AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1316560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316560 MtrunA17_Chr8g0346721 99.174 969 8 0 1 969 1 969 0.0 1974
Msa1316560 MtrunA17_Chr6g0469661 74.829 731 182 2 1 729 1 731 0.0 1078
Msa1316560 MtrunA17_Chr7g0221671 26.587 252 156 8 18 262 13 242 1.64e-13 75.1
Msa1316560 MtrunA17_Chr1g0213861 25.911 247 160 5 18 262 11 236 1.59e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316560 AT2G46520.1 68.557 970 298 3 1 965 1 968 0.0 1410
Msa1316560 AT3G59020.2 26.190 252 159 6 19 265 15 244 7.94e-15 79.7
Msa1316560 AT3G59020.1 26.087 253 160 6 18 265 14 244 9.90e-15 79.7
Msa1316560 AT2G31660.1 27.848 237 141 6 19 246 15 230 4.85e-14 77.4
Msa1316560 AT1G26170.1 21.326 558 337 14 6 511 5 512 3.50e-13 74.7

Find 287 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAATGAGGAGGAGTTTA+AGG 0.075617 8_4:-17030133 Msa1316560:CDS
GATATTCAGTTCACTGTTTC+TGG 0.091376 8_4:-17028621 Msa1316560:CDS
CGCCACCGGGTTTGCATTAA+AGG 0.121487 8_4:+17029732 None:intergenic
TCGGCGTGGCGGCGGGGTTC+AGG 0.167402 8_4:+17030924 None:intergenic
CGCCTTATGTTTCTCACATT+TGG 0.169130 8_4:-17028703 Msa1316560:CDS
TTAATAAACAGTAGTGTATT+TGG 0.208548 8_4:-17026498 None:intergenic
CTTGCTGTGTGGACTTTGTT+AGG 0.222365 8_4:-17030090 Msa1316560:CDS
CAAGGATTGTGCGATATATT+TGG 0.232980 8_4:-17029698 Msa1316560:CDS
CAAGCGGAAATGCAGGAAAT+TGG 0.242407 8_4:+17026754 None:intergenic
CCGAATCTTAAGCTGATTAC+TGG 0.249866 8_4:-17028512 Msa1316560:CDS
TTGTGAGTCTCCAGTACTTC+TGG 0.252989 8_4:-17028444 Msa1316560:CDS
ATCCTGCAGCTTCTGCATCC+TGG 0.258895 8_4:-17028421 Msa1316560:CDS
TGAGAATATTAATCTTTATA+TGG 0.266958 8_4:-17030157 Msa1316560:CDS
TTCTGCATCCTGGGGTAAAA+TGG 0.284025 8_4:-17028411 Msa1316560:CDS
CAGCTTTGTGCACAGTTCCC+TGG 0.284744 8_4:-17028197 Msa1316560:CDS
CGAATTTGCATTGAGGGGTT+GGG 0.285078 8_4:-17029214 Msa1316560:CDS
TTGAGAAGAAAAGAGAAGTT+TGG 0.287920 8_4:+17031039 None:intergenic
TTCAGACTCTGGGAGCTTAA+AGG 0.289130 8_4:+17029306 None:intergenic
GCCTTATGTTTCTCACATTT+GGG 0.308273 8_4:-17028702 Msa1316560:CDS
TGAAGTGCCATTTGGTCTAT+TGG 0.316250 8_4:-17026813 Msa1316560:three_prime_UTR
TCCCCTTGGCTGATCTCATT+TGG 0.319827 8_4:+17028842 None:intergenic
AGAAGCGAGGGCCATGATTT+GGG 0.321584 8_4:+17030627 None:intergenic
TTGCTCTTGTGGATGAGCTT+AGG 0.321661 8_4:-17030191 Msa1316560:CDS
TGAATCATATTGAGTATATT+AGG 0.323794 8_4:-17029885 Msa1316560:CDS
TCCTGCAGCTTCTGCATCCT+GGG 0.325044 8_4:-17028420 Msa1316560:CDS
CCATGGTGAATGTGCGATTA+GGG 0.332349 8_4:+17031009 None:intergenic
TGGCGGCGGGGTTCAGGGAG+AGG 0.333918 8_4:+17030930 None:intergenic
TTCATCAGCATTGAGAAAAC+TGG 0.336053 8_4:+17029343 None:intergenic
AAGAAGCGAGGGCCATGATT+TGG 0.336122 8_4:+17030626 None:intergenic
ATGCAAACCCGGTGGCGAAT+TGG 0.341622 8_4:-17029726 Msa1316560:CDS
AAAAGCGGTTTAAGAGTTTC+CGG 0.343454 8_4:+17030366 None:intergenic
AAGCGGAAATGCAGGAAATT+GGG 0.347791 8_4:+17026755 None:intergenic
AGTCACAGAAATTGTGTTGT+AGG 0.352604 8_4:-17030341 Msa1316560:CDS
GAAGTGCCATTTGGTCTATT+GGG 0.356405 8_4:-17026812 Msa1316560:three_prime_UTR
ATCATGGCCCTCGCTTCTTC+CGG 0.357089 8_4:-17030622 Msa1316560:CDS
GGAAGCATTCGGAGAGGAAT+TGG 0.359953 8_4:+17030967 None:intergenic
GATTGCTTGTGAGTTGCTTA+AGG 0.364735 8_4:-17029824 Msa1316560:CDS
AGCTTTGTGCACAGTTCCCT+GGG 0.366805 8_4:-17028196 Msa1316560:CDS
GTATTGTGACACTTCTTTCT+CGG 0.370722 8_4:-17028382 Msa1316560:CDS
CTACTGACTCAAACAGATAA+TGG 0.371221 8_4:+17029143 None:intergenic
TCGTGACCAGCTTGCGGTTA+CGG 0.373029 8_4:-17030046 Msa1316560:CDS
TCCCGGGGATCATTAATATC+TGG 0.373759 8_4:+17028242 None:intergenic
AAATGTATTATGAGGGTTCT+TGG 0.376293 8_4:-17029265 Msa1316560:CDS
ACCATTGATTGAAGCGTAAT+CGG 0.377577 8_4:+17030563 None:intergenic
TGCTCTTGTGGATGAGCTTA+GGG 0.378445 8_4:-17030190 Msa1316560:CDS
AGAGGATTCGGCGTGGCGGC+GGG 0.379976 8_4:+17030917 None:intergenic
TGAGTATATTAGGAGGGATA+TGG 0.381340 8_4:-17029875 Msa1316560:CDS
TCGAATTTGCATTGAGGGGT+TGG 0.382244 8_4:-17029215 Msa1316560:CDS
AAGGGGATTGCTACGCGTTA+TGG 0.383164 8_4:-17029805 Msa1316560:CDS
GCTTTACTGTCCGCCTTCTC+TGG 0.384838 8_4:+17028660 None:intergenic
TGAAGACTAGCAACAAGTTC+CGG 0.387862 8_4:+17030603 None:intergenic
AGAGCATGAGAGGTACGATT+AGG 0.389704 8_4:+17030715 None:intergenic
AAAATCGCACTAAATATATC+AGG 0.393109 8_4:+17028551 None:intergenic
CAGGGAACTGTGCACAAAGC+TGG 0.393904 8_4:+17028198 None:intergenic
GATTATACCGCAGATTTGTC+AGG 0.398128 8_4:-17029962 Msa1316560:CDS
TGCTGATGGTCTTGCTCTTG+TGG 0.398506 8_4:-17030202 Msa1316560:CDS
CTTGTTGCTAGTCTTCAAAA+AGG 0.400301 8_4:-17030597 Msa1316560:CDS
ATGCAGGAAATTGGGGAAAG+GGG 0.403420 8_4:+17026763 None:intergenic
CGGCGTGGCGGCGGGGTTCA+GGG 0.404169 8_4:+17030925 None:intergenic
CATAGTTTGTTTGCGGCCGA+TGG 0.405046 8_4:-17029985 Msa1316560:CDS
TCCGATTACGCTTCAATCAA+TGG 0.406354 8_4:-17030564 Msa1316560:CDS
GCAAGGAAACGAACCAAATC+AGG 0.407252 8_4:+17029472 None:intergenic
TCCATGGTGAATGTGCGATT+AGG 0.408488 8_4:+17031008 None:intergenic
ATGAATGGATGGGTGAGTTT+AGG 0.409263 8_4:-17030263 Msa1316560:CDS
TGCCCTGGTGCGTCTACTCC+AGG 0.410838 8_4:-17028882 Msa1316560:CDS
GCTTGATTTGAAGTATTGTT+TGG 0.411121 8_4:-17030475 Msa1316560:CDS
ATGTTATGAAATGTATTATG+AGG 0.413049 8_4:-17029273 Msa1316560:CDS
GAGCATGAGAGGTACGATTA+GGG 0.413296 8_4:+17030716 None:intergenic
TTGCTGTGTGGACTTTGTTA+GGG 0.413943 8_4:-17030089 Msa1316560:CDS
GAGAGGATTCGGCGTGGCGG+CGG 0.414397 8_4:+17030916 None:intergenic
TCTGCAATATCTGGCATGTC+AGG 0.421184 8_4:+17028332 None:intergenic
TAAGATTCGGAATCCAGAAC+TGG 0.422640 8_4:+17028525 None:intergenic
TCCTCCCTCAACCTCACATT+CGG 0.426403 8_4:+17029928 None:intergenic
TCAAATATCTGCATGTAGAT+TGG 0.426703 8_4:+17028950 None:intergenic
TCTCTTGAGGGGAGTGCTGA+TGG 0.427391 8_4:-17030216 Msa1316560:CDS
GGCGGAGGAGAGAGAGGATT+CGG 0.429321 8_4:+17030905 None:intergenic
GTTAGGTTGGGAGGAGGCGG+AGG 0.429322 8_4:+17030890 None:intergenic
GAAGTTAGGTTGGGAGGAGG+CGG 0.430922 8_4:+17030887 None:intergenic
GTCAAATATGCCAAGTACTT+TGG 0.431949 8_4:+17028811 None:intergenic
GGAGGAGGCGGAGGAGAGAG+AGG 0.432967 8_4:+17030899 None:intergenic
TGAGAAGAAAAGAGAAGTTT+GGG 0.433876 8_4:+17031040 None:intergenic
AGGACGGCGAGGGCGAAGTT+AGG 0.434374 8_4:+17030873 None:intergenic
CGGCGAGGGCGAAGTTAGGT+TGG 0.440463 8_4:+17030877 None:intergenic
GCTAGTTATCCTTCTCTTGA+GGG 0.441696 8_4:-17030228 Msa1316560:CDS
ATTGCTTGTGAGTTGCTTAA+GGG 0.442178 8_4:-17029823 Msa1316560:CDS
GCTGCAGGATCCAGAAGTAC+TGG 0.443966 8_4:+17028434 None:intergenic
CGTGATTCCCGATGATAGCT+AGG 0.445613 8_4:+17030655 None:intergenic
TCCTTCCAGCATTGTAAAGT+TGG 0.446082 8_4:+17028282 None:intergenic
TTGTCCTTCCAATTCGCCAC+CGG 0.447945 8_4:+17029718 None:intergenic
CATGTGTTTGAAGTGCCATT+TGG 0.453119 8_4:-17026821 Msa1316560:three_prime_UTR
TTAATTCTCAGGATCTGTGC+TGG 0.454020 8_4:-17027047 Msa1316560:intron
GGTTTAAGAGTTTCCGGTGG+TGG 0.454599 8_4:+17030372 None:intergenic
