AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046660 MtrunA17_Chr7g0263231 96.863 1084 32 2 1 1082 1 1084 0.0 2187
Msa0046660 MtrunA17_Chr7g0263261 78.976 1113 115 9 1 1082 1 1025 0.0 1734
Msa0046660 MtrunA17_Chr4g0003151 49.774 663 308 9 421 1070 13 663 0.0 652
Msa0046660 MtrunA17_Chr2g0333261 47.832 692 324 14 411 1082 22 696 0.0 626
Msa0046660 MtrunA17_Chr2g0308821 38.026 547 315 9 534 1067 124 659 1.92e-124 395
Msa0046660 MtrunA17_Chr8g0359341 31.649 673 421 10 418 1067 51 707 4.66e-116 375
Msa0046660 MtrunA17_Chr8g0354631 28.843 683 435 11 416 1067 41 703 6.79e-91 308
Msa0046660 MtrunA17_Chr8g0383081 30.241 539 349 10 538 1066 29 550 1.22e-76 263
Msa0046660 MtrunA17_Chr4g0052681 29.490 529 364 6 544 1066 33 558 1.50e-76 264
Msa0046660 MtrunA17_Chr5g0402891 30.165 547 353 11 539 1067 44 579 9.94e-75 259
Msa0046660 MtrunA17_Chr8g0383041 29.222 527 364 6 544 1066 34 555 3.35e-73 254
Msa0046660 MtrunA17_Chr8g0383211 28.209 670 400 20 428 1071 26 640 4.44e-63 228
Msa0046660 MtrunA17_Chr8g0383071 33.213 277 182 3 603 877 33 308 1.19e-46 169
Msa0046660 MtrunA17_Chr4g0053391 32.937 252 161 1 815 1066 1 244 1.17e-45 166
Msa0046660 MtrunA17_Chr4g0062411 25.036 687 425 24 406 1069 33 652 4.06e-45 174
Msa0046660 MtrunA17_Chr4g0052601 27.617 449 291 7 403 844 1 422 6.04e-45 168
Msa0046660 MtrunA17_Chr8g0383051 31.317 281 186 5 544 820 46 323 2.25e-38 146
Msa0046660 MtrunA17_Chr5g0408131 37.500 216 116 6 862 1071 20 222 4.22e-34 131
Msa0046660 MtrunA17_Chr4g0052611 35.681 213 119 5 859 1067 6 204 2.91e-30 120
Msa0046660 MtrunA17_Chr1g0192041 28.571 175 125 0 768 942 62 236 2.16e-27 112
Msa0046660 MtrunA17_Chr8g0383061 31.455 213 119 6 865 1066 1 197 5.90e-21 93.2
Msa0046660 MtrunA17_Chr8g0390371 51.316 76 36 1 999 1074 10 84 5.20e-18 80.1
Msa0046660 MtrunA17_Chr3g0108001 42.466 73 42 0 994 1066 1 73 7.86e-17 77.4
Msa0046660 MtrunA17_Chr8g0383181 27.451 255 138 12 430 676 18 233 4.33e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046660 AT3G42170.1 60.656 671 221 6 412 1066 31 674 0.0 873
Msa0046660 AT3G42170.2 60.507 671 222 6 412 1066 9 652 0.0 870
Msa0046660 AT1G18560.1 20.916 655 454 18 431 1069 46 652 2.29e-32 135

Find 305 sgRNAs with CRISPR-Local

Find 455 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGGCAATGTGCCGTTTA+AGG 0.157033 1_1:+78932934 None:intergenic
CTCTTACTTGGCTGTGTCTC+TGG 0.171385 1_1:+78933092 None:intergenic
TTCAACTGCGCTTGTGAAAA+TGG 0.184972 1_1:-78931152 Msa0046660:CDS
CTGCATTTCTGATTGGAATT+TGG 0.193112 1_1:-78932388 Msa0046660:CDS
CCCCTTGAACGTGGGGTATA+TGG 0.202727 1_1:+78932864 None:intergenic
GTAACATAAGAGTGATTATT+TGG 0.208361 1_1:-78931037 Msa0046660:three_prime_UTR
CATCAAGGACTACTTGTATT+AGG 0.218179 1_1:+78930937 None:intergenic
TTCAATGGTCAGTTGCTAAT+TGG 0.222525 1_1:-78932270 Msa0046660:CDS
TGGTTTGGTCATCAATAAAA+AGG 0.227762 1_1:+78932079 None:intergenic
CTTTGTAGAACTTGGAAATA+AGG 0.239509 1_1:+78935204 None:intergenic
TTACATTCTTTCATGAAGTT+TGG 0.253618 1_1:-78931858 Msa0046660:CDS
CAAGTTCTACAAAGCTAAAA+AGG 0.265781 1_1:-78935195 Msa0046660:intron
GTATATGGGGCATGCTGATT+TGG 0.269732 1_1:+78932879 None:intergenic
TAGGCCGCGTCTCTCAAATT+TGG 0.280737 1_1:-78937044 Msa0046660:five_prime_UTR
CGTGGGGTGGAGTACTGTTT+AGG 0.281351 1_1:-78930736 Msa0046660:three_prime_UTR
GTTCCAGACTTTGATGTATT+AGG 0.284211 1_1:-78931382 Msa0046660:CDS
GTCTCCTTGAATAGTATTAA+AGG 0.286837 1_1:+78932641 None:intergenic
CCCAGCTCTTCTGCGTAGTT+TGG 0.289995 1_1:-78932904 Msa0046660:CDS
TCATTGTTGTGCTGTGCTTC+AGG 0.296894 1_1:+78933929 None:intergenic
CAAGATGGCCCGAGATATAT+TGG 0.306113 1_1:-78931320 Msa0046660:CDS
GTACATGACAGTCTCAATAT+TGG 0.315983 1_1:+78933616 None:intergenic
GGAACTTTGTTGTCAGATAA+TGG 0.316486 1_1:-78931499 Msa0046660:CDS
GGGGTATGCTCTTCATTGTT+TGG 0.319429 1_1:+78933113 None:intergenic
GGATCTTAAGGAACACCTTC+AGG 0.324716 1_1:-78932118 Msa0046660:CDS
CACAAGCGCAGTTGAAGATT+CGG 0.326854 1_1:+78931159 None:intergenic
TGAACTGGGGTTGCAGATTT+CGG 0.329740 1_1:+78932673 None:intergenic
TCCAGCGCTAACTGTTTCTA+TGG 0.333447 1_1:+78933034 None:intergenic
TGCAAGTGATTGTGGGGTAT+TGG 0.333800 1_1:+78933377 None:intergenic
ATGAGACATCATTTGGGAAT+TGG 0.336765 1_1:+78933256 None:intergenic
GTTGGGATCCATTGTAGAAT+TGG 0.339691 1_1:+78933469 None:intergenic
TGAAGTTTGGAAATTACATT+TGG 0.340740 1_1:-78931845 Msa0046660:CDS
TTGGTTCAATTAGATCTTAT+CGG 0.342821 1_1:-78937025 Msa0046660:five_prime_UTR
CCCTTGAACGTGGGGTATAT+GGG 0.346574 1_1:+78932865 None:intergenic
GGTCATAATGAGACATCATT+TGG 0.356363 1_1:+78933249 None:intergenic
AGATTCAGTTGACTTATATC+TGG 0.356459 1_1:-78936872 Msa0046660:intron
TCACAGAGAGTAGAGGTCTA+AGG 0.356710 1_1:+78932307 None:intergenic
CTGAGAGCAGAGTCAGAATC+AGG 0.358267 1_1:+78932426 None:intergenic
AGTTTCCAGTCTGGAATAGA+TGG 0.359200 1_1:+78931961 None:intergenic
AGCATTTACTATTTCATAGC+TGG 0.361317 1_1:+78933145 None:intergenic
GGATAAATTCCTGGATCTTA+AGG 0.362197 1_1:-78932130 Msa0046660:CDS
GATGAGTTACCAGGACGTTT+TGG 0.364188 1_1:-78932570 Msa0046660:CDS
GAATGTTTGCTGCATCATAA+AGG 0.367171 1_1:+78931908 None:intergenic
GAACAAACCACACCTTTGTT+TGG 0.368569 1_1:+78934016 None:intergenic
GTCTGAATTGGATCAGTATC+TGG 0.369969 1_1:-78931425 Msa0046660:CDS
CCATCAGACAAAGTCTGAAT+TGG 0.370844 1_1:-78931437 Msa0046660:CDS
TTTGTAGAACTTGGAAATAA+GGG 0.374574 1_1:+78935205 None:intergenic
TGGGAATTGGCTAGCTGATC+AGG 0.374885 1_1:+78933269 None:intergenic
TCACATATTTCACACTTTCC+CGG 0.376084 1_1:+78932172 None:intergenic
TAGGGAAAACTGTGTGTCTT+TGG 0.377405 1_1:-78930717 Msa0046660:three_prime_UTR
TAAAGGTCACCATGTTGAAC+TGG 0.379837 1_1:+78932658 None:intergenic
CAGTTAGCGCTGGATGTAGA+AGG 0.380601 1_1:-78933025 Msa0046660:CDS
TTGATATGTTGTATTCCATT+TGG 0.381932 1_1:+78932059 None:intergenic
AGTAGAACCTACCAACATAC+TGG 0.382265 1_1:+78931096 None:intergenic
GATCTTGTAACCCAGGTTAC+TGG 0.385294 1_1:-78934214 Msa0046660:CDS
ACCATACTGCATCCAGTCTT+TGG 0.385506 1_1:+78931186 None:intergenic
AATGTTTGCTGCATCATAAA+GGG 0.386549 1_1:+78931909 None:intergenic
TCTTACTTGGCTGTGTCTCT+GGG 0.386610 1_1:+78933093 None:intergenic
AGATGCTAGAACTAGTAAAT+AGG 0.388613 1_1:-78930971 Msa0046660:three_prime_UTR
CTGGTACCAGCCACCTTAAA+CGG 0.390950 1_1:-78932947 Msa0046660:CDS
TCTGCATATGCCGGTGTTAG+TGG 0.394211 1_1:+78931568 None:intergenic
GGCGAGAGTGTTTCAGAGTT+AGG 0.395382 1_1:+78933290 None:intergenic
TCAGAAGGAACGGTAGAAAC+TGG 0.395592 1_1:+78931292 None:intergenic
AAGTGGCGGAAGCGAGATCT+TGG 0.398063 1_1:+78936952 None:intergenic
TTGATGGGATAGCTGATTGT+TGG 0.403890 1_1:+78933451 None:intergenic
GCGGTTCTGTATCGTCGTTT+TGG 0.405020 1_1:+78932813 None:intergenic
ACAAGTGCCTCCACTGTCTC+TGG 0.406781 1_1:+78931214 None:intergenic
GATTATCAAGAATTTCTTGA+TGG 0.409862 1_1:+78933435 None:intergenic
ATCAAGGACTACTTGTATTA+GGG 0.412625 1_1:+78930938 None:intergenic
GTGGGGTGGAGTACTGTTTA+GGG 0.416262 1_1:-78930735 Msa0046660:three_prime_UTR
TGGCAATTGTTGCAGGCATA+TGG 0.416336 1_1:-78935283 Msa0046660:intron
TTTGGTGATTGCTGTAGTTA+TGG 0.417358 1_1:-78931722 Msa0046660:CDS
AAGTCAACTGAATCTGAATC+TGG 0.417485 1_1:+78936880 None:intergenic
CACCAAGTTGATCGCCAACT+TGG 0.420146 1_1:+78934113 None:intergenic
GAAACGCGGAACGGCGGTGC+CGG 0.420994 1_1:+78936902 None:intergenic
CGGACAAATGCAACAAATCC+TGG 0.422410 1_1:+78932693 None:intergenic
CAATATATCTCGGGCCATCT+TGG 0.422876 1_1:+78931321 None:intergenic
TCCAAACTACGCAGAAGAGC+TGG 0.425755 1_1:+78932903 None:intergenic
GATGGGGCTCCTTTGTAATC+AGG 0.426405 1_1:+78931979 None:intergenic
AGGATCAGAAGTGTCTAAAC+AGG 0.429136 1_1:+78931999 None:intergenic
TACATGACAGTCTCAATATT+GGG 0.429229 1_1:+78933617 None:intergenic
GATGTAAAACAAGAGCTAAA+TGG 0.431357 1_1:-78934259 Msa0046660:CDS
TGATGGGATAGCTGATTGTT+GGG 0.433059 1_1:+78933452 None:intergenic
TTGCATCACCACCAGTAACC+TGG 0.433142 1_1:+78934203 None:intergenic
CCCCATATACCCCACGTTCA+AGG 0.434780 1_1:-78932866 Msa0046660:CDS
TGGTTCAATTAGATCTTATC+GGG 0.436544 1_1:-78937024 Msa0046660:five_prime_UTR
