AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0440130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0440130 MtrunA17_Chr7g0263231 97.048 1084 30 2 99 1180 1 1084 0.0 2191
Msa0440130 MtrunA17_Chr7g0263261 78.976 1113 115 9 99 1180 1 1025 0.0 1731
Msa0440130 MtrunA17_Chr4g0003151 49.623 663 309 9 519 1168 13 663 0.0 650
Msa0440130 MtrunA17_Chr2g0333261 48.148 675 318 13 526 1180 34 696 0.0 621
Msa0440130 MtrunA17_Chr2g0308821 38.026 547 315 9 632 1165 124 659 1.28e-123 395
Msa0440130 MtrunA17_Chr8g0359341 31.571 681 423 11 512 1165 43 707 1.00e-115 376
Msa0440130 MtrunA17_Chr8g0354631 29.056 678 432 11 516 1165 47 703 3.17e-90 307
Msa0440130 MtrunA17_Chr4g0052681 29.490 529 364 6 642 1164 33 558 2.50e-76 264
Msa0440130 MtrunA17_Chr8g0383081 30.241 539 349 10 636 1164 29 550 3.31e-76 263
Msa0440130 MtrunA17_Chr5g0402891 30.165 547 353 11 637 1165 44 579 3.13e-74 259
Msa0440130 MtrunA17_Chr8g0383041 29.222 527 364 6 642 1164 34 555 6.38e-73 254
Msa0440130 MtrunA17_Chr8g0383211 27.952 669 403 18 526 1169 26 640 8.88e-63 227
Msa0440130 MtrunA17_Chr8g0383071 33.213 277 182 3 701 975 33 308 8.12e-47 170
Msa0440130 MtrunA17_Chr4g0053391 32.937 252 161 1 913 1164 1 244 1.49e-45 166
Msa0440130 MtrunA17_Chr4g0052601 27.617 449 291 7 501 942 1 422 8.22e-45 168
Msa0440130 MtrunA17_Chr4g0062411 25.225 666 413 23 525 1167 49 652 2.65e-44 172
Msa0440130 MtrunA17_Chr8g0383051 31.560 282 184 5 642 918 46 323 1.42e-38 147
Msa0440130 MtrunA17_Chr5g0408131 37.500 216 116 6 960 1169 20 222 5.24e-34 131
Msa0440130 MtrunA17_Chr4g0052611 35.681 213 119 5 957 1165 6 204 3.29e-30 120
Msa0440130 MtrunA17_Chr1g0192041 28.421 190 133 1 848 1037 47 233 2.56e-26 108
Msa0440130 MtrunA17_Chr8g0383061 31.455 213 119 6 963 1164 1 197 8.13e-21 92.8
Msa0440130 MtrunA17_Chr8g0390371 51.316 76 36 1 1097 1172 10 84 7.76e-18 79.7
Msa0440130 MtrunA17_Chr3g0108001 42.466 73 42 0 1092 1164 1 73 1.20e-16 77.0
Msa0440130 MtrunA17_Chr8g0383181 27.451 255 138 12 528 774 18 233 7.41e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0440130 AT3G42170.1 61.656 652 217 5 519 1164 50 674 0.0 871
Msa0440130 AT3G42170.2 61.656 652 217 5 519 1164 28 652 0.0 870
Msa0440130 AT1G18560.1 21.157 657 450 19 529 1167 46 652 2.72e-32 135

Find 307 sgRNAs with CRISPR-Local

Find 455 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGGCAATGTGCCGTTTA+AGG 0.157033 3_3:-6689453 None:intergenic
CTCTTACTTGGCTGTGTCTC+TGG 0.171385 3_3:-6689295 None:intergenic
TTCAACTGCGCTTGTGAAAA+TGG 0.184972 3_3:+6691235 Msa0440130:CDS
CTGCATTTCTGATTGGAATT+TGG 0.193112 3_3:+6689999 Msa0440130:CDS
CCCCTTGAACGTGGGGTATA+TGG 0.202727 3_3:-6689523 None:intergenic
GTAACATAAGAGTGATTATT+TGG 0.208361 3_3:+6691350 Msa0440130:three_prime_UTR
CATCAAGGACTACTTGTATT+AGG 0.218179 3_3:-6691450 None:intergenic
TTCAATGGTCAGTTGCTAAT+TGG 0.222525 3_3:+6690117 Msa0440130:CDS
TGGTTTGGTCATCAATAAAA+AGG 0.227762 3_3:-6690308 None:intergenic
CTTTGTAGAACTTGGAAATA+AGG 0.239509 3_3:-6687193 None:intergenic
TTACATTCTTTCATGAAGTT+TGG 0.253618 3_3:+6690529 Msa0440130:CDS
GTACATGACAGTCTCATTAT+TGG 0.258258 3_3:-6688771 None:intergenic
CAAGTTCTACAAAGCTAAAA+AGG 0.265781 3_3:+6687202 Msa0440130:CDS
GTATATGGGGCATGCTGATT+TGG 0.269732 3_3:-6689508 None:intergenic
CGTGGGGTGGAGTACTGTTT+AGG 0.281351 3_3:+6691651 Msa0440130:three_prime_UTR
GTTCCAGACTTTGATGTATT+AGG 0.284211 3_3:+6691005 Msa0440130:CDS
GTCTCCTTGAATAGTATTAA+AGG 0.286837 3_3:-6689746 None:intergenic
CCCAGCTCTTCTGCGTAGTT+TGG 0.289995 3_3:+6689483 Msa0440130:CDS
TAGGGAAAACTATGTGTCTT+TGG 0.296066 3_3:+6691670 Msa0440130:three_prime_UTR
AAAACCCGATAAGATCTAAT+TGG 0.296694 3_3:-6685350 None:intergenic
TCATTGTTGTGCTGTGCTTC+AGG 0.296894 3_3:-6688458 None:intergenic
CAAGATGGCCCGAGATATAT+TGG 0.306113 3_3:+6691067 Msa0440130:CDS
GGAACTTTGTTGTCAGATAA+TGG 0.316486 3_3:+6690888 Msa0440130:CDS
GGATCTTAAGGAACACCTTC+AGG 0.324716 3_3:+6690269 Msa0440130:CDS
CACAAGCGCAGTTGAAGATT+CGG 0.326854 3_3:-6691228 None:intergenic
TGAACTGGGGTTGCAGATTT+CGG 0.329740 3_3:-6689714 None:intergenic
TCCAGCGCTAACTGTTTCTA+TGG 0.333447 3_3:-6689353 None:intergenic
TGCAAGTGATTGTGGGGTAT+TGG 0.333800 3_3:-6689010 None:intergenic
AGAGAGAGAAAGAGAGAGAT+TGG 0.335408 3_3:-6685384 None:intergenic
ATGAGACATCATTTGGGAAT+TGG 0.336765 3_3:-6689131 None:intergenic
GTTGGGATCCATTGTAGAAT+TGG 0.339691 3_3:-6688918 None:intergenic
TGAAGTTTGGAAATTACATT+TGG 0.340740 3_3:+6690542 Msa0440130:CDS
CCCTTGAACGTGGGGTATAT+GGG 0.346574 3_3:-6689522 None:intergenic
GGTCATAATGAGACATCATT+TGG 0.356363 3_3:-6689138 None:intergenic
AGATTCAGTTGACTTATATC+TGG 0.356459 3_3:+6685488 Msa0440130:CDS
TCACAGAGAGTAGAGGTCTA+AGG 0.356710 3_3:-6690080 None:intergenic
TTGGTCCAATTAGATCTTAT+CGG 0.358499 3_3:+6685345 Msa0440130:CDS
AGTTTCCAGTCTGGAATAGA+TGG 0.359200 3_3:-6690426 None:intergenic
AGCATTTACTATTTCATAGC+TGG 0.361317 3_3:-6689242 None:intergenic
GGATAAATTCCTGGATCTTA+AGG 0.362197 3_3:+6690257 Msa0440130:CDS
GATGAGTTACCAGGACGTTT+TGG 0.364188 3_3:+6689817 Msa0440130:CDS
GAATGTTTGCTGCATCATAA+AGG 0.367171 3_3:-6690479 None:intergenic
TACATGACAGTCTCATTATT+GGG 0.368484 3_3:-6688770 None:intergenic
GAACAAACCACACCTTTGTT+TGG 0.368569 3_3:-6688371 None:intergenic
GTCTGAATTGGATCAGTATC+TGG 0.369969 3_3:+6690962 Msa0440130:CDS
CCATCAGACAAAGTCTGAAT+TGG 0.370844 3_3:+6690950 Msa0440130:CDS
TTTGTAGAACTTGGAAATAA+GGG 0.374574 3_3:-6687192 None:intergenic
TGGGAATTGGCTAGCTGATC+AGG 0.374885 3_3:-6689118 None:intergenic
TCACATATTTCACACTTTCC+CGG 0.376084 3_3:-6690215 None:intergenic
TAAAGGTCACCATGTTGAAC+TGG 0.379837 3_3:-6689729 None:intergenic
CAGTTAGCGCTGGATGTAGA+AGG 0.380601 3_3:+6689362 Msa0440130:CDS
TTGATATGTTGTATTCCATT+TGG 0.381932 3_3:-6690328 None:intergenic
AGTAGAACCTACCAACATAC+TGG 0.382265 3_3:-6691291 None:intergenic
ACCATACTGCATCCAGTCTT+TGG 0.385506 3_3:-6691201 None:intergenic
AATGTTTGCTGCATCATAAA+GGG 0.386549 3_3:-6690478 None:intergenic
TCTTACTTGGCTGTGTCTCT+GGG 0.386610 3_3:-6689294 None:intergenic
AGATGCTAGAACTAGTAAAT+AGG 0.388613 3_3:+6691416 Msa0440130:three_prime_UTR
TAGGCCGCGTCTCTCAAATT+TGG 0.389535 3_3:+6685326 None:intergenic
CTGGTACCAGCCACCTTAAA+CGG 0.390950 3_3:+6689440 Msa0440130:CDS
TCTGCATATGCCGGTGTTAG+TGG 0.394211 3_3:-6690819 None:intergenic
GATCTTGTAACCCAGGCTTC+TGG 0.395094 3_3:+6688173 Msa0440130:CDS
GGCGAGAGTGTTTCAGAGTT+AGG 0.395382 3_3:-6689097 None:intergenic
TCAGAAGGAACGGTAGAAAC+TGG 0.395592 3_3:-6691095 None:intergenic
TTGATGGGATAGCTGATTGT+TGG 0.403890 3_3:-6688936 None:intergenic
GCGGTTCTGTATCGTCGTTT+TGG 0.405020 3_3:-6689574 None:intergenic
ACAAGTGCCTCCACTGTCTC+TGG 0.406781 3_3:-6691173 None:intergenic
GATTATCAAGAATTTCTTGA+TGG 0.409862 3_3:-6688952 None:intergenic
ATCAAGGACTACTTGTATTA+GGG 0.412625 3_3:-6691449 None:intergenic
TTGCATCACCACCAGAAGCC+TGG 0.414501 3_3:-6688184 None:intergenic
GTGGGGTGGAGTACTGTTTA+GGG 0.416262 3_3:+6691652 Msa0440130:three_prime_UTR
TGGCAATTGTTGCAGGCATA+TGG 0.416336 3_3:+6687114 Msa0440130:intron
TTTGGTGATTGCTGTAGTTA+TGG 0.417358 3_3:+6690665 Msa0440130:CDS
AAGTCAACTGAATCTGAATC+TGG 0.417485 3_3:-6685480 None:intergenic
GAAACGCGGAACGGCGGTGC+CGG 0.420994 3_3:-6685458 None:intergenic
CGGACAAATGCAACAAATCC+TGG 0.422410 3_3:-6689694 None:intergenic
CAATATATCTCGGGCCATCT+TGG 0.422876 3_3:-6691066 None:intergenic
TCCAAACTACGCAGAAGAGC+TGG 0.425755 3_3:-6689484 None:intergenic
GATGGGGCTCCTTTGTAATC+AGG 0.426405 3_3:-6690408 None:intergenic
AGGATCAGAAGTGTCTAAAC+AGG 0.429136 3_3:-6690388 None:intergenic
GATGTAAAACAAGAGCTAAA+TGG 0.431357 3_3:+6688128 Msa0440130:CDS
TGATGGGATAGCTGATTGTT+GGG 0.433059 3_3:-6688935 None:intergenic
CCCCATATACCCCACGTTCA+AGG 0.434780 3_3:+6689521 Msa0440130:CDS
TGGTCCAATTAGATCTTATC+GGG 0.436544 3_3:+6685346 Msa0440130:CDS