TTCGTCCAACTTTACAATGC+TGG 0.457686 8_4:-17028287 Msa1316560:CDS
AGAGGAATTGGAGAGTTTGT+TGG 0.459131 8_4:+17030979 None:intergenic
GAATTTGCATTGAGGGGTTG+GGG 0.459250 8_4:-17029213 Msa1316560:CDS
TGTCCTTCCAATTCGCCACC+GGG 0.461059 8_4:+17029719 None:intergenic
CCCGATGATAGCTAGGGCTT+CGG 0.461908 8_4:+17030662 None:intergenic
GGGCTTCGGAGAGCTGAGAT+TGG 0.462047 8_4:+17030676 None:intergenic
TTATTTCAAGCCGAGGGAAA+AGG 0.463307 8_4:+17029059 None:intergenic
TACTGATTCTCTTCAGACTC+TGG 0.463688 8_4:+17029295 None:intergenic
CATGCATGCCTTTGAGCAAA+TGG 0.463839 8_4:-17026726 Msa1316560:three_prime_UTR
TAAAATCCCAATAGACCAAA+TGG 0.464525 8_4:+17026806 None:intergenic
AGAGTTTCCGGTGGTGGTGG+CGG 0.465943 8_4:+17030378 None:intergenic
TGCTAGTTATCCTTCTCTTG+AGG 0.466758 8_4:-17030229 Msa1316560:CDS
TTGAGGATCATATGAATGAA+TGG 0.467479 8_4:-17030278 Msa1316560:CDS
AGTTTGTTGGTTCCATTCCA+TGG 0.468298 8_4:+17030992 None:intergenic
CAGGGAGAGGAGAGAGAGTG+TGG 0.469257 8_4:+17030943 None:intergenic
CCAGTAATCAGCTTAAGATT+CGG 0.472206 8_4:+17028512 None:intergenic
TTTCTCGGCAAGAACAAGAC+AGG 0.475623 8_4:-17028367 Msa1316560:CDS
TGTTCATCATAGTTTGTTTG+CGG 0.478214 8_4:-17029992 Msa1316560:CDS
TAGTAAAGGACGAGGGTGGC+AGG 0.478712 8_4:-17029393 Msa1316560:CDS
TGCTCAACAAGCGGAAATGC+AGG 0.478829 8_4:+17026747 None:intergenic
GAGAGTGTGGAGGAAGCATT+CGG 0.480598 8_4:+17030956 None:intergenic
CTCAGGATCTGTGCTGGGAT+GGG 0.485325 8_4:-17027041 Msa1316560:intron
TCTACAAAGAAGGCTGCAAC+CGG 0.487821 8_4:-17029664 Msa1316560:CDS
AGTAGCCGGTCTTGTGAAGC+GGG 0.488425 8_4:-17029125 Msa1316560:CDS
CTCAAACAGATAATGGTTGA+AGG 0.488910 8_4:+17029150 None:intergenic
AACCACTCAAATGTTGCAAA+AGG 0.489513 8_4:+17026991 None:intergenic
AGTGCACCTGCCTTAAGCAT+TGG 0.489711 8_4:+17029553 None:intergenic
GTTGCTCGAATTTGCATTGA+GGG 0.490878 8_4:-17029220 Msa1316560:CDS
AAGCGCAAGTGTTCCTGCCC+TGG 0.493681 8_4:-17028897 Msa1316560:CDS
AAGATCTGTGGAGACATAAC+CGG 0.495143 8_4:+17029645 None:intergenic
TGGAGTAGACGCACCAGGGC+AGG 0.497359 8_4:+17028884 None:intergenic
TTAAGAGTTTCCGGTGGTGG+TGG 0.501267 8_4:+17030375 None:intergenic
AGCAACGCTGTCTGATTCAC+AGG 0.503224 8_4:+17028140 None:intergenic
CTTTGGTCAGTCTATCCCCT+TGG 0.503293 8_4:+17028828 None:intergenic
ATCACGATTTCCCCAAATCA+TGG 0.503511 8_4:-17030638 Msa1316560:CDS
TGGAGACTCACAAATGAGTC+TGG 0.504113 8_4:+17028454 None:intergenic
TAATTCTCAGGATCTGTGCT+GGG 0.504229 8_4:-17027046 Msa1316560:intron
TGCATGTAGATTGGTGGGAT+GGG 0.505019 8_4:+17028959 None:intergenic
CCCAATCCTCGATTCCGAAA+AGG 0.505753 8_4:-17030751 Msa1316560:CDS
GAATGAGTATCCAATGCTTA+AGG 0.506930 8_4:-17029563 Msa1316560:CDS
TCTCAGGATCTGTGCTGGGA+TGG 0.508425 8_4:-17027042 Msa1316560:intron
TGAGAAACTCTTAATAGTAA+AGG 0.508710 8_4:-17029407 Msa1316560:CDS
AGGGAACTGTGCACAAAGCT+GGG 0.510033 8_4:+17028199 None:intergenic
GCATCAAGCACTTCTGATCA+AGG 0.510248 8_4:-17028776 Msa1316560:CDS
GAGGGTGGCAGGCTACGTTA+TGG 0.511357 8_4:-17029382 Msa1316560:CDS
TGTGGATGAGCTTAGGGCTG+CGG 0.511547 8_4:-17030184 Msa1316560:CDS
GCAAGTAACTGAAATGCGTA+TGG 0.512567 8_4:+17029007 None:intergenic
GGCGAGGGCGAAGTTAGGTT+GGG 0.516568 8_4:+17030878 None:intergenic
TGGGATTGAGCATTACTGTC+TGG 0.518638 8_4:-17027022 Msa1316560:three_prime_UTR
AGGCCTGGAGTAGACGCACC+AGG 0.520181 8_4:+17028879 None:intergenic
ACAGATAATGGTTGAAGGTG+GGG 0.520696 8_4:+17029155 None:intergenic
ATGACTTGAGGGAACCTCCC+AGG 0.521093 8_4:+17028179 None:intergenic
TTCCAGATATTAATGATCCC+CGG 0.522021 8_4:-17028244 Msa1316560:CDS
CCAGATATTGCAGAAAATGT+AGG 0.524692 8_4:-17028323 Msa1316560:CDS
AATGCAGGAAATTGGGGAAA+GGG 0.526890 8_4:+17026762 None:intergenic
CATTTGCAGTGATGACTTGA+GGG 0.527183 8_4:+17028168 None:intergenic
CCGAAGCCCTAGCTATCATC+GGG 0.527980 8_4:-17030662 Msa1316560:CDS
CCCCAGGATGCAGAAGCTGC+AGG 0.528376 8_4:+17028419 None:intergenic
TCCGAAGCCCTAGCTATCAT+CGG 0.530404 8_4:-17030663 Msa1316560:CDS
ACAGCAGCCGCCACCACCAC+CGG 0.532576 8_4:-17030385 Msa1316560:CDS
GACGAGACGGAGGACGGCGA+GGG 0.536397 8_4:+17030863 None:intergenic
ACTCCAGGCCTTCCTTCAAA+AGG 0.538342 8_4:-17028867 Msa1316560:CDS
TCACTGTTTCTGGTTAAGCA+TGG 0.538604 8_4:-17028611 Msa1316560:CDS
AACAGATAATGGTTGAAGGT+GGG 0.538694 8_4:+17029154 None:intergenic
GGTCTCTCTTTCTACAAAGA+AGG 0.540099 8_4:-17029674 Msa1316560:CDS
ATAGTTTGTTTGCGGCCGAT+GGG 0.540550 8_4:-17029984 Msa1316560:CDS
TCTTTATATGGAGAAGAATG+AGG 0.540847 8_4:-17030145 Msa1316560:CDS
GATAGACTGACCAAAGTACT+TGG 0.541303 8_4:-17028821 Msa1316560:CDS
AGTTGACGGCAGCGGCTTGA+CGG 0.542493 8_4:+17030814 None:intergenic
CTGCATGTAGATTGGTGGGA+TGG 0.546010 8_4:+17028958 None:intergenic
GCCCAAATGTGAGAAACATA+AGG 0.547648 8_4:+17028701 None:intergenic
AACTAATGCTCGGTTGTAAG+TGG 0.547807 8_4:+17028106 None:intergenic
GGATCATATGAATGAATGGA+TGG 0.549813 8_4:-17030274 Msa1316560:CDS
ATGTAGATTGGTGGGATGGG+TGG 0.550873 8_4:+17028962 None:intergenic
TCCAGATATTAATGATCCCC+GGG 0.552430 8_4:-17028243 Msa1316560:CDS
TCAAATGTTGCAAAAGGCTG+AGG 0.555939 8_4:+17026997 None:intergenic
ACATTTGCAGTGATGACTTG+AGG 0.556182 8_4:+17028167 None:intergenic
TGTTATGAAATGTATTATGA+GGG 0.556990 8_4:-17029272 Msa1316560:CDS
GGTTATCTTCAGCGGACCAA+CGG 0.558438 8_4:+17030772 None:intergenic
AATATCTGCATGTAGATTGG+TGG 0.558745 8_4:+17028953 None:intergenic
TTGCTTGTGAGTTGCTTAAG+GGG 0.562415 8_4:-17029822 Msa1316560:CDS
CAGTAGCCGGTCTTGTGAAG+CGG 0.563321 8_4:-17029126 Msa1316560:CDS
TGATTCCGAATGTGAGGTTG+AGG 0.563458 8_4:-17029933 Msa1316560:CDS
CGGACCAACGGAGACGGAGG+TGG 0.565978 8_4:+17030784 None:intergenic
GGCGAAGTTAGGTTGGGAGG+AGG 0.567027 8_4:+17030884 None:intergenic
ACGGATCTGATCGGAGATGG+AGG 0.567473 8_4:+17030833 None:intergenic
TTGACGGATCTGATCGGAGA+TGG 0.567532 8_4:+17030830 None:intergenic
TGTGAAGCGGGCTTCTGAGA+GGG 0.568121 8_4:-17029113 Msa1316560:CDS
AGCGGAAATGCAGGAAATTG+GGG 0.572270 8_4:+17026756 None:intergenic
ACTGATTCTCTTCAGACTCT+GGG 0.573743 8_4:+17029296 None:intergenic
GAGTATCCAATGCTTAAGGC+AGG 0.575297 8_4:-17029559 Msa1316560:CDS
ATATTTAAGTAAATGTCAGA+AGG 0.575750 8_4:-17026667 Msa1316560:three_prime_UTR
CTAGTTATCCTTCTCTTGAG+GGG 0.575908 8_4:-17030227 Msa1316560:CDS
TATCTGTTTGAGTCAGTAGC+CGG 0.575956 8_4:-17029139 Msa1316560:CDS
ATGAGAATAACAGTAAATCT+CGG 0.576138 8_4:+17026859 None:intergenic
AGAACAAGACAGGGTTGAGG+AGG 0.576975 8_4:-17028357 Msa1316560:CDS
ATTATACCGCAGATTTGTCA+GGG 0.577085 8_4:-17029961 Msa1316560:CDS
TCGCACTAAATATATCAGGC+TGG 0.577096 8_4:+17028555 None:intergenic
GGATTGTGCGATATATTTGG+TGG 0.577400 8_4:-17029695 Msa1316560:CDS
TTCAGCGACGAGACGGAGGA+CGG 0.581545 8_4:+17030857 None:intergenic
TATCAAAAGAAGTAGCATTG+AGG 0.583401 8_4:-17029501 Msa1316560:CDS
ATCGCACATTCACCATGGAA+TGG 0.583806 8_4:-17031004 Msa1316560:exon
AGAAGCCCGCTTCACAAGAC+CGG 0.584077 8_4:+17029120 None:intergenic
ATCATATTGAGTATATTAGG+AGG 0.584593 8_4:-17029882 Msa1316560:CDS