TCAATCTGATTTGTTCCATC+AGG 0.439224 1_1:-78930908 Msa0046660:three_prime_UTR
CATTTCTGATTGGAATTTGG+AGG 0.440108 1_1:-78932385 Msa0046660:CDS
TTTCGTACATGGGTTTAGTA+AGG 0.440600 1_1:+78931779 None:intergenic
TATCTGCCTGCATTTCTGAT+TGG 0.442754 1_1:-78932395 Msa0046660:CDS
CATACTCTTGCAAGTGATTG+TGG 0.444583 1_1:+78933369 None:intergenic
AGAATCGACCACATGGATGC+TGG 0.446532 1_1:+78934048 None:intergenic
TAGCTACTTCACCTTCTTCA+AGG 0.447217 1_1:+78934362 None:intergenic
CACTTGTGTGTGCCAAAGAC+TGG 0.449617 1_1:-78931198 Msa0046660:CDS
GTGACCTTTAATACTATTCA+AGG 0.449805 1_1:-78932645 Msa0046660:CDS
ATCACACGAGGATAAATTCC+TGG 0.450304 1_1:-78932139 Msa0046660:CDS
GAGAGATTGTAGTCTGGCTT+TGG 0.451885 1_1:-78931740 Msa0046660:CDS
GAGGCAGAAATCTGCAATGA+TGG 0.452316 1_1:-78933527 Msa0046660:CDS
CAACCTAATACATCAAAGTC+TGG 0.454049 1_1:+78931379 None:intergenic
AAGGCATTGTCAATAAAATC+CGG 0.454969 1_1:-78932191 Msa0046660:CDS
CTTCACATGGTTGAGCATCC+AGG 0.454995 1_1:-78932711 Msa0046660:CDS
CCCATATACCCCACGTTCAA+GGG 0.456337 1_1:-78932865 Msa0046660:CDS
GAAGTGTTTCATTATTTGCC+AGG 0.457268 1_1:+78933228 None:intergenic
CGGAACGGCGGTGCCGGGAG+CGG 0.459306 1_1:+78936908 None:intergenic
ACTACGCAGAAGAGCTGGGC+AGG 0.459343 1_1:+78932908 None:intergenic
ATCTCAACAAGTTTCCAGTC+TGG 0.463011 1_1:+78931952 None:intergenic
ATGTTGTATTCCATTTGGTT+TGG 0.463820 1_1:+78932064 None:intergenic
ATGAAGATGGAAGGATCCTC+TGG 0.464092 1_1:-78931523 Msa0046660:CDS
GCATTTACTATTTCATAGCT+GGG 0.466040 1_1:+78933146 None:intergenic
TCGGAACCGAGCTGCGGAAG+TGG 0.467807 1_1:+78936935 None:intergenic
TACGCATCCGAACAGTCATC+TGG 0.468930 1_1:-78933345 Msa0046660:CDS
AAGAATCCACTTATCTTCAA+TGG 0.469596 1_1:-78932285 Msa0046660:CDS
GGTAGTGATTCAGAAATCTC+TGG 0.469638 1_1:+78934142 None:intergenic
ACAAGCGCAGTTGAAGATTC+GGG 0.470263 1_1:+78931160 None:intergenic
AGTACTGGTTCAAAAGTTGC+TGG 0.470825 1_1:-78932966 Msa0046660:CDS
CAGAGACACAGCCAAGTAAG+AGG 0.475117 1_1:-78933091 Msa0046660:CDS
CTGTGTCGCAACTTACTTGA+CGG 0.478704 1_1:-78932619 Msa0046660:CDS
CGGTTCCGAGCTTCCGCTCC+CGG 0.485671 1_1:-78936921 Msa0046660:five_prime_UTR
GTCATAATGAGACATCATTT+GGG 0.487942 1_1:+78933250 None:intergenic
CAGGAATCAGCGTAAATTTG+AGG 0.488124 1_1:-78930889 Msa0046660:three_prime_UTR
CTGATTGGAATTTGGAGGGT+AGG 0.488233 1_1:-78932380 Msa0046660:CDS
TTTAGTAAGGTCGCTAATGA+AGG 0.488795 1_1:+78931792 None:intergenic
CAGACTTTGATGTATTAGGT+TGG 0.489968 1_1:-78931378 Msa0046660:CDS
CTTCCGCCACTTCCGCAGCT+CGG 0.492346 1_1:-78936941 Msa0046660:five_prime_UTR
ATACTCTTGCAAGTGATTGT+GGG 0.493067 1_1:+78933370 None:intergenic
CTGGAATAGCCAATATATCT+CGG 0.495577 1_1:+78931311 None:intergenic
ATGAAAGAATGTAATAGCAG+TGG 0.500974 1_1:+78931867 None:intergenic
ACGAAAAGATCGATAAGTAC+TGG 0.501066 1_1:-78931762 Msa0046660:CDS
TTTCCTTCTTCTGCATATGC+CGG 0.502177 1_1:+78931559 None:intergenic
ATGCAACATTGCTTAAAGTA+CGG 0.503617 1_1:+78932235 None:intergenic
AACTGACCATTGAAGATAAG+TGG 0.504675 1_1:+78932279 None:intergenic
AAACGCGGAACGGCGGTGCC+GGG 0.506242 1_1:+78936903 None:intergenic
GAAGCACAGCACAACAATGA+AGG 0.508710 1_1:-78933926 Msa0046660:CDS
GAAGGTGTTCCTTAAGATCC+AGG 0.509466 1_1:+78932121 None:intergenic
CAAATTCCAATCAGAAATGC+AGG 0.510230 1_1:+78932389 None:intergenic
AACCAAGTTGGCGATCAACT+TGG 0.512168 1_1:-78934115 Msa0046660:CDS
AGACTTTGATGCCTACATCA+TGG 0.514193 1_1:-78931470 Msa0046660:CDS
TGCAACATTGCTTAAAGTAC+GGG 0.515335 1_1:+78932236 None:intergenic
TCGGGCCATCTTGGAAAGTG+TGG 0.515342 1_1:+78931330 None:intergenic
CAATTCAGACTTTGTCTGAT+GGG 0.517662 1_1:+78931438 None:intergenic
AGTGGCGGAAGCGAGATCTT+GGG 0.518101 1_1:+78936953 None:intergenic
ATTATCAAGAATTTCTTGAT+GGG 0.519975 1_1:+78933436 None:intergenic
AAATTTACGCTGATTCCTGA+TGG 0.521810 1_1:+78930893 None:intergenic
AATTTGCGCCTCATGCAATA+CGG 0.522050 1_1:+78933571 None:intergenic
GCCAAAGACTGGATGCAGTA+TGG 0.522224 1_1:-78931187 Msa0046660:CDS
TTTACTGGGACTGCTCTCGT+GGG 0.522741 1_1:-78930753 Msa0046660:three_prime_UTR
GTAGAGGTCTAAGGTTCTCA+AGG 0.523026 1_1:+78932316 None:intergenic
AAAGGTCACCATGTTGAACT+GGG 0.524503 1_1:+78932659 None:intergenic
CGGTGCCGGGAGCGGAAGCT+CGG 0.524953 1_1:+78936916 None:intergenic
ACCATAGAAACAGTTAGCGC+TGG 0.526279 1_1:-78933035 Msa0046660:CDS
TTATTGATGACCAAACCAAA+TGG 0.526661 1_1:-78932074 Msa0046660:CDS
TGCTGGAAGCAATATGAAGA+TGG 0.526869 1_1:-78931536 Msa0046660:CDS
CCAATTCAGACTTTGTCTGA+TGG 0.528198 1_1:+78931437 None:intergenic
ACTTTGATGTATTAGGTTGG+TGG 0.532207 1_1:-78931375 Msa0046660:CDS
AGGCAGAAATCTGCAATGAT+GGG 0.532322 1_1:-78933526 Msa0046660:CDS
CGGGCCATCTTGGAAAGTGT+GGG 0.532592 1_1:+78931331 None:intergenic
CATCCATGTGGTCGATTCTG+AGG 0.532671 1_1:-78934044 Msa0046660:CDS
GACGATCAATGTCGACAAGA+TGG 0.533978 1_1:-78934317 Msa0046660:CDS
TTGGTCTGACACTGGATATG+TGG 0.534582 1_1:-78932551 Msa0046660:CDS
CACCACTTCCCCTTGAACGT+GGG 0.536001 1_1:+78932856 None:intergenic
GTTAACTTCTGTGCTTTCCA+AGG 0.537766 1_1:-78935248 Msa0046660:five_prime_UTR
GAATTGGCTAACTCATTCTC+AGG 0.538505 1_1:+78933485 None:intergenic
GAATACAACATATCAAATGT+TGG 0.540376 1_1:-78932052 Msa0046660:CDS
AGACATTACCACCTCACTGA+TGG 0.540884 1_1:+78933712 None:intergenic
ACCCCACGTTCAAGGGGAAG+TGG 0.542848 1_1:-78932858 Msa0046660:CDS
CCGGTGTTAGTGGCAGAGGA+AGG 0.544115 1_1:+78931578 None:intergenic
GAGAATTCTCAATGTTGTGA+TGG 0.544510 1_1:-78932457 Msa0046660:CDS
TATGCAGAAGAAGGAAATGC+TGG 0.545470 1_1:-78931553 Msa0046660:CDS
CTTGTACCCAGTATGTTGGT+AGG 0.546002 1_1:-78931103 Msa0046660:three_prime_UTR
TGGAATAGCCAATATATCTC+GGG 0.548248 1_1:+78931312 None:intergenic
GTACTGGAGAGATTGTAGTC+TGG 0.548258 1_1:-78931746 Msa0046660:CDS
TGGATGCTCAACCATGTGAA+GGG 0.548561 1_1:+78932713 None:intergenic
TATGCCGGTGTTAGTGGCAG+AGG 0.549555 1_1:+78931574 None:intergenic
GAATCGACCACATGGATGCT+GGG 0.552885 1_1:+78934049 None:intergenic
CACAAATGAGGAGGTTGCAT+CGG 0.554818 1_1:-78933879 Msa0046660:CDS
GACATTACCACCTCACTGAT+GGG 0.555412 1_1:+78933713 None:intergenic
GTACCCCACACTTTCCAAGA+TGG 0.556211 1_1:-78931335 Msa0046660:CDS
CTCCACTGTCTCTGGACGCA+AGG 0.556363 1_1:+78931222 None:intergenic
TTTCAGAGTTAGGCAACTGA+TGG 0.556383 1_1:+78933300 None:intergenic
CCTTAAACGGCACATTGCCA+AGG 0.556626 1_1:-78932934 Msa0046660:CDS
GTTTCCAGTCTGGAATAGAT+GGG 0.557438 1_1:+78931962 None:intergenic
CTGGGACTGCTCTCGTGGGG+TGG 0.557542 1_1:-78930749 Msa0046660:three_prime_UTR
AACACTTCACAACAATCAGC+TGG 0.557702 1_1:-78933213 Msa0046660:CDS
CTTAAACGGCACATTGCCAA+GGG 0.557966 1_1:-78932933 Msa0046660:CDS
GTTGTCGTCATGAGATTGCT+AGG 0.559521 1_1:-78932758 Msa0046660:CDS
TCAAGGGCAACTTCAGTAAG+TGG 0.561947 1_1:+78932333 None:intergenic
GTAGGCTATGTATTTATCAC+GGG 0.561984 1_1:-78932513 Msa0046660:CDS
TGTAGGCTATGTATTTATCA+CGG 0.564616 1_1:-78932514 Msa0046660:CDS
TACACTTGTACCCAGTATGT+TGG 0.565021 1_1:-78931107 Msa0046660:three_prime_UTR
ACACCGGCATATGCAGAAGA+AGG 0.565672 1_1:-78931562 Msa0046660:CDS
TGAAAGAATGTAATAGCAGT+GGG 0.566230 1_1:+78931868 None:intergenic
TCAGATTGAGCTGCACATCA+AGG 0.567647 1_1:+78930922 None:intergenic
AAAGATAGAGTCAGAAGGAA+CGG 0.567707 1_1:+78931282 None:intergenic
TATCAAGCTGTGGAAAACCT+TGG 0.568184 1_1:+78935231 None:intergenic
AGCTACTTCACCTTCTTCAA+GGG 0.568719 1_1:+78934363 None:intergenic
TGCATCACCACCAGTAACCT+GGG 0.569807 1_1:+78934204 None:intergenic
AATGTGCCGTTTAAGGTGGC+TGG 0.572953 1_1:+78932941 None:intergenic
AGGCATATGGCAGTAGAAGA+AGG 0.575314 1_1:-78935270 Msa0046660:five_prime_UTR
GGTAGAAGTTTCCATGATGT+AGG 0.578747 1_1:+78931459 None:intergenic
TGATTGTCCAGATGACTGTT+CGG 0.578967 1_1:+78933338 None:intergenic
CTTTGAAGAAGACAAATTAG+CGG 0.579166 1_1:-78934290 Msa0046660:CDS
TCTGGACAATCATGAGGCAC+TGG 0.580433 1_1:-78933327 Msa0046660:CDS
CCAAACTACGCAGAAGAGCT+GGG 0.580595 1_1:+78932904 None:intergenic
GCAGGAGAGGATATACTGAC+AGG 0.580674 1_1:-78934393 Msa0046660:intron
CCTTGAACGTGGGGTATATG+GGG 0.581232 1_1:+78932866 None:intergenic
