45.0%
TTCAGGGCTAACCGTTTCTA+TGG + chr7_3:74623090-74623109 None:intergenic 45.0%
! GGTTAGCCCTGAATGTAGAA+GGG - chr7_3:74623097-74623116 Msa1123660:five_prime_UTR 45.0%
CAACATGCCCTTCTACATTC+AGG + chr7_3:74623107-74623126 None:intergenic 45.0%
! ATGTAGAAGGGCATGTTGCA+AGG - chr7_3:74623109-74623128 Msa1123660:five_prime_UTR 45.0%
! CAAACTTTTGCCTACAGCAC+TGG - chr7_3:74623140-74623159 Msa1123660:five_prime_UTR 45.0%
! AACTTTTGAGCCAGTGCTGT+AGG + chr7_3:74623153-74623172 None:intergenic 45.0%
!! TTGCAATGTGCCGTTTAAGG+TGG + chr7_3:74623187-74623206 None:intergenic 45.0%
!! CCTTTGCAATGTGCCGTTTA+AGG + chr7_3:74623190-74623209 None:intergenic 45.0%
CCTTAAACGGCACATTGCAA+AGG - chr7_3:74623187-74623206 Msa1123660:five_prime_UTR 45.0%
CTAAACTACGCAGAAGAGCT+GGG + chr7_3:74623220-74623239 None:intergenic 45.0%
TCTAAACTACGCAGAAGAGC+TGG + chr7_3:74623221-74623240 None:intergenic 45.0%
TTCATATACCCCGCGTTCAA+GGG - chr7_3:74623256-74623275 Msa1123660:five_prime_UTR 45.0%
GTTGTCGTCATGAGATTGCT+AGG - chr7_3:74623363-74623382 Msa1123660:five_prime_UTR 45.0%
TGGATGCTCAACCATGTGAA+GGG + chr7_3:74623411-74623430 None:intergenic 45.0%
TTGTGTCGCAACTTACCTGA+CGG - chr7_3:74623502-74623521 Msa1123660:five_prime_UTR 45.0%
!!! TAAGGCATTGCTTTTCCGTC+AGG + chr7_3:74623520-74623539 None:intergenic 45.0%
TGGACCTCAAGTCAATCTGT+AGG - chr7_3:74623590-74623609 Msa1123660:five_prime_UTR 45.0%
TGAGAGCAGAGTCAGAATCA+GGG + chr7_3:74623697-74623716 None:intergenic 45.0%
GGATTCTTCACAGAGAGTAG+AGG + chr7_3:74623824-74623843 None:intergenic 45.0%
!! GAAGGTGCTGCTTAAGATTC+AGG + chr7_3:74624003-74624022 None:intergenic 45.0%
GAATCTTAAGCAGCACCTTC+AGG - chr7_3:74624003-74624022 Msa1123660:five_prime_UTR 45.0%
! TCTTTTCACTGGGAACCTGA+AGG + chr7_3:74624021-74624040 None:intergenic 45.0%
GATGGGGTTCCTTTGTAATC+AGG + chr7_3:74624145-74624164 None:intergenic 45.0%
GAACCCCATCTATTCAAGAC+TGG - chr7_3:74624155-74624174 Msa1123660:five_prime_UTR 45.0%
AGATCCTCTGCACATACTTG+AGG - chr7_3:74624188-74624207 Msa1123660:five_prime_UTR 45.0%
TGCTCGAGCTGTTACAAATG+AGG - chr7_3:74624303-74624322 Msa1123660:five_prime_UTR 45.0%
GTACTGGAGAGATTCTAGTC+TGG - chr7_3:74624375-74624394 Msa1123660:five_prime_UTR 45.0%
! GAGAGATTCTAGTCTGGCTT+TGG - chr7_3:74624381-74624400 Msa1123660:five_prime_UTR 45.0%
TCCTCGTTTCAAGATGAAGC+TGG - chr7_3:74624423-74624442 Msa1123660:five_prime_UTR 45.0%