CACCAAGTTGATCGCCGACT+TGG 0.436573 3_3:-6688274 None:intergenic
TCAATCTGATTTGTTCCATC+AGG 0.439224 3_3:+6691479 Msa0440130:three_prime_UTR
CATTTCTGATTGGAATTTGG+AGG 0.440108 3_3:+6690002 Msa0440130:CDS
TTTCGTACATGGGTTTAGTA+AGG 0.440600 3_3:-6690608 None:intergenic
TATCTGCCTGCATTTCTGAT+TGG 0.442754 3_3:+6689992 Msa0440130:CDS
CATACTCTTGCAAGTGATTG+TGG 0.444583 3_3:-6689018 None:intergenic
AGAATCGACCACATGGATGC+TGG 0.446532 3_3:-6688339 None:intergenic
TAGCTACTTCACCTTCTTCA+AGG 0.447217 3_3:-6688025 None:intergenic
CACTTGTGTGTGCCAAAGAC+TGG 0.449617 3_3:+6691189 Msa0440130:CDS
GTGACCTTTAATACTATTCA+AGG 0.449805 3_3:+6689742 Msa0440130:CDS
ATCACACGAGGATAAATTCC+TGG 0.450304 3_3:+6690248 Msa0440130:CDS
GAGAGATTGTAGTCTGGCTT+TGG 0.451885 3_3:+6690647 Msa0440130:CDS
GAGGCAGAAATCTGCAATGA+TGG 0.452316 3_3:+6688860 Msa0440130:CDS
CAACCTAATACATCAAAGTC+TGG 0.454049 3_3:-6691008 None:intergenic
AAGGCATTGTCAATAAAATC+CGG 0.454969 3_3:+6690196 Msa0440130:CDS
CTTCACATGGTTGAGCATCC+AGG 0.454995 3_3:+6689676 Msa0440130:CDS
CCCATATACCCCACGTTCAA+GGG 0.456337 3_3:+6689522 Msa0440130:CDS
GAAGTGTTTCATTATTTGCC+AGG 0.457268 3_3:-6689159 None:intergenic
AAGTGGCGGAAGCGAGATCT+TGG 0.458020 3_3:-6685408 None:intergenic
CGGAACGGCGGTGCCGGGAG+CGG 0.459306 3_3:-6685452 None:intergenic
ACTACGCAGAAGAGCTGGGC+AGG 0.459343 3_3:-6689479 None:intergenic
ATCTCAACAAGTTTCCAGTC+TGG 0.463011 3_3:-6690435 None:intergenic
ATGTTGTATTCCATTTGGTT+TGG 0.463820 3_3:-6690323 None:intergenic
ATGAAGATGGAAGGATCCTC+TGG 0.464092 3_3:+6690864 Msa0440130:CDS
GCATTTACTATTTCATAGCT+GGG 0.466040 3_3:-6689241 None:intergenic
TCGGAACCGAGCTGCGGAAG+TGG 0.467807 3_3:-6685425 None:intergenic
TACGCATCCGAACAGTCATC+TGG 0.468930 3_3:+6689042 Msa0440130:CDS
AAGAATCCACTTATCTTCAA+TGG 0.469596 3_3:+6690102 Msa0440130:CDS
GGTAGTGATTCAGAAATCTC+TGG 0.469638 3_3:-6688245 None:intergenic
ACAAGCGCAGTTGAAGATTC+GGG 0.470263 3_3:-6691227 None:intergenic
AGTACTGGTTCAAAAGTTGC+TGG 0.470825 3_3:+6689421 Msa0440130:CDS
GAAAATTATGTAAGGTGTGC+TGG 0.471775 3_3:-6689596 None:intergenic
CAGAGACACAGCCAAGTAAG+AGG 0.475117 3_3:+6689296 Msa0440130:CDS
CTGTGTCGCAACTTACTTGA+CGG 0.478704 3_3:+6689768 Msa0440130:CDS
CGGTTCCGAGCTTCCGCTCC+CGG 0.485671 3_3:+6685439 Msa0440130:CDS
GTCATAATGAGACATCATTT+GGG 0.487942 3_3:-6689137 None:intergenic
CAGGAATCAGCGTAAATTTG+AGG 0.488124 3_3:+6691498 Msa0440130:three_prime_UTR
CTGATTGGAATTTGGAGGGT+AGG 0.488233 3_3:+6690007 Msa0440130:CDS
TTTAGTAAGGTCGCTAATGA+AGG 0.488795 3_3:-6690595 None:intergenic
CAGACTTTGATGTATTAGGT+TGG 0.489968 3_3:+6691009 Msa0440130:CDS
CTTCCGCCACTTCCGCAGCT+CGG 0.492346 3_3:+6685419 Msa0440130:CDS
ATACTCTTGCAAGTGATTGT+GGG 0.493067 3_3:-6689017 None:intergenic
TGCATCACCACCAGAAGCCT+GGG 0.493824 3_3:-6688183 None:intergenic
CTGGAATAGCCAATATATCT+CGG 0.495577 3_3:-6691076 None:intergenic
ATGAAAGAATGTAATAGCAG+TGG 0.500974 3_3:-6690520 None:intergenic
ACGAAAAGATCGATAAGTAC+TGG 0.501066 3_3:+6690625 Msa0440130:CDS
TTTCCTTCTTCTGCATATGC+CGG 0.502177 3_3:-6690828 None:intergenic
ATGCAACATTGCTTAAAGTA+CGG 0.503617 3_3:-6690152 None:intergenic
AACTGACCATTGAAGATAAG+TGG 0.504675 3_3:-6690108 None:intergenic
AAACGCGGAACGGCGGTGCC+GGG 0.506242 3_3:-6685457 None:intergenic
GAGAGAGAAAGAGAGAGATT+GGG 0.507173 3_3:-6685383 None:intergenic
GAAGCACAGCACAACAATGA+AGG 0.508710 3_3:+6688461 Msa0440130:CDS
GAAGGTGTTCCTTAAGATCC+AGG 0.509466 3_3:-6690266 None:intergenic
CAAATTCCAATCAGAAATGC+AGG 0.510230 3_3:-6689998 None:intergenic
AACCAAGTCGGCGATCAACT+TGG 0.512138 3_3:+6688272 Msa0440130:CDS
AGACTTTGATGCCTACATCA+TGG 0.514193 3_3:+6690917 Msa0440130:CDS
CTGAGAGCAGAGTCAGACTC+AGG 0.514577 3_3:-6689961 None:intergenic
TGCAACATTGCTTAAAGTAC+GGG 0.515335 3_3:-6690151 None:intergenic
TCGGGCCATCTTGGAAAGTG+TGG 0.515342 3_3:-6691057 None:intergenic
TCTTGATCGAAAATTATGTA+AGG 0.516979 3_3:-6689604 None:intergenic
CAATTCAGACTTTGTCTGAT+GGG 0.517662 3_3:-6690949 None:intergenic
ATTATCAAGAATTTCTTGAT+GGG 0.519975 3_3:-6688951 None:intergenic
AAATTTACGCTGATTCCTGA+TGG 0.521810 3_3:-6691494 None:intergenic
AATTTGCGCCTCATGCAATA+CGG 0.522050 3_3:-6688816 None:intergenic
GCCAAAGACTGGATGCAGTA+TGG 0.522224 3_3:+6691200 Msa0440130:CDS
TTTACTGGGACTGCTCTCGT+GGG 0.522741 3_3:+6691634 Msa0440130:three_prime_UTR
GTAGAGGTCTAAGGTTCTCA+AGG 0.523026 3_3:-6690071 None:intergenic
AAAGGTCACCATGTTGAACT+GGG 0.524503 3_3:-6689728 None:intergenic
CGGTGCCGGGAGCGGAAGCT+CGG 0.524953 3_3:-6685444 None:intergenic
ACCATAGAAACAGTTAGCGC+TGG 0.526279 3_3:+6689352 Msa0440130:CDS
TTATTGATGACCAAACCAAA+TGG 0.526661 3_3:+6690313 Msa0440130:CDS
TGCTGGAAGCAATATGAAGA+TGG 0.526869 3_3:+6690851 Msa0440130:CDS
CCAATTCAGACTTTGTCTGA+TGG 0.528198 3_3:-6690950 None:intergenic
ACTTTGATGTATTAGGTTGG+TGG 0.532207 3_3:+6691012 Msa0440130:CDS
AGGCAGAAATCTGCAATGAT+GGG 0.532322 3_3:+6688861 Msa0440130:CDS
CGGGCCATCTTGGAAAGTGT+GGG 0.532592 3_3:-6691056 None:intergenic
CATCCATGTGGTCGATTCTG+AGG 0.532671 3_3:+6688343 Msa0440130:CDS
GACGATCAATGTCGACAAGA+TGG 0.533978 3_3:+6688070 Msa0440130:CDS
TTGGTCTGACACTGGATATG+TGG 0.534582 3_3:+6689836 Msa0440130:CDS
CACCACTTCCCCTTGAACGT+GGG 0.536001 3_3:-6689531 None:intergenic
GTTAACTTCTGTGCTTTCCA+AGG 0.537766 3_3:+6687149 Msa0440130:CDS
GAATTGGCTAACTCATTCTC+AGG 0.538505 3_3:-6688902 None:intergenic
GAATACAACATATCAAATGT+TGG 0.540376 3_3:+6690335 Msa0440130:CDS
AGACATTACCACCTCACTGA+TGG 0.540884 3_3:-6688675 None:intergenic
ACCCCACGTTCAAGGGGAAG+TGG 0.542848 3_3:+6689529 Msa0440130:CDS
CCGGTGTTAGTGGCAGAGGA+AGG 0.544115 3_3:-6690809 None:intergenic
GAGAATTCTCAATGTTGTGA+TGG 0.544510 3_3:+6689930 Msa0440130:CDS
TATGCAGAAGAAGGAAATGC+TGG 0.545470 3_3:+6690834 Msa0440130:CDS
CTTGTACCCAGTATGTTGGT+AGG 0.546002 3_3:+6691284 Msa0440130:three_prime_UTR
TGGAATAGCCAATATATCTC+GGG 0.548248 3_3:-6691075 None:intergenic
GTACTGGAGAGATTGTAGTC+TGG 0.548258 3_3:+6690641 Msa0440130:CDS
TGGATGCTCAACCATGTGAA+GGG 0.548561 3_3:-6689674 None:intergenic
TATGCCGGTGTTAGTGGCAG+AGG 0.549555 3_3:-6690813 None:intergenic
GAATCGACCACATGGATGCT+GGG 0.552885 3_3:-6688338 None:intergenic
GACATTACCACCTCACTGAT+GGG 0.555412 3_3:-6688674 None:intergenic
GTACCCCACACTTTCCAAGA+TGG 0.556211 3_3:+6691052 Msa0440130:CDS
CTCCACTGTCTCTGGACGCA+AGG 0.556363 3_3:-6691165 None:intergenic
TTTCAGAGTTAGGCAACTGA+TGG 0.556383 3_3:-6689087 None:intergenic
CCTTAAACGGCACATTGCCA+AGG 0.556626 3_3:+6689453 Msa0440130:CDS
GTTTCCAGTCTGGAATAGAT+GGG 0.557438 3_3:-6690425 None:intergenic
CTGGGACTGCTCTCGTGGGG+TGG 0.557542 3_3:+6691638 Msa0440130:three_prime_UTR
AACACTTCACAACAATCAGC+TGG 0.557702 3_3:+6689174 Msa0440130:CDS
CTTAAACGGCACATTGCCAA+GGG 0.557966 3_3:+6689454 Msa0440130:CDS
GTTGTCGTCATGAGATTGCT+AGG 0.559521 3_3:+6689629 Msa0440130:CDS
TCAAGGGCAACTTCAGTAAG+TGG 0.561947 3_3:-6690054 None:intergenic
GTAGGCTATGTATTTATCAC+GGG 0.561984 3_3:+6689874 Msa0440130:CDS
TGTAGGCTATGTATTTATCA+CGG 0.564616 3_3:+6689873 Msa0440130:CDS
TACACTTGTACCCAGTATGT+TGG 0.565021 3_3:+6691280 Msa0440130:three_prime_UTR
ACACCGGCATATGCAGAAGA+AGG 0.565672 3_3:+6690825 Msa0440130:CDS
TGAAAGAATGTAATAGCAGT+GGG 0.566230 3_3:-6690519 None:intergenic
TCAGATTGAGCTGCACATCA+AGG 0.567647 3_3:-6691465 None:intergenic
AAAGATAGAGTCAGAAGGAA+CGG 0.567707 3_3:-6691105 None:intergenic
TATCAAGCTGTGGAAAACCT+TGG 0.568184 3_3:-6687166 None:intergenic
AGCTACTTCACCTTCTTCAA+GGG 0.568719 3_3:-6688024 None:intergenic
AATGTGCCGTTTAAGGTGGC+TGG 0.572953 3_3:-6689446 None:intergenic
AGGCATATGGCAGTAGAAGA+AGG 0.575314 3_3:+6687127 Msa0440130:intron
GGTAGAAGTTTCCATGATGT+AGG 0.578747 3_3:-6690928 None:intergenic
TGATTGTCCAGATGACTGTT+CGG 0.578967 3_3:-6689049 None:intergenic
CTTTGAAGAAGACAAATTAG+CGG 0.579166 3_3:+6688097 Msa0440130:CDS
CATAAATGAGGAGGTTGCAT+CGG 0.579303 3_3:+6688508 Msa0440130:CDS
TCTGGACAATCATGAGGCAC+TGG 0.580433 3_3:+6689060 Msa0440130:CDS