AATTTCTGTGACTCGAAAAG+CGG 0.584834 8_4:+17030351 None:intergenic
GAAGCGAGGGCCATGATTTG+GGG 0.585140 8_4:+17030628 None:intergenic
GACAGTATTATTTCAAGCCG+AGG 0.585780 8_4:+17029052 None:intergenic
AGTGAGTGTGAAATATATAA+CGG 0.586562 8_4:+17031075 None:intergenic
TTTGGTTCGTTTCCTTGCTG+CGG 0.587294 8_4:-17029467 Msa1316560:CDS
CGCGTCGTTGATTGACGCTG+CGG 0.589913 8_4:-17030412 Msa1316560:CDS
GAGGATTCGGCGTGGCGGCG+GGG 0.590284 8_4:+17030918 None:intergenic
CGACGAGACGGAGGACGGCG+AGG 0.590663 8_4:+17030862 None:intergenic
GAGGTTGAGGGAGGATGATG+AGG 0.591211 8_4:-17029920 Msa1316560:CDS
TGCATCCTGGGGTAAAATGG+TGG 0.591851 8_4:-17028408 Msa1316560:CDS
TAATTGCCGTAACCGCAAGC+TGG 0.592087 8_4:+17030040 None:intergenic
TCAGCACTCCCCTCAAGAGA+AGG 0.592983 8_4:+17030219 None:intergenic
GGGATCATTAATATCTGGAA+GGG 0.594843 8_4:+17028247 None:intergenic
AAACAGATAATGGTTGAAGG+TGG 0.595794 8_4:+17029153 None:intergenic
AACTTACTCAAACTAATGCT+CGG 0.596616 8_4:+17028096 None:intergenic
AATCACTACCATTTGCTCAA+AGG 0.597699 8_4:+17026718 None:intergenic
TGACTTGAGGGAACCTCCCA+GGG 0.597802 8_4:+17028180 None:intergenic
AACAAGTTCCGGAAGAAGCG+AGG 0.599510 8_4:+17030614 None:intergenic
GGAGAGGAGAGAGAGTGTGG+AGG 0.600742 8_4:+17030946 None:intergenic
TATTTAAGTAAATGTCAGAA+GGG 0.601539 8_4:-17026666 Msa1316560:three_prime_UTR
AAATGCAGGAAATTGGGGAA+AGG 0.601789 8_4:+17026761 None:intergenic
TGGAGGGTTCAGCGACGAGA+CGG 0.603655 8_4:+17030850 None:intergenic
GGATCATTAATATCTGGAAG+GGG 0.603768 8_4:+17028248 None:intergenic
AAGCTCCTTTAATGCAAACC+CGG 0.603899 8_4:-17029737 Msa1316560:CDS
ACAAGTTCCGGAAGAAGCGA+GGG 0.604193 8_4:+17030615 None:intergenic
CGGATCTGATCGGAGATGGA+GGG 0.605850 8_4:+17030834 None:intergenic
TGCAGGAAATTGGGGAAAGG+GGG 0.607711 8_4:+17026764 None:intergenic
TTAGAGAGCTCCAGAGAAGG+CGG 0.607962 8_4:-17028670 Msa1316560:CDS
TTCTCGGCAAGAACAAGACA+GGG 0.608184 8_4:-17028366 Msa1316560:CDS
TCATATTGAGTATATTAGGA+GGG 0.608345 8_4:-17029881 Msa1316560:CDS
GCACCAAATGAGATCAGCCA+AGG 0.608644 8_4:-17028845 Msa1316560:CDS
AGCGGCTTGACGGATCTGAT+CGG 0.609749 8_4:+17030824 None:intergenic
TATATTAGGAGGGATATGGA+AGG 0.611021 8_4:-17029871 Msa1316560:CDS
CCCTAATCGCACATTCACCA+TGG 0.613496 8_4:-17031009 Msa1316560:exon
TTGGTGGCGGAGAGCATGAG+AGG 0.615233 8_4:+17030705 None:intergenic
AAAACCACCTCCGTCTCCGT+TGG 0.615604 8_4:-17030788 Msa1316560:CDS
TTGTGAAGCGGGCTTCTGAG+AGG 0.615980 8_4:-17029114 Msa1316560:CDS
TGTTGCTCGAATTTGCATTG+AGG 0.616016 8_4:-17029221 Msa1316560:CDS
ACTAAATATATCAGGCTGGA+CGG 0.616909 8_4:+17028559 None:intergenic
ACAGAAGTATACTCGACAGT+AGG 0.618145 8_4:+17026956 None:intergenic
ACTCTTAATAGTAAAGGACG+AGG 0.618274 8_4:-17029401 Msa1316560:CDS
GTGATCTTGATACAAGGAGG+AGG 0.620319 8_4:-17029846 Msa1316560:CDS
GATTCCGAATGTGAGGTTGA+GGG 0.620733 8_4:-17029932 Msa1316560:CDS
ACAGTATTATTTCAAGCCGA+GGG 0.621118 8_4:+17029053 None:intergenic
GTATACTCGACAGTAGGCAG+AGG 0.621319 8_4:+17026962 None:intergenic
CAAGTAACTGAAATGCGTAT+GGG 0.621742 8_4:+17029008 None:intergenic
CTTCAGCGGACCAACGGAGA+CGG 0.622307 8_4:+17030778 None:intergenic
CACCAAATGAGATCAGCCAA+GGG 0.623350 8_4:-17028844 Msa1316560:CDS
ATTGTAAAGTTGGACGAAGG+TGG 0.623656 8_4:+17028292 None:intergenic
ATATCTGCATGTAGATTGGT+GGG 0.627188 8_4:+17028954 None:intergenic
TTGAACATCAACAAGATCTG+TGG 0.627448 8_4:+17029633 None:intergenic
GAGGATTGGGTTATCTTCAG+CGG 0.631308 8_4:+17030764 None:intergenic
TTTGTGCACAGTTCCCTGGG+AGG 0.632283 8_4:-17028193 Msa1316560:CDS
TCCAACTTTACAATGCTGGA+AGG 0.632984 8_4:-17028283 Msa1316560:CDS
AAACCCGGTGGCGAATTGGA+AGG 0.633015 8_4:-17029722 Msa1316560:CDS
CCTGCAGCTTCTGCATCCTG+GGG 0.635126 8_4:-17028419 Msa1316560:CDS
AGGCATGCATGCTCAACAAG+CGG 0.635282 8_4:+17026738 None:intergenic
AAGGTAGTGATCTTGATACA+AGG 0.638914 8_4:-17029852 Msa1316560:CDS
GTGATTCCCGATGATAGCTA+GGG 0.638935 8_4:+17030656 None:intergenic
CAGCGGACCAACGGAGACGG+AGG 0.640762 8_4:+17030781 None:intergenic
GGGGATCATTAATATCTGGA+AGG 0.642825 8_4:+17028246 None:intergenic
GACTAGTCGTGACCAGCTTG+CGG 0.643562 8_4:-17030052 Msa1316560:CDS
AAGATTCGGAATCCAGAACT+GGG 0.643798 8_4:+17028526 None:intergenic
TTGCTCGAATTTGCATTGAG+GGG 0.644156 8_4:-17029219 Msa1316560:CDS
GCAAGAACAAGACAGGGTTG+AGG 0.647585 8_4:-17028360 Msa1316560:CDS
CAACATTTGACTCCGCAGCA+AGG 0.650912 8_4:+17029455 None:intergenic
TTATATGGAGAAGAATGAGG+AGG 0.657740 8_4:-17030142 Msa1316560:CDS
TGAATATCAAGAGAGACTTG+AGG 0.658051 8_4:+17028636 None:intergenic
GATCATATGAATGAATGGAT+GGG 0.659145 8_4:-17030273 Msa1316560:CDS
AATCTGCGGTATAATCCCAT+CGG 0.662771 8_4:+17029969 None:intergenic
AGCATTGTAAAGTTGGACGA+AGG 0.671018 8_4:+17028289 None:intergenic
GGCCTGGAGTAGACGCACCA+GGG 0.671962 8_4:+17028880 None:intergenic
AGGGTTCAGCGACGAGACGG+AGG 0.675337 8_4:+17030853 None:intergenic
AGAGAGAGGATTCGGCGTGG+CGG 0.684559 8_4:+17030913 None:intergenic
TTATACCGCAGATTTGTCAG+GGG 0.685030 8_4:-17029960 Msa1316560:CDS
TGTGGAGGAAGCATTCGGAG+AGG 0.686501 8_4:+17030961 None:intergenic
TTAATAGTAAAGGACGAGGG+TGG 0.686705 8_4:-17029397 Msa1316560:CDS
GGATTGTGATTCCGAATGTG+AGG 0.687428 8_4:-17029939 Msa1316560:CDS
CTCCTTTAATGCAAACCCGG+TGG 0.691872 8_4:-17029734 Msa1316560:CDS
CGCAGCGTCAATCAACGACG+CGG 0.696713 8_4:+17030413 None:intergenic
CCGCCATAAAATCACGACAC+CGG 0.700241 8_4:+17026889 None:intergenic
TCCGAATGTGAGGTTGAGGG+AGG 0.708339 8_4:-17029929 Msa1316560:CDS
GATCATTAATATCTGGAAGG+GGG 0.710644 8_4:+17028249 None:intergenic
ACAATCCCCTGACAAATCTG+CGG 0.710797 8_4:+17029955 None:intergenic
GTAGTGATCTTGATACAAGG+AGG 0.711592 8_4:-17029849 Msa1316560:CDS
CTCTTAATAGTAAAGGACGA+GGG 0.713370 8_4:-17029400 Msa1316560:CDS
ACCAAATGAGATCAGCCAAG+GGG 0.717940 8_4:-17028843 Msa1316560:CDS
GGTGGCGAATTGGAAGGACA+AGG 0.722542 8_4:-17029716 Msa1316560:CDS
AGCGGTTTAAGAGTTTCCGG+TGG 0.723807 8_4:+17030369 None:intergenic
AGGAGAGAGAGGATTCGGCG+TGG 0.725402 8_4:+17030910 None:intergenic
GAGGGCGAAGTTAGGTTGGG+AGG 0.730306 8_4:+17030881 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTTATTTGATTATTA+TGG - chr8_4:17029984-17030003 Msa1316560:CDS 10.0%
!!! TTTTGTCAATTTTAAAAATA+TGG - chr8_4:17030984-17031003 Msa1316560:CDS 10.0%
!! TTAAAAATATGGTTATTATT+TGG - chr8_4:17030995-17031014 Msa1316560:exon 10.0%
!! TAAAAATATGGTTATTATTT+GGG - chr8_4:17030996-17031015 Msa1316560:exon 10.0%
!! TGAGAATATTAATCTTTATA+TGG - chr8_4:17027443-17027462 Msa1316560:intron 15.0%
!! TGTATCTCAAAATATATTAA+GGG + chr8_4:17029601-17029620 None:intergenic 15.0%
!! ATGTATCTCAAAATATATTA+AGG + chr8_4:17029602-17029621 None:intergenic 15.0%
!! AGATATAAATAGACAAAAAA+GGG + chr8_4:17029823-17029842 None:intergenic 15.0%
!! TGAAATTATATAAAGATTGA+TGG + chr8_4:17030204-17030223 None:intergenic 15.0%
!!! AAAAAAATCATGTTACTTTT+AGG - chr8_4:17030487-17030506 Msa1316560:CDS 15.0%
!!! TTTAGTGTAAATTTTTTTCA+TGG - chr8_4:17030813-17030832 Msa1316560:CDS 15.0%