ACCAGCTTCATCTTGAAACG+AGG + chr7_3:74624427-74624446 None:intergenic 45.0%
CACTTGTTTGTGCCAAAGAC+TGG - chr7_3:74624923-74624942 Msa1123660:five_prime_UTR 45.0%
ACCATACTGCATCCAGTCTT+TGG + chr7_3:74624938-74624957 None:intergenic 45.0%
TTTGACCGCGCTTGTGAAAA+TGG - chr7_3:74624969-74624988 Msa1123660:five_prime_UTR 45.0%
CTTGTACCCAGTATGTTGGT+AGG - chr7_3:74625018-74625037 Msa1123660:five_prime_UTR 45.0%
GCACAACGAGGACTTGTATT+AGG + chr7_3:74625186-74625205 None:intergenic 45.0%
ATCCAATTAGCTGCACAACG+AGG + chr7_3:74625198-74625217 None:intergenic 45.0%
! TTTTACTGGGACTGCTTTCC+TGG - chr7_3:74625535-74625554 Msa1123660:five_prime_UTR 45.0%
TTTACTGGGACTGCTTTCCT+GGG - chr7_3:74625536-74625555 Msa1123660:five_prime_UTR 45.0%
CAATGTGGAGCATGACAATG+TGG + chr7_3:74626366-74626385 None:intergenic 45.0%
GTAGGTCAATTAAACCGGGA+CGG + chr7_3:74626583-74626602 None:intergenic 45.0%
ATAGGTCAGTTATTCCGGGA+CGG - chr7_3:74626773-74626792 Msa1123660:intron 45.0%
TATAGTCAGGGACCTATGCT+GGG - chr7_3:74626835-74626854 Msa1123660:intron 45.0%
GGAGAAGGACTTCCATAAAG+CGG + chr7_3:74626990-74627009 None:intergenic 45.0%
!!! TTTATTTATTATTTTACATA+TGG + chr7_3:74625335-74625354 None:intergenic 5.0%
!! TTAAAAAAAAAAAAAAATAC+AGG - chr7_3:74626115-74626134 Msa1123660:intron 5.0%
CAAGCCCAATCTCTCTCTCT+CGG - chr7_3:74620745-74620764 Msa1123660:intron 50.0%
ACATAAGCCAGCCCTGAAGA+AGG + chr7_3:74621424-74621443 None:intergenic 50.0%
! GCAGGAGGGTATAAACTGAC+AGG - chr7_3:74621917-74621936 Msa1123660:intron 50.0%
AGGATGGCTACCCTTGAAGA+AGG - chr7_3:74621937-74621956 Msa1123660:intron 50.0%
ATTGGCCGATTGTCGTTGCT+AGG + chr7_3:74622018-74622037 None:intergenic 50.0%
TGACAAGAAGTCTACCCCTG+AGG - chr7_3:74622089-74622108 Msa1123660:intron 50.0%
GGCATCACCAAACAATGGTG+TGG - chr7_3:74622143-74622162 Msa1123660:intron 50.0%
AGCAGAGCACAACAATGAGG+AGG - chr7_3:74622278-74622297 Msa1123660:intron 50.0%
GACATTACCACCTCACTGCT+GGG + chr7_3:74622354-74622373 None:intergenic 50.0%
AGACATTACCACCTCACTGC+TGG + chr7_3:74622355-74622374 None:intergenic 50.0%
CTCACATCAGAGCAATGAGG+TGG - chr7_3:74622377-74622396 Msa1123660:intron 50.0%
TGCATGACAGACTCAGTGCT+GGG + chr7_3:74622420-74622439 None:intergenic 50.0%
ATGCATGACAGACTCAGTGC+TGG + chr7_3:74622421-74622440 None:intergenic 50.0%
GAGTCTGTCATGCATGAAGC+AGG - chr7_3:74622426-74622445 Msa1123660:intron 50.0%
GAATCAGGAAGTGGTTCAGG+TGG + chr7_3:74622669-74622688 None:intergenic 50.0%