CCAAACTACGCAGAAGAGCT+GGG 0.580595 3_3:-6689483 None:intergenic
GCAGGAGAGGATATACTGAC+AGG 0.580674 3_3:+6687994 Msa0440130:intron
CCTTGAACGTGGGGTATATG+GGG 0.581232 3_3:-6689521 None:intergenic
GGACTACTTGTATTAGGGAA+AGG 0.581639 3_3:-6691444 None:intergenic
GGTTGCAGCTTCTGAACTGA+AGG 0.581965 3_3:+6690356 Msa0440130:CDS
AAGCACAGCACAACAATGAA+GGG 0.583176 3_3:+6688462 Msa0440130:CDS
GAACCGAGCTGCGGAAGTGG+CGG 0.583231 3_3:-6685422 None:intergenic
CAGATAATAGTCTCATCAGT+GGG 0.583475 3_3:-6688575 None:intergenic
CTGGATGCTCAACCATGTGA+AGG 0.584734 3_3:-6689675 None:intergenic
AGGCATTGTCAATAAAATCC+GGG 0.586814 3_3:+6690197 Msa0440130:CDS
AGGATGGCTACCCTTGAAGA+AGG 0.589103 3_3:+6688014 Msa0440130:CDS
TGGGTTACAAGATCATTGCT+AGG 0.592212 3_3:-6688164 None:intergenic
AAAATCAGCACAACAATGAG+AGG 0.594608 3_3:+6688531 Msa0440130:CDS
GAGCCCCATCTATTCCAGAC+TGG 0.596543 3_3:+6690421 Msa0440130:CDS
TACTTGTATTAGGGAAAGGT+AGG 0.597758 3_3:-6691440 None:intergenic
GCACCACTTCCCCTTGAACG+TGG 0.598034 3_3:-6689532 None:intergenic
AGTGTCAGACCAAAACGTCC+TGG 0.599754 3_3:-6689826 None:intergenic
ATGTAGAAGGGCATGTTGCA+AGG 0.599805 3_3:+6689375 Msa0440130:CDS
ATTTCTGATTGGAATTTGGA+GGG 0.599904 3_3:+6690003 Msa0440130:CDS
GCAGAGTCAGACTCAGGGCA+TGG 0.600140 3_3:-6689955 None:intergenic
ATGCCTCAGAATCGACCACA+TGG 0.600176 3_3:-6688346 None:intergenic
ACATCAAAGTCTGGAACTCG+TGG 0.601311 3_3:-6690999 None:intergenic
TACTCTTGCAAGTGATTGTG+GGG 0.601406 3_3:-6689016 None:intergenic
TTATCAAAGATAGAGTCAGA+AGG 0.601438 3_3:-6691110 None:intergenic
CTTGTAACCCAGGCTTCTGG+TGG 0.604952 3_3:+6688176 Msa0440130:CDS
TGAAGCACAACACATAAATG+AGG 0.607694 3_3:+6688496 Msa0440130:CDS
CGGTGTTAGTGGCAGAGGAA+GGG 0.608414 3_3:-6690808 None:intergenic
ATGGGGTTGCATCTGAAGCT+CGG 0.608998 3_3:+6688879 Msa0440130:CDS
GGAAGCAATATGAAGATGGA+AGG 0.610164 3_3:+6690855 Msa0440130:CDS
TTCCTTGCGTCCAGAGACAG+TGG 0.610328 3_3:+6691163 Msa0440130:CDS
TAGAGGTCTAAGGTTCTCAA+GGG 0.612496 3_3:-6690070 None:intergenic
ATGTTTGCTGCATCATAAAG+GGG 0.614314 3_3:-6690477 None:intergenic
ACAGCACAGCAATGAGGATG+CGG 0.617098 3_3:+6688433 Msa0440130:CDS
CCATATACCCCACGTTCAAG+GGG 0.617486 3_3:+6689523 Msa0440130:CDS
ACCACTTCCCCTTGAACGTG+GGG 0.618044 3_3:-6689530 None:intergenic
CCTTCCTCTGCCACTAACAC+CGG 0.618365 3_3:+6690809 Msa0440130:CDS
TGGTGGTGATGCAAATGTGT+TGG 0.620176 3_3:+6688193 Msa0440130:CDS
TTAGTAAGGTCGCTAATGAA+GGG 0.622144 3_3:-6690594 None:intergenic
TTTGTCAAGATTGTTGATGA+CGG 0.623110 3_3:+6690756 Msa0440130:CDS
TGGACCTCAAGTCAATCTGT+AGG 0.623873 3_3:+6689856 Msa0440130:CDS
GGAAGCTCGGAACCGAGCTG+CGG 0.624865 3_3:-6685431 None:intergenic
TGGACCAAATTTGAGAGACG+CGG 0.625828 3_3:-6685330 None:intergenic
AGTTAGCGCTGGATGTAGAA+GGG 0.626392 3_3:+6689363 Msa0440130:CDS
GAGAGGATATACTGACAGGA+TGG 0.629895 3_3:+6687998 Msa0440130:CDS
TAGCAATGATCTTGTAACCC+AGG 0.630916 3_3:+6688166 Msa0440130:CDS
GGATGCTCAACCATGTGAAG+GGG 0.631155 3_3:-6689673 None:intergenic
TGGCAATGTGCCGTTTAAGG+TGG 0.632744 3_3:-6689450 None:intergenic
TGAGAGCAGAGTCAGACTCA+GGG 0.633449 3_3:-6689960 None:intergenic
GGATTCTTCACAGAGAGTAG+AGG 0.636348 3_3:-6690087 None:intergenic
GTAGAACCTACCAACATACT+GGG 0.638697 3_3:-6691290 None:intergenic
TAATGAGACCGTATTGCATG+AGG 0.638850 3_3:+6688808 Msa0440130:CDS
AGACACAGCCAAGTAAGAGG+AGG 0.639336 3_3:+6689299 Msa0440130:CDS
GATGCTGGGTGGTGCCTCAG+TGG 0.640560 3_3:-6688324 None:intergenic
TCTGAGGCATCGCCAAACAA+AGG 0.641062 3_3:+6688359 Msa0440130:CDS
CTTACTTGGCTGTGTCTCTG+GGG 0.642263 3_3:-6689293 None:intergenic
CGATGAAGCTGTCATGCACG+AGG 0.643150 3_3:+6688841 Msa0440130:CDS
TGAGTTAGCCAATTCTACAA+TGG 0.644535 3_3:+6688910 Msa0440130:CDS
TTAAACGGCACATTGCCAAG+GGG 0.646090 3_3:+6689455 Msa0440130:CDS
ATAAGGGCAATATCAAGCTG+TGG 0.646903 3_3:-6687176 None:intergenic
TTACTGGGACTGCTCTCGTG+GGG 0.650251 3_3:+6691635 Msa0440130:three_prime_UTR
GGGGCTTCAAGTATGTGCAA+AGG 0.651165 3_3:-6690458 None:intergenic
GGCAGAAATCTGCAATGATG+GGG 0.652193 3_3:+6688862 Msa0440130:CDS
AAATCAGCACAACAATGAGA+GGG 0.653205 3_3:+6688532 Msa0440130:CDS
CTGAATCTGGAAACGCGGAA+CGG 0.654262 3_3:-6685467 None:intergenic
GATGCTCAACCATGTGAAGG+GGG 0.658296 3_3:-6689672 None:intergenic
AGCACAGCCCATCAGTGAGG+TGG 0.661112 3_3:+6688667 Msa0440130:CDS
AATGATGTCTCATTATGACC+TGG 0.663857 3_3:+6689141 Msa0440130:CDS
ACAAGCTTCATCTTGAAACG+AGG 0.665126 3_3:-6690690 None:intergenic
GAATCAGCGTAAATTTGAGG+TGG 0.665261 3_3:+6691501 Msa0440130:three_prime_UTR
TCTGCAACCCCAGTTCAACA+TGG 0.665327 3_3:+6689720 Msa0440130:CDS
ACTTCTGATCCTGATTACAA+AGG 0.667473 3_3:+6690399 Msa0440130:CDS
TGAACCACATTGTGATGATG+AGG 0.667703 3_3:+6688631 Msa0440130:CDS
AGCACAACACATAAATGAGG+AGG 0.669807 3_3:+6688499 Msa0440130:CDS
GGGCCATCTTGGAAAGTGTG+GGG 0.669815 3_3:-6691055 None:intergenic
ACAGATAATAGTCTCATCAG+TGG 0.670892 3_3:-6688576 None:intergenic
TAAACGGCACATTGCCAAGG+GGG 0.671843 3_3:+6689456 Msa0440130:CDS
GATTTGTTGAGCTCAGCACA+AGG 0.675538 3_3:+6690177 Msa0440130:CDS
TGAATCTGAATCTGGAAACG+CGG 0.676868 3_3:-6685472 None:intergenic
AGCACAGCACAACAATGAAG+GGG 0.678121 3_3:+6688463 Msa0440130:CDS
AATCTGGAAACGCGGAACGG+CGG 0.678556 3_3:-6685464 None:intergenic
TTTCCAGTCTGGAATAGATG+GGG 0.680285 3_3:-6690424 None:intergenic
GGCATCGCCAAACAAAGGTG+TGG 0.680897 3_3:+6688364 Msa0440130:CDS
AATTATGTAAGGTGTGCTGG+CGG 0.684019 3_3:-6689593 None:intergenic
GGCACCACCCAGCATCCATG+TGG 0.684942 3_3:+6688331 Msa0440130:CDS
CAGTCATCTGGACAATCATG+AGG 0.685159 3_3:+6689054 Msa0440130:CDS
TGACAACAAAGTTCCTCCAG+AGG 0.688757 3_3:-6690880 None:intergenic
AAGGTCACCATGTTGAACTG+GGG 0.690139 3_3:-6689727 None:intergenic
TGAAGCACAGCACAACAATG+AGG 0.693045 3_3:+6688598 Msa0440130:CDS
ATAGCCTACAGATTGACTTG+AGG 0.693367 3_3:-6689860 None:intergenic
TGAAACACAGCACAGCAATG+AGG 0.694362 3_3:+6688427 Msa0440130:CDS
ACCACATTGTGATGATGAGG+TGG 0.696189 3_3:+6688634 Msa0440130:CDS
AGCACAGCACAACAATGAGG+AGG 0.697162 3_3:+6688601 Msa0440130:CDS
AAGATGGAAGGATCCTCTGG+AGG 0.706666 3_3:+6690867 Msa0440130:CDS
TAATGAGACTGTCATGTACG+AGG 0.707494 3_3:+6688775 Msa0440130:CDS
TGACTCACAGCAGAACAATG+TGG 0.718584 3_3:+6688697 Msa0440130:CDS
TGAAGCACAGCCCATCAGTG+AGG 0.722715 3_3:+6688664 Msa0440130:CDS
AATGCAGACAAGTAATGATG+TGG 0.730823 3_3:+6688397 Msa0440130:CDS
TGATTCGCAGCCGAGCAGTG+AGG 0.731515 3_3:+6688727 Msa0440130:CDS
CTTGCGTCCAGAGACAGTGG+AGG 0.735351 3_3:+6691166 Msa0440130:CDS
ACCACCTCATCATCACAATG+TGG 0.740305 3_3:-6688635 None:intergenic
TCGACCACATGGATGCTGGG+TGG 0.771726 3_3:-6688335 None:intergenic
TCTTGACAAGTCTACCACTG+AGG 0.786307 3_3:+6688310 Msa0440130:CDS
GAAGACTTCAGAATCACACG+AGG 0.794926 3_3:+6690236 Msa0440130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAATAATTAATAA+TGG - chr3_3:6687961-6687980 None:intergenic 0.0%
!!! AATTATTATTTTTTTTTTTT+TGG + chr3_3:6687966-6687985 Msa0440130:intron 0.0%
!!! ATTATTATTTTTTTTTTTTT+GGG + chr3_3:6687967-6687986 Msa0440130:intron 0.0%
!!! TTATTCTTTTCATTATTTTA+TGG + chr3_3:6686423-6686442 Msa0440130:intron 10.0%
!!! TATTCTTTTCATTATTTTAT+GGG + chr3_3:6686424-6686443 Msa0440130:intron 10.0%
!!! GTTAAATATAACTTATTTTA+TGG + chr3_3:6687094-6687113 Msa0440130:intron 10.0%
!! TAAAAATATGAAGAATTACT+TGG - chr3_3:6685590-6685609 None:intergenic 15.0%
!! AGAATATTATTATCAGAAAA+TGG - chr3_3:6685969-6685988 None:intergenic 15.0%
!! AATGTATTATGTATATATGT+TGG - chr3_3:6686288-6686307 None:intergenic 15.0%
!! AACAATAATTATCTATTGTT+TGG - chr3_3:6686344-6686363 None:intergenic 15.0%
!! AATAATGAAAAGAATAAACA+AGG - chr3_3:6686420-6686439 None:intergenic 15.0%
!!! ATTCTTTTCATTATTTTATG+GGG + chr3_3:6686425-6686444 Msa0440130:intron 15.0%
!! ACATGAATATATTAGTAATT+TGG + chr3_3:6686618-6686637 Msa0440130:intron 15.0%
!! ATATATTAGTAATTTGGTAT+AGG + chr3_3:6686624-6686643 Msa0440130:intron 15.0%
