Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0463590 | RHN48386.1 | 96.863 | 1084 | 32 | 2 | 1 | 1082 | 1 | 1084 | 0.0 | 2185 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0463590 | sp|Q9M2N5|DSLE_ARATH | 60.656 | 671 | 221 | 6 | 412 | 1066 | 31 | 674 | 0.0 | 873 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0463590 | A0A396H522 | 96.863 | 1084 | 32 | 2 | 1 | 1082 | 1 | 1084 | 0.0 | 2185 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000780 | Msa0463590 | -0.820186 | 7.834602e-53 | -8.615850e-47 |
Msa0034560 | Msa0463590 | 0.812711 | 3.694674e-51 | -8.615850e-47 |
Msa0037820 | Msa0463590 | -0.807431 | 5.071147e-50 | -8.615850e-47 |
Msa0044240 | Msa0463590 | 0.867631 | 1.186881e-65 | -8.615850e-47 |
Msa0046660 | Msa0463590 | 0.976204 | 2.219545e-141 | -8.615850e-47 |
Msa0047470 | Msa0463590 | -0.812180 | 4.827337e-51 | -8.615850e-47 |
Msa0050720 | Msa0463590 | -0.805821 | 1.109466e-49 | -8.615850e-47 |
Msa0071530 | Msa0463590 | 0.824187 | 9.244328e-54 | -8.615850e-47 |
Msa0084630 | Msa0463590 | -0.802528 | 5.375173e-49 | -8.615850e-47 |
Msa0084680 | Msa0463590 | -0.824474 | 7.917680e-54 | -8.615850e-47 |
Msa0090770 | Msa0463590 | 0.850775 | 1.365707e-60 | -8.615850e-47 |
Msa0092710 | Msa0463590 | -0.801426 | 9.054739e-49 | -8.615850e-47 |
Msa0103160 | Msa0463590 | -0.800794 | 1.219379e-48 | -8.615850e-47 |
Msa0143080 | Msa0463590 | -0.801162 | 1.025691e-48 | -8.615850e-47 |
Msa0162770 | Msa0463590 | 0.812869 | 3.412761e-51 | -8.615850e-47 |
Msa0164360 | Msa0463590 | -0.800047 | 1.730681e-48 | -8.615850e-47 |
Msa0183640 | Msa0463590 | 0.841506 | 4.559320e-58 | -8.615850e-47 |
Msa0185390 | Msa0463590 | -0.819869 | 9.257035e-53 | -8.615850e-47 |
Msa0197940 | Msa0463590 | 0.854350 | 1.304808e-61 | -8.615850e-47 |
Msa0200950 | Msa0463590 | 0.820656 | 6.112906e-53 | -8.615850e-47 |
Msa0207000 | Msa0463590 | -0.814615 | 1.407419e-51 | -8.615850e-47 |
Msa0218530 | Msa0463590 | 0.865961 | 4.037999e-65 | -8.615850e-47 |
Msa0218650 | Msa0463590 | 0.871519 | 6.424878e-67 | -8.615850e-47 |
Msa0227020 | Msa0463590 | 0.813667 | 2.279563e-51 | -8.615850e-47 |
Msa0238070 | Msa0463590 | 0.820367 | 7.119492e-53 | -8.615850e-47 |
Msa0376510 | Msa0463590 | -0.807267 | 5.494803e-50 | -8.615850e-47 |
Msa0377280 | Msa0463590 | -0.800953 | 1.131566e-48 | -8.615850e-47 |
Msa0382500 | Msa0463590 | -0.819611 | 1.060786e-52 | -8.615850e-47 |
Msa0401340 | Msa0463590 | -0.812680 | 3.752264e-51 | -8.615850e-47 |
Msa0416890 | Msa0463590 | 0.916440 | 1.776714e-85 | -8.615850e-47 |
Msa0417150 | Msa0463590 | -0.812956 | 3.266362e-51 | -8.615850e-47 |