!! AAATTGACAAAAATTAAACA+TGG + chr8_4:17030976-17030995 None:intergenic 15.0%
!! TGAATCATATTGAGTATATT+AGG - chr8_4:17027715-17027734 Msa1316560:intron 20.0%
!! ATGTTATGAAATGTATTATG+AGG - chr8_4:17028327-17028346 Msa1316560:CDS 20.0%
!! TGTTATGAAATGTATTATGA+GGG - chr8_4:17028328-17028347 Msa1316560:CDS 20.0%
!! AATATATTAAGGGTAGATTA+AGG + chr8_4:17029591-17029610 None:intergenic 20.0%
!! GTAATATTTATCTGCTTTAT+TGG - chr8_4:17029757-17029776 Msa1316560:CDS 20.0%
!! CAGATATAAATAGACAAAAA+AGG + chr8_4:17029824-17029843 None:intergenic 20.0%
!!! TTTCCATGTTTCATTTTATA+TGG - chr8_4:17029939-17029958 Msa1316560:CDS 20.0%
!!! TTCCATGTTTCATTTTATAT+GGG - chr8_4:17029940-17029959 Msa1316560:CDS 20.0%
!! AATTTAAATACTAAACATCC+AGG + chr8_4:17030133-17030152 None:intergenic 20.0%
!! CAATCTTTATATAATTTCAC+CGG - chr8_4:17030205-17030224 Msa1316560:CDS 20.0%
!!! TAAACATGTGATTTTTAAAC+AGG - chr8_4:17030522-17030541 Msa1316560:CDS 20.0%
!! ATATTTAAGTAAATGTCAGA+AGG - chr8_4:17030933-17030952 Msa1316560:CDS 20.0%
!! TATTTAAGTAAATGTCAGAA+GGG - chr8_4:17030934-17030953 Msa1316560:CDS 20.0%
!!! TGAATTTTTTTTTGAAGTGA+AGG + chr8_4:17031041-17031060 None:intergenic 20.0%
!!! AACAAATTTTGAGAAAAATG+TGG + chr8_4:17031082-17031101 None:intergenic 20.0%
! AGTGAGTGTGAAATATATAA+CGG + chr8_4:17026528-17026547 None:intergenic 25.0%
! TTTCTTAAAAATCGAATTCG+CGG + chr8_4:17027073-17027092 None:intergenic 25.0%
! ATCATATTGAGTATATTAGG+AGG - chr8_4:17027718-17027737 Msa1316560:intron 25.0%
! TCATATTGAGTATATTAGGA+GGG - chr8_4:17027719-17027738 Msa1316560:intron 25.0%
!!! CTTCTTTTGATATTTGAGAT+CGG + chr8_4:17028091-17028110 None:intergenic 25.0%
! TGAGAAACTCTTAATAGTAA+AGG - chr8_4:17028193-17028212 Msa1316560:CDS 25.0%
! GAAAAATTCAGTTACATCAT+TGG + chr8_4:17028573-17028592 None:intergenic 25.0%
! AAAATCGCACTAAATATATC+AGG + chr8_4:17029052-17029071 None:intergenic 25.0%
! ATGAAGAAACAAAAAATTCC+CGG + chr8_4:17029378-17029397 None:intergenic 25.0%
!!! GGAATTTTTTGTTTCTTCAT+TGG - chr8_4:17029378-17029397 Msa1316560:CDS 25.0%
! ATGCAGAATAAAATAACAAC+TGG + chr8_4:17029647-17029666 None:intergenic 25.0%
! AACGATATATAAAGCTTGAT+TGG + chr8_4:17029696-17029715 None:intergenic 25.0%
!! TCCATGTTTCATTTTATATG+GGG - chr8_4:17029941-17029960 Msa1316560:CDS 25.0%
!!! TGTGTGATTAAGTTTTTTCT+TGG - chr8_4:17030267-17030286 Msa1316560:CDS 25.0%
!!! TGATTAAGTTTTTTCTTGGT+TGG - chr8_4:17030271-17030290 Msa1316560:CDS 25.0%
! GAGAAAGATAATAAACTGTT+TGG - chr8_4:17030298-17030317 Msa1316560:CDS 25.0%
!!! AGGCATTTATTTTAATTCTC+AGG - chr8_4:17030542-17030561 Msa1316560:CDS 25.0%
!! AATTATCATCCAATTTTTGC+CGG - chr8_4:17030692-17030711 Msa1316560:CDS 25.0%
! ATGAGAATAACAGTAAATCT+CGG + chr8_4:17030744-17030763 None:intergenic 25.0%
!! ATTCTCATTTTGAATTCTGT+AGG - chr8_4:17030756-17030775 Msa1316560:CDS 25.0%
! AGAAGTTTGGGTTTGAAAAA+TGG + chr8_4:17026551-17026570 None:intergenic 30.0%
TGAGAAGAAAAGAGAAGTTT+GGG + chr8_4:17026563-17026582 None:intergenic 30.0%
TTGAGAAGAAAAGAGAAGTT+TGG + chr8_4:17026564-17026583 None:intergenic 30.0%
!!! GGTTTTGATTTGTTCCTTTT+CGG + chr8_4:17026866-17026885 None:intergenic 30.0%
!! GCTTGATTTGAAGTATTGTT+TGG - chr8_4:17027125-17027144 Msa1316560:intron 30.0%
TTGAGAAAAATCTCAAGCAA+AGG + chr8_4:17027165-17027184 None:intergenic 30.0%
ATATGATCCTCAAAAAACTC+AGG + chr8_4:17027315-17027334 None:intergenic 30.0%
TTGAGGATCATATGAATGAA+TGG - chr8_4:17027322-17027341 Msa1316560:intron 30.0%
GATCATATGAATGAATGGAT+GGG - chr8_4:17027327-17027346 Msa1316560:intron 30.0%
TCTTTATATGGAGAAGAATG+AGG - chr8_4:17027455-17027474 Msa1316560:intron 30.0%
!! TGTTCATCATAGTTTGTTTG+CGG - chr8_4:17027608-17027627 Msa1316560:intron 30.0%
TATCAAAAGAAGTAGCATTG+AGG - chr8_4:17028099-17028118 Msa1316560:intron 30.0%
! ATTGAGGTTTTTACCTGATT+TGG - chr8_4:17028115-17028134 Msa1316560:CDS 30.0%
AAATGTATTATGAGGGTTCT+TGG - chr8_4:17028335-17028354 Msa1316560:CDS 30.0%
TCAAATATCTGCATGTAGAT+TGG + chr8_4:17028653-17028672 None:intergenic 30.0%
TGAAGAAACAAAAAATTCCC+GGG + chr8_4:17029377-17029396 None:intergenic 30.0%
AACTTACTCAAACTAATGCT+CGG + chr8_4:17029507-17029526 None:intergenic 30.0%
!! TCTGTTTTGAATGTGCTTAT+TGG - chr8_4:17029546-17029565 Msa1316560:CDS 30.0%
TGCACTAAAATTTGCAAGAA+CGG - chr8_4:17029866-17029885 Msa1316560:CDS 30.0%
TCCCCATATAAAATGAAACA+TGG + chr8_4:17029945-17029964 None:intergenic 30.0%
TGGATTTCTCATTGAACTTA+AGG - chr8_4:17030004-17030023 Msa1316560:CDS 30.0%
!!! TTAAGTTTTTTCTTGGTTGG+AGG - chr8_4:17030274-17030293 Msa1316560:CDS 30.0%
! TTCATCTTTCTCCTTTTGTT+TGG - chr8_4:17030348-17030367 Msa1316560:CDS 30.0%
AGACTTATATATGCTTCTGA+AGG - chr8_4:17030413-17030432 Msa1316560:CDS 30.0%
GACTTATATATGCTTCTGAA+GGG - chr8_4:17030414-17030433 Msa1316560:CDS 30.0%
TAAAATCCCAATAGACCAAA+TGG + chr8_4:17030797-17030816 None:intergenic 30.0%
!! CTTGTTGCTAGTCTTCAAAA+AGG - chr8_4:17027003-17027022 Msa1316560:three_prime_UTR 35.0%
! ACCATTGATTGAAGCGTAAT+CGG + chr8_4:17027040-17027059 None:intergenic 35.0%
AAAAGCGGTTTAAGAGTTTC+CGG + chr8_4:17027237-17027256 None:intergenic 35.0%
AATTTCTGTGACTCGAAAAG+CGG + chr8_4:17027252-17027271 None:intergenic 35.0%
AGTCACAGAAATTGTGTTGT+AGG - chr8_4:17027259-17027278 Msa1316560:intron 35.0%
GGATCATATGAATGAATGGA+TGG - chr8_4:17027326-17027345 Msa1316560:intron 35.0%
TTATATGGAGAAGAATGAGG+AGG - chr8_4:17027458-17027477 Msa1316560:intron 35.0%
! GGCAATTAAGTTTTTGACGA+CGG - chr8_4:17027575-17027594 Msa1316560:intron 35.0%
ATTATACCGCAGATTTGTCA+GGG - chr8_4:17027639-17027658 Msa1316560:intron 35.0%
TGAGTATATTAGGAGGGATA+TGG - chr8_4:17027725-17027744 Msa1316560:intron 35.0%
TATATTAGGAGGGATATGGA+AGG - chr8_4:17027729-17027748 Msa1316560:intron 35.0%
AAGGTAGTGATCTTGATACA+AGG - chr8_4:17027748-17027767 Msa1316560:intron 35.0%
ATTGCTTGTGAGTTGCTTAA+GGG - chr8_4:17027777-17027796 Msa1316560:intron 35.0%
CAAGGATTGTGCGATATATT+TGG - chr8_4:17027902-17027921 Msa1316560:intron 35.0%
TTGAACATCAACAAGATCTG+TGG + chr8_4:17027970-17027989 None:intergenic 35.0%
GAATGAGTATCCAATGCTTA+AGG - chr8_4:17028037-17028056 Msa1316560:intron 35.0%
ACTCTTAATAGTAAAGGACG+AGG - chr8_4:17028199-17028218 Msa1316560:CDS 35.0%
CTCTTAATAGTAAAGGACGA+GGG - chr8_4:17028200-17028219 Msa1316560:CDS 35.0%
! TTCATCAGCATTGAGAAAAC+TGG + chr8_4:17028260-17028279 None:intergenic 35.0%
! AACAGATAATGGTTGAAGGT+GGG + chr8_4:17028449-17028468 None:intergenic 35.0%
! AAACAGATAATGGTTGAAGG+TGG + chr8_4:17028450-17028469 None:intergenic 35.0%
! CTCAAACAGATAATGGTTGA+AGG + chr8_4:17028453-17028472 None:intergenic 35.0%
!! CTACTGACTCAAACAGATAA+TGG + chr8_4:17028460-17028479 None:intergenic 35.0%
CAAAAACAGACACAAGAGTT+GGG + chr8_4:17028514-17028533 None:intergenic 35.0%
TCAAAAACAGACACAAGAGT+TGG + chr8_4:17028515-17028534 None:intergenic 35.0%
ACAGTATTATTTCAAGCCGA+GGG + chr8_4:17028550-17028569 None:intergenic 35.0%