!!! ATACTATAAATAACGAATTT+TGG + chr3_3:6687627-6687646 Msa0440130:intron 15.0%
!!! TACTATAAATAACGAATTTT+GGG + chr3_3:6687628-6687647 Msa0440130:intron 15.0%
!! ACATGAAAAAAAAAAAATAC+AGG - chr3_3:6687893-6687912 None:intergenic 15.0%
!!! TATTTTTTTTTTTTCATGTG+AGG + chr3_3:6687894-6687913 Msa0440130:intron 15.0%
!! ATATAATCTGTTACATTACA+TGG + chr3_3:6685774-6685793 Msa0440130:intron 20.0%
!!! ATTTGATCTATTTTACTGTT+GGG + chr3_3:6685805-6685824 Msa0440130:intron 20.0%
!!! GATTGGATTTATTTTCTTAA+TGG + chr3_3:6686052-6686071 Msa0440130:intron 20.0%
!! ATGGATGAATATATTGAATT+TGG + chr3_3:6686071-6686090 Msa0440130:intron 20.0%
!!! AAACTATGCACTAATATTTT+TGG - chr3_3:6686216-6686235 None:intergenic 20.0%
!! AGTATTGTTAGTCAAATTTA+GGG - chr3_3:6686494-6686513 None:intergenic 20.0%
!! TAGTATTGTTAGTCAAATTT+AGG - chr3_3:6686495-6686514 None:intergenic 20.0%
!! TCAAAATAAAACATGAACAA+TGG - chr3_3:6686520-6686539 None:intergenic 20.0%
!! TACAAATCAATTATAACAGA+GGG + chr3_3:6686574-6686593 Msa0440130:intron 20.0%
!! ATATATTCATGTTCATATTG+AGG - chr3_3:6686610-6686629 None:intergenic 20.0%
!! AACATGTACTTTAGATTATA+TGG - chr3_3:6686918-6686937 None:intergenic 20.0%
!!! TTATTTTATATTGCATGTGT+GGG + chr3_3:6687326-6687345 Msa0440130:intron 20.0%
!! TTAGTGTTTATAGAATTGTT+TGG + chr3_3:6687500-6687519 Msa0440130:intron 20.0%
!! ATTGTCAAAGAAAAATAACA+AGG - chr3_3:6687684-6687703 None:intergenic 20.0%
!!! CATGCTTTATTTGAATTTAT+TGG + chr3_3:6687784-6687803 Msa0440130:intron 20.0%
!! TCATTATTTATTTCCAAATG+TGG + chr3_3:6687836-6687855 Msa0440130:intron 20.0%
!! AATTAAACATATACCACATT+TGG - chr3_3:6687852-6687871 None:intergenic 20.0%
!! ATTATCAAGAATTTCTTGAT+GGG - chr3_3:6688954-6688973 None:intergenic 20.0%
!!! ACTCATCAAAATATTTTGAA+AGG - chr3_3:6689804-6689823 None:intergenic 20.0%
!!! TTTTTATTTGGTGATTTTAC+TGG + chr3_3:6691619-6691638 Msa0440130:three_prime_UTR 20.0%
!!! TTTTATTTGGTGATTTTACT+GGG + chr3_3:6691620-6691639 Msa0440130:three_prime_UTR 20.0%
!! GATTTGATCTATTTTACTGT+TGG + chr3_3:6685804-6685823 Msa0440130:intron 25.0%
! TGTTTATGATATAGTTGTAC+AGG + chr3_3:6685897-6685916 Msa0440130:intron 25.0%
!!! CTTATTTGCTCTTTTGATTT+TGG + chr3_3:6685997-6686016 Msa0440130:intron 25.0%
! TAAATCCAATCAAAACAAGA+TGG - chr3_3:6686043-6686062 None:intergenic 25.0%
! ATATGTGCATTATCAACTAT+TGG - chr3_3:6686148-6686167 None:intergenic 25.0%
!!! ATAGTGTGAGCTTTAAATTT+AGG - chr3_3:6686316-6686335 None:intergenic 25.0%
! AATATTGTGAGAGACAAAAT+TGG - chr3_3:6686551-6686570 None:intergenic 25.0%
! GTACAAATCAATTATAACAG+AGG + chr3_3:6686573-6686592 Msa0440130:intron 25.0%
!!! AAAAAAGTTGATGTACAACT+TGG - chr3_3:6686680-6686699 None:intergenic 25.0%
! ATAGCATAGTTATTACTTCA+TGG - chr3_3:6686791-6686810 None:intergenic 25.0%
! AAATTTGTGCAATTGAAATG+TGG - chr3_3:6686815-6686834 None:intergenic 25.0%
!!! TTTATAATGGTTGATGAAGA+TGG + chr3_3:6686871-6686890 Msa0440130:intron 25.0%
!!! AAGTCAAATTTGCTTAGTTT+TGG + chr3_3:6687072-6687091 Msa0440130:intron 25.0%
! TTTGTAGAACTTGGAAATAA+GGG - chr3_3:6687195-6687214 None:intergenic 25.0%
! CAATATAAAATAACCCTTGA+GGG - chr3_3:6687319-6687338 None:intergenic 25.0%
!!! GTTATTTTATATTGCATGTG+TGG + chr3_3:6687325-6687344 Msa0440130:intron 25.0%
! TGCACTATAGTAAATCTTAA+GGG + chr3_3:6687567-6687586 Msa0440130:intron 25.0%
! ATTCGTTATTTATAGTATCC+AGG - chr3_3:6687625-6687644 None:intergenic 25.0%
! TTTACAGTTACAATTAAGTG+AGG - chr3_3:6687935-6687954 None:intergenic 25.0%
!!! TTTTTTTTTTTGGGTAAAGC+AGG + chr3_3:6687976-6687995 Msa0440130:intron 25.0%
! GATTATCAAGAATTTCTTGA+TGG - chr3_3:6688955-6688974 None:intergenic 25.0%
! TCTTGATCGAAAATTATGTA+AGG - chr3_3:6689607-6689626 None:intergenic 25.0%
!!! AAATATTTTGATGAGTTACC+AGG + chr3_3:6689808-6689827 Msa0440130:CDS 25.0%
! TTGATATGTTGTATTCCATT+TGG - chr3_3:6690331-6690350 None:intergenic 25.0%
! GAATACAACATATCAAATGT+TGG + chr3_3:6690335-6690354 Msa0440130:CDS 25.0%
! TTACATTCTTTCATGAAGTT+TGG + chr3_3:6690529-6690548 Msa0440130:CDS 25.0%
! TGAAGTTTGGAAATTACATT+TGG + chr3_3:6690542-6690561 Msa0440130:CDS 25.0%
! TTCAGTTTCACAAAAATCTA+CGG + chr3_3:6690717-6690736 Msa0440130:CDS 25.0%
! GTAACATAAGAGTGATTATT+TGG + chr3_3:6691350-6691369 Msa0440130:three_prime_UTR 25.0%
!!! TTGCCATTGGTTTTTTTATT+TGG + chr3_3:6691607-6691626 Msa0440130:three_prime_UTR 25.0%
! TCACCAAATAAAAAAACCAA+TGG - chr3_3:6691613-6691632 None:intergenic 25.0%
TTGGTCCAATTAGATCTTAT+CGG + chr3_3:6685345-6685364 Msa0440130:CDS 30.0%
AAAACCCGATAAGATCTAAT+TGG - chr3_3:6685353-6685372 None:intergenic 30.0%
! AGATTCAGTTGACTTATATC+TGG + chr3_3:6685488-6685507 Msa0440130:CDS 30.0%
ATTACTTGGACACAATTTCA+AGG - chr3_3:6685576-6685595 None:intergenic 30.0%
! TTTAACTTTCACGTTTGTGT+TGG + chr3_3:6685606-6685625 Msa0440130:intron 30.0%
! CTTTTCGTTCTTATTCAACT+GGG + chr3_3:6685828-6685847 Msa0440130:intron 30.0%
TGATATAGTTGTACAGGAAA+TGG + chr3_3:6685903-6685922 Msa0440130:intron 30.0%
GATTAGAATGTAGTGTGTTT+AGG + chr3_3:6685925-6685944 Msa0440130:intron 30.0%
!!! TGATACCATCTTGTTTTGAT+TGG + chr3_3:6686035-6686054 Msa0440130:intron 30.0%
!! TGCAGTGTTATCTTTTGATT+TGG + chr3_3:6686115-6686134 Msa0440130:intron 30.0%
! TAGTCAAATTTAGGGTTCAA+CGG - chr3_3:6686486-6686505 None:intergenic 30.0%
ATTAGTAATTTGGTATAGGC+TGG + chr3_3:6686628-6686647 Msa0440130:intron 30.0%
TTAGTAATTTGGTATAGGCT+GGG + chr3_3:6686629-6686648 Msa0440130:intron 30.0%
GATATAGTCAGTGAGTAAAT+GGG + chr3_3:6686651-6686670 Msa0440130:intron 30.0%
CAATAGATAATTAACCTGTC+CGG + chr3_3:6686765-6686784 Msa0440130:intron 30.0%
! TCTGTTCAGCTGATTTATAA+TGG + chr3_3:6686858-6686877 Msa0440130:intron 30.0%
ACTATCAGCAAATACAAACA+CGG - chr3_3:6686970-6686989 None:intergenic 30.0%
! TGTATTTGCTGATAGTTTGT+TGG + chr3_3:6686974-6686993 Msa0440130:intron 30.0%
CTAACAATGATAGTAAGACA+CGG - chr3_3:6687031-6687050 None:intergenic 30.0%
! TATTTTATGGCAATTGTTGC+AGG + chr3_3:6687107-6687126 Msa0440130:intron 30.0%
CTTTGTAGAACTTGGAAATA+AGG - chr3_3:6687196-6687215 None:intergenic 30.0%
!!! CTTTTTAGCTTTGTAGAACT+TGG - chr3_3:6687204-6687223 None:intergenic 30.0%
CAAGTTCTACAAAGCTAAAA+AGG + chr3_3:6687202-6687221 Msa0440130:CDS 30.0%
TCTACAAAGCTAAAAAGGTA+AGG + chr3_3:6687207-6687226 Msa0440130:intron 30.0%
CTACAAAGCTAAAAAGGTAA+GGG + chr3_3:6687208-6687227 Msa0440130:intron 30.0%
GCAATATAAAATAACCCTTG+AGG - chr3_3:6687320-6687339 None:intergenic 30.0%
TGTGATCATGTGCATATTTA+AGG + chr3_3:6687400-6687419 Msa0440130:intron 30.0%
!! AAAGTTGATGCATTGCATTT+GGG + chr3_3:6687423-6687442 Msa0440130:intron 30.0%
AAGATTTACTATAGTGCAGT+AGG - chr3_3:6687565-6687584 None:intergenic 30.0%
CTGCACTATAGTAAATCTTA+AGG + chr3_3:6687566-6687585 Msa0440130:intron 30.0%
AGTAAACCAAAATATACACC+TGG + chr3_3:6687604-6687623 Msa0440130:intron 30.0%
! TAGTATCCAGGTGTATATTT+TGG - chr3_3:6687613-6687632 None:intergenic 30.0%
ATGAATAAACCATGCACATA+TGG - chr3_3:6687726-6687745 None:intergenic 30.0%
!! GAATTTATTGGTTTGTGCTT+TGG + chr3_3:6687796-6687815 Msa0440130:intron 30.0%
! CTTTGAAGAAGACAAATTAG+CGG + chr3_3:6688097-6688116 Msa0440130:CDS 30.0%
!!! TAGCTCTTGTTTTACATCAT+GGG - chr3_3:6688126-6688145 None:intergenic 30.0%
!!! TTAGCTCTTGTTTTACATCA+TGG - chr3_3:6688127-6688146 None:intergenic 30.0%
GATGTAAAACAAGAGCTAAA+TGG + chr3_3:6688128-6688147 Msa0440130:CDS 30.0%
!! CTCATTTTTCTGACATTCTT+TGG - chr3_3:6688225-6688244 None:intergenic 30.0%
TACATGACAGTCTCATTATT+GGG - chr3_3:6688773-6688792 None:intergenic 30.0%
GTCATAATGAGACATCATTT+GGG - chr3_3:6689140-6689159 None:intergenic 30.0%
GCATTTACTATTTCATAGCT+GGG - chr3_3:6689244-6689263 None:intergenic 30.0%
AGCATTTACTATTTCATAGC+TGG - chr3_3:6689245-6689264 None:intergenic 30.0%
!!! TTTTTTTTCCTCCTCTTACT+TGG - chr3_3:6689310-6689329 None:intergenic 30.0%
GTGACCTTTAATACTATTCA+AGG + chr3_3:6689742-6689761 Msa0440130:CDS 30.0%