CCAGAATCAGGAAGTGGTTC+AGG + chr7_3:74622672-74622691 None:intergenic 50.0%
CCTGAACCACTTCCTGATTC+TGG - chr7_3:74622669-74622688 Msa1123660:CDS 50.0%
! TTAGTGGGCGATCCAGAATC+AGG + chr7_3:74622684-74622703 None:intergenic 50.0%
GCCACAGGTTCAGAGTTAGT+GGG + chr7_3:74622699-74622718 None:intergenic 50.0%
TGCCACAGGTTCAGAGTTAG+TGG + chr7_3:74622700-74622719 None:intergenic 50.0%
TTTGGACCATCATGAGGCAC+TGG - chr7_3:74622794-74622813 Msa1123660:intron 50.0%
GGAGTTAGCCAACTGATGGT+TGG + chr7_3:74622820-74622839 None:intergenic 50.0%
!! CTGATCAGGCGAGAGTGTTT+CGG + chr7_3:74622841-74622860 None:intergenic 50.0%
! TGGGAATTGGCTAGCTGATC+AGG + chr7_3:74622855-74622874 None:intergenic 50.0%
CTTACTTGGCTGTGTCTCTG+GGG + chr7_3:74623030-74623049 None:intergenic 50.0%
! CGGTTAGCCCTGAATGTAGA+AGG - chr7_3:74623096-74623115 Msa1123660:five_prime_UTR 50.0%
!! AGCACTGGCTCAAAAGTTGC+TGG - chr7_3:74623155-74623174 Msa1123660:five_prime_UTR 50.0%
CTGGTACCAGCCACCTTAAA+CGG - chr7_3:74623174-74623193 Msa1123660:five_prime_UTR 50.0%
!! AATGTGCCGTTTAAGGTGGC+TGG + chr7_3:74623183-74623202 None:intergenic 50.0%
CTTCATATACCCCGCGTTCA+AGG - chr7_3:74623255-74623274 Msa1123660:five_prime_UTR 50.0%
TCATATACCCCGCGTTCAAG+GGG - chr7_3:74623257-74623276 Msa1123660:five_prime_UTR 50.0%
GCATGATTACCCCCTTCACA+TGG - chr7_3:74623397-74623416 Msa1123660:five_prime_UTR 50.0%
GATGCTCAACCATGTGAAGG+GGG + chr7_3:74623409-74623428 None:intergenic 50.0%
GGATGCTCAACCATGTGAAG+GGG + chr7_3:74623410-74623429 None:intergenic 50.0%
CTGGATGCTCAACCATGTGA+AGG + chr7_3:74623412-74623431 None:intergenic 50.0%
CTTCACATGGTTGAGCATCC+AGG - chr7_3:74623410-74623429 Msa1123660:five_prime_UTR 50.0%
TCTGCAACCTCGGTTCAACA+TGG - chr7_3:74623454-74623473 Msa1123660:five_prime_UTR 50.0%
AAGGTCACCATGTTGAACCG+AGG + chr7_3:74623464-74623483 None:intergenic 50.0%
GATGAATTACCGGGACGTGT+TGG - chr7_3:74623551-74623570 Msa1123660:five_prime_UTR 50.0%
AATGTCAGACCAACACGTCC+CGG + chr7_3:74623563-74623582 None:intergenic 50.0%
GCAGAGTCAGAATCAGGGTA+TGG + chr7_3:74623692-74623711 None:intergenic 50.0%
CTGAGAGCAGAGTCAGAATC+AGG + chr7_3:74623698-74623717 None:intergenic 50.0%
! TCTGCATATGCCGGTGTTAG+TGG + chr7_3:74624556-74624575 None:intergenic 50.0%
ACACCGGCATATGCAGAAGA+AGG - chr7_3:74624559-74624578 Msa1123660:five_prime_UTR 50.0%
CAATATGTCTCGGGCCATCT+TGG + chr7_3:74624803-74624822 None:intergenic 50.0%