CAAGTAACTGAAATGCGTAT+GGG + chr8_4:17028595-17028614 None:intergenic 35.0%
ATATCTGCATGTAGATTGGT+GGG + chr8_4:17028649-17028668 None:intergenic 35.0%
AATATCTGCATGTAGATTGG+TGG + chr8_4:17028650-17028669 None:intergenic 35.0%
! TTCTTTTGTCACCTGATTCT+TGG - chr8_4:17028675-17028694 Msa1316560:CDS 35.0%
GTCAAATATGCCAAGTACTT+TGG + chr8_4:17028792-17028811 None:intergenic 35.0%
GCCTTATGTTTCTCACATTT+GGG - chr8_4:17028898-17028917 Msa1316560:CDS 35.0%
TGAATATCAAGAGAGACTTG+AGG + chr8_4:17028967-17028986 None:intergenic 35.0%
GATATTCAGTTCACTGTTTC+TGG - chr8_4:17028979-17028998 Msa1316560:CDS 35.0%
ACTAAATATATCAGGCTGGA+CGG + chr8_4:17029044-17029063 None:intergenic 35.0%
CCAGTAATCAGCTTAAGATT+CGG + chr8_4:17029091-17029110 None:intergenic 35.0%
GTATTGTGACACTTCTTTCT+CGG - chr8_4:17029218-17029237 Msa1316560:CDS 35.0%
! CCTACATTTTCTGCAATATC+TGG + chr8_4:17029280-17029299 None:intergenic 35.0%
CCAGATATTGCAGAAAATGT+AGG - chr8_4:17029277-17029296 Msa1316560:CDS 35.0%
GATCATTAATATCTGGAAGG+GGG + chr8_4:17029354-17029373 None:intergenic 35.0%
GGATCATTAATATCTGGAAG+GGG + chr8_4:17029355-17029374 None:intergenic 35.0%
GGGATCATTAATATCTGGAA+GGG + chr8_4:17029356-17029375 None:intergenic 35.0%
TTCCAGATATTAATGATCCC+CGG - chr8_4:17029356-17029375 Msa1316560:CDS 35.0%
GAAGAAACAAAAAATTCCCG+GGG + chr8_4:17029376-17029395 None:intergenic 35.0%
! GAGCATTAGTTTGAGTAAGT+TGG - chr8_4:17029506-17029525 Msa1316560:CDS 35.0%
GGTAGATTAAGGAAAAGTCA+TGG + chr8_4:17029580-17029599 None:intergenic 35.0%
! TGCATTCATCTCAGTTCTTT+TGG - chr8_4:17029662-17029681 Msa1316560:CDS 35.0%
CAAAATACCCACAGCTAAAA+GGG + chr8_4:17029721-17029740 None:intergenic 35.0%
! TTTATTGGTAGCAACTAGCA+AGG - chr8_4:17029772-17029791 Msa1316560:CDS 35.0%
! TTATTGGTAGCAACTAGCAA+GGG - chr8_4:17029773-17029792 Msa1316560:CDS 35.0%
!! TTTTGTTCCTCTTGGTTTGA+TGG - chr8_4:17029908-17029927 Msa1316560:CDS 35.0%
AATACATGACTGCAGTGATA+CGG + chr8_4:17030042-17030061 None:intergenic 35.0%
ACACTATGGAAGTCAATGAT+GGG + chr8_4:17030080-17030099 None:intergenic 35.0%
CGCAAAATGAATTCACACTA+TGG + chr8_4:17030094-17030113 None:intergenic 35.0%
!! ATCTTTCTCCTTTTGTTTGG+TGG - chr8_4:17030351-17030370 Msa1316560:CDS 35.0%
!! TCTTTCTCCTTTTGTTTGGT+GGG - chr8_4:17030352-17030371 Msa1316560:CDS 35.0%
AACCACTCAAATGTTGCAAA+AGG + chr8_4:17030612-17030631 None:intergenic 35.0%
AATCACTACCATTTGCTCAA+AGG + chr8_4:17030885-17030904 None:intergenic 35.0%
GAAAAATGTGGATTTGACTG+AGG + chr8_4:17031070-17031089 None:intergenic 35.0%
!! AGTTTGTTGGTTCCATTCCA+TGG + chr8_4:17026611-17026630 None:intergenic 40.0%
AGAGGAATTGGAGAGTTTGT+TGG + chr8_4:17026624-17026643 None:intergenic 40.0%
!!! GAGGTGGTTTTTGAAGTTGA+CGG + chr8_4:17026803-17026822 None:intergenic 40.0%
! TTTGTTCCTTTTCGGAATCG+AGG + chr8_4:17026858-17026877 None:intergenic 40.0%
!! AGATTGGATTTTGTTGGTGG+CGG + chr8_4:17026911-17026930 None:intergenic 40.0%
! CTGAGATTGGATTTTGTTGG+TGG + chr8_4:17026914-17026933 None:intergenic 40.0%
! GAGCTGAGATTGGATTTTGT+TGG + chr8_4:17026917-17026936 None:intergenic 40.0%
ATCACGATTTCCCCAAATCA+TGG - chr8_4:17026962-17026981 Msa1316560:three_prime_UTR 40.0%
TGAAGACTAGCAACAAGTTC+CGG + chr8_4:17027000-17027019 None:intergenic 40.0%
TCCGATTACGCTTCAATCAA+TGG - chr8_4:17027036-17027055 Msa1316560:three_prime_UTR 40.0%
!!! AGAGTTGCCTGAGTTTTTTG+AGG - chr8_4:17027305-17027324 Msa1316560:intron 40.0%
ATGAATGGATGGGTGAGTTT+AGG - chr8_4:17027337-17027356 Msa1316560:intron 40.0%
TGCTAGTTATCCTTCTCTTG+AGG - chr8_4:17027371-17027390 Msa1316560:intron 40.0%
GCTAGTTATCCTTCTCTTGA+GGG - chr8_4:17027372-17027391 Msa1316560:intron 40.0%
CTAGTTATCCTTCTCTTGAG+GGG - chr8_4:17027373-17027392 Msa1316560:intron 40.0%
GAAGAATGAGGAGGAGTTTA+AGG - chr8_4:17027467-17027486 Msa1316560:intron 40.0%
!!! ATGATTTTGCACTTGCTGTG+TGG - chr8_4:17027499-17027518 Msa1316560:intron 40.0%
TTGCTGTGTGGACTTTGTTA+GGG - chr8_4:17027511-17027530 Msa1316560:intron 40.0%
AATCTGCGGTATAATCCCAT+CGG + chr8_4:17027634-17027653 None:intergenic 40.0%
GATTATACCGCAGATTTGTC+AGG - chr8_4:17027638-17027657 Msa1316560:intron 40.0%
TTATACCGCAGATTTGTCAG+GGG - chr8_4:17027640-17027659 Msa1316560:intron 40.0%
GTAGTGATCTTGATACAAGG+AGG - chr8_4:17027751-17027770 Msa1316560:intron 40.0%
GATTGCTTGTGAGTTGCTTA+AGG - chr8_4:17027776-17027795 Msa1316560:intron 40.0%
TTGCTTGTGAGTTGCTTAAG+GGG - chr8_4:17027778-17027797 Msa1316560:intron 40.0%
AAGCTCCTTTAATGCAAACC+CGG - chr8_4:17027863-17027882 Msa1316560:intron 40.0%
GGATTGTGCGATATATTTGG+TGG - chr8_4:17027905-17027924 Msa1316560:intron 40.0%
GGTCTCTCTTTCTACAAAGA+AGG - chr8_4:17027926-17027945 Msa1316560:intron 40.0%
AAGATCTGTGGAGACATAAC+CGG + chr8_4:17027958-17027977 None:intergenic 40.0%
!!! CATCTGCTTTTTGCAACTCA+GGG + chr8_4:17028016-17028035 None:intergenic 40.0%
!!! ACATCTGCTTTTTGCAACTC+AGG + chr8_4:17028017-17028036 None:intergenic 40.0%
TTAATAGTAAAGGACGAGGG+TGG - chr8_4:17028203-17028222 Msa1316560:CDS 40.0%
! ACTGATTCTCTTCAGACTCT+GGG + chr8_4:17028307-17028326 None:intergenic 40.0%
!! TACTGATTCTCTTCAGACTC+TGG + chr8_4:17028308-17028327 None:intergenic 40.0%
TGTTGCTCGAATTTGCATTG+AGG - chr8_4:17028379-17028398 Msa1316560:CDS 40.0%
GTTGCTCGAATTTGCATTGA+GGG - chr8_4:17028380-17028399 Msa1316560:CDS 40.0%
TTGCTCGAATTTGCATTGAG+GGG - chr8_4:17028381-17028400 Msa1316560:CDS 40.0%
! ACAGATAATGGTTGAAGGTG+GGG + chr8_4:17028448-17028467 None:intergenic 40.0%
TATCTGTTTGAGTCAGTAGC+CGG - chr8_4:17028461-17028480 Msa1316560:CDS 40.0%
! TTGAAACAAGCCTTTTCCCT+CGG - chr8_4:17028531-17028550 Msa1316560:CDS 40.0%
TTATTTCAAGCCGAGGGAAA+AGG + chr8_4:17028544-17028563 None:intergenic 40.0%
GACAGTATTATTTCAAGCCG+AGG + chr8_4:17028551-17028570 None:intergenic 40.0%
GCAAGTAACTGAAATGCGTA+TGG + chr8_4:17028596-17028615 None:intergenic 40.0%
!!! ATTTGGTGCCTTTTGAAGGA+AGG + chr8_4:17028744-17028763 None:intergenic 40.0%
!!! TCTCATTTGGTGCCTTTTGA+AGG + chr8_4:17028748-17028767 None:intergenic 40.0%
! GATAGACTGACCAAAGTACT+TGG - chr8_4:17028779-17028798 Msa1316560:CDS 40.0%
CGCCTTATGTTTCTCACATT+TGG - chr8_4:17028897-17028916 Msa1316560:CDS 40.0%
GCCCAAATGTGAGAAACATA+AGG + chr8_4:17028902-17028921 None:intergenic 40.0%
!! TTTTTAGAGAGCTCCAGAGA+AGG - chr8_4:17028927-17028946 Msa1316560:CDS 40.0%
!! TCACTGTTTCTGGTTAAGCA+TGG - chr8_4:17028989-17029008 Msa1316560:CDS 40.0%
TCGCACTAAATATATCAGGC+TGG + chr8_4:17029048-17029067 None:intergenic 40.0%
AAGATTCGGAATCCAGAACT+GGG + chr8_4:17029077-17029096 None:intergenic 40.0%
TAAGATTCGGAATCCAGAAC+TGG + chr8_4:17029078-17029097 None:intergenic 40.0%
CCGAATCTTAAGCTGATTAC+TGG - chr8_4:17029088-17029107 Msa1316560:CDS 40.0%
ATTGTAAAGTTGGACGAAGG+TGG + chr8_4:17029311-17029330 None:intergenic 40.0%
AGCATTGTAAAGTTGGACGA+AGG + chr8_4:17029314-17029333 None:intergenic 40.0%
TTCGTCCAACTTTACAATGC+TGG - chr8_4:17029313-17029332 Msa1316560:CDS 40.0%