Msa0425050 | Msa0463590 | -0.820594 | 6.317329e-53 | -8.615850e-47 |
Msa0430620 | Msa0463590 | -0.842324 | 2.772924e-58 | -8.615850e-47 |
Msa0432680 | Msa0463590 | -0.817565 | 3.087098e-52 | -8.615850e-47 |
Msa0440130 | Msa0463590 | 0.870040 | 1.969454e-66 | -8.615850e-47 |
Msa0448120 | Msa0463590 | -0.805750 | 1.148253e-49 | -8.615850e-47 |
Msa0463590 | Msa0524120 | -0.810069 | 1.384553e-50 | -8.615850e-47 |
Msa0463590 | Msa0526640 | 0.814409 | 1.563581e-51 | -8.615850e-47 |
Msa0463590 | Msa0546380 | -0.831264 | 1.842217e-55 | -8.615850e-47 |
Msa0463590 | Msa0550110 | -0.809414 | 1.914800e-50 | -8.615850e-47 |
Msa0463590 | Msa0553220 | 0.816089 | 6.618337e-52 | -8.615850e-47 |
Msa0463590 | Msa0562300 | 0.820430 | 6.886598e-53 | -8.615850e-47 |
Msa0463590 | Msa0564930 | -0.800858 | 1.183208e-48 | -8.615850e-47 |
Msa0463590 | Msa0578070 | 0.825483 | 4.572999e-54 | -8.615850e-47 |
Msa0463590 | Msa0607340 | 0.835754 | 1.395643e-56 | -8.615850e-47 |
Msa0463590 | Msa0609990 | -0.813018 | 3.165413e-51 | -8.615850e-47 |
Msa0463590 | Msa0618010 | -0.820113 | 8.142571e-53 | -8.615850e-47 |
Msa0463590 | Msa0619330 | -0.801287 | 9.670582e-49 | -8.615850e-47 |
Msa0463590 | Msa0634510 | 0.861355 | 1.087351e-63 | -8.615850e-47 |
Msa0463590 | Msa0637190 | 0.802055 | 6.726911e-49 | -8.615850e-47 |
Msa0463590 | Msa0642650 | -0.804910 | 1.721949e-49 | -8.615850e-47 |
Msa0463590 | Msa0647450 | 0.825631 | 4.219735e-54 | -8.615850e-47 |
Msa0463590 | Msa0651400 | -0.814652 | 1.381644e-51 | -8.615850e-47 |
Msa0463590 | Msa0655660 | 0.857270 | 1.830558e-62 | -8.615850e-47 |
Msa0463590 | Msa0657050 | -0.806860 | 6.700893e-50 | -8.615850e-47 |
Msa0463590 | Msa0703590 | -0.809527 | 1.810468e-50 | -8.615850e-47 |
Msa0463590 | Msa0704220 | -0.821629 | 3.648193e-53 | -8.615850e-47 |
Msa0463590 | Msa0709190 | -0.805926 | 1.054292e-49 | -8.615850e-47 |
Msa0463590 | Msa0714600 | -0.806597 | 7.616044e-50 | -8.615850e-47 |
Msa0463590 | Msa0717920 | 0.843808 | 1.115439e-58 | -8.615850e-47 |
Msa0463590 | Msa0733000 | -0.810349 | 1.204501e-50 | -8.615850e-47 |
Msa0463590 | Msa0769830 | -0.816746 | 4.717404e-52 | -8.615850e-47 |
Msa0463590 | Msa0774900 | 0.804481 | 2.116394e-49 | -8.615850e-47 |
Msa0463590 | Msa0813320 | 0.842839 | 2.023976e-58 | -8.615850e-47 |
Msa0463590 | Msa0828570 | -0.805464 | 1.318050e-49 | -8.615850e-47 |
Msa0463590 | Msa0848760 | -0.808110 | 3.638347e-50 | -8.615850e-47 |
Msa0463590 | Msa0861040 | 0.823716 | 1.192214e-53 | -8.615850e-47 |
Msa0463590 | Msa0865990 | 0.827117 | 1.867654e-54 | -8.615850e-47 |
Msa0463590 | Msa0867050 | 0.814551 | 1.454254e-51 | -8.615850e-47 |
Msa0463590 | Msa0878980 | 0.816274 | 6.016881e-52 | -8.615850e-47 |