GTATCGAAGTTCCTTGCGTC+CGG - chr7_3:74624888-74624907 Msa1123660:five_prime_UTR 50.0%
GCCAAAGACTGGATGCAGTA+TGG - chr7_3:74624934-74624953 Msa1123660:five_prime_UTR 50.0%
ACAAGCGCGGTCAAAGATTC+GGG + chr7_3:74624964-74624983 None:intergenic 50.0%
CACAAGCGCGGTCAAAGATT+CGG + chr7_3:74624965-74624984 None:intergenic 50.0%
GTCCTCGTTGTGCAGCTAAT+TGG - chr7_3:74625193-74625212 Msa1123660:five_prime_UTR 50.0%
TTACTGGGACTGCTTTCCTG+GGG - chr7_3:74625537-74625556 Msa1123660:five_prime_UTR 50.0%
!! CTGGGGTGGAGTACTGTTTA+GGG - chr7_3:74625554-74625573 Msa1123660:five_prime_UTR 50.0%
! ATCTCATACACGGTGCCAGT+TGG - chr7_3:74626205-74626224 Msa1123660:intron 50.0%
GTCAATTAAACCGGGACGGA+GGG + chr7_3:74626579-74626598 None:intergenic 50.0%
! ATTTGTTACTCCCTCCGTCC+CGG + chr7_3:74626790-74626809 None:intergenic 50.0%
CTATAGTCAGGGACCTATGC+TGG - chr7_3:74626834-74626853 Msa1123660:intron 50.0%
! GCTGCTATTTGGCCGCTTTA+TGG - chr7_3:74626975-74626994 Msa1123660:intron 50.0%
GGGCCTGTTAGACCCAACTT+AGG - chr7_3:74621209-74621228 Msa1123660:intron 55.0%
! GGGCCTAAGTTGGGTCTAAC+AGG + chr7_3:74621215-74621234 None:intergenic 55.0%
TAGTGAGCCTTCTTCAGGGC+TGG - chr7_3:74621414-74621433 Msa1123660:intron 55.0%
!! TTCAGGGCTGGCTTATGTGC+TGG - chr7_3:74621426-74621445 Msa1123660:intron 55.0%
TTCTCTTGGCAGGCTTGTGC+GGG + chr7_3:74621497-74621516 None:intergenic 55.0%
CTTCTCTTGGCAGGCTTGTG+CGG + chr7_3:74621498-74621517 None:intergenic 55.0%
! CAACGACGTGGTCGATTCTG+AGG - chr7_3:74622122-74622141 Msa1123660:intron 55.0%
TCAGGAAGTGGTTCAGGTGG+AGG + chr7_3:74622666-74622685 None:intergenic 55.0%
GGCGATCCAGAATCAGGAAG+TGG + chr7_3:74622678-74622697 None:intergenic 55.0%
GCCCACTAACTCTGAACCTG+TGG - chr7_3:74622695-74622714 Msa1123660:CDS 55.0%
! GGGACGTGTTGGTCTGACAT+TGG - chr7_3:74623562-74623581 Msa1123660:five_prime_UTR 55.0%
GGTTGCGGCTTCTGAACTGA+AGG - chr7_3:74624090-74624109 Msa1123660:five_prime_UTR 55.0%
! CGGTGTTAGTGGCAGAGGAA+GGG + chr7_3:74624545-74624564 None:intergenic 55.0%
CCTTCCTCTGCCACTAACAC+CGG - chr7_3:74624543-74624562 Msa1123660:five_prime_UTR 55.0%
! TATGCCGGTGTTAGTGGCAG+AGG + chr7_3:74624550-74624569 None:intergenic 55.0%
GTACCCCACACTCTCCAAGA+TGG - chr7_3:74624786-74624805 Msa1123660:five_prime_UTR 55.0%
ACAAGTGCCTCCACTGTCTC+CGG + chr7_3:74624910-74624929 None:intergenic 55.0%