TCCAACTTTACAATGCTGGA+AGG - chr8_4:17029317-17029336 Msa1316560:CDS 40.0%
TCCTTCCAGCATTGTAAAGT+TGG + chr8_4:17029321-17029340 None:intergenic 40.0%
GGGGATCATTAATATCTGGA+AGG + chr8_4:17029357-17029376 None:intergenic 40.0%
TCCAGATATTAATGATCCCC+GGG - chr8_4:17029357-17029376 Msa1316560:CDS 40.0%
CATTTGCAGTGATGACTTGA+GGG + chr8_4:17029435-17029454 None:intergenic 40.0%
ACATTTGCAGTGATGACTTG+AGG + chr8_4:17029436-17029455 None:intergenic 40.0%
AACTAATGCTCGGTTGTAAG+TGG + chr8_4:17029497-17029516 None:intergenic 40.0%
CCAAAATACCCACAGCTAAA+AGG + chr8_4:17029722-17029741 None:intergenic 40.0%
!! CCTTTTAGCTGTGGGTATTT+TGG - chr8_4:17029719-17029738 Msa1316560:CDS 40.0%
! TCTGTCTCTTTTGTTCCTCT+TGG - chr8_4:17029900-17029919 Msa1316560:CDS 40.0%
GAGTATACCATCAAACCAAG+AGG + chr8_4:17029918-17029937 None:intergenic 40.0%
CACACTATGGAAGTCAATGA+TGG + chr8_4:17030081-17030100 None:intergenic 40.0%
!! CTGTTTGGTTTGTGAGAAAG+AGG - chr8_4:17030313-17030332 Msa1316560:CDS 40.0%
CTTACTACCCACCAAACAAA+AGG + chr8_4:17030362-17030381 None:intergenic 40.0%
TACTCTCCTCTTCTCATGTT+TGG - chr8_4:17030459-17030478 Msa1316560:CDS 40.0%
TTCACTCCAAACATGAGAAG+AGG + chr8_4:17030468-17030487 None:intergenic 40.0%
TTAATTCTCAGGATCTGTGC+TGG - chr8_4:17030553-17030572 Msa1316560:CDS 40.0%
TAATTCTCAGGATCTGTGCT+GGG - chr8_4:17030554-17030573 Msa1316560:CDS 40.0%
TCAAATGTTGCAAAAGGCTG+AGG + chr8_4:17030606-17030625 None:intergenic 40.0%
! AGCCTTTTGCAACATTTGAG+TGG - chr8_4:17030607-17030626 Msa1316560:CDS 40.0%
! ACAGAAGTATACTCGACAGT+AGG + chr8_4:17030647-17030666 None:intergenic 40.0%
! CATGTGTTTGAAGTGCCATT+TGG - chr8_4:17030779-17030798 Msa1316560:CDS 40.0%
!! TGAAGTGCCATTTGGTCTAT+TGG - chr8_4:17030787-17030806 Msa1316560:CDS 40.0%
!! GAAGTGCCATTTGGTCTATT+GGG - chr8_4:17030788-17030807 Msa1316560:CDS 40.0%
AATGCAGGAAATTGGGGAAA+GGG + chr8_4:17030841-17030860 None:intergenic 40.0%
AAATGCAGGAAATTGGGGAA+AGG + chr8_4:17030842-17030861 None:intergenic 40.0%
AAGCGGAAATGCAGGAAATT+GGG + chr8_4:17030848-17030867 None:intergenic 40.0%
CCATGGTGAATGTGCGATTA+GGG + chr8_4:17026594-17026613 None:intergenic 45.0%
TCCATGGTGAATGTGCGATT+AGG + chr8_4:17026595-17026614 None:intergenic 45.0%
ATCGCACATTCACCATGGAA+TGG - chr8_4:17026596-17026615 Msa1316560:three_prime_UTR 45.0%
!!! GTTTTTGAAGTTGACGGCAG+CGG + chr8_4:17026797-17026816 None:intergenic 45.0%
GAGGATTGGGTTATCTTCAG+CGG + chr8_4:17026839-17026858 None:intergenic 45.0%
! CCTTTTCGGAATCGAGGATT+GGG + chr8_4:17026852-17026871 None:intergenic 45.0%
! TCCTTTTCGGAATCGAGGAT+TGG + chr8_4:17026853-17026872 None:intergenic 45.0%
! GAGCATGAGAGGTACGATTA+GGG + chr8_4:17026887-17026906 None:intergenic 45.0%
! AGAGCATGAGAGGTACGATT+AGG + chr8_4:17026888-17026907 None:intergenic 45.0%
GTGATTCCCGATGATAGCTA+GGG + chr8_4:17026947-17026966 None:intergenic 45.0%
TTGCTCTTGTGGATGAGCTT+AGG - chr8_4:17027409-17027428 Msa1316560:intron 45.0%
TGCTCTTGTGGATGAGCTTA+GGG - chr8_4:17027410-17027429 Msa1316560:intron 45.0%
! CTTGCTGTGTGGACTTTGTT+AGG - chr8_4:17027510-17027529 Msa1316560:intron 45.0%
!! ATAGTTTGTTTGCGGCCGAT+GGG - chr8_4:17027616-17027635 Msa1316560:intron 45.0%
ACAATCCCCTGACAAATCTG+CGG + chr8_4:17027648-17027667 None:intergenic 45.0%
GGATTGTGATTCCGAATGTG+AGG - chr8_4:17027661-17027680 Msa1316560:intron 45.0%
TGATTCCGAATGTGAGGTTG+AGG - chr8_4:17027667-17027686 Msa1316560:intron 45.0%
GATTCCGAATGTGAGGTTGA+GGG - chr8_4:17027668-17027687 Msa1316560:intron 45.0%
GTGATCTTGATACAAGGAGG+AGG - chr8_4:17027754-17027773 Msa1316560:intron 45.0%
TCTACAAAGAAGGCTGCAAC+CGG - chr8_4:17027936-17027955 Msa1316560:intron 45.0%
GAGTATCCAATGCTTAAGGC+AGG - chr8_4:17028041-17028060 Msa1316560:intron 45.0%
GCAAGGAAACGAACCAAATC+AGG + chr8_4:17028131-17028150 None:intergenic 45.0%
! TTTGGTTCGTTTCCTTGCTG+CGG - chr8_4:17028133-17028152 Msa1316560:CDS 45.0%
! TTCAGACTCTGGGAGCTTAA+AGG + chr8_4:17028297-17028316 None:intergenic 45.0%
TCGAATTTGCATTGAGGGGT+TGG - chr8_4:17028385-17028404 Msa1316560:CDS 45.0%
CGAATTTGCATTGAGGGGTT+GGG - chr8_4:17028386-17028405 Msa1316560:CDS 45.0%
GAATTTGCATTGAGGGGTTG+GGG - chr8_4:17028387-17028406 Msa1316560:CDS 45.0%
!!! TGGTTGAAGGTGGGGTTTTT+TGG + chr8_4:17028440-17028459 None:intergenic 45.0%
TGCATGTAGATTGGTGGGAT+GGG + chr8_4:17028644-17028663 None:intergenic 45.0%
! GCGCTTCTTTTCCAAGAATC+AGG + chr8_4:17028689-17028708 None:intergenic 45.0%
CACCAAATGAGATCAGCCAA+GGG - chr8_4:17028756-17028775 Msa1316560:CDS 45.0%
ACCAAATGAGATCAGCCAAG+GGG - chr8_4:17028757-17028776 Msa1316560:CDS 45.0%
GCATCAAGCACTTCTGATCA+AGG - chr8_4:17028824-17028843 Msa1316560:CDS 45.0%
TGGAGACTCACAAATGAGTC+TGG + chr8_4:17029149-17029168 None:intergenic 45.0%
TTGTGAGTCTCCAGTACTTC+TGG - chr8_4:17029156-17029175 Msa1316560:CDS 45.0%
TTCTGCATCCTGGGGTAAAA+TGG - chr8_4:17029189-17029208 Msa1316560:CDS 45.0%
TTTCTCGGCAAGAACAAGAC+AGG - chr8_4:17029233-17029252 Msa1316560:CDS 45.0%
TTCTCGGCAAGAACAAGACA+GGG - chr8_4:17029234-17029253 Msa1316560:CDS 45.0%
TCTGCAATATCTGGCATGTC+AGG + chr8_4:17029271-17029290 None:intergenic 45.0%
TCCCGGGGATCATTAATATC+TGG + chr8_4:17029361-17029380 None:intergenic 45.0%
!! ATCGTTGACCCTTTTAGCTG+TGG - chr8_4:17029710-17029729 Msa1316560:CDS 45.0%
!! TCGTTGACCCTTTTAGCTGT+GGG - chr8_4:17029711-17029730 Msa1316560:CDS 45.0%
CGAAAATACACGAACTAGCC+TGG - chr8_4:17030112-17030131 Msa1316560:CDS 45.0%
TGGGATTGAGCATTACTGTC+TGG - chr8_4:17030578-17030597 Msa1316560:CDS 45.0%
ATCACGACACCGGCAAAAAT+TGG + chr8_4:17030704-17030723 None:intergenic 45.0%
!!! TTGCCGGTGTCGTGATTTTA+TGG - chr8_4:17030708-17030727 Msa1316560:CDS 45.0%
ATGCAGGAAATTGGGGAAAG+GGG + chr8_4:17030840-17030859 None:intergenic 45.0%
AGCGGAAATGCAGGAAATTG+GGG + chr8_4:17030847-17030866 None:intergenic 45.0%
CAAGCGGAAATGCAGGAAAT+TGG + chr8_4:17030849-17030868 None:intergenic 45.0%
CATGCATGCCTTTGAGCAAA+TGG - chr8_4:17030874-17030893 Msa1316560:CDS 45.0%
CCCTAATCGCACATTCACCA+TGG - chr8_4:17026591-17026610 Msa1316560:three_prime_UTR 50.0%
!! GGAAGCATTCGGAGAGGAAT+TGG + chr8_4:17026636-17026655 None:intergenic 50.0%
!! GAGAGTGTGGAGGAAGCATT+CGG + chr8_4:17026647-17026666 None:intergenic 50.0%
! TTGACGGATCTGATCGGAGA+TGG + chr8_4:17026773-17026792 None:intergenic 50.0%
GGTTATCTTCAGCGGACCAA+CGG + chr8_4:17026831-17026850 None:intergenic 50.0%
CCCAATCCTCGATTCCGAAA+AGG - chr8_4:17026849-17026868 Msa1316560:three_prime_UTR 50.0%
TCCGAAGCCCTAGCTATCAT+CGG - chr8_4:17026937-17026956 Msa1316560:three_prime_UTR 50.0%
CGTGATTCCCGATGATAGCT+AGG + chr8_4:17026948-17026967 None:intergenic 50.0%
AGAAGCGAGGGCCATGATTT+GGG + chr8_4:17026976-17026995 None:intergenic 50.0%
AAGAAGCGAGGGCCATGATT+TGG + chr8_4:17026977-17026996 None:intergenic 50.0%
ACAAGTTCCGGAAGAAGCGA+GGG + chr8_4:17026988-17027007 None:intergenic 50.0%
AACAAGTTCCGGAAGAAGCG+AGG + chr8_4:17026989-17027008 None:intergenic 50.0%