Msa0463590 | Msa0907700 | -0.810896 | 9.177469e-51 | -8.615850e-47 |
Msa0463590 | Msa0909710 | -0.807430 | 5.075023e-50 | -8.615850e-47 |
Msa0463590 | Msa0925160 | -0.816319 | 5.880731e-52 | -8.615850e-47 |
Msa0463590 | Msa0934830 | -0.803774 | 2.968975e-49 | -8.615850e-47 |
Msa0463590 | Msa0955260 | -0.817802 | 2.729915e-52 | -8.615850e-47 |
Msa0463590 | Msa0971860 | -0.813183 | 2.911169e-51 | -8.615850e-47 |
Msa0463590 | Msa1058010 | -0.815728 | 7.968235e-52 | -8.615850e-47 |
Msa0463590 | Msa1066710 | 0.800715 | 1.265553e-48 | -8.615850e-47 |
Msa0463590 | Msa1072460 | 0.808754 | 2.651368e-50 | -8.615850e-47 |
Msa0463590 | Msa1080840 | -0.822162 | 2.745080e-53 | -8.615850e-47 |
Msa0463590 | Msa1102540 | -0.821536 | 3.832038e-53 | -8.615850e-47 |
Msa0463590 | Msa1118980 | -0.826835 | 2.181493e-54 | -8.615850e-47 |
Msa0463590 | Msa1123660 | 0.800176 | 1.629655e-48 | -8.615850e-47 |
Msa0463590 | Msa1125780 | -0.806762 | 7.028987e-50 | -8.615850e-47 |
Msa0463590 | Msa1125950 | -0.807537 | 4.815134e-50 | -8.615850e-47 |
Msa0463590 | Msa1132520 | -0.807560 | 4.762079e-50 | -8.615850e-47 |
Msa0463590 | Msa1157420 | 0.816792 | 4.606567e-52 | -8.615850e-47 |
Msa0463590 | Msa1166140 | 0.812672 | 3.768076e-51 | -8.615850e-47 |
Msa0463590 | Msa1166240 | 0.817822 | 2.701437e-52 | -8.615850e-47 |
Msa0463590 | Msa1171340 | -0.811891 | 5.579205e-51 | -8.615850e-47 |
Msa0463590 | Msa1171690 | -0.806310 | 8.754206e-50 | -8.615850e-47 |
Msa0463590 | Msa1210640 | -0.809219 | 2.108586e-50 | -8.615850e-47 |
Msa0463590 | Msa1210770 | -0.828430 | 9.027725e-55 | -8.615850e-47 |
Msa0463590 | Msa1236640 | 0.823511 | 1.331684e-53 | -8.615850e-47 |
Msa0463590 | Msa1262310 | -0.810069 | 1.384553e-50 | -8.615850e-47 |
Msa0463590 | Msa1292730 | -0.802000 | 6.905695e-49 | -8.615850e-47 |
Msa0463590 | Msa1299160 | -0.818720 | 1.691662e-52 | -8.615850e-47 |
Msa0463590 | Msa1335970 | 0.821896 | 3.163252e-53 | -8.615850e-47 |
Msa0463590 | Msa1347620 | -0.828123 | 1.070569e-54 | -8.615850e-47 |
Msa0463590 | Msa1367620 | 0.849310 | 3.510859e-60 | -8.615850e-47 |
Msa0463590 | Msa1381130 | -0.817389 | 3.381904e-52 | -8.615850e-47 |
Msa0463590 | Msa1386110 | 0.803799 | 2.933431e-49 | -8.615850e-47 |
Msa0463590 | Msa1388790 | 0.850703 | 1.430729e-60 | -8.615850e-47 |
Msa0463590 | Msa1395230 | 0.844400 | 7.738083e-59 | -8.615850e-47 |
Msa0463590 | Msa1396750 | 0.824949 | 6.115887e-54 | -8.615850e-47 |
Msa0463590 | Msa1403930 | 0.821491 | 3.925632e-53 | -8.615850e-47 |
Msa0463590 | Msa1410430 | 0.810070 | 1.383688e-50 | -8.615850e-47 |
Msa0463590 | Msa1415240 | 0.807919 | 3.995077e-50 | -8.615850e-47 |