GGACTACTTGTATTAGGGAA+AGG 0.581639 1_1:+78930943 None:intergenic
GGTTGCAGCTTCTGAACTGA+AGG 0.581965 1_1:-78932031 Msa0046660:CDS
AAGCACAGCACAACAATGAA+GGG 0.583176 1_1:-78933925 Msa0046660:CDS
GAACCGAGCTGCGGAAGTGG+CGG 0.583231 1_1:+78936938 None:intergenic
CAGATAATAGTCTCATCAGT+GGG 0.583475 1_1:+78933812 None:intergenic
CTGGATGCTCAACCATGTGA+AGG 0.584734 1_1:+78932712 None:intergenic
AGGCATTGTCAATAAAATCC+GGG 0.586814 1_1:-78932190 Msa0046660:CDS
AGGATGGCTACCCTTGAAGA+AGG 0.589103 1_1:-78934373 Msa0046660:CDS
AAAATCAGCACAACAATGAG+AGG 0.594608 1_1:-78933856 Msa0046660:CDS
GAGCCCCATCTATTCCAGAC+TGG 0.596543 1_1:-78931966 Msa0046660:CDS
TACTTGTATTAGGGAAAGGT+AGG 0.597758 1_1:+78930947 None:intergenic
GCACCACTTCCCCTTGAACG+TGG 0.598034 1_1:+78932855 None:intergenic
TGGGTTACAAGATCATTGCT+AGG 0.599243 1_1:+78934223 None:intergenic
AGTGTCAGACCAAAACGTCC+TGG 0.599754 1_1:+78932561 None:intergenic
ATGTAGAAGGGCATGTTGCA+AGG 0.599805 1_1:-78933012 Msa0046660:CDS
ATTTCTGATTGGAATTTGGA+GGG 0.599904 1_1:-78932384 Msa0046660:CDS
ATGCCTCAGAATCGACCACA+TGG 0.600176 1_1:+78934041 None:intergenic
ACATCAAAGTCTGGAACTCG+TGG 0.601311 1_1:+78931388 None:intergenic
TACTCTTGCAAGTGATTGTG+GGG 0.601406 1_1:+78933371 None:intergenic
TTATCAAAGATAGAGTCAGA+AGG 0.601438 1_1:+78931277 None:intergenic
CGGTGTTAGTGGCAGAGGAA+GGG 0.608414 1_1:+78931579 None:intergenic
ATGGGGTTGCATCTGAAGCT+CGG 0.608998 1_1:-78933508 Msa0046660:CDS
GGAAGCAATATGAAGATGGA+AGG 0.610164 1_1:-78931532 Msa0046660:CDS
TTCCTTGCGTCCAGAGACAG+TGG 0.610328 1_1:-78931224 Msa0046660:CDS
TGAGAGCAGAGTCAGAATCA+GGG 0.611674 1_1:+78932427 None:intergenic
TAGAGGTCTAAGGTTCTCAA+GGG 0.612496 1_1:+78932317 None:intergenic
ATGTTTGCTGCATCATAAAG+GGG 0.614314 1_1:+78931910 None:intergenic
GCAGAGTCAGAATCAGGGCA+TGG 0.615340 1_1:+78932432 None:intergenic
ACAGCACAGCAATGAGGATG+CGG 0.617098 1_1:-78933954 Msa0046660:CDS
CCATATACCCCACGTTCAAG+GGG 0.617486 1_1:-78932864 Msa0046660:CDS
ACCACTTCCCCTTGAACGTG+GGG 0.618044 1_1:+78932857 None:intergenic
CCTTCCTCTGCCACTAACAC+CGG 0.618365 1_1:-78931578 Msa0046660:CDS
TGAAGCACAACACACAAATG+AGG 0.619518 1_1:-78933891 Msa0046660:CDS
TTAGTAAGGTCGCTAATGAA+GGG 0.622144 1_1:+78931793 None:intergenic
TTTGTCAAGATTGTTGATGA+CGG 0.623110 1_1:-78931631 Msa0046660:CDS
TGGACCTCAAGTCAATCTGT+AGG 0.623873 1_1:-78932531 Msa0046660:CDS
GGAAGCTCGGAACCGAGCTG+CGG 0.624865 1_1:+78936929 None:intergenic
TAGCAATGATCTTGTAACCC+AGG 0.625077 1_1:-78934221 Msa0046660:CDS
TGAACCAAATTTGAGAGACG+CGG 0.625828 1_1:+78937040 None:intergenic
GGCATTGCCAAACAAAGGTG+TGG 0.625973 1_1:-78934023 Msa0046660:CDS
AGTTAGCGCTGGATGTAGAA+GGG 0.626392 1_1:-78933024 Msa0046660:CDS
GAGAGGATATACTGACAGGA+TGG 0.629895 1_1:-78934389 Msa0046660:exon
GGATGCTCAACCATGTGAAG+GGG 0.631155 1_1:+78932714 None:intergenic
TGGCAATGTGCCGTTTAAGG+TGG 0.632744 1_1:+78932937 None:intergenic
CGATGAAGCCGTCATGCACG+AGG 0.633504 1_1:-78933546 Msa0046660:CDS
GGATTCTTCACAGAGAGTAG+AGG 0.636348 1_1:+78932300 None:intergenic
GTAGAACCTACCAACATACT+GGG 0.638697 1_1:+78931097 None:intergenic
TAATGAGACCGTATTGCATG+AGG 0.638850 1_1:-78933579 Msa0046660:CDS
GATTTCTGCCTCGTGCATGA+CGG 0.639324 1_1:+78933538 None:intergenic
AGACACAGCCAAGTAAGAGG+AGG 0.639336 1_1:-78933088 Msa0046660:CDS
GATGCTGGGTGGTGCCTCAG+TGG 0.640560 1_1:+78934063 None:intergenic
TGGTGGTGATGCAAATGTGT+TGG 0.641229 1_1:-78934194 Msa0046660:CDS
CTTACTTGGCTGTGTCTCTG+GGG 0.642263 1_1:+78933094 None:intergenic
TGAGTTAGCCAATTCTACAA+TGG 0.644535 1_1:-78933477 Msa0046660:CDS
TTAAACGGCACATTGCCAAG+GGG 0.646090 1_1:-78932932 Msa0046660:CDS
ATAAGGGCAATATCAAGCTG+TGG 0.646903 1_1:+78935221 None:intergenic
TTACTGGGACTGCTCTCGTG+GGG 0.650251 1_1:-78930752 Msa0046660:three_prime_UTR
GGGGCTTCAAGTATGTGCAA+AGG 0.651165 1_1:+78931929 None:intergenic
GGCAGAAATCTGCAATGATG+GGG 0.652193 1_1:-78933525 Msa0046660:CDS
AAATCAGCACAACAATGAGA+GGG 0.653205 1_1:-78933855 Msa0046660:CDS
CTGAATCTGGAAACGCGGAA+CGG 0.654262 1_1:+78936893 None:intergenic
GATGCTCAACCATGTGAAGG+GGG 0.658296 1_1:+78932715 None:intergenic
TCTGAGGCATTGCCAAACAA+AGG 0.658767 1_1:-78934028 Msa0046660:CDS
AGCACAGCCCATCAGTGAGG+TGG 0.661112 1_1:-78933720 Msa0046660:CDS
AATGATGTCTCATTATGACC+TGG 0.663857 1_1:-78933246 Msa0046660:CDS
ACAAGCTTCATCTTGAAACG+AGG 0.665126 1_1:+78931697 None:intergenic
GAATCAGCGTAAATTTGAGG+TGG 0.665261 1_1:-78930886 Msa0046660:three_prime_UTR
TCTGCAACCCCAGTTCAACA+TGG 0.665327 1_1:-78932667 Msa0046660:CDS
ACTTCTGATCCTGATTACAA+AGG 0.667473 1_1:-78931988 Msa0046660:CDS
TGAACCACATTGTGATGATG+AGG 0.667703 1_1:-78933756 Msa0046660:CDS
GGGCCATCTTGGAAAGTGTG+GGG 0.669815 1_1:+78931332 None:intergenic
ACAGATAATAGTCTCATCAG+TGG 0.670892 1_1:+78933811 None:intergenic
TAAACGGCACATTGCCAAGG+GGG 0.671843 1_1:-78932931 Msa0046660:CDS
GATTTGTTGAGCTCAGCACA+AGG 0.675538 1_1:-78932210 Msa0046660:CDS
TGAATCTGAATCTGGAAACG+CGG 0.676868 1_1:+78936888 None:intergenic
AATTATGTAAGGTGTGCTGG+CGG 0.677199 1_1:+78932794 None:intergenic
AGCACAGCACAACAATGAAG+GGG 0.678121 1_1:-78933924 Msa0046660:CDS
AATCTGGAAACGCGGAACGG+CGG 0.678556 1_1:+78936896 None:intergenic
TTTCCAGTCTGGAATAGATG+GGG 0.680285 1_1:+78931963 None:intergenic
AGCACAACACACAAATGAGG+AGG 0.684759 1_1:-78933888 Msa0046660:CDS
GGCACCACCCAGCATCCATG+TGG 0.684942 1_1:-78934056 Msa0046660:CDS
CAGTCATCTGGACAATCATG+AGG 0.685159 1_1:-78933333 Msa0046660:CDS
TGACAACAAAGTTCCTCCAG+AGG 0.688757 1_1:+78931507 None:intergenic
AAGGTCACCATGTTGAACTG+GGG 0.690139 1_1:+78932660 None:intergenic
TGAAGCACAGCACAACAATG+AGG 0.693045 1_1:-78933789 Msa0046660:CDS
ATAGCCTACAGATTGACTTG+AGG 0.693367 1_1:+78932527 None:intergenic
TGAAACACAGCACAGCAATG+AGG 0.694362 1_1:-78933960 Msa0046660:CDS
ACCACATTGTGATGATGAGG+TGG 0.696189 1_1:-78933753 Msa0046660:CDS
AGCACAGCACAACAATGAGG+AGG 0.697162 1_1:-78933786 Msa0046660:CDS
AAGATGGAAGGATCCTCTGG+AGG 0.706666 1_1:-78931520 Msa0046660:CDS
CTTGTAACCCAGGTTACTGG+TGG 0.715402 1_1:-78934211 Msa0046660:CDS
TATTGAGACTGTCATGTACG+AGG 0.715965 1_1:-78933612 Msa0046660:CDS
TGACTCACAGCAGAACAATG+TGG 0.718584 1_1:-78933690 Msa0046660:CDS
TGAAGCACAGCCCATCAGTG+AGG 0.722715 1_1:-78933723 Msa0046660:CDS
AATGCAGACAAGTAATGATG+TGG 0.730823 1_1:-78933990 Msa0046660:CDS
TGATTCGCAGCCGAGCAGTG+AGG 0.731515 1_1:-78933660 Msa0046660:CDS
CTTGCGTCCAGAGACAGTGG+AGG 0.735351 1_1:-78931221 Msa0046660:CDS
ACCACCTCATCATCACAATG+TGG 0.740305 1_1:+78933752 None:intergenic
TCGACCACATGGATGCTGGG+TGG 0.771726 1_1:+78934052 None:intergenic
TCTTGACAAGTCTACCACTG+AGG 0.786307 1_1:-78934077 Msa0046660:CDS
GAAGACTTCAGAATCACACG+AGG 0.794926 1_1:-78932151 Msa0046660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTAATAA+TGG + chr1_1:78933332-78933351 None:intergenic 0.0%
!!! TAATTTTTTTTTTTTTTTTT+TGG - chr1_1:78933336-78933355 Msa0046660:CDS 0.0%
!!! AATTTTTTTTTTTTTTTTTT+GGG - chr1_1:78933337-78933356 Msa0046660:CDS 0.0%
!! AATATATTATGTATATATGT+TGG + chr1_1:78931648-78931667 None:intergenic 10.0%
!!! TTATTCTTTTCATTATTTTA+TGG - chr1_1:78931783-78931802 Msa0046660:CDS 10.0%
!!! TATTCTTTTCATTATTTTAT+GGG - chr1_1:78931784-78931803 Msa0046660:CDS 10.0%
!!! GTTAAATATAACTTATTTTA+TGG - chr1_1:78932454-78932473 Msa0046660:CDS 10.0%
!! AGAATATTATTATCAGAAAA+TGG + chr1_1:78931328-78931347 None:intergenic 15.0%
!! AACAATAATTATCTATTGTT+TGG + chr1_1:78931704-78931723 None:intergenic 15.0%
!! AATAATGAAAAGAATAAACA+AGG + chr1_1:78931780-78931799 None:intergenic 15.0%
!!! ATTCTTTTCATTATTTTATG+GGG - chr1_1:78931785-78931804 Msa0046660:CDS 15.0%
!! ACATGAATATATTAGTAATT+TGG - chr1_1:78931978-78931997 Msa0046660:CDS 15.0%
!! ATATATTAGTAATTTGGTAT+AGG - chr1_1:78931984-78932003 Msa0046660:CDS 15.0%
!!! ATACTATAAATAACGAATTT+TGG - chr1_1:78932999-78933018 Msa0046660:CDS 15.0%
!!! TACTATAAATAACGAATTTT+GGG - chr1_1:78933000-78933019 Msa0046660:CDS 15.0%
!! TTATAATCTGTTACATTACA+TGG - chr1_1:78931133-78931152 Msa0046660:exon 20.0%
!!! CTTATTTGCTTTTTTGATTT+TGG - chr1_1:78931356-78931375 Msa0046660:CDS 20.0%