GTCTCCTTGAATAGTATTAA+AGG - chr3_3:6689749-6689768 None:intergenic 30.0%
TGTAGGCTATGTATTTATCA+CGG + chr3_3:6689873-6689892 Msa0440130:CDS 30.0%
ATTTCTGATTGGAATTTGGA+GGG + chr3_3:6690003-6690022 Msa0440130:CDS 30.0%
AAGAATCCACTTATCTTCAA+TGG + chr3_3:6690102-6690121 Msa0440130:CDS 30.0%
ATGCAACATTGCTTAAAGTA+CGG - chr3_3:6690155-6690174 None:intergenic 30.0%
!! AAGGCATTGTCAATAAAATC+CGG + chr3_3:6690196-6690215 Msa0440130:CDS 30.0%
! ATAAAAAGGCTCTTTTCACT+GGG - chr3_3:6690297-6690316 None:intergenic 30.0%
! AATAAAAAGGCTCTTTTCAC+TGG - chr3_3:6690298-6690317 None:intergenic 30.0%
!! TGGTTTGGTCATCAATAAAA+AGG - chr3_3:6690311-6690330 None:intergenic 30.0%
! TTATTGATGACCAAACCAAA+TGG + chr3_3:6690313-6690332 Msa0440130:CDS 30.0%
ATGTTGTATTCCATTTGGTT+TGG - chr3_3:6690326-6690345 None:intergenic 30.0%
! AATGTTTGCTGCATCATAAA+GGG - chr3_3:6690481-6690500 None:intergenic 30.0%
TGAAAGAATGTAATAGCAGT+GGG - chr3_3:6690522-6690541 None:intergenic 30.0%
ATGAAAGAATGTAATAGCAG+TGG - chr3_3:6690523-6690542 None:intergenic 30.0%
! TTATCGATCTTTTCGTACAT+GGG - chr3_3:6690621-6690640 None:intergenic 30.0%
! TTTGTCAAGATTGTTGATGA+CGG + chr3_3:6690756-6690775 Msa0440130:CDS 30.0%
TTATCAAAGATAGAGTCAGA+AGG - chr3_3:6691113-6691132 None:intergenic 30.0%
TGATAAAAAGAGCAAAGAGA+TGG + chr3_3:6691127-6691146 Msa0440130:CDS 30.0%
AGATGCTAGAACTAGTAAAT+AGG + chr3_3:6691416-6691435 Msa0440130:three_prime_UTR 30.0%
ATCAAGGACTACTTGTATTA+GGG - chr3_3:6691452-6691471 None:intergenic 30.0%
TGGTCCAATTAGATCTTATC+GGG + chr3_3:6685346-6685365 Msa0440130:CDS 35.0%
AAGTCAACTGAATCTGAATC+TGG - chr3_3:6685483-6685502 None:intergenic 35.0%
! ATTATGTCATTTGCGAACTC+TGG + chr3_3:6685738-6685757 Msa0440130:intron 35.0%
! TTATGTCATTTGCGAACTCT+GGG + chr3_3:6685739-6685758 Msa0440130:intron 35.0%
TGTTACATTACATGGAGTCA+TGG + chr3_3:6685782-6685801 Msa0440130:intron 35.0%
! GCTTTTCGTTCTTATTCAAC+TGG + chr3_3:6685827-6685846 Msa0440130:intron 35.0%
! AGTGCATAGTTTCTCTTTTC+TGG + chr3_3:6686224-6686243 Msa0440130:intron 35.0%
TATAATGAGCTTGATCACCA+AGG + chr3_3:6686247-6686266 Msa0440130:intron 35.0%
CTGTATGCATAGATTCAGAA+TGG + chr3_3:6686367-6686386 Msa0440130:intron 35.0%
GGATATAGTCAGTGAGTAAA+TGG + chr3_3:6686650-6686669 Msa0440130:intron 35.0%
ATGTAGAACAAGTGCAAACA+AGG - chr3_3:6686744-6686763 None:intergenic 35.0%
CATAGTTATTACTTCATGGC+CGG - chr3_3:6686787-6686806 None:intergenic 35.0%
! GCAAATACAAACACGGATTA+TGG - chr3_3:6686963-6686982 None:intergenic 35.0%
! TGATAGTAAGACACGGATTA+TGG - chr3_3:6687024-6687043 None:intergenic 35.0%
!! ATTCTGCTATGGTTGTTTTC+TGG + chr3_3:6687247-6687266 Msa0440130:intron 35.0%
!! TTCTGCTATGGTTGTTTTCT+GGG + chr3_3:6687248-6687267 Msa0440130:intron 35.0%
!! GAAAGTTGATGCATTGCATT+TGG + chr3_3:6687422-6687441 Msa0440130:intron 35.0%
! TCGTCTCATCTTTTACATCA+GGG - chr3_3:6688055-6688074 None:intergenic 35.0%
! ATCGTCTCATCTTTTACATC+AGG - chr3_3:6688056-6688075 None:intergenic 35.0%
AATGCAGACAAGTAATGATG+TGG + chr3_3:6688397-6688416 Msa0440130:CDS 35.0%
TGAAGCACAACACATAAATG+AGG + chr3_3:6688496-6688515 Msa0440130:CDS 35.0%
AAAATCAGCACAACAATGAG+AGG + chr3_3:6688531-6688550 Msa0440130:CDS 35.0%
AAATCAGCACAACAATGAGA+GGG + chr3_3:6688532-6688551 Msa0440130:CDS 35.0%
CAGATAATAGTCTCATCAGT+GGG - chr3_3:6688578-6688597 None:intergenic 35.0%
ACAGATAATAGTCTCATCAG+TGG - chr3_3:6688579-6688598 None:intergenic 35.0%
GTACATGACAGTCTCATTAT+TGG - chr3_3:6688774-6688793 None:intergenic 35.0%
TGAGTTAGCCAATTCTACAA+TGG + chr3_3:6688910-6688929 Msa0440130:CDS 35.0%
ATACTCTTGCAAGTGATTGT+GGG - chr3_3:6689020-6689039 None:intergenic 35.0%
ATGAGACATCATTTGGGAAT+TGG - chr3_3:6689134-6689153 None:intergenic 35.0%
GGTCATAATGAGACATCATT+TGG - chr3_3:6689141-6689160 None:intergenic 35.0%
AATGATGTCTCATTATGACC+TGG + chr3_3:6689141-6689160 Msa0440130:CDS 35.0%
! GAAGTGTTTCATTATTTGCC+AGG - chr3_3:6689162-6689181 None:intergenic 35.0%
! AACTTTTGAACCAGTACTGT+AGG - chr3_3:6689419-6689438 None:intergenic 35.0%
GAAAATTATGTAAGGTGTGC+TGG - chr3_3:6689599-6689618 None:intergenic 35.0%
GTAGGCTATGTATTTATCAC+GGG + chr3_3:6689874-6689893 Msa0440130:CDS 35.0%
!!! GACATTTTGTTGATAGTGAC+TGG + chr3_3:6689896-6689915 Msa0440130:CDS 35.0%
GAGAATTCTCAATGTTGTGA+TGG + chr3_3:6689930-6689949 Msa0440130:CDS 35.0%
CAAATTCCAATCAGAAATGC+AGG - chr3_3:6690001-6690020 None:intergenic 35.0%
CTGCATTTCTGATTGGAATT+TGG + chr3_3:6689999-6690018 Msa0440130:CDS 35.0%
CATTTCTGATTGGAATTTGG+AGG + chr3_3:6690002-6690021 Msa0440130:CDS 35.0%
AACTGACCATTGAAGATAAG+TGG - chr3_3:6690111-6690130 None:intergenic 35.0%
TTCAATGGTCAGTTGCTAAT+TGG + chr3_3:6690117-6690136 Msa0440130:CDS 35.0%
TGCAACATTGCTTAAAGTAC+GGG - chr3_3:6690154-6690173 None:intergenic 35.0%
! AGGCATTGTCAATAAAATCC+GGG + chr3_3:6690197-6690216 Msa0440130:CDS 35.0%
TCACATATTTCACACTTTCC+CGG - chr3_3:6690218-6690237 None:intergenic 35.0%
GGATAAATTCCTGGATCTTA+AGG + chr3_3:6690257-6690276 Msa0440130:CDS 35.0%
ACTTCTGATCCTGATTACAA+AGG + chr3_3:6690399-6690418 Msa0440130:CDS 35.0%
! ATGTTTGCTGCATCATAAAG+GGG - chr3_3:6690480-6690499 None:intergenic 35.0%
! GAATGTTTGCTGCATCATAA+AGG - chr3_3:6690482-6690501 None:intergenic 35.0%
TTAGTAAGGTCGCTAATGAA+GGG - chr3_3:6690597-6690616 None:intergenic 35.0%
TTTAGTAAGGTCGCTAATGA+AGG - chr3_3:6690598-6690617 None:intergenic 35.0%
TTTCGTACATGGGTTTAGTA+AGG - chr3_3:6690611-6690630 None:intergenic 35.0%
! CTTATCGATCTTTTCGTACA+TGG - chr3_3:6690622-6690641 None:intergenic 35.0%
ACGAAAAGATCGATAAGTAC+TGG + chr3_3:6690625-6690644 Msa0440130:CDS 35.0%
! TTTGGTGATTGCTGTAGTTA+TGG + chr3_3:6690665-6690684 Msa0440130:CDS 35.0%
! GGAACTTTGTTGTCAGATAA+TGG + chr3_3:6690888-6690907 Msa0440130:CDS 35.0%
CAATTCAGACTTTGTCTGAT+GGG - chr3_3:6690952-6690971 None:intergenic 35.0%
GTTCCAGACTTTGATGTATT+AGG + chr3_3:6691005-6691024 Msa0440130:CDS 35.0%
CAACCTAATACATCAAAGTC+TGG - chr3_3:6691011-6691030 None:intergenic 35.0%
CAGACTTTGATGTATTAGGT+TGG + chr3_3:6691009-6691028 Msa0440130:CDS 35.0%
!! ACTTTGATGTATTAGGTTGG+TGG + chr3_3:6691012-6691031 Msa0440130:CDS 35.0%
TGGAATAGCCAATATATCTC+GGG - chr3_3:6691078-6691097 None:intergenic 35.0%
CTGGAATAGCCAATATATCT+CGG - chr3_3:6691079-6691098 None:intergenic 35.0%
AAAGATAGAGTCAGAAGGAA+CGG - chr3_3:6691108-6691127 None:intergenic 35.0%
TACTTGTATTAGGGAAAGGT+AGG - chr3_3:6691443-6691462 None:intergenic 35.0%
CATCAAGGACTACTTGTATT+AGG - chr3_3:6691453-6691472 None:intergenic 35.0%
!! TCAATCTGATTTGTTCCATC+AGG + chr3_3:6691479-6691498 Msa0440130:three_prime_UTR 35.0%
!! AAATTTACGCTGATTCCTGA+TGG - chr3_3:6691497-6691516 None:intergenic 35.0%
TAGGGAAAACTATGTGTCTT+TGG + chr3_3:6691670-6691689 Msa0440130:three_prime_UTR 35.0%
GAGAGAGAAAGAGAGAGATT+GGG - chr3_3:6685386-6685405 None:intergenic 40.0%
AGAGAGAGAAAGAGAGAGAT+TGG - chr3_3:6685387-6685406 None:intergenic 40.0%
TGAATCTGAATCTGGAAACG+CGG - chr3_3:6685475-6685494 None:intergenic 40.0%
GAAACTAGTAAGAACGATCG+CGG + chr3_3:6685653-6685672 Msa0440130:intron 40.0%
AAACTAGTAAGAACGATCGC+GGG + chr3_3:6685654-6685673 Msa0440130:intron 40.0%
GTCTCAATAGTCAATGAGCA+AGG - chr3_3:6686456-6686475 None:intergenic 40.0%
GTTAACTTCTGTGCTTTCCA+AGG + chr3_3:6687149-6687168 Msa0440130:CDS 40.0%
TATCAAGCTGTGGAAAACCT+TGG - chr3_3:6687169-6687188 None:intergenic 40.0%
ATAAGGGCAATATCAAGCTG+TGG - chr3_3:6687179-6687198 None:intergenic 40.0%
!!! TTTTTTGGGTAAAGCAGGAG+AGG + chr3_3:6687981-6688000 Msa0440130:intron 40.0%
AGCTACTTCACCTTCTTCAA+GGG - chr3_3:6688027-6688046 None:intergenic 40.0%
TAGCTACTTCACCTTCTTCA+AGG - chr3_3:6688028-6688047 None:intergenic 40.0%
! CGTCTCATCTTTTACATCAG+GGG - chr3_3:6688054-6688073 None:intergenic 40.0%
TGGGTTACAAGATCATTGCT+AGG - chr3_3:6688167-6688186 None:intergenic 40.0%
TAGCAATGATCTTGTAACCC+AGG + chr3_3:6688166-6688185 Msa0440130:CDS 40.0%
GGTAGTGATTCAGAAATCTC+TGG - chr3_3:6688248-6688267 None:intergenic 40.0%