Msa0463590 | Msa1418200 | -0.816859 | 4.451003e-52 | -8.615850e-47 |
Msa0463590 | Msa1420520 | -0.826295 | 2.934570e-54 | -8.615850e-47 |
Msa0463590 | Msa1432640 | -0.800822 | 1.203388e-48 | -8.615850e-47 |
Msa0463590 | Msa1447560 | -0.804159 | 2.468844e-49 | -8.615850e-47 |
Msa0463590 | Msa1449740 | -0.800997 | 1.108339e-48 | -8.615850e-47 |
Msa0463590 | Msa1453780 | 0.800918 | 1.150494e-48 | -8.615850e-47 |
Msa0463590 | Msa1458920 | -0.806278 | 8.890526e-50 | -8.615850e-47 |
Msa0463590 | Msa1464560 | -0.800212 | 1.602262e-48 | -8.615850e-47 |
Msa0242260 | Msa0463590 | 0.806178 | 9.330035e-50 | -8.615850e-47 |
Msa0246700 | Msa0463590 | 0.805904 | 1.065731e-49 | -8.615850e-47 |
Msa0258220 | Msa0463590 | 0.826907 | 2.097007e-54 | -8.615850e-47 |
Msa0258670 | Msa0463590 | 0.825011 | 5.914121e-54 | -8.615850e-47 |
Msa0259860 | Msa0463590 | 0.811161 | 8.040984e-51 | -8.615850e-47 |
Msa0261250 | Msa0463590 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
Msa0265580 | Msa0463590 | -0.803131 | 4.036394e-49 | -8.615850e-47 |
Msa0288240 | Msa0463590 | -0.838049 | 3.622166e-57 | -8.615850e-47 |
Msa0288330 | Msa0463590 | -0.825056 | 5.770091e-54 | -8.615850e-47 |
Msa0301180 | Msa0463590 | -0.805098 | 1.572633e-49 | -8.615850e-47 |
Msa0318250 | Msa0463590 | -0.824122 | 9.578727e-54 | -8.615850e-47 |
Msa0318270 | Msa0463590 | -0.828886 | 7.004420e-55 | -8.615850e-47 |
Msa0318310 | Msa0463590 | -0.821403 | 4.113999e-53 | -8.615850e-47 |
Msa0326670 | Msa0463590 | -0.807010 | 6.229237e-50 | -8.615850e-47 |
Msa0341460 | Msa0463590 | 0.802972 | 4.353190e-49 | -8.615850e-47 |
Msa0354390 | Msa0463590 | -0.804157 | 2.472190e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0463590 | MtrunA17_Chr7g0263231 | 96.863 | 1084 | 32 | 2 | 1 | 1082 | 1 | 1084 | 0.0 | 2185 |
Msa0463590 | MtrunA17_Chr7g0263261 | 78.763 | 1116 | 112 | 10 | 1 | 1082 | 1 | 1025 | 0.0 | 1732 |
Msa0463590 | MtrunA17_Chr4g0003151 | 49.774 | 663 | 308 | 9 | 421 | 1070 | 13 | 663 | 0.0 | 653 |
Msa0463590 | MtrunA17_Chr2g0333261 | 47.832 | 692 | 324 | 14 | 411 | 1082 | 22 | 696 | 0.0 | 626 |
Msa0463590 | MtrunA17_Chr2g0308821 | 38.321 | 548 | 312 | 11 | 534 | 1067 | 124 | 659 | 2.49e-124 | 395 |
Msa0463590 | MtrunA17_Chr8g0359341 | 31.649 | 673 | 421 | 10 | 418 | 1067 | 51 | 707 | 8.78e-116 | 374 |
Msa0463590 | MtrunA17_Chr8g0354631 | 28.843 | 683 | 435 | 11 | 416 | 1067 | 41 | 703 | 6.14e-91 | 308 |
Msa0463590 | MtrunA17_Chr8g0383081 | 30.241 | 539 | 349 | 10 | 538 | 1066 | 29 | 550 | 1.44e-76 | 263 |
Msa0463590 | MtrunA17_Chr4g0052681 | 29.490 | 529 | 364 | 6 | 544 | 1066 | 33 | 558 | 1.69e-76 | 264 |