CCTAAACAGTACTCCACCCC+AGG + chr7_3:74625556-74625575 None:intergenic 55.0%
!! CCTGGGGTGGAGTACTGTTT+AGG - chr7_3:74625553-74625572 Msa1123660:five_prime_UTR 55.0%
ACATCATACTCCCTCCGTCC+CGG - chr7_3:74626566-74626585 Msa1123660:intron 55.0%
GGTCAATTAAACCGGGACGG+AGG + chr7_3:74626580-74626599 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr7_3:74626777-74626796 Msa1123660:intron 55.0%
! GGTGCCGGAAGCGAGATCTA+GGG + chr7_3:74620775-74620794 None:intergenic 60.0%
GGAAGCTTGGAACCGTGCTG+CGG + chr7_3:74620799-74620818 None:intergenic 60.0%
CGGTTCCAAGCTTCCGCTTC+CGG - chr7_3:74620804-74620823 Msa1123660:intron 60.0%
GGCAACACTTGACACGCCGA+TGG - chr7_3:74622047-74622066 Msa1123660:intron 60.0%
GTTGCTGAGTGGTGCCTCAG+GGG + chr7_3:74622106-74622125 None:intergenic 60.0%
CGTTGCTGAGTGGTGCCTCA+GGG + chr7_3:74622107-74622126 None:intergenic 60.0%
TCGTTGCTGAGTGGTGCCTC+AGG + chr7_3:74622108-74622127 None:intergenic 60.0%
TCGACCACGTCGTTGCTGAG+TGG + chr7_3:74622117-74622136 None:intergenic 60.0%
GCTGGGCTGTGCTTCAGACA+TGG + chr7_3:74622337-74622356 None:intergenic 60.0%
TGAAGCACAGCCCAGCAGTG+AGG - chr7_3:74622341-74622360 Msa1123660:intron 60.0%
GCGTCATGACTGTCTGCCAC+AGG + chr7_3:74622714-74622733 None:intergenic 60.0%
! GGTTGGCCAGTGCCTCATGA+TGG + chr7_3:74622803-74622822 None:intergenic 60.0%
!! GGCACTGGCCAACCATCAGT+TGG - chr7_3:74622809-74622828 Msa1123660:intron 60.0%
ACCACTTCCCCTTGAACGCG+GGG + chr7_3:74623267-74623286 None:intergenic 60.0%
CACCACTTCCCCTTGAACGC+GGG + chr7_3:74623268-74623287 None:intergenic 60.0%
GCACCACTTCCCCTTGAACG+CGG + chr7_3:74623269-74623288 None:intergenic 60.0%
CGTTCAAGGGGAAGTGGTGC+TGG - chr7_3:74623269-74623288 Msa1123660:five_prime_UTR 60.0%
GGGGCCTCAAGTATGTGCAG+AGG + chr7_3:74624195-74624214 None:intergenic 60.0%
! CCGGTGTTAGTGGCAGAGGA+AGG + chr7_3:74624546-74624565 None:intergenic 60.0%
! GGGCCATCTTGGAGAGTGTG+GGG + chr7_3:74624792-74624811 None:intergenic 60.0%
! CGGGCCATCTTGGAGAGTGT+GGG + chr7_3:74624793-74624812 None:intergenic 60.0%
TCGGGCCATCTTGGAGAGTG+TGG + chr7_3:74624794-74624813 None:intergenic 60.0%
TTCCTTGCGTCCGGAGACAG+TGG - chr7_3:74624897-74624916 Msa1123660:five_prime_UTR 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr7_3:74626776-74626795 Msa1123660:intron 60.0%
! CGGTGCCGGAAGCGAGATCT+AGG + chr7_3:74620776-74620795 None:intergenic 65.0%
AGCTTGGAACCGTGCTGCGG+CGG + chr7_3:74620796-74620815 None:intergenic 65.0%