!!! GATTGGATTTATTTTCTTAA+TGG - chr1_1:78931411-78931430 Msa0046660:CDS 20.0%
!! ATGGATGAAAATATTGAATT+TGG - chr1_1:78931430-78931449 Msa0046660:CDS 20.0%
!!! TGCAATATTATCTTTTGATT+TGG - chr1_1:78931475-78931494 Msa0046660:CDS 20.0%
!!! AAACTATCCACTAATATTTT+TGG + chr1_1:78931576-78931595 None:intergenic 20.0%
!! AGTATTGTTAGTCAAATTTA+GGG + chr1_1:78931854-78931873 None:intergenic 20.0%
!! TAGTATTGTTAGTCAAATTT+AGG + chr1_1:78931855-78931874 None:intergenic 20.0%
!! TCAAAATAAAACATGAACAA+TGG + chr1_1:78931880-78931899 None:intergenic 20.0%
!! TACAAATCAATTATAACAGA+GGG - chr1_1:78931934-78931953 Msa0046660:CDS 20.0%
!! ATATATTCATGTTCATATTG+AGG + chr1_1:78931970-78931989 None:intergenic 20.0%
!! AACATGTACTTTAGATTATA+TGG + chr1_1:78932278-78932297 None:intergenic 20.0%
!!! TTATTTTATATTGCATGTGT+GGG - chr1_1:78932686-78932705 Msa0046660:CDS 20.0%
!! TTAGTGTTTATAGAATTGTT+TGG - chr1_1:78932872-78932891 Msa0046660:CDS 20.0%
!! ATTGTCAAAGAAAAATAACA+AGG + chr1_1:78933056-78933075 None:intergenic 20.0%
!! TCATTATTTATTTCCAAATG+TGG - chr1_1:78933208-78933227 Msa0046660:CDS 20.0%
!! AATTAAACATATACCACATT+TGG + chr1_1:78933224-78933243 None:intergenic 20.0%
!! CACATGAAAAAAAAAAATAC+AGG + chr1_1:78933265-78933284 None:intergenic 20.0%
!!! GTATTTTTTTTTTTCATGTG+AGG - chr1_1:78933265-78933284 Msa0046660:CDS 20.0%
!! ATTATCAAGAATTTCTTGAT+GGG + chr1_1:78934324-78934343 None:intergenic 20.0%
!! TCTTGATCAAAAATTATGTA+AGG + chr1_1:78934977-78934996 None:intergenic 20.0%
!!! ACTCATCAAAATATTTTGAA+AGG + chr1_1:78935174-78935193 None:intergenic 20.0%
!!! TTTTTATTTGGTGATTTTAC+TGG - chr1_1:78936989-78937008 Msa0046660:five_prime_UTR 20.0%
!!! TTTTATTTGGTGATTTTACT+GGG - chr1_1:78936990-78937009 Msa0046660:five_prime_UTR 20.0%
! TTGGTTCAATTAGATCTTAT+CGG - chr1_1:78930732-78930751 Msa0046660:three_prime_UTR 25.0%
!! ACTTGATCTATTTTACTGTT+AGG - chr1_1:78931164-78931183 Msa0046660:CDS 25.0%
!! TTTTTCGTTCTTATTCAACT+GGG - chr1_1:78931187-78931206 Msa0046660:CDS 25.0%
! ACTATATTCTAATCCATTTC+CGG + chr1_1:78931278-78931297 None:intergenic 25.0%
! GATTAGAATATAGTGTGTTT+AGG - chr1_1:78931284-78931303 Msa0046660:CDS 25.0%
! TAAATCCAATCAAAACAAGA+TGG + chr1_1:78931402-78931421 None:intergenic 25.0%
! ATATGTGCATTATCAACTAT+TGG + chr1_1:78931508-78931527 None:intergenic 25.0%
! GTTTGATCCAAAAATATTAG+TGG - chr1_1:78931566-78931585 Msa0046660:CDS 25.0%
!!! ATAGTGTGAGCTTTTAATTT+AGG + chr1_1:78931676-78931695 None:intergenic 25.0%
! AATATTGTGAGAGACAAAAT+TGG + chr1_1:78931911-78931930 None:intergenic 25.0%
! GTACAAATCAATTATAACAG+AGG - chr1_1:78931933-78931952 Msa0046660:CDS 25.0%
!!! AAAAAAGTTGATGTACAACT+TGG + chr1_1:78932040-78932059 None:intergenic 25.0%
! ATAGCATAGTTATTACTTCA+TGG + chr1_1:78932151-78932170 None:intergenic 25.0%
! AAATTTGTGCAATTGAAATG+TGG + chr1_1:78932175-78932194 None:intergenic 25.0%
!!! TTTATAATGGTTGATGAAGA+TGG - chr1_1:78932231-78932250 Msa0046660:CDS 25.0%
!!! AAGTCAAATTTGCTTAGTTT+TGG - chr1_1:78932432-78932451 Msa0046660:CDS 25.0%
! TTTGTAGAACTTGGAAATAA+GGG + chr1_1:78932555-78932574 None:intergenic 25.0%
! CAATATAAAATAACCCTTGA+GGG + chr1_1:78932679-78932698 None:intergenic 25.0%
!!! GTTATTTTATATTGCATGTG+TGG - chr1_1:78932685-78932704 Msa0046660:CDS 25.0%
! TGCACTATAGTAAATCTTAA+GGG - chr1_1:78932939-78932958 Msa0046660:CDS 25.0%
! ATTCGTTATTTATAGTATCC+AGG + chr1_1:78932997-78933016 None:intergenic 25.0%
! GAATTTATTTGTTTGTGCTT+TGG - chr1_1:78933168-78933187 Msa0046660:CDS 25.0%
! TTTACAGTTACAATTAAGTG+AGG + chr1_1:78933306-78933325 None:intergenic 25.0%
!!! TTTTTTTTTTTGGGTAAAGC+AGG - chr1_1:78933346-78933365 Msa0046660:CDS 25.0%
! GATTATCAAGAATTTCTTGA+TGG + chr1_1:78934325-78934344 None:intergenic 25.0%
! GAAAAAAAAGTCTATAGTCT+GGG - chr1_1:78934691-78934710 Msa0046660:intron 25.0%
!!! AAATATTTTGATGAGTTACC+AGG - chr1_1:78935178-78935197 Msa0046660:intron 25.0%
! TTGATATGTTGTATTCCATT+TGG + chr1_1:78935701-78935720 None:intergenic 25.0%
! GAATACAACATATCAAATGT+TGG - chr1_1:78935705-78935724 Msa0046660:intron 25.0%
! TTACATTCTTTCATGAAGTT+TGG - chr1_1:78935899-78935918 Msa0046660:intron 25.0%
! TGAAGTTTGGAAATTACATT+TGG - chr1_1:78935912-78935931 Msa0046660:intron 25.0%
! TTCAGTTTCACAAAAATCTA+CGG - chr1_1:78936087-78936106 Msa0046660:intron 25.0%
! GTAACATAAGAGTGATTATT+TGG - chr1_1:78936720-78936739 Msa0046660:intron 25.0%
!!! TTGCCATTGGTTTTTTTATT+TGG - chr1_1:78936977-78936996 Msa0046660:five_prime_UTR 25.0%
! TCACCAAATAAAAAAACCAA+TGG + chr1_1:78936983-78937002 None:intergenic 25.0%
TGGTTCAATTAGATCTTATC+GGG - chr1_1:78930733-78930752 Msa0046660:three_prime_UTR 30.0%
! AGATTCAGTTGACTTATATC+TGG - chr1_1:78930885-78930904 Msa0046660:three_prime_UTR 30.0%
! TTTAACTTTCACGTTTGTGT+TGG - chr1_1:78931003-78931022 Msa0046660:three_prime_UTR 30.0%
! GTTTTTCGTTCTTATTCAAC+TGG - chr1_1:78931186-78931205 Msa0046660:CDS 30.0%
TGTTTACGATATAGTTGTAC+CGG - chr1_1:78931256-78931275 Msa0046660:CDS 30.0%
!!! TGATACCATCTTGTTTTGAT+TGG - chr1_1:78931394-78931413 Msa0046660:CDS 30.0%
! TAGTCAAATTTAGGGTTCAA+CGG + chr1_1:78931846-78931865 None:intergenic 30.0%
ATTAGTAATTTGGTATAGGC+TGG - chr1_1:78931988-78932007 Msa0046660:CDS 30.0%
TTAGTAATTTGGTATAGGCT+GGG - chr1_1:78931989-78932008 Msa0046660:CDS 30.0%
GATATAGTCAGTGAGTAAAT+GGG - chr1_1:78932011-78932030 Msa0046660:CDS 30.0%
CAATAGATAATTAACCTGTC+CGG - chr1_1:78932125-78932144 Msa0046660:CDS 30.0%
! TCTGTTCAGCTGATTTATAA+TGG - chr1_1:78932218-78932237 Msa0046660:CDS 30.0%
ACTATCAGCAAATACAAACA+CGG + chr1_1:78932330-78932349 None:intergenic 30.0%
! TGTATTTGCTGATAGTTTGT+TGG - chr1_1:78932334-78932353 Msa0046660:CDS 30.0%
CTAACAATGATAGTAAGACA+CGG + chr1_1:78932391-78932410 None:intergenic 30.0%
! TATTTTATGGCAATTGTTGC+AGG - chr1_1:78932467-78932486 Msa0046660:CDS 30.0%
CTTTGTAGAACTTGGAAATA+AGG + chr1_1:78932556-78932575 None:intergenic 30.0%
!!! CTTTTTAGCTTTGTAGAACT+TGG + chr1_1:78932564-78932583 None:intergenic 30.0%
CAAGTTCTACAAAGCTAAAA+AGG - chr1_1:78932562-78932581 Msa0046660:CDS 30.0%
TCTACAAAGCTAAAAAGGTA+AGG - chr1_1:78932567-78932586 Msa0046660:CDS 30.0%
CTACAAAGCTAAAAAGGTAA+GGG - chr1_1:78932568-78932587 Msa0046660:CDS 30.0%
GCAATATAAAATAACCCTTG+AGG + chr1_1:78932680-78932699 None:intergenic 30.0%
TGTGATCATGTGCATATTTA+AGG - chr1_1:78932760-78932779 Msa0046660:CDS 30.0%
!! AAAGTTGATGCATTGCATTT+GGG - chr1_1:78932783-78932802 Msa0046660:CDS 30.0%
AAGATTTACTATAGTGCAGT+AGG + chr1_1:78932937-78932956 None:intergenic 30.0%
CTGCACTATAGTAAATCTTA+AGG - chr1_1:78932938-78932957 Msa0046660:CDS 30.0%
AGTAAACCAAAATATACACC+TGG - chr1_1:78932976-78932995 Msa0046660:CDS 30.0%
! TAGTATCCAGGTGTATATTT+TGG + chr1_1:78932985-78933004 None:intergenic 30.0%
ATGAATAAACCATGCACATA+TGG + chr1_1:78933098-78933117 None:intergenic 30.0%
! CTTTGAAGAAGACAAATTAG+CGG - chr1_1:78933467-78933486 Msa0046660:CDS 30.0%
!!! TAGCTCTTGTTTTACATCAT+GGG + chr1_1:78933496-78933515 None:intergenic 30.0%
!!! TTAGCTCTTGTTTTACATCA+TGG + chr1_1:78933497-78933516 None:intergenic 30.0%
GATGTAAAACAAGAGCTAAA+TGG - chr1_1:78933498-78933517 Msa0046660:CDS 30.0%
!! CTCATTTTTCTGACATTCTT+TGG + chr1_1:78933595-78933614 None:intergenic 30.0%
TACATGACAGTCTCAATATT+GGG + chr1_1:78934143-78934162 None:intergenic 30.0%
GTCATAATGAGACATCATTT+GGG + chr1_1:78934510-78934529 None:intergenic 30.0%
GCATTTACTATTTCATAGCT+GGG + chr1_1:78934614-78934633 None:intergenic 30.0%
AGCATTTACTATTTCATAGC+TGG + chr1_1:78934615-78934634 None:intergenic 30.0%
!!! TTTTTTTTCCTCCTCTTACT+TGG + chr1_1:78934680-78934699 None:intergenic 30.0%
GGAAAAAAAAGTCTATAGTC+TGG - chr1_1:78934690-78934709 Msa0046660:intron 30.0%
AAAAATTATGTAAGGTGTGC+TGG + chr1_1:78934969-78934988 None:intergenic 30.0%
GTGACCTTTAATACTATTCA+AGG - chr1_1:78935112-78935131 Msa0046660:intron 30.0%
GTCTCCTTGAATAGTATTAA+AGG + chr1_1:78935119-78935138 None:intergenic 30.0%
TGTAGGCTATGTATTTATCA+CGG - chr1_1:78935243-78935262 Msa0046660:five_prime_UTR 30.0%