Msa0463590 | MtrunA17_Chr5g0402891 | 30.165 | 547 | 353 | 11 | 539 | 1067 | 44 | 579 | 1.19e-74 | 259 |
Msa0463590 | MtrunA17_Chr8g0383041 | 29.222 | 527 | 364 | 6 | 544 | 1066 | 34 | 555 | 3.81e-73 | 254 |
Msa0463590 | MtrunA17_Chr8g0383211 | 28.209 | 670 | 400 | 20 | 428 | 1071 | 26 | 640 | 4.04e-63 | 228 |
Msa0463590 | MtrunA17_Chr8g0383071 | 33.213 | 277 | 182 | 3 | 603 | 877 | 33 | 308 | 1.11e-46 | 170 |
Msa0463590 | MtrunA17_Chr4g0053391 | 32.937 | 252 | 161 | 1 | 815 | 1066 | 1 | 244 | 1.19e-45 | 166 |
Msa0463590 | MtrunA17_Chr4g0062411 | 25.036 | 687 | 425 | 24 | 406 | 1069 | 33 | 652 | 4.45e-45 | 174 |
Msa0463590 | MtrunA17_Chr4g0052601 | 27.617 | 449 | 291 | 7 | 403 | 844 | 1 | 422 | 6.57e-45 | 168 |
Msa0463590 | MtrunA17_Chr8g0383051 | 31.317 | 281 | 186 | 5 | 544 | 820 | 46 | 323 | 1.75e-38 | 146 |
Msa0463590 | MtrunA17_Chr5g0408131 | 37.500 | 216 | 116 | 6 | 862 | 1071 | 20 | 222 | 4.02e-34 | 131 |
Msa0463590 | MtrunA17_Chr4g0052611 | 35.681 | 213 | 119 | 5 | 859 | 1067 | 6 | 204 | 2.62e-30 | 120 |
Msa0463590 | MtrunA17_Chr1g0192041 | 28.571 | 175 | 125 | 0 | 768 | 942 | 62 | 236 | 2.12e-27 | 112 |
Msa0463590 | MtrunA17_Chr8g0383061 | 31.455 | 213 | 119 | 6 | 865 | 1066 | 1 | 197 | 5.68e-21 | 93.2 |
Msa0463590 | MtrunA17_Chr8g0390371 | 51.316 | 76 | 36 | 1 | 999 | 1074 | 10 | 84 | 5.40e-18 | 80.1 |
Msa0463590 | MtrunA17_Chr3g0108001 | 42.466 | 73 | 42 | 0 | 994 | 1066 | 1 | 73 | 7.86e-17 | 77.4 |
Msa0463590 | MtrunA17_Chr8g0383181 | 27.451 | 255 | 138 | 12 | 430 | 676 | 18 | 233 | 4.61e-14 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0463590 | AT3G42170.1 | 60.656 | 671 | 221 | 6 | 412 | 1066 | 31 | 674 | 0.0 | 873 |
Msa0463590 | AT3G42170.2 | 60.507 | 671 | 222 | 6 | 412 | 1066 | 9 | 652 | 0.0 | 870 |
Msa0463590 | AT1G18560.1 | 20.916 | 655 | 454 | 18 | 431 | 1069 | 46 | 652 | 3.23e-32 | 135 |
Find 303 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTGGCAATGTGCCGTTTA+AGG | 0.157033 | 3_3:-63064168 | None:intergenic |
CTCTTACTTGGCTGTGTCTC+TGG | 0.171385 | 3_3:-63064010 | None:intergenic |
TTCAACTGCGCTTGTGAAAA+TGG | 0.184972 | 3_3:+63065950 | Msa0463590:CDS |
CTGCATTTCTGATTGGAATT+TGG | 0.193112 | 3_3:+63064714 | Msa0463590:CDS |
CCCCTTGAACGTGGGGTATA+TGG | 0.202727 | 3_3:-63064238 | None:intergenic |
GTAACATAAGAGTGATTATT+TGG | 0.208361 | 3_3:+63066065 | Msa0463590:three_prime_UTR |
CATCAAGGACTACTTGTATT+AGG | 0.218179 | 3_3:-63066165 | None:intergenic |
TTCAATGGTCAGTTGCTAAT+TGG | 0.222525 | 3_3:+63064832 | Msa0463590:CDS |
TGGTTTGGTCATCAATAAAA+AGG | 0.227762 | 3_3:-63065023 | None:intergenic |
CTTTGTAGAACTTGGAAATA+AGG | 0.239509 | 3_3:-63061897 | None:intergenic |