TCACTACCCAAAAACCAAGT+CGG + chr3_3:6688260-6688279 Msa0440130:CDS 40.0%
GAACAAACCACACCTTTGTT+TGG - chr3_3:6688374-6688393 None:intergenic 40.0%
AAGCACAGCACAACAATGAA+GGG + chr3_3:6688462-6688481 Msa0440130:CDS 40.0%
AGCACAACACATAAATGAGG+AGG + chr3_3:6688499-6688518 Msa0440130:CDS 40.0%
CATAAATGAGGAGGTTGCAT+CGG + chr3_3:6688508-6688527 Msa0440130:CDS 40.0%
! TGAACCACATTGTGATGATG+AGG + chr3_3:6688631-6688650 Msa0440130:CDS 40.0%
GAAAAAACTACCTCACTGCT+CGG - chr3_3:6688740-6688759 None:intergenic 40.0%
TAATGAGACTGTCATGTACG+AGG + chr3_3:6688775-6688794 Msa0440130:CDS 40.0%
TAATGAGACCGTATTGCATG+AGG + chr3_3:6688808-6688827 Msa0440130:CDS 40.0%
AATTTGCGCCTCATGCAATA+CGG - chr3_3:6688819-6688838 None:intergenic 40.0%
AGGCAGAAATCTGCAATGAT+GGG + chr3_3:6688861-6688880 Msa0440130:CDS 40.0%
GAATTGGCTAACTCATTCTC+AGG - chr3_3:6688905-6688924 None:intergenic 40.0%
GTTGGGATCCATTGTAGAAT+TGG - chr3_3:6688921-6688940 None:intergenic 40.0%
TGATGGGATAGCTGATTGTT+GGG - chr3_3:6688938-6688957 None:intergenic 40.0%
TTGATGGGATAGCTGATTGT+TGG - chr3_3:6688939-6688958 None:intergenic 40.0%
TACTCTTGCAAGTGATTGTG+GGG - chr3_3:6689019-6689038 None:intergenic 40.0%
CATACTCTTGCAAGTGATTG+TGG - chr3_3:6689021-6689040 None:intergenic 40.0%
TGATTGTCCAGATGACTGTT+CGG - chr3_3:6689052-6689071 None:intergenic 40.0%
TTTCAGAGTTAGGCAACTGA+TGG - chr3_3:6689090-6689109 None:intergenic 40.0%
AACACTTCACAACAATCAGC+TGG + chr3_3:6689174-6689193 Msa0440130:CDS 40.0%
! CAAACTTTTGCCTACAGTAC+TGG + chr3_3:6689406-6689425 Msa0440130:CDS 40.0%
!! AGTACTGGTTCAAAAGTTGC+TGG + chr3_3:6689421-6689440 Msa0440130:CDS 40.0%
AATTATGTAAGGTGTGCTGG+CGG - chr3_3:6689596-6689615 None:intergenic 40.0%
AAAGGTCACCATGTTGAACT+GGG - chr3_3:6689731-6689750 None:intergenic 40.0%
TAAAGGTCACCATGTTGAAC+TGG - chr3_3:6689732-6689751 None:intergenic 40.0%
!! ATAGCCTACAGATTGACTTG+AGG - chr3_3:6689863-6689882 None:intergenic 40.0%
TATCTGCCTGCATTTCTGAT+TGG + chr3_3:6689992-6690011 Msa0440130:CDS 40.0%
! TAGAGGTCTAAGGTTCTCAA+GGG - chr3_3:6690073-6690092 None:intergenic 40.0%
ATCACACGAGGATAAATTCC+TGG + chr3_3:6690248-6690267 Msa0440130:CDS 40.0%
!! AGGATCAGAAGTGTCTAAAC+AGG - chr3_3:6690391-6690410 None:intergenic 40.0%
! TTTCCAGTCTGGAATAGATG+GGG - chr3_3:6690427-6690446 None:intergenic 40.0%
! GTTTCCAGTCTGGAATAGAT+GGG - chr3_3:6690428-6690447 None:intergenic 40.0%
! AGTTTCCAGTCTGGAATAGA+TGG - chr3_3:6690429-6690448 None:intergenic 40.0%
ATCTCAACAAGTTTCCAGTC+TGG - chr3_3:6690438-6690457 None:intergenic 40.0%
ACAAGCTTCATCTTGAAACG+AGG - chr3_3:6690693-6690712 None:intergenic 40.0%
TTTCACAAAAATCTACGGCG+AGG + chr3_3:6690722-6690741 Msa0440130:CDS 40.0%
TTTCCTTCTTCTGCATATGC+CGG - chr3_3:6690831-6690850 None:intergenic 40.0%
TATGCAGAAGAAGGAAATGC+TGG + chr3_3:6690834-6690853 Msa0440130:CDS 40.0%
TGCTGGAAGCAATATGAAGA+TGG + chr3_3:6690851-6690870 Msa0440130:CDS 40.0%
GGAAGCAATATGAAGATGGA+AGG + chr3_3:6690855-6690874 Msa0440130:CDS 40.0%
AGACTTTGATGCCTACATCA+TGG + chr3_3:6690917-6690936 Msa0440130:CDS 40.0%
GGTAGAAGTTTCCATGATGT+AGG - chr3_3:6690931-6690950 None:intergenic 40.0%
CCAATTCAGACTTTGTCTGA+TGG - chr3_3:6690953-6690972 None:intergenic 40.0%
CCATCAGACAAAGTCTGAAT+TGG + chr3_3:6690950-6690969 Msa0440130:CDS 40.0%
GTCTGAATTGGATCAGTATC+TGG + chr3_3:6690962-6690981 Msa0440130:CDS 40.0%
TTCAACTGCGCTTGTGAAAA+TGG + chr3_3:6691235-6691254 Msa0440130:CDS 40.0%
TACACTTGTACCCAGTATGT+TGG + chr3_3:6691280-6691299 Msa0440130:three_prime_UTR 40.0%
GTAGAACCTACCAACATACT+GGG - chr3_3:6691293-6691312 None:intergenic 40.0%
AGTAGAACCTACCAACATAC+TGG - chr3_3:6691294-6691313 None:intergenic 40.0%
GGACTACTTGTATTAGGGAA+AGG - chr3_3:6691447-6691466 None:intergenic 40.0%
CAGGAATCAGCGTAAATTTG+AGG + chr3_3:6691498-6691517 Msa0440130:three_prime_UTR 40.0%
GAATCAGCGTAAATTTGAGG+TGG + chr3_3:6691501-6691520 Msa0440130:three_prime_UTR 40.0%
TGGACCAAATTTGAGAGACG+CGG - chr3_3:6685333-6685352 None:intergenic 45.0%
! CCATTGCAGCAACGTTTTGT+CGG - chr3_3:6685859-6685878 None:intergenic 45.0%
GAGCTTGATCACCAAGGTAA+TGG + chr3_3:6686253-6686272 Msa0440130:intron 45.0%
!! CACCAAGGTAATGGACAATG+AGG + chr3_3:6686262-6686281 Msa0440130:intron 45.0%
TTATTACTTCATGGCCGGAC+AGG - chr3_3:6686782-6686801 None:intergenic 45.0%
TGGCAATTGTTGCAGGCATA+TGG + chr3_3:6687114-6687133 Msa0440130:intron 45.0%
AGGCATATGGCAGTAGAAGA+AGG + chr3_3:6687127-6687146 Msa0440130:intron 45.0%
TGTGAAGCATGTAACCCTCA+AGG + chr3_3:6687302-6687321 Msa0440130:intron 45.0%
GTGAAGCATGTAACCCTCAA+GGG + chr3_3:6687303-6687322 Msa0440130:intron 45.0%
TACCACTACTATCGTGTCTC+TGG + chr3_3:6687657-6687676 Msa0440130:intron 45.0%
ACCACTACTATCGTGTCTCT+GGG + chr3_3:6687658-6687677 Msa0440130:intron 45.0%
AGTTCAGTGCCATATGTGCA+TGG + chr3_3:6687714-6687733 Msa0440130:intron 45.0%
GAGAGGATATACTGACAGGA+TGG + chr3_3:6687998-6688017 Msa0440130:CDS 45.0%
GACGATCAATGTCGACAAGA+TGG + chr3_3:6688070-6688089 Msa0440130:CDS 45.0%
! TGGTGGTGATGCAAATGTGT+TGG + chr3_3:6688193-6688212 Msa0440130:CDS 45.0%
!!! TGATCGCCGACTTGGTTTTT+GGG - chr3_3:6688269-6688288 None:intergenic 45.0%
!!! TTGATCGCCGACTTGGTTTT+TGG - chr3_3:6688270-6688289 None:intergenic 45.0%
TCTTGACAAGTCTACCACTG+AGG + chr3_3:6688310-6688329 Msa0440130:CDS 45.0%
TGAAACACAGCACAGCAATG+AGG + chr3_3:6688427-6688446 Msa0440130:CDS 45.0%
TCATTGTTGTGCTGTGCTTC+AGG - chr3_3:6688461-6688480 None:intergenic 45.0%
GAAGCACAGCACAACAATGA+AGG + chr3_3:6688461-6688480 Msa0440130:CDS 45.0%
AGCACAGCACAACAATGAAG+GGG + chr3_3:6688463-6688482 Msa0440130:CDS 45.0%
TGAAGCACAGCACAACAATG+AGG + chr3_3:6688460-6688479 Msa0440130:CDS 45.0%
! ACCACATTGTGATGATGAGG+TGG + chr3_3:6688634-6688653 Msa0440130:CDS 45.0%
ACCACCTCATCATCACAATG+TGG - chr3_3:6688638-6688657 None:intergenic 45.0%
GACATTACCACCTCACTGAT+GGG - chr3_3:6688677-6688696 None:intergenic 45.0%
AGACATTACCACCTCACTGA+TGG - chr3_3:6688678-6688697 None:intergenic 45.0%
TGACTCACAGCAGAACAATG+TGG + chr3_3:6688697-6688716 Msa0440130:CDS 45.0%
GAGGCAGAAATCTGCAATGA+TGG + chr3_3:6688860-6688879 Msa0440130:CDS 45.0%
GGCAGAAATCTGCAATGATG+GGG + chr3_3:6688862-6688881 Msa0440130:CDS 45.0%
TGCAAGTGATTGTGGGGTAT+TGG - chr3_3:6689013-6689032 None:intergenic 45.0%
CAGTCATCTGGACAATCATG+AGG + chr3_3:6689054-6689073 Msa0440130:CDS 45.0%
TCTTACTTGGCTGTGTCTCT+GGG - chr3_3:6689297-6689316 None:intergenic 45.0%
ACCATAGAAACAGTTAGCGC+TGG + chr3_3:6689352-6689371 Msa0440130:CDS 45.0%
!! TCCAGCGCTAACTGTTTCTA+TGG - chr3_3:6689356-6689375 None:intergenic 45.0%
! AGTTAGCGCTGGATGTAGAA+GGG + chr3_3:6689363-6689382 Msa0440130:CDS 45.0%
! ATGTAGAAGGGCATGTTGCA+AGG + chr3_3:6689375-6689394 Msa0440130:CDS 45.0%
CTTAAACGGCACATTGCCAA+GGG + chr3_3:6689454-6689473 Msa0440130:CDS 45.0%
TTAAACGGCACATTGCCAAG+GGG + chr3_3:6689455-6689474 Msa0440130:CDS 45.0%
! GTATATGGGGCATGCTGATT+TGG - chr3_3:6689511-6689530 None:intergenic 45.0%
GTTGTCGTCATGAGATTGCT+AGG + chr3_3:6689629-6689648 Msa0440130:CDS 45.0%
TGGATGCTCAACCATGTGAA+GGG - chr3_3:6689677-6689696 None:intergenic 45.0%
CGGACAAATGCAACAAATCC+TGG - chr3_3:6689697-6689716 None:intergenic 45.0%
TGAACTGGGGTTGCAGATTT+CGG - chr3_3:6689717-6689736 None:intergenic 45.0%
AAGGTCACCATGTTGAACTG+GGG - chr3_3:6689730-6689749 None:intergenic 45.0%
CTGTGTCGCAACTTACTTGA+CGG + chr3_3:6689768-6689787 Msa0440130:CDS 45.0%
! GATGAGTTACCAGGACGTTT+TGG + chr3_3:6689817-6689836 Msa0440130:CDS 45.0%
TTGGTCTGACACTGGATATG+TGG + chr3_3:6689836-6689855 Msa0440130:CDS 45.0%
TGGACCTCAAGTCAATCTGT+AGG + chr3_3:6689856-6689875 Msa0440130:CDS 45.0%
CTGATTGGAATTTGGAGGGT+AGG + chr3_3:6690007-6690026 Msa0440130:CDS 45.0%
TCAAGGGCAACTTCAGTAAG+TGG - chr3_3:6690057-6690076 None:intergenic 45.0%
! GTAGAGGTCTAAGGTTCTCA+AGG - chr3_3:6690074-6690093 None:intergenic 45.0%
TCACAGAGAGTAGAGGTCTA+AGG - chr3_3:6690083-6690102 None:intergenic 45.0%