ATTTCTGATTGGAATTTGGA+GGG - chr1_1:78935373-78935392 Msa0046660:intron 30.0%
AAGAATCCACTTATCTTCAA+TGG - chr1_1:78935472-78935491 Msa0046660:intron 30.0%
ATGCAACATTGCTTAAAGTA+CGG + chr1_1:78935525-78935544 None:intergenic 30.0%
!! AAGGCATTGTCAATAAAATC+CGG - chr1_1:78935566-78935585 Msa0046660:intron 30.0%
! ATAAAAAGGCTCTTTTCACT+GGG + chr1_1:78935667-78935686 None:intergenic 30.0%
! AATAAAAAGGCTCTTTTCAC+TGG + chr1_1:78935668-78935687 None:intergenic 30.0%
!! TGGTTTGGTCATCAATAAAA+AGG + chr1_1:78935681-78935700 None:intergenic 30.0%
! TTATTGATGACCAAACCAAA+TGG - chr1_1:78935683-78935702 Msa0046660:intron 30.0%
ATGTTGTATTCCATTTGGTT+TGG + chr1_1:78935696-78935715 None:intergenic 30.0%
! AATGTTTGCTGCATCATAAA+GGG + chr1_1:78935851-78935870 None:intergenic 30.0%
TGAAAGAATGTAATAGCAGT+GGG + chr1_1:78935892-78935911 None:intergenic 30.0%
ATGAAAGAATGTAATAGCAG+TGG + chr1_1:78935893-78935912 None:intergenic 30.0%
! TTATCGATCTTTTCGTACAT+GGG + chr1_1:78935991-78936010 None:intergenic 30.0%
! TTTGTCAAGATTGTTGATGA+CGG - chr1_1:78936126-78936145 Msa0046660:intron 30.0%
TTATCAAAGATAGAGTCAGA+AGG + chr1_1:78936483-78936502 None:intergenic 30.0%
TGATAAAAAGAGCAAAGAGA+TGG - chr1_1:78936497-78936516 Msa0046660:intron 30.0%
AGATGCTAGAACTAGTAAAT+AGG - chr1_1:78936786-78936805 Msa0046660:intron 30.0%
ATCAAGGACTACTTGTATTA+GGG + chr1_1:78936822-78936841 None:intergenic 30.0%
AAGTCAACTGAATCTGAATC+TGG + chr1_1:78930880-78930899 None:intergenic 35.0%
TGTTACATTACATGGAGTCA+TGG - chr1_1:78931141-78931160 Msa0046660:exon 35.0%
! AGTGGATAGTTTCTCTTTTC+TGG - chr1_1:78931584-78931603 Msa0046660:CDS 35.0%
TATAATGAGCTTGATCACCA+AGG - chr1_1:78931607-78931626 Msa0046660:CDS 35.0%
CTGTATGCATAGATTCAGAA+TGG - chr1_1:78931727-78931746 Msa0046660:CDS 35.0%
GGATATAGTCAGTGAGTAAA+TGG - chr1_1:78932010-78932029 Msa0046660:CDS 35.0%
ATGTAGAACAAGTGCAAACA+AGG + chr1_1:78932104-78932123 None:intergenic 35.0%
CATAGTTATTACTTCATGGC+CGG + chr1_1:78932147-78932166 None:intergenic 35.0%
! GCAAATACAAACACGGATTA+TGG + chr1_1:78932323-78932342 None:intergenic 35.0%
! TGATAGTAAGACACGGATTA+TGG + chr1_1:78932384-78932403 None:intergenic 35.0%
!! ATTCTGCTATGGTTGTTTTC+TGG - chr1_1:78932607-78932626 Msa0046660:CDS 35.0%
!! TTCTGCTATGGTTGTTTTCT+GGG - chr1_1:78932608-78932627 Msa0046660:CDS 35.0%
!! GAAAGTTGATGCATTGCATT+TGG - chr1_1:78932782-78932801 Msa0046660:CDS 35.0%
! TCGTCTCATCTTTTACATCA+GGG + chr1_1:78933425-78933444 None:intergenic 35.0%
! ATCGTCTCATCTTTTACATC+AGG + chr1_1:78933426-78933445 None:intergenic 35.0%
AATGCAGACAAGTAATGATG+TGG - chr1_1:78933767-78933786 Msa0046660:CDS 35.0%
AAAATCAGCACAACAATGAG+AGG - chr1_1:78933901-78933920 Msa0046660:CDS 35.0%
AAATCAGCACAACAATGAGA+GGG - chr1_1:78933902-78933921 Msa0046660:CDS 35.0%
CAGATAATAGTCTCATCAGT+GGG + chr1_1:78933948-78933967 None:intergenic 35.0%
ACAGATAATAGTCTCATCAG+TGG + chr1_1:78933949-78933968 None:intergenic 35.0%
GTACATGACAGTCTCAATAT+TGG + chr1_1:78934144-78934163 None:intergenic 35.0%
TGAGTTAGCCAATTCTACAA+TGG - chr1_1:78934280-78934299 Msa0046660:CDS 35.0%
ATACTCTTGCAAGTGATTGT+GGG + chr1_1:78934390-78934409 None:intergenic 35.0%
ATGAGACATCATTTGGGAAT+TGG + chr1_1:78934504-78934523 None:intergenic 35.0%
GGTCATAATGAGACATCATT+TGG + chr1_1:78934511-78934530 None:intergenic 35.0%
AATGATGTCTCATTATGACC+TGG - chr1_1:78934511-78934530 Msa0046660:intron 35.0%
! GAAGTGTTTCATTATTTGCC+AGG + chr1_1:78934532-78934551 None:intergenic 35.0%
! AACTTTTGAACCAGTACTGT+AGG + chr1_1:78934789-78934808 None:intergenic 35.0%
GTAGGCTATGTATTTATCAC+GGG - chr1_1:78935244-78935263 Msa0046660:five_prime_UTR 35.0%
!!! GACATTTTGTTGATAGTGAC+TGG - chr1_1:78935266-78935285 Msa0046660:five_prime_UTR 35.0%
GAGAATTCTCAATGTTGTGA+TGG - chr1_1:78935300-78935319 Msa0046660:intron 35.0%
CAAATTCCAATCAGAAATGC+AGG + chr1_1:78935371-78935390 None:intergenic 35.0%
CTGCATTTCTGATTGGAATT+TGG - chr1_1:78935369-78935388 Msa0046660:intron 35.0%
CATTTCTGATTGGAATTTGG+AGG - chr1_1:78935372-78935391 Msa0046660:intron 35.0%
AACTGACCATTGAAGATAAG+TGG + chr1_1:78935481-78935500 None:intergenic 35.0%
TTCAATGGTCAGTTGCTAAT+TGG - chr1_1:78935487-78935506 Msa0046660:intron 35.0%
TGCAACATTGCTTAAAGTAC+GGG + chr1_1:78935524-78935543 None:intergenic 35.0%
! AGGCATTGTCAATAAAATCC+GGG - chr1_1:78935567-78935586 Msa0046660:intron 35.0%
TCACATATTTCACACTTTCC+CGG + chr1_1:78935588-78935607 None:intergenic 35.0%
GGATAAATTCCTGGATCTTA+AGG - chr1_1:78935627-78935646 Msa0046660:intron 35.0%
ACTTCTGATCCTGATTACAA+AGG - chr1_1:78935769-78935788 Msa0046660:intron 35.0%
! ATGTTTGCTGCATCATAAAG+GGG + chr1_1:78935850-78935869 None:intergenic 35.0%
! GAATGTTTGCTGCATCATAA+AGG + chr1_1:78935852-78935871 None:intergenic 35.0%
TTAGTAAGGTCGCTAATGAA+GGG + chr1_1:78935967-78935986 None:intergenic 35.0%
TTTAGTAAGGTCGCTAATGA+AGG + chr1_1:78935968-78935987 None:intergenic 35.0%
TTTCGTACATGGGTTTAGTA+AGG + chr1_1:78935981-78936000 None:intergenic 35.0%
! CTTATCGATCTTTTCGTACA+TGG + chr1_1:78935992-78936011 None:intergenic 35.0%
ACGAAAAGATCGATAAGTAC+TGG - chr1_1:78935995-78936014 Msa0046660:intron 35.0%
! TTTGGTGATTGCTGTAGTTA+TGG - chr1_1:78936035-78936054 Msa0046660:intron 35.0%
! GGAACTTTGTTGTCAGATAA+TGG - chr1_1:78936258-78936277 Msa0046660:intron 35.0%
CAATTCAGACTTTGTCTGAT+GGG + chr1_1:78936322-78936341 None:intergenic 35.0%
GTTCCAGACTTTGATGTATT+AGG - chr1_1:78936375-78936394 Msa0046660:intron 35.0%
CAACCTAATACATCAAAGTC+TGG + chr1_1:78936381-78936400 None:intergenic 35.0%
CAGACTTTGATGTATTAGGT+TGG - chr1_1:78936379-78936398 Msa0046660:intron 35.0%
!! ACTTTGATGTATTAGGTTGG+TGG - chr1_1:78936382-78936401 Msa0046660:intron 35.0%
TGGAATAGCCAATATATCTC+GGG + chr1_1:78936448-78936467 None:intergenic 35.0%
CTGGAATAGCCAATATATCT+CGG + chr1_1:78936449-78936468 None:intergenic 35.0%
AAAGATAGAGTCAGAAGGAA+CGG + chr1_1:78936478-78936497 None:intergenic 35.0%
TACTTGTATTAGGGAAAGGT+AGG + chr1_1:78936813-78936832 None:intergenic 35.0%
CATCAAGGACTACTTGTATT+AGG + chr1_1:78936823-78936842 None:intergenic 35.0%
!! TCAATCTGATTTGTTCCATC+AGG - chr1_1:78936849-78936868 Msa0046660:intron 35.0%
!! AAATTTACGCTGATTCCTGA+TGG + chr1_1:78936867-78936886 None:intergenic 35.0%
TGAACCAAATTTGAGAGACG+CGG + chr1_1:78930720-78930739 None:intergenic 40.0%
TGAATCTGAATCTGGAAACG+CGG + chr1_1:78930872-78930891 None:intergenic 40.0%
GAAACTAGTAAGAACGATCG+CGG - chr1_1:78931050-78931069 Msa0046660:three_prime_UTR 40.0%
AAACTAGTAAGAACGATCGC+GGG - chr1_1:78931051-78931070 Msa0046660:three_prime_UTR 40.0%
CGATATAGTTGTACCGGAAA+TGG - chr1_1:78931262-78931281 Msa0046660:CDS 40.0%
GTCTCAATAGTCAATGAGCA+AGG + chr1_1:78931816-78931835 None:intergenic 40.0%
GTTAACTTCTGTGCTTTCCA+AGG - chr1_1:78932509-78932528 Msa0046660:CDS 40.0%
TATCAAGCTGTGGAAAACCT+TGG + chr1_1:78932529-78932548 None:intergenic 40.0%
ATAAGGGCAATATCAAGCTG+TGG + chr1_1:78932539-78932558 None:intergenic 40.0%
!!! TTTTTTGGGTAAAGCAGGAG+AGG - chr1_1:78933351-78933370 Msa0046660:CDS 40.0%
AGCTACTTCACCTTCTTCAA+GGG + chr1_1:78933397-78933416 None:intergenic 40.0%
TAGCTACTTCACCTTCTTCA+AGG + chr1_1:78933398-78933417 None:intergenic 40.0%
! CGTCTCATCTTTTACATCAG+GGG + chr1_1:78933424-78933443 None:intergenic 40.0%
TGGGTTACAAGATCATTGCT+AGG + chr1_1:78933537-78933556 None:intergenic 40.0%
TAGCAATGATCTTGTAACCC+AGG - chr1_1:78933536-78933555 Msa0046660:CDS 40.0%
GGTAGTGATTCAGAAATCTC+TGG + chr1_1:78933618-78933637 None:intergenic 40.0%
TCACTACCCAAAAACCAAGT+TGG - chr1_1:78933630-78933649 Msa0046660:CDS 40.0%
!! TGATCGCCAACTTGGTTTTT+GGG + chr1_1:78933639-78933658 None:intergenic 40.0%
!! TTGATCGCCAACTTGGTTTT+TGG + chr1_1:78933640-78933659 None:intergenic 40.0%
GAACAAACCACACCTTTGTT+TGG + chr1_1:78933744-78933763 None:intergenic 40.0%
AAGCACAGCACAACAATGAA+GGG - chr1_1:78933832-78933851 Msa0046660:CDS 40.0%
TGAAGCACAACACACAAATG+AGG - chr1_1:78933866-78933885 Msa0046660:CDS 40.0%