TTACATTCTTTCATGAAGTT+TGG | 0.253618 | 3_3:+63065244 | Msa0463590:CDS |
CAAGTTCTACAAAGCTAAAA+AGG | 0.265781 | 3_3:+63061906 | Msa0463590:five_prime_UTR |
GTATATGGGGCATGCTGATT+TGG | 0.269732 | 3_3:-63064223 | None:intergenic |
TAGGCCGCGTCTCTCAAATT+TGG | 0.280737 | 3_3:+63060018 | None:intergenic |
CGTGGGGTGGAGTACTGTTT+AGG | 0.281351 | 3_3:+63066366 | Msa0463590:three_prime_UTR |
GTTCCAGACTTTGATGTATT+AGG | 0.284211 | 3_3:+63065720 | Msa0463590:CDS |
GTCTCCTTGAATAGTATTAA+AGG | 0.286837 | 3_3:-63064461 | None:intergenic |
CCCAGCTCTTCTGCGTAGTT+TGG | 0.289995 | 3_3:+63064198 | Msa0463590:CDS |
TAGGGAAAACTATGTGTCTT+TGG | 0.296066 | 3_3:+63066385 | Msa0463590:three_prime_UTR |
TCATTGTTGTGCTGTGCTTC+AGG | 0.296894 | 3_3:-63063173 | None:intergenic |
CAAGATGGCCCGAGATATAT+TGG | 0.306113 | 3_3:+63065782 | Msa0463590:CDS |
GTACATGACAGTCTCAATAT+TGG | 0.315983 | 3_3:-63063486 | None:intergenic |
GGAACTTTGTTGTCAGATAA+TGG | 0.316486 | 3_3:+63065603 | Msa0463590:CDS |
GGGGTATGCTCTTCATTGTT+TGG | 0.319429 | 3_3:-63063989 | None:intergenic |
GGATCTTAAGGAACACCTTC+AGG | 0.324716 | 3_3:+63064984 | Msa0463590:CDS |
CACAAGCGCAGTTGAAGATT+CGG | 0.326854 | 3_3:-63065943 | None:intergenic |
TGAACTGGGGTTGCAGATTT+CGG | 0.329740 | 3_3:-63064429 | None:intergenic |
TCCAGCGCTAACTGTTTCTA+TGG | 0.333447 | 3_3:-63064068 | None:intergenic |
TGCAAGTGATTGTGGGGTAT+TGG | 0.333800 | 3_3:-63063725 | None:intergenic |
ATGAGACATCATTTGGGAAT+TGG | 0.336765 | 3_3:-63063846 | None:intergenic |
GTTGGGATCCATTGTAGAAT+TGG | 0.339691 | 3_3:-63063633 | None:intergenic |
TGAAGTTTGGAAATTACATT+TGG | 0.340740 | 3_3:+63065257 | Msa0463590:CDS |
TTGGTTCAATTAGATCTTAT+CGG | 0.342821 | 3_3:+63060037 | Msa0463590:five_prime_UTR |
CCCTTGAACGTGGGGTATAT+GGG | 0.346574 | 3_3:-63064237 | None:intergenic |
GGTCATAATGAGACATCATT+TGG | 0.356363 | 3_3:-63063853 | None:intergenic |
AGATTCAGTTGACTTATATC+TGG | 0.356459 | 3_3:+63060185 | Msa0463590:five_prime_UTR |
TCACAGAGAGTAGAGGTCTA+AGG | 0.356710 | 3_3:-63064795 | None:intergenic |
CTGAGAGCAGAGTCAGAATC+AGG | 0.358267 | 3_3:-63064676 | None:intergenic |
AGTTTCCAGTCTGGAATAGA+TGG | 0.359200 | 3_3:-63065141 | None:intergenic |
AGCATTTACTATTTCATAGC+TGG | 0.361317 | 3_3:-63063957 | None:intergenic |
GGATAAATTCCTGGATCTTA+AGG | 0.362197 | 3_3:+63064972 | Msa0463590:CDS |
GATGAGTTACCAGGACGTTT+TGG | 0.364188 | 3_3:+63064532 | Msa0463590:CDS |
GAATGTTTGCTGCATCATAA+AGG | 0.367171 | 3_3:-63065194 | None:intergenic |
GAACAAACCACACCTTTGTT+TGG | 0.368569 | 3_3:-63063086 | None:intergenic |
GTCTGAATTGGATCAGTATC+TGG | 0.369969 | 3_3:+63065677 | Msa0463590:CDS |
CCATCAGACAAAGTCTGAAT+TGG | 0.370844 | 3_3:+63065665 | Msa0463590:CDS |