GGATTCTTCACAGAGAGTAG+AGG - chr3_3:6690090-6690109 None:intergenic 45.0%
!! GATTTGTTGAGCTCAGCACA+AGG + chr3_3:6690177-6690196 Msa0440130:CDS 45.0%
GAAGACTTCAGAATCACACG+AGG + chr3_3:6690236-6690255 Msa0440130:CDS 45.0%
!! GAAGGTGTTCCTTAAGATCC+AGG - chr3_3:6690269-6690288 None:intergenic 45.0%
GGATCTTAAGGAACACCTTC+AGG + chr3_3:6690269-6690288 Msa0440130:CDS 45.0%
! TCTTTTCACTGGGAACCTGA+AGG - chr3_3:6690287-6690306 None:intergenic 45.0%
GTACTGGAGAGATTGTAGTC+TGG + chr3_3:6690641-6690660 Msa0440130:CDS 45.0%
! GAGAGATTGTAGTCTGGCTT+TGG + chr3_3:6690647-6690666 Msa0440130:CDS 45.0%
ATGAAGATGGAAGGATCCTC+TGG + chr3_3:6690864-6690883 Msa0440130:CDS 45.0%
TGACAACAAAGTTCCTCCAG+AGG - chr3_3:6690883-6690902 None:intergenic 45.0%
! ACATCAAAGTCTGGAACTCG+TGG - chr3_3:6691002-6691021 None:intergenic 45.0%
CAATATATCTCGGGCCATCT+TGG - chr3_3:6691069-6691088 None:intergenic 45.0%
CAAGATGGCCCGAGATATAT+TGG + chr3_3:6691067-6691086 Msa0440130:CDS 45.0%
TCAGAAGGAACGGTAGAAAC+TGG - chr3_3:6691098-6691117 None:intergenic 45.0%
ACCATACTGCATCCAGTCTT+TGG - chr3_3:6691204-6691223 None:intergenic 45.0%
ACAAGCGCAGTTGAAGATTC+GGG - chr3_3:6691230-6691249 None:intergenic 45.0%
CACAAGCGCAGTTGAAGATT+CGG - chr3_3:6691231-6691250 None:intergenic 45.0%
CTTGTACCCAGTATGTTGGT+AGG + chr3_3:6691284-6691303 Msa0440130:three_prime_UTR 45.0%
TCAGATTGAGCTGCACATCA+AGG - chr3_3:6691468-6691487 None:intergenic 45.0%
! GCACACTTTTGCTTTGCCAT+TGG + chr3_3:6691594-6691613 Msa0440130:three_prime_UTR 45.0%
CTGAATCTGGAAACGCGGAA+CGG - chr3_3:6685470-6685489 None:intergenic 50.0%
! GCAGCAACGTTTTGTCGGAT+AGG - chr3_3:6685854-6685873 None:intergenic 50.0%
CCGACAAAACGTTGCTGCAA+TGG + chr3_3:6685856-6685875 Msa0440130:intron 50.0%
GGCCTCATTGTCCATTACCT+TGG - chr3_3:6686267-6686286 None:intergenic 50.0%
CGAGCACATGCATTCTGCTA+TGG + chr3_3:6687236-6687255 Msa0440130:intron 50.0%
GCAGGAGAGGATATACTGAC+AGG + chr3_3:6687994-6688013 Msa0440130:intron 50.0%
AGGATGGCTACCCTTGAAGA+AGG + chr3_3:6688014-6688033 Msa0440130:CDS 50.0%
GATCTTGTAACCCAGGCTTC+TGG + chr3_3:6688173-6688192 Msa0440130:CDS 50.0%
AACCAAGTCGGCGATCAACT+TGG + chr3_3:6688272-6688291 Msa0440130:CDS 50.0%
GAATCGACCACATGGATGCT+GGG - chr3_3:6688341-6688360 None:intergenic 50.0%
AGAATCGACCACATGGATGC+TGG - chr3_3:6688342-6688361 None:intergenic 50.0%
! CATCCATGTGGTCGATTCTG+AGG + chr3_3:6688343-6688362 Msa0440130:CDS 50.0%
ATGCCTCAGAATCGACCACA+TGG - chr3_3:6688349-6688368 None:intergenic 50.0%
!! TCTGAGGCATCGCCAAACAA+AGG + chr3_3:6688359-6688378 Msa0440130:CDS 50.0%
ACAGCACAGCAATGAGGATG+CGG + chr3_3:6688433-6688452 Msa0440130:CDS 50.0%
AGCACAGCACAACAATGAGG+AGG + chr3_3:6688601-6688620 Msa0440130:CDS 50.0%
! ATGGGGTTGCATCTGAAGCT+CGG + chr3_3:6688879-6688898 Msa0440130:CDS 50.0%
TACGCATCCGAACAGTCATC+TGG + chr3_3:6689042-6689061 Msa0440130:CDS 50.0%
TCTGGACAATCATGAGGCAC+TGG + chr3_3:6689060-6689079 Msa0440130:CDS 50.0%
!! GGCGAGAGTGTTTCAGAGTT+AGG - chr3_3:6689100-6689119 None:intergenic 50.0%
! TGGGAATTGGCTAGCTGATC+AGG - chr3_3:6689121-6689140 None:intergenic 50.0%
CTTACTTGGCTGTGTCTCTG+GGG - chr3_3:6689296-6689315 None:intergenic 50.0%
CTCTTACTTGGCTGTGTCTC+TGG - chr3_3:6689298-6689317 None:intergenic 50.0%
CAGAGACACAGCCAAGTAAG+AGG + chr3_3:6689296-6689315 Msa0440130:CDS 50.0%
AGACACAGCCAAGTAAGAGG+AGG + chr3_3:6689299-6689318 Msa0440130:CDS 50.0%
! CAGTTAGCGCTGGATGTAGA+AGG + chr3_3:6689362-6689381 Msa0440130:CDS 50.0%
CTGGTACCAGCCACCTTAAA+CGG + chr3_3:6689440-6689459 Msa0440130:CDS 50.0%
!! AATGTGCCGTTTAAGGTGGC+TGG - chr3_3:6689449-6689468 None:intergenic 50.0%
!! TGGCAATGTGCCGTTTAAGG+TGG - chr3_3:6689453-6689472 None:intergenic 50.0%
!! CCTTGGCAATGTGCCGTTTA+AGG - chr3_3:6689456-6689475 None:intergenic 50.0%
CCTTAAACGGCACATTGCCA+AGG + chr3_3:6689453-6689472 Msa0440130:CDS 50.0%
TAAACGGCACATTGCCAAGG+GGG + chr3_3:6689456-6689475 Msa0440130:CDS 50.0%
CCAAACTACGCAGAAGAGCT+GGG - chr3_3:6689486-6689505 None:intergenic 50.0%
TCCAAACTACGCAGAAGAGC+TGG - chr3_3:6689487-6689506 None:intergenic 50.0%
CCTTGAACGTGGGGTATATG+GGG - chr3_3:6689524-6689543 None:intergenic 50.0%
CCCTTGAACGTGGGGTATAT+GGG - chr3_3:6689525-6689544 None:intergenic 50.0%
CCCATATACCCCACGTTCAA+GGG + chr3_3:6689522-6689541 Msa0440130:CDS 50.0%
CCATATACCCCACGTTCAAG+GGG + chr3_3:6689523-6689542 Msa0440130:CDS 50.0%
! GCGGTTCTGTATCGTCGTTT+TGG - chr3_3:6689577-6689596 None:intergenic 50.0%
GCATGATTACCCCCTTCACA+TGG + chr3_3:6689663-6689682 Msa0440130:CDS 50.0%
GATGCTCAACCATGTGAAGG+GGG - chr3_3:6689675-6689694 None:intergenic 50.0%
GGATGCTCAACCATGTGAAG+GGG - chr3_3:6689676-6689695 None:intergenic 50.0%
CTGGATGCTCAACCATGTGA+AGG - chr3_3:6689678-6689697 None:intergenic 50.0%
CTTCACATGGTTGAGCATCC+AGG + chr3_3:6689676-6689695 Msa0440130:CDS 50.0%
TCTGCAACCCCAGTTCAACA+TGG + chr3_3:6689720-6689739 Msa0440130:CDS 50.0%
AGTGTCAGACCAAAACGTCC+TGG - chr3_3:6689829-6689848 None:intergenic 50.0%
!! AGGACGTTTTGGTCTGACAC+TGG + chr3_3:6689828-6689847 Msa0440130:CDS 50.0%
TGAGAGCAGAGTCAGACTCA+GGG - chr3_3:6689963-6689982 None:intergenic 50.0%
GGTTGCAGCTTCTGAACTGA+AGG + chr3_3:6690356-6690375 Msa0440130:CDS 50.0%
GATGGGGCTCCTTTGTAATC+AGG - chr3_3:6690411-6690430 None:intergenic 50.0%
GGGGCTTCAAGTATGTGCAA+AGG - chr3_3:6690461-6690480 None:intergenic 50.0%
! TCTGCATATGCCGGTGTTAG+TGG - chr3_3:6690822-6690841 None:intergenic 50.0%
ACACCGGCATATGCAGAAGA+AGG + chr3_3:6690825-6690844 Msa0440130:CDS 50.0%
AAGATGGAAGGATCCTCTGG+AGG + chr3_3:6690867-6690886 Msa0440130:CDS 50.0%
GTACCCCACACTTTCCAAGA+TGG + chr3_3:6691052-6691071 Msa0440130:CDS 50.0%
CACTTGTGTGTGCCAAAGAC+TGG + chr3_3:6691189-6691208 Msa0440130:CDS 50.0%
GCCAAAGACTGGATGCAGTA+TGG + chr3_3:6691200-6691219 Msa0440130:CDS 50.0%
! TTTTACTGGGACTGCTCTCG+TGG + chr3_3:6691633-6691652 Msa0440130:three_prime_UTR 50.0%
TTTACTGGGACTGCTCTCGT+GGG + chr3_3:6691634-6691653 Msa0440130:three_prime_UTR 50.0%
!! GTGGGGTGGAGTACTGTTTA+GGG + chr3_3:6691652-6691671 Msa0440130:three_prime_UTR 50.0%
! AAGTGGCGGAAGCGAGATCT+TGG - chr3_3:6685411-6685430 None:intergenic 55.0%
AATCTGGAAACGCGGAACGG+CGG - chr3_3:6685467-6685486 None:intergenic 55.0%
GCCCAGAGACACGATAGTAG+TGG - chr3_3:6687662-6687681 None:intergenic 55.0%
CTTGTAACCCAGGCTTCTGG+TGG + chr3_3:6688176-6688195 Msa0440130:CDS 55.0%
TGCATCACCACCAGAAGCCT+GGG - chr3_3:6688186-6688205 None:intergenic 55.0%
TTGCATCACCACCAGAAGCC+TGG - chr3_3:6688187-6688206 None:intergenic 55.0%
!! CACCAAGTTGATCGCCGACT+TGG - chr3_3:6688277-6688296 None:intergenic 55.0%
GGCATCGCCAAACAAAGGTG+TGG + chr3_3:6688364-6688383 Msa0440130:CDS 55.0%
TGAAGCACAGCCCATCAGTG+AGG + chr3_3:6688664-6688683 Msa0440130:CDS 55.0%
CGATGAAGCTGTCATGCACG+AGG + chr3_3:6688841-6688860 Msa0440130:CDS 55.0%
CCCAGCTCTTCTGCGTAGTT+TGG + chr3_3:6689483-6689502 Msa0440130:CDS 55.0%
CCCCATATACCCCACGTTCA+AGG + chr3_3:6689521-6689540 Msa0440130:CDS 55.0%
CCCCTTGAACGTGGGGTATA+TGG - chr3_3:6689526-6689545 None:intergenic 55.0%
ACCACTTCCCCTTGAACGTG+GGG - chr3_3:6689533-6689552 None:intergenic 55.0%
CACCACTTCCCCTTGAACGT+GGG - chr3_3:6689534-6689553 None:intergenic 55.0%
CTGAGAGCAGAGTCAGACTC+AGG - chr3_3:6689964-6689983 None:intergenic 55.0%
GAGCCCCATCTATTCCAGAC+TGG + chr3_3:6690421-6690440 Msa0440130:CDS 55.0%
! CGGTGTTAGTGGCAGAGGAA+GGG - chr3_3:6690811-6690830 None:intergenic 55.0%
CCTTCCTCTGCCACTAACAC+CGG + chr3_3:6690809-6690828 Msa0440130:CDS 55.0%
! TATGCCGGTGTTAGTGGCAG+AGG - chr3_3:6690816-6690835 None:intergenic 55.0%
! GGGCCATCTTGGAAAGTGTG+GGG - chr3_3:6691058-6691077 None:intergenic 55.0%
! CGGGCCATCTTGGAAAGTGT+GGG - chr3_3:6691059-6691078 None:intergenic 55.0%
TCGGGCCATCTTGGAAAGTG+TGG - chr3_3:6691060-6691079 None:intergenic 55.0%
TTCCTTGCGTCCAGAGACAG+TGG + chr3_3:6691163-6691182 Msa0440130:CDS 55.0%