! TGAACCACATTGTGATGATG+AGG - chr1_1:78934001-78934020 Msa0046660:CDS 40.0%
GAAAAAACTACCTCACTGCT+CGG + chr1_1:78934110-78934129 None:intergenic 40.0%
TATTGAGACTGTCATGTACG+AGG - chr1_1:78934145-78934164 Msa0046660:CDS 40.0%
TAATGAGACCGTATTGCATG+AGG - chr1_1:78934178-78934197 Msa0046660:CDS 40.0%
AATTTGCGCCTCATGCAATA+CGG + chr1_1:78934189-78934208 None:intergenic 40.0%
AGGCAGAAATCTGCAATGAT+GGG - chr1_1:78934231-78934250 Msa0046660:CDS 40.0%
GAATTGGCTAACTCATTCTC+AGG + chr1_1:78934275-78934294 None:intergenic 40.0%
GTTGGGATCCATTGTAGAAT+TGG + chr1_1:78934291-78934310 None:intergenic 40.0%
TGATGGGATAGCTGATTGTT+GGG + chr1_1:78934308-78934327 None:intergenic 40.0%
TTGATGGGATAGCTGATTGT+TGG + chr1_1:78934309-78934328 None:intergenic 40.0%
TACTCTTGCAAGTGATTGTG+GGG + chr1_1:78934389-78934408 None:intergenic 40.0%
CATACTCTTGCAAGTGATTG+TGG + chr1_1:78934391-78934410 None:intergenic 40.0%
TGATTGTCCAGATGACTGTT+CGG + chr1_1:78934422-78934441 None:intergenic 40.0%
TTTCAGAGTTAGGCAACTGA+TGG + chr1_1:78934460-78934479 None:intergenic 40.0%
AACACTTCACAACAATCAGC+TGG - chr1_1:78934544-78934563 Msa0046660:intron 40.0%
! CAAACTTTTGCCTACAGTAC+TGG - chr1_1:78934776-78934795 Msa0046660:intron 40.0%
!! AGTACTGGTTCAAAAGTTGC+TGG - chr1_1:78934791-78934810 Msa0046660:intron 40.0%
AATTATGTAAGGTGTGCTGG+CGG + chr1_1:78934966-78934985 None:intergenic 40.0%
AAAGGTCACCATGTTGAACT+GGG + chr1_1:78935101-78935120 None:intergenic 40.0%
TAAAGGTCACCATGTTGAAC+TGG + chr1_1:78935102-78935121 None:intergenic 40.0%
!! ATAGCCTACAGATTGACTTG+AGG + chr1_1:78935233-78935252 None:intergenic 40.0%
TATCTGCCTGCATTTCTGAT+TGG - chr1_1:78935362-78935381 Msa0046660:intron 40.0%
! TAGAGGTCTAAGGTTCTCAA+GGG + chr1_1:78935443-78935462 None:intergenic 40.0%
ATCACACGAGGATAAATTCC+TGG - chr1_1:78935618-78935637 Msa0046660:intron 40.0%
!! AGGATCAGAAGTGTCTAAAC+AGG + chr1_1:78935761-78935780 None:intergenic 40.0%
! TTTCCAGTCTGGAATAGATG+GGG + chr1_1:78935797-78935816 None:intergenic 40.0%
! GTTTCCAGTCTGGAATAGAT+GGG + chr1_1:78935798-78935817 None:intergenic 40.0%
! AGTTTCCAGTCTGGAATAGA+TGG + chr1_1:78935799-78935818 None:intergenic 40.0%
ATCTCAACAAGTTTCCAGTC+TGG + chr1_1:78935808-78935827 None:intergenic 40.0%
ACAAGCTTCATCTTGAAACG+AGG + chr1_1:78936063-78936082 None:intergenic 40.0%
TTTCACAAAAATCTACGGCG+AGG - chr1_1:78936092-78936111 Msa0046660:intron 40.0%
TTTCCTTCTTCTGCATATGC+CGG + chr1_1:78936201-78936220 None:intergenic 40.0%
TATGCAGAAGAAGGAAATGC+TGG - chr1_1:78936204-78936223 Msa0046660:intron 40.0%
TGCTGGAAGCAATATGAAGA+TGG - chr1_1:78936221-78936240 Msa0046660:intron 40.0%
GGAAGCAATATGAAGATGGA+AGG - chr1_1:78936225-78936244 Msa0046660:intron 40.0%
AGACTTTGATGCCTACATCA+TGG - chr1_1:78936287-78936306 Msa0046660:intron 40.0%
GGTAGAAGTTTCCATGATGT+AGG + chr1_1:78936301-78936320 None:intergenic 40.0%
CCAATTCAGACTTTGTCTGA+TGG + chr1_1:78936323-78936342 None:intergenic 40.0%
CCATCAGACAAAGTCTGAAT+TGG - chr1_1:78936320-78936339 Msa0046660:intron 40.0%
GTCTGAATTGGATCAGTATC+TGG - chr1_1:78936332-78936351 Msa0046660:intron 40.0%
TTCAACTGCGCTTGTGAAAA+TGG - chr1_1:78936605-78936624 Msa0046660:intron 40.0%
TACACTTGTACCCAGTATGT+TGG - chr1_1:78936650-78936669 Msa0046660:intron 40.0%
GTAGAACCTACCAACATACT+GGG + chr1_1:78936663-78936682 None:intergenic 40.0%
AGTAGAACCTACCAACATAC+TGG + chr1_1:78936664-78936683 None:intergenic 40.0%
GGACTACTTGTATTAGGGAA+AGG + chr1_1:78936817-78936836 None:intergenic 40.0%
CAGGAATCAGCGTAAATTTG+AGG - chr1_1:78936868-78936887 Msa0046660:intron 40.0%
GAATCAGCGTAAATTTGAGG+TGG - chr1_1:78936871-78936890 Msa0046660:intron 40.0%
TAGGGAAAACTGTGTGTCTT+TGG - chr1_1:78937040-78937059 Msa0046660:five_prime_UTR 40.0%
GAGAGAGAGAGAGAGAGATT+GGG + chr1_1:78930773-78930792 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAT+TGG + chr1_1:78930774-78930793 None:intergenic 45.0%
! CCATTGCAGCAACGTTTTGT+CGG + chr1_1:78931218-78931237 None:intergenic 45.0%
GAGCTTGATCACCAAGGTAA+TGG - chr1_1:78931613-78931632 Msa0046660:CDS 45.0%
!! CACCAAGGTAATGGACAATG+AGG - chr1_1:78931622-78931641 Msa0046660:CDS 45.0%
TTATTACTTCATGGCCGGAC+AGG + chr1_1:78932142-78932161 None:intergenic 45.0%
TGGCAATTGTTGCAGGCATA+TGG - chr1_1:78932474-78932493 Msa0046660:CDS 45.0%
AGGCATATGGCAGTAGAAGA+AGG - chr1_1:78932487-78932506 Msa0046660:CDS 45.0%
TGTGAAGCATGTAACCCTCA+AGG - chr1_1:78932662-78932681 Msa0046660:CDS 45.0%
GTGAAGCATGTAACCCTCAA+GGG - chr1_1:78932663-78932682 Msa0046660:CDS 45.0%
TACCACTACTATCGTGTCTC+TGG - chr1_1:78933029-78933048 Msa0046660:CDS 45.0%
ACCACTACTATCGTGTCTCT+GGG - chr1_1:78933030-78933049 Msa0046660:CDS 45.0%
AGTTCAGTGCCATATGTGCA+TGG - chr1_1:78933086-78933105 Msa0046660:CDS 45.0%
GAGAGGATATACTGACAGGA+TGG - chr1_1:78933368-78933387 Msa0046660:CDS 45.0%
GACGATCAATGTCGACAAGA+TGG - chr1_1:78933440-78933459 Msa0046660:CDS 45.0%
GATCTTGTAACCCAGGTTAC+TGG - chr1_1:78933543-78933562 Msa0046660:CDS 45.0%
! TGGTGGTGATGCAAATGTGT+TGG - chr1_1:78933563-78933582 Msa0046660:CDS 45.0%
! AACCAAGTTGGCGATCAACT+TGG - chr1_1:78933642-78933661 Msa0046660:CDS 45.0%
TCTTGACAAGTCTACCACTG+AGG - chr1_1:78933680-78933699 Msa0046660:CDS 45.0%
!! TCTGAGGCATTGCCAAACAA+AGG - chr1_1:78933729-78933748 Msa0046660:CDS 45.0%
TGAAACACAGCACAGCAATG+AGG - chr1_1:78933797-78933816 Msa0046660:CDS 45.0%
TCATTGTTGTGCTGTGCTTC+AGG + chr1_1:78933831-78933850 None:intergenic 45.0%
GAAGCACAGCACAACAATGA+AGG - chr1_1:78933831-78933850 Msa0046660:CDS 45.0%
AGCACAGCACAACAATGAAG+GGG - chr1_1:78933833-78933852 Msa0046660:CDS 45.0%
AGCACAACACACAAATGAGG+AGG - chr1_1:78933869-78933888 Msa0046660:CDS 45.0%
CACAAATGAGGAGGTTGCAT+CGG - chr1_1:78933878-78933897 Msa0046660:CDS 45.0%
TGAAGCACAGCACAACAATG+AGG - chr1_1:78933830-78933849 Msa0046660:CDS 45.0%
! ACCACATTGTGATGATGAGG+TGG - chr1_1:78934004-78934023 Msa0046660:CDS 45.0%
ACCACCTCATCATCACAATG+TGG + chr1_1:78934008-78934027 None:intergenic 45.0%
GACATTACCACCTCACTGAT+GGG + chr1_1:78934047-78934066 None:intergenic 45.0%
AGACATTACCACCTCACTGA+TGG + chr1_1:78934048-78934067 None:intergenic 45.0%
TGACTCACAGCAGAACAATG+TGG - chr1_1:78934067-78934086 Msa0046660:CDS 45.0%
GAGGCAGAAATCTGCAATGA+TGG - chr1_1:78934230-78934249 Msa0046660:CDS 45.0%
GGCAGAAATCTGCAATGATG+GGG - chr1_1:78934232-78934251 Msa0046660:CDS 45.0%
TGCAAGTGATTGTGGGGTAT+TGG + chr1_1:78934383-78934402 None:intergenic 45.0%
CAGTCATCTGGACAATCATG+AGG - chr1_1:78934424-78934443 Msa0046660:intron 45.0%
GGGGTATGCTCTTCATTGTT+TGG + chr1_1:78934647-78934666 None:intergenic 45.0%
TCTTACTTGGCTGTGTCTCT+GGG + chr1_1:78934667-78934686 None:intergenic 45.0%
ACCATAGAAACAGTTAGCGC+TGG - chr1_1:78934722-78934741 Msa0046660:intron 45.0%
!! TCCAGCGCTAACTGTTTCTA+TGG + chr1_1:78934726-78934745 None:intergenic 45.0%
! AGTTAGCGCTGGATGTAGAA+GGG - chr1_1:78934733-78934752 Msa0046660:intron 45.0%
! ATGTAGAAGGGCATGTTGCA+AGG - chr1_1:78934745-78934764 Msa0046660:intron 45.0%
CTTAAACGGCACATTGCCAA+GGG - chr1_1:78934824-78934843 Msa0046660:intron 45.0%
TTAAACGGCACATTGCCAAG+GGG - chr1_1:78934825-78934844 Msa0046660:intron 45.0%
! GTATATGGGGCATGCTGATT+TGG + chr1_1:78934881-78934900 None:intergenic 45.0%
GTTGTCGTCATGAGATTGCT+AGG - chr1_1:78934999-78935018 Msa0046660:intron 45.0%
TGGATGCTCAACCATGTGAA+GGG + chr1_1:78935047-78935066 None:intergenic 45.0%
CGGACAAATGCAACAAATCC+TGG + chr1_1:78935067-78935086 None:intergenic 45.0%
TGAACTGGGGTTGCAGATTT+CGG + chr1_1:78935087-78935106 None:intergenic 45.0%
AAGGTCACCATGTTGAACTG+GGG + chr1_1:78935100-78935119 None:intergenic 45.0%
CTGTGTCGCAACTTACTTGA+CGG - chr1_1:78935138-78935157 Msa0046660:intron 45.0%
! GATGAGTTACCAGGACGTTT+TGG - chr1_1:78935187-78935206 Msa0046660:intron 45.0%
TTGGTCTGACACTGGATATG+TGG - chr1_1:78935206-78935225 Msa0046660:five_prime_UTR 45.0%
TGGACCTCAAGTCAATCTGT+AGG - chr1_1:78935226-78935245 Msa0046660:five_prime_UTR 45.0%
TGAGAGCAGAGTCAGAATCA+GGG + chr1_1:78935333-78935352 None:intergenic 45.0%