! TTAAGAGTTTCCGGTGGTGG+TGG + chr8_4:17027228-17027247 None:intergenic 50.0%
GGTTTAAGAGTTTCCGGTGG+TGG + chr8_4:17027231-17027250 None:intergenic 50.0%
AGCGGTTTAAGAGTTTCCGG+TGG + chr8_4:17027234-17027253 None:intergenic 50.0%
! TGCTGATGGTCTTGCTCTTG+TGG - chr8_4:17027398-17027417 Msa1316560:intron 50.0%
TAATTGCCGTAACCGCAAGC+TGG + chr8_4:17027563-17027582 None:intergenic 50.0%
!! CATAGTTTGTTTGCGGCCGA+TGG - chr8_4:17027615-17027634 Msa1316560:intron 50.0%
TCCTCCCTCAACCTCACATT+CGG + chr8_4:17027675-17027694 None:intergenic 50.0%
AAGGGGATTGCTACGCGTTA+TGG - chr8_4:17027795-17027814 Msa1316560:intron 50.0%
CTCCTTTAATGCAAACCCGG+TGG - chr8_4:17027866-17027885 Msa1316560:intron 50.0%
TTGTCCTTCCAATTCGCCAC+CGG + chr8_4:17027885-17027904 None:intergenic 50.0%
AGTGCACCTGCCTTAAGCAT+TGG + chr8_4:17028050-17028069 None:intergenic 50.0%
CAACATTTGACTCCGCAGCA+AGG + chr8_4:17028148-17028167 None:intergenic 50.0%
ATGTAGATTGGTGGGATGGG+TGG + chr8_4:17028641-17028660 None:intergenic 50.0%
CTGCATGTAGATTGGTGGGA+TGG + chr8_4:17028645-17028664 None:intergenic 50.0%
ACTCCAGGCCTTCCTTCAAA+AGG - chr8_4:17028733-17028752 Msa1316560:CDS 50.0%
GCACCAAATGAGATCAGCCA+AGG - chr8_4:17028755-17028774 Msa1316560:CDS 50.0%
TCCCCTTGGCTGATCTCATT+TGG + chr8_4:17028761-17028780 None:intergenic 50.0%
CTTTGGTCAGTCTATCCCCT+TGG + chr8_4:17028775-17028794 None:intergenic 50.0%
TTAGAGAGCTCCAGAGAAGG+CGG - chr8_4:17028930-17028949 Msa1316560:CDS 50.0%
!! GTGCGATTTTGACCCAGTTC+TGG - chr8_4:17029062-17029081 Msa1316560:CDS 50.0%
TGCATCCTGGGGTAAAATGG+TGG - chr8_4:17029192-17029211 Msa1316560:CDS 50.0%
! ACTGTCCACCATTTTACCCC+AGG + chr8_4:17029200-17029219 None:intergenic 50.0%
GCAAGAACAAGACAGGGTTG+AGG - chr8_4:17029240-17029259 Msa1316560:CDS 50.0%
AGAACAAGACAGGGTTGAGG+AGG - chr8_4:17029243-17029262 Msa1316560:CDS 50.0%
TATCTGGAAGGGGGTCTTCT+TGG + chr8_4:17029345-17029364 None:intergenic 50.0%
AGGGAACTGTGCACAAAGCT+GGG + chr8_4:17029404-17029423 None:intergenic 50.0%
! AGCTTTGTGCACAGTTCCCT+GGG - chr8_4:17029404-17029423 Msa1316560:CDS 50.0%
AGCAACGCTGTCTGATTCAC+AGG + chr8_4:17029463-17029482 None:intergenic 50.0%
CAGAGAAACAACTGTGCAGC+CGG + chr8_4:17030227-17030246 None:intergenic 50.0%
GTATACTCGACAGTAGGCAG+AGG + chr8_4:17030641-17030660 None:intergenic 50.0%
CCGCCATAAAATCACGACAC+CGG + chr8_4:17030714-17030733 None:intergenic 50.0%
!!! CCGGTGTCGTGATTTTATGG+CGG - chr8_4:17030711-17030730 Msa1316560:CDS 50.0%
TGCAGGAAATTGGGGAAAGG+GGG + chr8_4:17030839-17030858 None:intergenic 50.0%
TGCTCAACAAGCGGAAATGC+AGG + chr8_4:17030856-17030875 None:intergenic 50.0%
AGGCATGCATGCTCAACAAG+CGG + chr8_4:17030865-17030884 None:intergenic 50.0%
!! TGTGGAGGAAGCATTCGGAG+AGG + chr8_4:17026642-17026661 None:intergenic 55.0%
!! GAAGTTAGGTTGGGAGGAGG+CGG + chr8_4:17026716-17026735 None:intergenic 55.0%
CGGATCTGATCGGAGATGGA+GGG + chr8_4:17026769-17026788 None:intergenic 55.0%
ACGGATCTGATCGGAGATGG+AGG + chr8_4:17026770-17026789 None:intergenic 55.0%
! AGCGGCTTGACGGATCTGAT+CGG + chr8_4:17026779-17026798 None:intergenic 55.0%
AAAACCACCTCCGTCTCCGT+TGG - chr8_4:17026812-17026831 Msa1316560:three_prime_UTR 55.0%
CCCGATGATAGCTAGGGCTT+CGG + chr8_4:17026941-17026960 None:intergenic 55.0%
CCGAAGCCCTAGCTATCATC+GGG - chr8_4:17026938-17026957 Msa1316560:three_prime_UTR 55.0%
GAAGCGAGGGCCATGATTTG+GGG + chr8_4:17026975-17026994 None:intergenic 55.0%
ATCATGGCCCTCGCTTCTTC+CGG - chr8_4:17026978-17026997 Msa1316560:three_prime_UTR 55.0%
TCAGCACTCCCCTCAAGAGA+AGG + chr8_4:17027384-17027403 None:intergenic 55.0%
!! TCTCTTGAGGGGAGTGCTGA+TGG - chr8_4:17027384-17027403 Msa1316560:intron 55.0%
TGTGGATGAGCTTAGGGCTG+CGG - chr8_4:17027416-17027435 Msa1316560:intron 55.0%
! GACTAGTCGTGACCAGCTTG+CGG - chr8_4:17027548-17027567 Msa1316560:intron 55.0%
TCGTGACCAGCTTGCGGTTA+CGG - chr8_4:17027554-17027573 Msa1316560:intron 55.0%
TCCGAATGTGAGGTTGAGGG+AGG - chr8_4:17027671-17027690 Msa1316560:intron 55.0%
GAGGTTGAGGGAGGATGATG+AGG - chr8_4:17027680-17027699 Msa1316560:intron 55.0%
CGCCACCGGGTTTGCATTAA+AGG + chr8_4:17027871-17027890 None:intergenic 55.0%
ATGCAAACCCGGTGGCGAAT+TGG - chr8_4:17027874-17027893 Msa1316560:intron 55.0%
AAACCCGGTGGCGAATTGGA+AGG - chr8_4:17027878-17027897 Msa1316560:intron 55.0%
TGTCCTTCCAATTCGCCACC+GGG + chr8_4:17027884-17027903 None:intergenic 55.0%
GGTGGCGAATTGGAAGGACA+AGG - chr8_4:17027884-17027903 Msa1316560:intron 55.0%
TAGTAAAGGACGAGGGTGGC+AGG - chr8_4:17028207-17028226 Msa1316560:CDS 55.0%
! CAGTAGCCGGTCTTGTGAAG+CGG - chr8_4:17028474-17028493 Msa1316560:CDS 55.0%
! AGTAGCCGGTCTTGTGAAGC+GGG - chr8_4:17028475-17028494 Msa1316560:CDS 55.0%
AGAAGCCCGCTTCACAAGAC+CGG + chr8_4:17028483-17028502 None:intergenic 55.0%
! TTGTGAAGCGGGCTTCTGAG+AGG - chr8_4:17028486-17028505 Msa1316560:CDS 55.0%
! TGTGAAGCGGGCTTCTGAGA+GGG - chr8_4:17028487-17028506 Msa1316560:CDS 55.0%
!! GTGCCTTTTGAAGGAAGGCC+TGG + chr8_4:17028739-17028758 None:intergenic 55.0%
GCTTTACTGTCCGCCTTCTC+TGG + chr8_4:17028943-17028962 None:intergenic 55.0%
! GCTGCAGGATCCAGAAGTAC+TGG + chr8_4:17029169-17029188 None:intergenic 55.0%
ATCCTGCAGCTTCTGCATCC+TGG - chr8_4:17029179-17029198 Msa1316560:CDS 55.0%
TCCTGCAGCTTCTGCATCCT+GGG - chr8_4:17029180-17029199 Msa1316560:CDS 55.0%
CAGGGAACTGTGCACAAAGC+TGG + chr8_4:17029405-17029424 None:intergenic 55.0%
! CAGCTTTGTGCACAGTTCCC+TGG - chr8_4:17029403-17029422 Msa1316560:CDS 55.0%
TTTGTGCACAGTTCCCTGGG+AGG - chr8_4:17029407-17029426 Msa1316560:CDS 55.0%
TGACTTGAGGGAACCTCCCA+GGG + chr8_4:17029423-17029442 None:intergenic 55.0%
ATGACTTGAGGGAACCTCCC+AGG + chr8_4:17029424-17029443 None:intergenic 55.0%
TCTCAGGATCTGTGCTGGGA+TGG - chr8_4:17030558-17030577 Msa1316560:CDS 55.0%
CTCAGGATCTGTGCTGGGAT+GGG - chr8_4:17030559-17030578 Msa1316560:CDS 55.0%
! GGAGAGGAGAGAGAGTGTGG+AGG + chr8_4:17026657-17026676 None:intergenic 60.0%
CAGGGAGAGGAGAGAGAGTG+TGG + chr8_4:17026660-17026679 None:intergenic 60.0%
AGAGAGAGGATTCGGCGTGG+CGG + chr8_4:17026690-17026709 None:intergenic 60.0%
AGGAGAGAGAGGATTCGGCG+TGG + chr8_4:17026693-17026712 None:intergenic 60.0%
GGCGGAGGAGAGAGAGGATT+CGG + chr8_4:17026698-17026717 None:intergenic 60.0%
!! GGCGAAGTTAGGTTGGGAGG+AGG + chr8_4:17026719-17026738 None:intergenic 60.0%
!! GAGGGCGAAGTTAGGTTGGG+AGG + chr8_4:17026722-17026741 None:intergenic 60.0%
GGCGAGGGCGAAGTTAGGTT+GGG + chr8_4:17026725-17026744 None:intergenic 60.0%
TTCAGCGACGAGACGGAGGA+CGG + chr8_4:17026746-17026765 None:intergenic 60.0%
TGGAGGGTTCAGCGACGAGA+CGG + chr8_4:17026753-17026772 None:intergenic 60.0%
AGTTGACGGCAGCGGCTTGA+CGG + chr8_4:17026789-17026808 None:intergenic 60.0%
CTTCAGCGGACCAACGGAGA+CGG + chr8_4:17026825-17026844 None:intergenic 60.0%
!! TTGGTGGCGGAGAGCATGAG+AGG + chr8_4:17026898-17026917 None:intergenic 60.0%
GGGCTTCGGAGAGCTGAGAT+TGG + chr8_4:17026927-17026946 None:intergenic 60.0%
CGCAGCGTCAATCAACGACG+CGG + chr8_4:17027190-17027209 None:intergenic 60.0%