! CAGTGCCGGAAGCGGAAGCT+TGG + chr7_3:74620812-74620831 None:intergenic 65.0%
AAAACGCGGCACGGCAGTGC+CGG + chr7_3:74620826-74620845 None:intergenic 65.0%
GGCACCACTCAGCAACGACG+TGG - chr7_3:74622110-74622129 Msa1123660:intron 65.0%
AGCACAGCCCAGCAGTGAGG+TGG - chr7_3:74622344-74622363 Msa1123660:intron 65.0%
ACCCCGCGTTCAAGGGGAAG+TGG - chr7_3:74623263-74623282 Msa1123660:five_prime_UTR 65.0%
CTCCACTGTCTCCGGACGCA+AGG + chr7_3:74624902-74624921 None:intergenic 65.0%
CTTGCGTCCGGAGACAGTGG+AGG - chr7_3:74624900-74624919 Msa1123660:five_prime_UTR 65.0%
CTGGGACTGCTTTCCTGGGG+TGG - chr7_3:74625540-74625559 Msa1123660:five_prime_UTR 65.0%
CTTCCGGCACCGCCGCAGCA+CGG - chr7_3:74620784-74620803 Msa1123660:intron 75.0%
GAACCGTGCTGCGGCGGTGC+CGG + chr7_3:74620790-74620809 None:intergenic 75.0%
! CGGCACGGCAGTGCCGGAAG+CGG + chr7_3:74620820-74620839 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 74620644 74627269 74620644 ID=Msa1123660;Name=Msa1123660
chr7_3 mRNA 74620644 74627269 74620644 ID=Msa1123660-mRNA-1;Parent=Msa1123660;Name=Msa1123660-mRNA-1;_AED=0.07;_eAED=0.07;_QI=3341|0.66|0.5|0.75|0.66|0.75|4|0|72
chr7_3 exon 74620644 74620707 74620644 ID=Msa1123660-mRNA-1:exon:19878;Parent=Msa1123660-mRNA-1
chr7_3 exon 74622614 74622762 74622614 ID=Msa1123660-mRNA-1:exon:19877;Parent=Msa1123660-mRNA-1
chr7_3 exon 74622878 74625992 74622878 ID=Msa1123660-mRNA-1:exon:19876;Parent=Msa1123660-mRNA-1
chr7_3 exon 74627038 74627269 74627038 ID=Msa1123660-mRNA-1:exon:19875;Parent=Msa1123660-mRNA-1
chr7_3 five_prime_UTR 74627038 74627269 74627038 ID=Msa1123660-mRNA-1:five_prime_utr;Parent=Msa1123660-mRNA-1
chr7_3 five_prime_UTR 74622884 74625992 74622884 ID=Msa1123660-mRNA-1:five_prime_utr;Parent=Msa1123660-mRNA-1
chr7_3 CDS 74622878 74622883 74622878 ID=Msa1123660-mRNA-1:cds;Parent=Msa1123660-mRNA-1
chr7_3 CDS 74622614 74622762 74622614 ID=Msa1123660-mRNA-1:cds;Parent=Msa1123660-mRNA-1
chr7_3 CDS 74620644 74620707 74620644 ID=Msa1123660-mRNA-1:cds;Parent=Msa1123660-mRNA-1
Gene Sequence

>Msa1123660

ATGTTGATGCTAGAACTGGTAAATAGTTCCTACCTTTTCCTAATACAAGTCCTCGTTGTGCAGCTAATTGGATTTGCTCCATCAGGAATCAGCGTAAATTTGAGGTGGCAATCAGTGGAACAATTTGCTCCAACTAAAAAAATCAACATTGTCTCTAACAGACAACATTTGATACTTTCCCTTGATATAACAACAGAAGAATGCCGACGTGCTCCTTAA
Protein sequence

>Msa1123660

MLMLELVNSSYLFLIQVLVVQLIGFAPSGISVNLRWQSVEQFAPTKKINIVSNRQHLILSLDITTEECRRAP*