ACAAGTGCCTCCACTGTCTC+TGG - chr3_3:6691176-6691195 None:intergenic 55.0%
TTACTGGGACTGCTCTCGTG+GGG + chr3_3:6691635-6691654 Msa0440130:three_prime_UTR 55.0%
!! CGTGGGGTGGAGTACTGTTT+AGG + chr3_3:6691651-6691670 Msa0440130:three_prime_UTR 55.0%
TCGACCACATGGATGCTGGG+TGG - chr3_3:6688338-6688357 None:intergenic 60.0%
AGCACAGCCCATCAGTGAGG+TGG + chr3_3:6688667-6688686 Msa0440130:CDS 60.0%
TGATTCGCAGCCGAGCAGTG+AGG + chr3_3:6688727-6688746 Msa0440130:CDS 60.0%
ACTACGCAGAAGAGCTGGGC+AGG - chr3_3:6689482-6689501 None:intergenic 60.0%
ACCCCACGTTCAAGGGGAAG+TGG + chr3_3:6689529-6689548 Msa0440130:CDS 60.0%
GCACCACTTCCCCTTGAACG+TGG - chr3_3:6689535-6689554 None:intergenic 60.0%
GCAGAGTCAGACTCAGGGCA+TGG - chr3_3:6689958-6689977 None:intergenic 60.0%
! CCGGTGTTAGTGGCAGAGGA+AGG - chr3_3:6690812-6690831 None:intergenic 60.0%
CTCCACTGTCTCTGGACGCA+AGG - chr3_3:6691168-6691187 None:intergenic 60.0%
CTTGCGTCCAGAGACAGTGG+AGG + chr3_3:6691166-6691185 Msa0440130:CDS 60.0%
CTTCCGCCACTTCCGCAGCT+CGG + chr3_3:6685419-6685438 Msa0440130:CDS 65.0%
GAACCGAGCTGCGGAAGTGG+CGG - chr3_3:6685425-6685444 None:intergenic 65.0%
TCGGAACCGAGCTGCGGAAG+TGG - chr3_3:6685428-6685447 None:intergenic 65.0%
GGAAGCTCGGAACCGAGCTG+CGG - chr3_3:6685434-6685453 None:intergenic 65.0%
GATGCTGGGTGGTGCCTCAG+TGG - chr3_3:6688327-6688346 None:intergenic 65.0%
GGCACCACCCAGCATCCATG+TGG + chr3_3:6688331-6688350 Msa0440130:CDS 65.0%
CGGTTCCGAGCTTCCGCTCC+CGG + chr3_3:6685439-6685458 Msa0440130:CDS 70.0%
AAACGCGGAACGGCGGTGCC+GGG - chr3_3:6685460-6685479 None:intergenic 70.0%
GAAACGCGGAACGGCGGTGC+CGG - chr3_3:6685461-6685480 None:intergenic 70.0%
AAGAGCTGGGCAGGCCCCCT+TGG - chr3_3:6689473-6689492 None:intergenic 70.0%
CTGGGACTGCTCTCGTGGGG+TGG + chr3_3:6691638-6691657 Msa0440130:three_prime_UTR 70.0%
! CGGTGCCGGGAGCGGAAGCT+CGG - chr3_3:6685447-6685466 None:intergenic 75.0%
!! CGGAACGGCGGTGCCGGGAG+CGG - chr3_3:6685455-6685474 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 6685330 6691693 6685330 ID=Msa0440130;Name=Msa0440130
chr3_3 mRNA 6685330 6691693 6685330 ID=Msa0440130-mRNA-1;Parent=Msa0440130;Name=Msa0440130-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.66|1|0.5|0.66|3|428|1180
chr3_3 exon 6685330 6685509 6685330 ID=Msa0440130-mRNA-1:exon:1446;Parent=Msa0440130-mRNA-1
chr3_3 exon 6687129 6687223 6687129 ID=Msa0440130-mRNA-1:exon:1447;Parent=Msa0440130-mRNA-1
chr3_3 exon 6687998 6691693 6687998 ID=Msa0440130-mRNA-1:exon:1448;Parent=Msa0440130-mRNA-1
chr3_3 CDS 6685330 6685509 6685330 ID=Msa0440130-mRNA-1:cds;Parent=Msa0440130-mRNA-1
chr3_3 CDS 6687129 6687223 6687129 ID=Msa0440130-mRNA-1:cds;Parent=Msa0440130-mRNA-1
chr3_3 CDS 6687998 6691265 6687998 ID=Msa0440130-mRNA-1:cds;Parent=Msa0440130-mRNA-1
chr3_3 three_prime_UTR 6691266 6691693 6691266 ID=Msa0440130-mRNA-1:three_prime_utr;Parent=Msa0440130-mRNA-1
Gene Sequence

>Msa0440130

CCGCGTCTCTCAAATTTGGTCCAATTAGATCTTATCGGGTTTTCGTTTCAAAGCCCAATCTCTCTCTTTCTCTCTCTTCCAAGATCTCGCTTCCGCCACTTCCGCAGCTCGGTTCCGAGCTTCCGCTCCCGGCACCGCCGTTCCGCGTTTCCAGATTCAGATTCAGTTGACTTATATCTGGCATATGGCAGTAGAAGAAGGTTAACTTCTGTGCTTTCCAAGGTTTTCCACAGCTTGATATTGCCCTTATTTCCAAGTTCTACAAAGCTAAAAAGGAGAGGATATACTGACAGGATGGCTACCCTTGAAGAAGGTGAAGTAGCTATGTCCCCTGATGTAAAAGATGAGACGATCAATGTCGACAAGATGGATGTCTTTGAAGAAGACAAATTAGCGGTGACCCATGATGTAAAACAAGAGCTAAATGGTACTGACTCTCAACCTAGCAATGATCTTGTAACCCAGGCTTCTGGTGGTGATGCAAATGTGTTGGACAACGCCAAAGAATGTCAGAAAAATGAGCCAGAGATTTCTGAATCACTACCCAAAAACCAAGTCGGCGATCAACTTGGTGATTCAAAAGCTACTCTTGACAAGTCTACCACTGAGGCACCACCCAGCATCCATGTGGTCGATTCTGAGGCATCGCCAAACAAAGGTGTGGTTTGTTCTGAAATGCAGACAAGTAATGATGTGGCTGTATCTGAAACACAGCACAGCAATGAGGATGCGGTACCTGAAGCACAGCACAACAATGAAGGGGTAGCTTTATCTGAAGCACAACACATAAATGAGGAGGTTGCATCGGAAAATCAGCACAACAATGAGAGGGTGCTTGCATCTGAAACACAGCCCACTGATGAGACTATTATCTGTGAAGCACAGCACAACAATGAGGAGGTTGTATCTGAACCACATTGTGATGATGAGGTGGTCATGTCTGAAGCACAGCCCATCAGTGAGGTGGTAATGTCTGACTCACAGCAGAACAATGTGGTCTTATCTGATTCGCAGCCGAGCAGTGAGGTAGTTTTTTCTGACACACAACCCAATAATGAGACTGTCATGTACGAGGCACAAATCAGTAATGAGACCGTATTGCATGAGGCGCAAATTAGCGATGAAGCTGTCATGCACGAGGCAGAAATCTGCAATGATGGGGTTGCATCTGAAGCTCGGCCTGAGAATGAGTTAGCCAATTCTACAATGGATCCCAACAATCAGCTATCCCATCAAGAAATTCTTGATAATCATCAGTTCGCAGACAGTCATAACACAGATGACAGACCAATACCCCACAATCACTTGCAAGAGTATGATACGCATCCGAACAGTCATCTGGACAATCATGAGGCACTGGACAACCATCAGTTGCCTAACTCTGAAACACTCTCGCCTGATCAGCTAGCCAATTCCCAAATGATGTCTCATTATGACCTGGCAAATAATGAAACACTTCACAACAATCAGCTGGTAAGTTCTCAAGCACACTATGAGATAGTCAATGCTAACAATTTTCCCAGCTATGAAATAGTAAATGCTGAAACTCAGCTAAACAATGAAGAGCATACCCCAGAGACACAGCCAAGTAAGAGGAGGAAAAAAAAGTCTATAGTCTGGGAACACTTTACCATAGAAACAGTTAGCGCTGGATGTAGAAGGGCATGTTGCAAGGAATGCAAACAAACTTTTGCCTACAGTACTGGTTCAAAAGTTGCTGGTACCAGCCACCTTAAACGGCACATTGCCAAGGGGGCCTGCCCAGCTCTTCTGCGTAGTTTGGATCCAAATCAGCATGCCCCATATACCCCACGTTCAAGGGGAAGTGGTGCTAGTAATGCTAGCAATACACCAAAACGACGATACAGAACCGCCAGCACACCTTACATAATTTTCGATCAAGATCGTTGTCGTCATGAGATTGCTAGGATGATCATTATGCATGATTACCCCCTTCACATGGTTGAGCATCCAGGATTTGTTGCATTTGTCCGAAATCTGCAACCCCAGTTCAACATGGTGACCTTTAATACTATTCAAGGAGACTGTGTCGCAACTTACTTGACGGAAAAGCAAAACCTTTCAAAATATTTTGATGAGTTACCAGGACGTTTTGGTCTGACACTGGATATGTGGACCTCAAGTCAATCTGTAGGCTATGTATTTATCACGGGACATTTTGTTGATAGTGACTGGAAGTTGCAGAAGAGAATTCTCAATGTTGTGATGGAACCATGCCCTGAGTCTGACTCTGCTCTCAGTCATGCTGTATCTGCCTGCATTTCTGATTGGAATTTGGAGGGTAGGCTGTTCACAATTACTTGTAATCAGCCACTTACTGAAGTTGCCCTTGAGAACCTTAGACCTCTACTCTCTGTGAAGAATCCACTTATCTTCAATGGTCAGTTGCTAATTGGACATTGCATTGCCCGTACTTTAAGCAATGTTGCATATGATTTGTTGAGCTCAGCACAAGGCATTGTCAATAAAATCCGGGAAAGTGTGAAATATGTGAAGACTTCAGAATCACACGAGGATAAATTCCTGGATCTTAAGGAACACCTTCAGGTTCCCAGTGAAAAGAGCCTTTTTATTGATGACCAAACCAAATGGAATACAACATATCAAATGTTGGTTGCAGCTTCTGAACTGAAGGAAGTGTTTTCCTGTTTAGACACTTCTGATCCTGATTACAAAGGAGCCCCATCTATTCCAGACTGGAAACTTGTTGAGATCCTTTGCACATACTTGAAGCCCCTTTATGATGCAGCAAACATTCTTATGACAACAACTTATCCCACTGCTATTACATTCTTTCATGAAGTTTGGAAATTACATTTGGATCTATCTCGAGCTGTTAAGAATGAAGATCCCTTCATTAGCGACCTTACTAAACCCATGTACGAAAAGATCGATAAGTACTGGAGAGATTGTAGTCTGGCTTTGGTGATTGCTGTAGTTATGGATCCTCGTTTCAAGATGAAGCTTGTTGAATTCAGTTTCACAAAAATCTACGGCGAGGATGCTCATGCGTTTGTCAAGATTGTTGATGACGGAATTCATGAGCTGTTTCATGAGTATGCAACCCTTCCTCTGCCACTAACACCGGCATATGCAGAAGAAGGAAATGCTGGAAGCAATATGAAGATGGAAGGATCCTCTGGAGGAACTTTGTTGTCAGATAATGGTCTTACAGACTTTGATGCCTACATCATGGAAACTTCTACCCATCAGACAAAGTCTGAATTGGATCAGTATCTGGAAGAATCTCTATTGCCACGAGTTCCAGACTTTGATGTATTAGGTTGGTGGAAGCTAAACAAACTTAAGTACCCCACACTTTCCAAGATGGCCCGAGATATATTGGCTATTCCAGTTTCTACCGTTCCTTCTGACTCTATCTTTGATAAAAAGAGCAAAGAGATGGATCAGTATCGAAGTTCCTTGCGTCCAGAGACAGTGGAGGCACTTGTGTGTGCCAAAGACTGGATGCAGTATGGTGCACCCGAATCTTCAACTGCGCTTGTGAAAATGGAATTCTAG
Protein sequence

>Msa0440130

PRLSNLVQLDLIGFSFQSPISLFLSLPRSRFRHFRSSVPSFRSRHRRSAFPDSDSVDLYLAYGSRRRLTSVLSKVFHSLILPLFPSSTKLKRRGYTDRMATLEEGEVAMSPDVKDETINVDKMDVFEEDKLAVTHDVKQELNGTDSQPSNDLVTQASGGDANVLDNAKECQKNEPEISESLPKNQVGDQLGDSKATLDKSTTEAPPSIHVVDSEASPNKGVVCSEMQTSNDVAVSETQHSNEDAVPEAQHNNEGVALSEAQHINEEVASENQHNNERVLASETQPTDETIICEAQHNNEEVVSEPHCDDEVVMSEAQPISEVVMSDSQQNNVVLSDSQPSSEVVFSDTQPNNETVMYEAQISNETVLHEAQISDEAVMHEAEICNDGVASEARPENELANSTMDPNNQLSHQEILDNHQFADSHNTDDRPIPHNHLQEYDTHPNSHLDNHEALDNHQLPNSETLSPDQLANSQMMSHYDLANNETLHNNQLVSSQAHYEIVNANNFPSYEIVNAETQLNNEEHTPETQPSKRRKKKSIVWEHFTIETVSAGCRRACCKECKQTFAYSTGSKVAGTSHLKRHIAKGACPALLRSLDPNQHAPYTPRSRGSGASNASNTPKRRYRTASTPYIIFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVRNLQPQFNMVTFNTIQGDCVATYLTEKQNLSKYFDELPGRFGLTLDMWTSSQSVGYVFITGHFVDSDWKLQKRILNVVMEPCPESDSALSHAVSACISDWNLEGRLFTITCNQPLTEVALENLRPLLSVKNPLIFNGQLLIGHCIARTLSNVAYDLLSSAQGIVNKIRESVKYVKTSESHEDKFLDLKEHLQVPSEKSLFIDDQTKWNTTYQMLVAASELKEVFSCLDTSDPDYKGAPSIPDWKLVEILCTYLKPLYDAANILMTTTYPTAITFFHEVWKLHLDLSRAVKNEDPFISDLTKPMYEKIDKYWRDCSLALVIAVVMDPRFKMKLVEFSFTKIYGEDAHAFVKIVDDGIHELFHEYATLPLPLTPAYAEEGNAGSNMKMEGSSGGTLLSDNGLTDFDAYIMETSTHQTKSELDQYLEESLLPRVPDFDVLGWWKLNKLKYPTLSKMARDILAIPVSTVPSDSIFDKKSKEMDQYRSSLRPETVEALVCAKDWMQYGAPESSTALVKMEF*