CTGATTGGAATTTGGAGGGT+AGG - chr1_1:78935377-78935396 Msa0046660:intron 45.0%
TCAAGGGCAACTTCAGTAAG+TGG + chr1_1:78935427-78935446 None:intergenic 45.0%
! GTAGAGGTCTAAGGTTCTCA+AGG + chr1_1:78935444-78935463 None:intergenic 45.0%
TCACAGAGAGTAGAGGTCTA+AGG + chr1_1:78935453-78935472 None:intergenic 45.0%
GGATTCTTCACAGAGAGTAG+AGG + chr1_1:78935460-78935479 None:intergenic 45.0%
!! GATTTGTTGAGCTCAGCACA+AGG - chr1_1:78935547-78935566 Msa0046660:intron 45.0%
GAAGACTTCAGAATCACACG+AGG - chr1_1:78935606-78935625 Msa0046660:intron 45.0%
!! GAAGGTGTTCCTTAAGATCC+AGG + chr1_1:78935639-78935658 None:intergenic 45.0%
GGATCTTAAGGAACACCTTC+AGG - chr1_1:78935639-78935658 Msa0046660:intron 45.0%
! TCTTTTCACTGGGAACCTGA+AGG + chr1_1:78935657-78935676 None:intergenic 45.0%
GTACTGGAGAGATTGTAGTC+TGG - chr1_1:78936011-78936030 Msa0046660:intron 45.0%
! GAGAGATTGTAGTCTGGCTT+TGG - chr1_1:78936017-78936036 Msa0046660:intron 45.0%
ATGAAGATGGAAGGATCCTC+TGG - chr1_1:78936234-78936253 Msa0046660:intron 45.0%
TGACAACAAAGTTCCTCCAG+AGG + chr1_1:78936253-78936272 None:intergenic 45.0%
! ACATCAAAGTCTGGAACTCG+TGG + chr1_1:78936372-78936391 None:intergenic 45.0%
CAATATATCTCGGGCCATCT+TGG + chr1_1:78936439-78936458 None:intergenic 45.0%
CAAGATGGCCCGAGATATAT+TGG - chr1_1:78936437-78936456 Msa0046660:intron 45.0%
TCAGAAGGAACGGTAGAAAC+TGG + chr1_1:78936468-78936487 None:intergenic 45.0%
ACCATACTGCATCCAGTCTT+TGG + chr1_1:78936574-78936593 None:intergenic 45.0%
ACAAGCGCAGTTGAAGATTC+GGG + chr1_1:78936600-78936619 None:intergenic 45.0%
CACAAGCGCAGTTGAAGATT+CGG + chr1_1:78936601-78936620 None:intergenic 45.0%
CTTGTACCCAGTATGTTGGT+AGG - chr1_1:78936654-78936673 Msa0046660:intron 45.0%
TCAGATTGAGCTGCACATCA+AGG + chr1_1:78936838-78936857 None:intergenic 45.0%
! GCACACTTTTGCTTTGCCAT+TGG - chr1_1:78936964-78936983 Msa0046660:five_prime_UTR 45.0%
CTGAATCTGGAAACGCGGAA+CGG + chr1_1:78930867-78930886 None:intergenic 50.0%
! GCAGCAACGTTTTGTCGGAT+AGG + chr1_1:78931213-78931232 None:intergenic 50.0%
CCGACAAAACGTTGCTGCAA+TGG - chr1_1:78931215-78931234 Msa0046660:CDS 50.0%
GGCCTCATTGTCCATTACCT+TGG + chr1_1:78931627-78931646 None:intergenic 50.0%
CGAGCACATGCATTCTGCTA+TGG - chr1_1:78932596-78932615 Msa0046660:CDS 50.0%
GCAGGAGAGGATATACTGAC+AGG - chr1_1:78933364-78933383 Msa0046660:CDS 50.0%
AGGATGGCTACCCTTGAAGA+AGG - chr1_1:78933384-78933403 Msa0046660:CDS 50.0%
CTTGTAACCCAGGTTACTGG+TGG - chr1_1:78933546-78933565 Msa0046660:CDS 50.0%
TGCATCACCACCAGTAACCT+GGG + chr1_1:78933556-78933575 None:intergenic 50.0%
TTGCATCACCACCAGTAACC+TGG + chr1_1:78933557-78933576 None:intergenic 50.0%
!! CACCAAGTTGATCGCCAACT+TGG + chr1_1:78933647-78933666 None:intergenic 50.0%
GAATCGACCACATGGATGCT+GGG + chr1_1:78933711-78933730 None:intergenic 50.0%
AGAATCGACCACATGGATGC+TGG + chr1_1:78933712-78933731 None:intergenic 50.0%
! CATCCATGTGGTCGATTCTG+AGG - chr1_1:78933713-78933732 Msa0046660:CDS 50.0%
ATGCCTCAGAATCGACCACA+TGG + chr1_1:78933719-78933738 None:intergenic 50.0%
GGCATTGCCAAACAAAGGTG+TGG - chr1_1:78933734-78933753 Msa0046660:CDS 50.0%
ACAGCACAGCAATGAGGATG+CGG - chr1_1:78933803-78933822 Msa0046660:CDS 50.0%
AGCACAGCACAACAATGAGG+AGG - chr1_1:78933971-78933990 Msa0046660:CDS 50.0%
GATTTCTGCCTCGTGCATGA+CGG + chr1_1:78934222-78934241 None:intergenic 50.0%
! ATGGGGTTGCATCTGAAGCT+CGG - chr1_1:78934249-78934268 Msa0046660:CDS 50.0%
TACGCATCCGAACAGTCATC+TGG - chr1_1:78934412-78934431 Msa0046660:intron 50.0%
TCTGGACAATCATGAGGCAC+TGG - chr1_1:78934430-78934449 Msa0046660:intron 50.0%
!! GGCGAGAGTGTTTCAGAGTT+AGG + chr1_1:78934470-78934489 None:intergenic 50.0%
! TGGGAATTGGCTAGCTGATC+AGG + chr1_1:78934491-78934510 None:intergenic 50.0%
CTTACTTGGCTGTGTCTCTG+GGG + chr1_1:78934666-78934685 None:intergenic 50.0%
CTCTTACTTGGCTGTGTCTC+TGG + chr1_1:78934668-78934687 None:intergenic 50.0%
CAGAGACACAGCCAAGTAAG+AGG - chr1_1:78934666-78934685 Msa0046660:intron 50.0%
AGACACAGCCAAGTAAGAGG+AGG - chr1_1:78934669-78934688 Msa0046660:intron 50.0%
! CAGTTAGCGCTGGATGTAGA+AGG - chr1_1:78934732-78934751 Msa0046660:intron 50.0%
CTGGTACCAGCCACCTTAAA+CGG - chr1_1:78934810-78934829 Msa0046660:intron 50.0%
!! AATGTGCCGTTTAAGGTGGC+TGG + chr1_1:78934819-78934838 None:intergenic 50.0%
!! TGGCAATGTGCCGTTTAAGG+TGG + chr1_1:78934823-78934842 None:intergenic 50.0%
!! CCTTGGCAATGTGCCGTTTA+AGG + chr1_1:78934826-78934845 None:intergenic 50.0%
CCTTAAACGGCACATTGCCA+AGG - chr1_1:78934823-78934842 Msa0046660:intron 50.0%
TAAACGGCACATTGCCAAGG+GGG - chr1_1:78934826-78934845 Msa0046660:intron 50.0%
CCAAACTACGCAGAAGAGCT+GGG + chr1_1:78934856-78934875 None:intergenic 50.0%
TCCAAACTACGCAGAAGAGC+TGG + chr1_1:78934857-78934876 None:intergenic 50.0%
CCTTGAACGTGGGGTATATG+GGG + chr1_1:78934894-78934913 None:intergenic 50.0%
CCCTTGAACGTGGGGTATAT+GGG + chr1_1:78934895-78934914 None:intergenic 50.0%
CCCATATACCCCACGTTCAA+GGG - chr1_1:78934892-78934911 Msa0046660:intron 50.0%
CCATATACCCCACGTTCAAG+GGG - chr1_1:78934893-78934912 Msa0046660:intron 50.0%
! GCGGTTCTGTATCGTCGTTT+TGG + chr1_1:78934947-78934966 None:intergenic 50.0%
GCATGATTACCCCCTTCACA+TGG - chr1_1:78935033-78935052 Msa0046660:intron 50.0%
GATGCTCAACCATGTGAAGG+GGG + chr1_1:78935045-78935064 None:intergenic 50.0%
GGATGCTCAACCATGTGAAG+GGG + chr1_1:78935046-78935065 None:intergenic 50.0%
CTGGATGCTCAACCATGTGA+AGG + chr1_1:78935048-78935067 None:intergenic 50.0%
CTTCACATGGTTGAGCATCC+AGG - chr1_1:78935046-78935065 Msa0046660:intron 50.0%
TCTGCAACCCCAGTTCAACA+TGG - chr1_1:78935090-78935109 Msa0046660:intron 50.0%
AGTGTCAGACCAAAACGTCC+TGG + chr1_1:78935199-78935218 None:intergenic 50.0%
!! AGGACGTTTTGGTCTGACAC+TGG - chr1_1:78935198-78935217 Msa0046660:five_prime_UTR 50.0%
CTGAGAGCAGAGTCAGAATC+AGG + chr1_1:78935334-78935353 None:intergenic 50.0%
GGTTGCAGCTTCTGAACTGA+AGG - chr1_1:78935726-78935745 Msa0046660:intron 50.0%
GATGGGGCTCCTTTGTAATC+AGG + chr1_1:78935781-78935800 None:intergenic 50.0%
GGGGCTTCAAGTATGTGCAA+AGG + chr1_1:78935831-78935850 None:intergenic 50.0%
! TCTGCATATGCCGGTGTTAG+TGG + chr1_1:78936192-78936211 None:intergenic 50.0%
ACACCGGCATATGCAGAAGA+AGG - chr1_1:78936195-78936214 Msa0046660:intron 50.0%
AAGATGGAAGGATCCTCTGG+AGG - chr1_1:78936237-78936256 Msa0046660:intron 50.0%
GTACCCCACACTTTCCAAGA+TGG - chr1_1:78936422-78936441 Msa0046660:intron 50.0%
CACTTGTGTGTGCCAAAGAC+TGG - chr1_1:78936559-78936578 Msa0046660:intron 50.0%
GCCAAAGACTGGATGCAGTA+TGG - chr1_1:78936570-78936589 Msa0046660:intron 50.0%
! TTTTACTGGGACTGCTCTCG+TGG - chr1_1:78937003-78937022 Msa0046660:five_prime_UTR 50.0%
TTTACTGGGACTGCTCTCGT+GGG - chr1_1:78937004-78937023 Msa0046660:five_prime_UTR 50.0%
!! GTGGGGTGGAGTACTGTTTA+GGG - chr1_1:78937022-78937041 Msa0046660:five_prime_UTR 50.0%
! AGTGGCGGAAGCGAGATCTT+GGG + chr1_1:78930807-78930826 None:intergenic 55.0%
! AAGTGGCGGAAGCGAGATCT+TGG + chr1_1:78930808-78930827 None:intergenic 55.0%
AATCTGGAAACGCGGAACGG+CGG + chr1_1:78930864-78930883 None:intergenic 55.0%
GCCCAGAGACACGATAGTAG+TGG + chr1_1:78933034-78933053 None:intergenic 55.0%
TGAAGCACAGCCCATCAGTG+AGG - chr1_1:78934034-78934053 Msa0046660:CDS 55.0%
CCCAGCTCTTCTGCGTAGTT+TGG - chr1_1:78934853-78934872 Msa0046660:intron 55.0%
CCCCATATACCCCACGTTCA+AGG - chr1_1:78934891-78934910 Msa0046660:intron 55.0%
CCCCTTGAACGTGGGGTATA+TGG + chr1_1:78934896-78934915 None:intergenic 55.0%
ACCACTTCCCCTTGAACGTG+GGG + chr1_1:78934903-78934922 None:intergenic 55.0%
CACCACTTCCCCTTGAACGT+GGG + chr1_1:78934904-78934923 None:intergenic 55.0%
GCAGAGTCAGAATCAGGGCA+TGG + chr1_1:78935328-78935347 None:intergenic 55.0%
GAGCCCCATCTATTCCAGAC+TGG - chr1_1:78935791-78935810 Msa0046660:intron 55.0%
! CGGTGTTAGTGGCAGAGGAA+GGG + chr1_1:78936181-78936200 None:intergenic 55.0%
CCTTCCTCTGCCACTAACAC+CGG - chr1_1:78936179-78936198 Msa0046660:intron 55.0%
! TATGCCGGTGTTAGTGGCAG+AGG + chr1_1:78936186-78936205 None:intergenic 55.0%