! CGCGTCGTTGATTGACGCTG+CGG - chr8_4:17027188-17027207 Msa1316560:intron 60.0%
!! AGAGTTTCCGGTGGTGGTGG+CGG + chr8_4:17027225-17027244 None:intergenic 60.0%
GAGGGTGGCAGGCTACGTTA+TGG - chr8_4:17028218-17028237 Msa1316560:CDS 60.0%
AAGCGCAAGTGTTCCTGCCC+TGG - chr8_4:17028703-17028722 Msa1316560:CDS 60.0%
CCTGCAGCTTCTGCATCCTG+GGG - chr8_4:17029181-17029200 Msa1316560:CDS 60.0%
!! GTTAGGTTGGGAGGAGGCGG+AGG + chr8_4:17026713-17026732 None:intergenic 65.0%
CGGCGAGGGCGAAGTTAGGT+TGG + chr8_4:17026726-17026745 None:intergenic 65.0%
AGGACGGCGAGGGCGAAGTT+AGG + chr8_4:17026730-17026749 None:intergenic 65.0%
AGGGTTCAGCGACGAGACGG+AGG + chr8_4:17026750-17026769 None:intergenic 65.0%
TGGAGTAGACGCACCAGGGC+AGG + chr8_4:17028719-17028738 None:intergenic 65.0%
TGCCCTGGTGCGTCTACTCC+AGG - chr8_4:17028718-17028737 Msa1316560:CDS 65.0%
GGCCTGGAGTAGACGCACCA+GGG + chr8_4:17028723-17028742 None:intergenic 65.0%
AGGCCTGGAGTAGACGCACC+AGG + chr8_4:17028724-17028743 None:intergenic 65.0%
CCCCAGGATGCAGAAGCTGC+AGG + chr8_4:17029184-17029203 None:intergenic 65.0%
AGAGGATTCGGCGTGGCGGC+GGG + chr8_4:17026686-17026705 None:intergenic 70.0%
GAGAGGATTCGGCGTGGCGG+CGG + chr8_4:17026687-17026706 None:intergenic 70.0%
GGAGGAGGCGGAGGAGAGAG+AGG + chr8_4:17026704-17026723 None:intergenic 70.0%
GACGAGACGGAGGACGGCGA+GGG + chr8_4:17026740-17026759 None:intergenic 70.0%
CGGACCAACGGAGACGGAGG+TGG + chr8_4:17026819-17026838 None:intergenic 70.0%
CAGCGGACCAACGGAGACGG+AGG + chr8_4:17026822-17026841 None:intergenic 70.0%
ACAGCAGCCGCCACCACCAC+CGG - chr8_4:17027215-17027234 Msa1316560:intron 70.0%
TGGCGGCGGGGTTCAGGGAG+AGG + chr8_4:17026673-17026692 None:intergenic 75.0%
GAGGATTCGGCGTGGCGGCG+GGG + chr8_4:17026685-17026704 None:intergenic 75.0%
CGACGAGACGGAGGACGGCG+AGG + chr8_4:17026741-17026760 None:intergenic 75.0%
! CGGCGTGGCGGCGGGGTTCA+GGG + chr8_4:17026678-17026697 None:intergenic 80.0%
! TCGGCGTGGCGGCGGGGTTC+AGG + chr8_4:17026679-17026698 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 17026500 17031122 17026500 ID=Msa1316560;Name=Msa1316560
chr8_4 mRNA 17026500 17031122 17026500 ID=Msa1316560-mRNA-1;Parent=Msa1316560;Name=Msa1316560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=110|1|1|1|0|1|2|559|969
chr8_4 exon 17026500 17027058 17026500 ID=Msa1316560-mRNA-1:exon:6323;Parent=Msa1316560-mRNA-1
chr8_4 exon 17028103 17031122 17028103 ID=Msa1316560-mRNA-1:exon:6322;Parent=Msa1316560-mRNA-1
chr8_4 five_prime_UTR 17031013 17031122 17031013 ID=Msa1316560-mRNA-1:five_prime_utr;Parent=Msa1316560-mRNA-1
chr8_4 CDS 17028103 17031012 17028103 ID=Msa1316560-mRNA-1:cds;Parent=Msa1316560-mRNA-1
chr8_4 three_prime_UTR 17026500 17027058 17026500 ID=Msa1316560-mRNA-1:three_prime_utr;Parent=Msa1316560-mRNA-1
Gene Sequence

>Msa1316560

ATGGAATGGAACCAACAAACTCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCTCTCCCTGAACCCCGCCGCCACGCCGAATCCTCTCTCTCCTCCGCCTCCTCCCAACCTAACTTCGCCCTCGCCGTCCTCCGTCTCGTCGCTGAACCCTCCATCTCCGATCAGATCCGTCAAGCCGCTGCCGTCAACTTCAAAAACCACCTCCGTCTCCGTTGGTCCGCTGAAGATAACCCAATCCTCGATTCCGAAAAGGAACAAATCAAAACCCTAATCGTACCTCTCATGCTCTCCGCCACCAACAAAATCCAATCTCAGCTCTCCGAAGCCCTAGCTATCATCGGGAATCACGATTTCCCCAAATCATGGCCCTCGCTTCTTCCGGAACTTGTTGCTAGTCTTCAAAAAGGTTCTCAGAGTTCCGATTACGCTTCAATCAATGGTATTCTCAGTACCGCGAATTCGATTTTTAAGAAATTTCGTTTTCAGTATAAAACTAATGATTTATTGCTTGATTTGAAGTATTGTTTGGATAATTTTGCTGCTCCTTTGCTTGAGATTTTTCTCAAAACCGCGTCGTTGATTGACGCTGCGGCTGCACAGCAGCCGCCACCACCACCGGAAACTCTTAAACCGCTTTTCGAGTCACAGAAATTGTGTTGTAGGATATTTTTTTCACTGAATTTTCAAGAGTTGCCTGAGTTTTTTGAGGATCATATGAATGAATGGATGGGTGAGTTTAGGAAGTATTTGACTGCTAGTTATCCTTCTCTTGAGGGGAGTGCTGATGGTCTTGCTCTTGTGGATGAGCTTAGGGCTGCGGTTTGTGAGAATATTAATCTTTATATGGAGAAGAATGAGGAGGAGTTTAAGGTTTTTTTGAATGATTTTGCACTTGCTGTGTGGACTTTGTTAGGGAATGTGTCGCAGTCGACTAGTCGTGACCAGCTTGCGGTTACGGCAATTAAGTTTTTGACGACGGTTAGTACGAGTGTTCATCATAGTTTGTTTGCGGCCGATGGGATTATACCGCAGATTTGTCAGGGGATTGTGATTCCGAATGTGAGGTTGAGGGAGGATGATGAGGAGTTGTTTGAGATGAATCATATTGAGTATATTAGGAGGGATATGGAAGGTAGTGATCTTGATACAAGGAGGAGGATTGCTTGTGAGTTGCTTAAGGGGATTGCTACGCGTTATGGAGATGCTGTTAGAAGCATTGTTTCTGCGCAAGTACAGAGTTTGTTAAGCTCCTTTAATGCAAACCCGGTGGCGAATTGGAAGGACAAGGATTGTGCGATATATTTGGTGGTCTCTCTTTCTACAAAGAAGGCTGCAACCGGTTATGTCTCCACAGATCTTGTTGATGTTCAAAGCTTTTTTGAATCTGTGATTGTCCCTGAGTTGCAAAAAGCAGATGTGAATGAGTATCCAATGCTTAAGGCAGGTGCACTCAAGTTCTTTACTATGTTCCGATCTCAAATATCAAAAGAAGTAGCATTGAGGTTTTTACCTGATTTGGTTCGTTTCCTTGCTGCGGAGTCAAATGTTGTTCATTCTTATGCTGCTAGCTGTATTGAGAAACTCTTAATAGTAAAGGACGAGGGTGGCAGGCTACGTTATGGTTCAGCAGATATCGCTCCAGTTTTCTCAATGCTGATGAACAATCTTTTCAGTGCCTTTAAGCTCCCAGAGTCTGAAGAGAATCAGTATGTTATGAAATGTATTATGAGGGTTCTTGGTGTTGCAGATATACAACTTGATGTTGCTCGAATTTGCATTGAGGGGTTGGGGTCAATTCTTTCTGAAGTTTGCAGAAATCCAAAAAACCCCACCTTCAACCATTATCTGTTTGAGTCAGTAGCCGGTCTTGTGAAGCGGGCTTCTGAGAGGGACCCAACTCTTGTGTCTGTTTTTGAAACAAGCCTTTTCCCTCGGCTTGAAATAATACTGTCCAATGATGTAACTGAATTTTTCCCATACGCATTTCAGTTACTTGCTCTGCTTGTTGAGTTAAACAGACCACCCATCCCACCAATCTACATGCAGATATTTGAGATTCTTTTGTCACCTGATTCTTGGAAAAGAAGCGCAAGTGTTCCTGCCCTGGTGCGTCTACTCCAGGCCTTCCTTCAAAAGGCACCAAATGAGATCAGCCAAGGGGATAGACTGACCAAAGTACTTGGCATATTTGACACGCTAATACAAGCATCAAGCACTTCTGATCAAGGATTTTACGTGCTTAACACAGTCATTGAAAGTCTTCAGTATGATGTTCTTACGCCTTATGTTTCTCACATTTGGGCTGCTATTTTTAGAGAGCTCCAGAGAAGGCGGACAGTAAAGCTCCTCAAGTCTCTCTTGATATTCAGTTCACTGTTTCTGGTTAAGCATGGTTCTGCAAATCTAGTTAATACTATGAATGCCGTCCAGCCTGATATATTTAGTGCGATTTTGACCCAGTTCTGGATTCCGAATCTTAAGCTGATTACTGGAACTATAGAGCTCAAACTGACTGCAGTTGCTTCAACCAGACTCATTTGTGAGTCTCCAGTACTTCTGGATCCTGCAGCTTCTGCATCCTGGGGTAAAATGGTGGACAGTATTGTGACACTTCTTTCTCGGCAAGAACAAGACAGGGTTGAGGAGGAGCCTGACATGCCAGATATTGCAGAAAATGTAGGTTATACTGCCACCTTCGTCCAACTTTACAATGCTGGAAGGAACCAAGAAGACCCCCTTCCAGATATTAATGATCCCCGGGAATTTTTTGTTTCTTCATTGGCCCAGCTTTGTGCACAGTTCCCTGGGAGGTTCCCTCAAGTCATCACTGCAAATGTTGATCCTGTGAATCAGACAGCGTTGCTTCAACTTTGCACCACTTACAACCGAGCATTAGTTTGA
Protein sequence

>Msa1316560

MEWNQQTLQFLSECFLHTLSPLPEPRRHAESSLSSASSQPNFALAVLRLVAEPSISDQIRQAAAVNFKNHLRLRWSAEDNPILDSEKEQIKTLIVPLMLSATNKIQSQLSEALAIIGNHDFPKSWPSLLPELVASLQKGSQSSDYASINGILSTANSIFKKFRFQYKTNDLLLDLKYCLDNFAAPLLEIFLKTASLIDAAAAQQPPPPPETLKPLFESQKLCCRIFFSLNFQELPEFFEDHMNEWMGEFRKYLTASYPSLEGSADGLALVDELRAAVCENINLYMEKNEEEFKVFLNDFALAVWTLLGNVSQSTSRDQLAVTAIKFLTTVSTSVHHSLFAADGIIPQICQGIVIPNVRLREDDEELFEMNHIEYIRRDMEGSDLDTRRRIACELLKGIATRYGDAVRSIVSAQVQSLLSSFNANPVANWKDKDCAIYLVVSLSTKKAATGYVSTDLVDVQSFFESVIVPELQKADVNEYPMLKAGALKFFTMFRSQISKEVALRFLPDLVRFLAAESNVVHSYAASCIEKLLIVKDEGGRLRYGSADIAPVFSMLMNNLFSAFKLPESEENQYVMKCIMRVLGVADIQLDVARICIEGLGSILSEVCRNPKNPTFNHYLFESVAGLVKRASERDPTLVSVFETSLFPRLEIILSNDVTEFFPYAFQLLALLVELNRPPIPPIYMQIFEILLSPDSWKRSASVPALVRLLQAFLQKAPNEISQGDRLTKVLGIFDTLIQASSTSDQGFYVLNTVIESLQYDVLTPYVSHIWAAIFRELQRRRTVKLLKSLLIFSSLFLVKHGSANLVNTMNAVQPDIFSAILTQFWIPNLKLITGTIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRQEQDRVEEEPDMPDIAENVGYTATFVQLYNAGRNQEDPLPDINDPREFFVSSLAQLCAQFPGRFPQVITANVDPVNQTALLQLCTTYNRALV*