! GGGCCATCTTGGAAAGTGTG+GGG + chr1_1:78936428-78936447 None:intergenic 55.0%
! CGGGCCATCTTGGAAAGTGT+GGG + chr1_1:78936429-78936448 None:intergenic 55.0%
TCGGGCCATCTTGGAAAGTG+TGG + chr1_1:78936430-78936449 None:intergenic 55.0%
TTCCTTGCGTCCAGAGACAG+TGG - chr1_1:78936533-78936552 Msa0046660:intron 55.0%
ACAAGTGCCTCCACTGTCTC+TGG + chr1_1:78936546-78936565 None:intergenic 55.0%
TTACTGGGACTGCTCTCGTG+GGG - chr1_1:78937005-78937024 Msa0046660:five_prime_UTR 55.0%
!! CGTGGGGTGGAGTACTGTTT+AGG - chr1_1:78937021-78937040 Msa0046660:five_prime_UTR 55.0%
TCGACCACATGGATGCTGGG+TGG + chr1_1:78933708-78933727 None:intergenic 60.0%
AGCACAGCCCATCAGTGAGG+TGG - chr1_1:78934037-78934056 Msa0046660:CDS 60.0%
TGATTCGCAGCCGAGCAGTG+AGG - chr1_1:78934097-78934116 Msa0046660:CDS 60.0%
CGATGAAGCCGTCATGCACG+AGG - chr1_1:78934211-78934230 Msa0046660:CDS 60.0%
ACTACGCAGAAGAGCTGGGC+AGG + chr1_1:78934852-78934871 None:intergenic 60.0%
ACCCCACGTTCAAGGGGAAG+TGG - chr1_1:78934899-78934918 Msa0046660:intron 60.0%
GCACCACTTCCCCTTGAACG+TGG + chr1_1:78934905-78934924 None:intergenic 60.0%
! CCGGTGTTAGTGGCAGAGGA+AGG + chr1_1:78936182-78936201 None:intergenic 60.0%
CTCCACTGTCTCTGGACGCA+AGG + chr1_1:78936538-78936557 None:intergenic 60.0%
CTTGCGTCCAGAGACAGTGG+AGG - chr1_1:78936536-78936555 Msa0046660:intron 60.0%
CTTCCGCCACTTCCGCAGCT+CGG - chr1_1:78930816-78930835 Msa0046660:three_prime_UTR 65.0%
GAACCGAGCTGCGGAAGTGG+CGG + chr1_1:78930822-78930841 None:intergenic 65.0%
TCGGAACCGAGCTGCGGAAG+TGG + chr1_1:78930825-78930844 None:intergenic 65.0%
GGAAGCTCGGAACCGAGCTG+CGG + chr1_1:78930831-78930850 None:intergenic 65.0%
GATGCTGGGTGGTGCCTCAG+TGG + chr1_1:78933697-78933716 None:intergenic 65.0%
GGCACCACCCAGCATCCATG+TGG - chr1_1:78933701-78933720 Msa0046660:CDS 65.0%
CGGTTCCGAGCTTCCGCTCC+CGG - chr1_1:78930836-78930855 Msa0046660:three_prime_UTR 70.0%
AAACGCGGAACGGCGGTGCC+GGG + chr1_1:78930857-78930876 None:intergenic 70.0%
GAAACGCGGAACGGCGGTGC+CGG + chr1_1:78930858-78930877 None:intergenic 70.0%
AAGAGCTGGGCAGGCCCCCT+TGG + chr1_1:78934843-78934862 None:intergenic 70.0%
CTGGGACTGCTCTCGTGGGG+TGG - chr1_1:78937008-78937027 Msa0046660:five_prime_UTR 70.0%
! CGGTGCCGGGAGCGGAAGCT+CGG + chr1_1:78930844-78930863 None:intergenic 75.0%
!! CGGAACGGCGGTGCCGGGAG+CGG + chr1_1:78930852-78930871 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 78930716 78937063 78930716 ID=Msa0046660;Name=Msa0046660
chr1_1 mRNA 78930716 78937063 78930716 ID=Msa0046660-mRNA-1;Parent=Msa0046660;Name=Msa0046660-mRNA-1;_AED=0.00;_eAED=0.00;_QI=305|1|1|1|0.5|0.66|3|428|1082
chr1_1 exon 78930716 78934411 78930716 ID=Msa0046660-mRNA-1:exon:27187;Parent=Msa0046660-mRNA-1
chr1_1 exon 78935196 78935290 78935196 ID=Msa0046660-mRNA-1:exon:27186;Parent=Msa0046660-mRNA-1
chr1_1 exon 78936873 78937063 78936873 ID=Msa0046660-mRNA-1:exon:27185;Parent=Msa0046660-mRNA-1
chr1_1 five_prime_UTR 78936873 78937063 78936873 ID=Msa0046660-mRNA-1:five_prime_utr;Parent=Msa0046660-mRNA-1
chr1_1 five_prime_UTR 78935196 78935290 78935196 ID=Msa0046660-mRNA-1:five_prime_utr;Parent=Msa0046660-mRNA-1
chr1_1 five_prime_UTR 78934393 78934411 78934393 ID=Msa0046660-mRNA-1:five_prime_utr;Parent=Msa0046660-mRNA-1
chr1_1 CDS 78931144 78934392 78931144 ID=Msa0046660-mRNA-1:cds;Parent=Msa0046660-mRNA-1
chr1_1 three_prime_UTR 78930716 78931143 78930716 ID=Msa0046660-mRNA-1:three_prime_utr;Parent=Msa0046660-mRNA-1
Gene Sequence

>Msa0046660

ATGGCTACCCTTGAAGAAGGTGAAGTAGCTATGTCCCCTGATGTAAAAGATGAGACGATCAATGTCGACAAGATGGATGTCTTTGAAGAAGACAAATTAGCGGTGACCCATGATGTAAAACAAGAGCTAAATGGTACTGACTCTCAACCTAGCAATGATCTTGTAACCCAGGTTACTGGTGGTGATGCAAATGTGTTGGACAATGCCAAAGAATGTCAGAAAAATGAGCCAGAGATTTCTGAATCACTACCCAAAAACCAAGTTGGCGATCAACTTGGTGATTCAAAAGCTACTCTTGACAAGTCTACCACTGAGGCACCACCCAGCATCCATGTGGTCGATTCTGAGGCATTGCCAAACAAAGGTGTGGTTTGTTCTGAAATGCAGACAAGTAATGATGTGGCTGTATCTGAAACACAGCACAGCAATGAGGATGCGGTACCTGAAGCACAGCACAACAATGAAGGGGTAGCTTTATCTGAAGCACAACACACAAATGAGGAGGTTGCATCGGAAAATCAGCACAACAATGAGAGGGTGCTTGCATCTGAAACACAGCCCACTGATGAGACTATTATCTGTGAAGCACAGCACAACAATGAGGAGGTTGTATCTGAACCACATTGTGATGATGAGGTGGTCATGTCTGAAGCACAGCCCATCAGTGAGGTGGTAATGTCTGACTCACAGCAGAACAATGTGGTCTTATCTGATTCGCAGCCGAGCAGTGAGGTAGTTTTTTCTGACACACAACCCAATATTGAGACTGTCATGTACGAGGCACAAATCAGTAATGAGACCGTATTGCATGAGGCGCAAATTAGCGATGAAGCCGTCATGCACGAGGCAGAAATCTGCAATGATGGGGTTGCATCTGAAGCTCGGCCTGAGAATGAGTTAGCCAATTCTACAATGGATCCCAACAATCAGCTATCCCATCAAGAAATTCTTGATAATCATCAGTTCACAGACAGTCATAACACAGATGACAGACCAATACCCCACAATCACTTGCAAGAGTATGATACGCATCCGAACAGTCATCTGGACAATCATGAGGCACTGGACAACCATCAGTTGCCTAACTCTGAAACACTCTCGCCTGATCAGCTAGCCAATTCCCAAATGATGTCTCATTATGACCTGGCAAATAATGAAACACTTCACAACAATCAGCTGGTAAGTTCTCAAGCACACTATGAGATAGTCAATGCTAACAATTTTCCCAGCTATGAAATAGTAAATGCTGAAACTCAGCCAAACAATGAAGAGCATACCCCAGAGACACAGCCAAGTAAGAGGAGGAAAAAAAAGTCTATAGTCTGGGAACACTTTACCATAGAAACAGTTAGCGCTGGATGTAGAAGGGCATGTTGCAAGGAATGCAAACAAACTTTTGCCTACAGTACTGGTTCAAAAGTTGCTGGTACCAGCCACCTTAAACGGCACATTGCCAAGGGGGCCTGCCCAGCTCTTCTGCGTAGTTTGGATCCAAATCAGCATGCCCCATATACCCCACGTTCAAGGGGAAGTGGTGCTAGTAATGCTAGCAATACACCAAAACGACGATACAGAACCGCCAGCACACCTTACATAATTTTTGATCAAGATCGTTGTCGTCATGAGATTGCTAGGATGATCATTATGCATGATTACCCCCTTCACATGGTTGAGCATCCAGGATTTGTTGCATTTGTCCGAAATCTGCAACCCCAGTTCAACATGGTGACCTTTAATACTATTCAAGGAGACTGTGTCGCAACTTACTTGACGGAAAAGCAAAACCTTTCAAAATATTTTGATGAGTTACCAGGACGTTTTGGTCTGACACTGGATATGTGGACCTCAAGTCAATCTGTAGGCTATGTATTTATCACGGGACATTTTGTTGATAGTGACTGGAAGTTGCAGAAGAGAATTCTCAATGTTGTGATGGAACCATGCCCTGATTCTGACTCTGCTCTCAGTCATGCTGTATCTGCCTGCATTTCTGATTGGAATTTGGAGGGTAGGCTGTTCACAATTACTTGTAATCAGCCACTTACTGAAGTTGCCCTTGAGAACCTTAGACCTCTACTCTCTGTGAAGAATCCACTTATCTTCAATGGTCAGTTGCTAATTGGACATTGCATTGCCCGTACTTTAAGCAATGTTGCATATGATTTGTTGAGCTCAGCACAAGGCATTGTCAATAAAATCCGGGAAAGTGTGAAATATGTGAAGACTTCAGAATCACACGAGGATAAATTCCTGGATCTTAAGGAACACCTTCAGGTTCCCAGTGAAAAGAGCCTTTTTATTGATGACCAAACCAAATGGAATACAACATATCAAATGTTGGTTGCAGCTTCTGAACTGAAGGAAGTGTTTTCCTGTTTAGACACTTCTGATCCTGATTACAAAGGAGCCCCATCTATTCCAGACTGGAAACTTGTTGAGATCCTTTGCACATACTTGAAGCCCCTTTATGATGCAGCAAACATTCTTATGACAACAACTTATCCCACTGCTATTACATTCTTTCATGAAGTTTGGAAATTACATTTGGATCTATCTCGAGCTGTTAAGAATGAAGATCCCTTCATTAGCGACCTTACTAAACCCATGTACGAAAAGATCGATAAGTACTGGAGAGATTGTAGTCTGGCTTTGGTGATTGCTGTAGTTATGGATCCTCGTTTCAAGATGAAGCTTGTTGAATTCAGTTTCACAAAAATCTACGGCGAGGATGCTCATGCGTTTGTCAAGATTGTTGATGACGGAATTCATGAGCTGTTTCATGAGTATGCAACCCTTCCTCTGCCACTAACACCGGCATATGCAGAAGAAGGAAATGCTGGAAGCAATATGAAGATGGAAGGATCCTCTGGAGGAACTTTGTTGTCAGATAATGGTCTTACAGACTTTGATGCCTACATCATGGAAACTTCTACCCATCAGACAAAGTCTGAATTGGATCAGTATCTGGAAGAATCTCTATTGCCACGAGTTCCAGACTTTGATGTATTAGGTTGGTGGAAGCTAAACAAACTTAAGTACCCCACACTTTCCAAGATGGCCCGAGATATATTGGCTATTCCAGTTTCTACCGTTCCTTCTGACTCTATCTTTGATAAAAAGAGCAAAGAGATGGATCAGTATCGAAGTTCCTTGCGTCCAGAGACAGTGGAGGCACTTGTGTGTGCCAAAGACTGGATGCAGTATGGTGCACCCGAATCTTCAACTGCGCTTGTGAAAATGGAATTCTAG
Protein sequence

>Msa0046660

MATLEEGEVAMSPDVKDETINVDKMDVFEEDKLAVTHDVKQELNGTDSQPSNDLVTQVTGGDANVLDNAKECQKNEPEISESLPKNQVGDQLGDSKATLDKSTTEAPPSIHVVDSEALPNKGVVCSEMQTSNDVAVSETQHSNEDAVPEAQHNNEGVALSEAQHTNEEVASENQHNNERVLASETQPTDETIICEAQHNNEEVVSEPHCDDEVVMSEAQPISEVVMSDSQQNNVVLSDSQPSSEVVFSDTQPNIETVMYEAQISNETVLHEAQISDEAVMHEAEICNDGVASEARPENELANSTMDPNNQLSHQEILDNHQFTDSHNTDDRPIPHNHLQEYDTHPNSHLDNHEALDNHQLPNSETLSPDQLANSQMMSHYDLANNETLHNNQLVSSQAHYEIVNANNFPSYEIVNAETQPNNEEHTPETQPSKRRKKKSIVWEHFTIETVSAGCRRACCKECKQTFAYSTGSKVAGTSHLKRHIAKGACPALLRSLDPNQHAPYTPRSRGSGASNASNTPKRRYRTASTPYIIFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVRNLQPQFNMVTFNTIQGDCVATYLTEKQNLSKYFDELPGRFGLTLDMWTSSQSVGYVFITGHFVDSDWKLQKRILNVVMEPCPDSDSALSHAVSACISDWNLEGRLFTITCNQPLTEVALENLRPLLSVKNPLIFNGQLLIGHCIARTLSNVAYDLLSSAQGIVNKIRESVKYVKTSESHEDKFLDLKEHLQVPSEKSLFIDDQTKWNTTYQMLVAASELKEVFSCLDTSDPDYKGAPSIPDWKLVEILCTYLKPLYDAANILMTTTYPTAITFFHEVWKLHLDLSRAVKNEDPFISDLTKPMYEKIDKYWRDCSLALVIAVVMDPRFKMKLVEFSFTKIYGEDAHAFVKIVDDGIHELFHEYATLPLPLTPAYAEEGNAGSNMKMEGSSGGTLLSDNGLTDFDAYIMETSTHQTKSELDQYLEESLLPRVPDFDVLGWWKLNKLKYPTLSKMARDILAIPVSTVPSDSIFDKKSKEMDQYRSSLRPETVEALVCAKDWMQYGAPESSTALVKMEF*