TTTGTAGAACTTGGAAATAA+GGG | 0.374574 | 3_3:-63061896 | None:intergenic |
TGGGAATTGGCTAGCTGATC+AGG | 0.374885 | 3_3:-63063833 | None:intergenic |
TCACATATTTCACACTTTCC+CGG | 0.376084 | 3_3:-63064930 | None:intergenic |
TAAAGGTCACCATGTTGAAC+TGG | 0.379837 | 3_3:-63064444 | None:intergenic |
CAGTTAGCGCTGGATGTAGA+AGG | 0.380601 | 3_3:+63064077 | Msa0463590:CDS |
TTGATATGTTGTATTCCATT+TGG | 0.381932 | 3_3:-63065043 | None:intergenic |
AGTAGAACCTACCAACATAC+TGG | 0.382265 | 3_3:-63066006 | None:intergenic |
ACCATACTGCATCCAGTCTT+TGG | 0.385506 | 3_3:-63065916 | None:intergenic |
AATGTTTGCTGCATCATAAA+GGG | 0.386549 | 3_3:-63065193 | None:intergenic |
TCTTACTTGGCTGTGTCTCT+GGG | 0.386610 | 3_3:-63064009 | None:intergenic |
CTGGTACCAGCCACCTTAAA+CGG | 0.390950 | 3_3:+63064155 | Msa0463590:CDS |
TCTGCATATGCCGGTGTTAG+TGG | 0.394211 | 3_3:-63065534 | None:intergenic |
GGCGAGAGTGTTTCAGAGTT+AGG | 0.395382 | 3_3:-63063812 | None:intergenic |
TCAGAAGGAACGGTAGAAAC+TGG | 0.395592 | 3_3:-63065810 | None:intergenic |
AAGTGGCGGAAGCGAGATCT+TGG | 0.398063 | 3_3:-63060110 | None:intergenic |
TTGATGGGATAGCTGATTGT+TGG | 0.403890 | 3_3:-63063651 | None:intergenic |
GCGGTTCTGTATCGTCGTTT+TGG | 0.405020 | 3_3:-63064289 | None:intergenic |
ACAAGTGCCTCCACTGTCTC+TGG | 0.406781 | 3_3:-63065888 | None:intergenic |
GATTATCAAGAATTTCTTGA+TGG | 0.409862 | 3_3:-63063667 | None:intergenic |
ATCAAGGACTACTTGTATTA+GGG | 0.412625 | 3_3:-63066164 | None:intergenic |
GTGGGGTGGAGTACTGTTTA+GGG | 0.416262 | 3_3:+63066367 | Msa0463590:three_prime_UTR |
TGGCAATTGTTGCAGGCATA+TGG | 0.416336 | 3_3:+63061818 | Msa0463590:intron |
TTTGGTGATTGCTGTAGTTA+TGG | 0.417358 | 3_3:+63065380 | Msa0463590:CDS |
AAGTCAACTGAATCTGAATC+TGG | 0.417485 | 3_3:-63060177 | None:intergenic |
TTGCATCACCACCAGTAGCC+TGG | 0.419239 | 3_3:-63062899 | None:intergenic |
GAAACGCGGAACGGCGGTGC+CGG | 0.420994 | 3_3:-63060155 | None:intergenic |
CGGACAAATGCAACAAATCC+TGG | 0.422410 | 3_3:-63064409 | None:intergenic |
CAATATATCTCGGGCCATCT+TGG | 0.422876 | 3_3:-63065781 | None:intergenic |
TCCAAACTACGCAGAAGAGC+TGG | 0.425755 | 3_3:-63064199 | None:intergenic |
GATGGGGCTCCTTTGTAATC+AGG | 0.426405 | 3_3:-63065123 | None:intergenic |
AGGATCAGAAGTGTCTAAAC+AGG | 0.429136 | 3_3:-63065103 | None:intergenic |
TACATGACAGTCTCAATATT+GGG | 0.429229 | 3_3:-63063485 | None:intergenic |
GATGTAAAACAAGAGCTAAA+TGG | 0.431357 | 3_3:+63062843 | Msa0463590:CDS |
TGATGGGATAGCTGATTGTT+GGG | 0.433059 | 3_3:-63063650 | None:intergenic |
CCCCATATACCCCACGTTCA+AGG | 0.434780 | 3_3:+63064236 | Msa0463590:CDS |
TGGTTCAATTAGATCTTATC+GGG | 0.436544 | 3_3:+63060038 | Msa0463590:five_prime_UTR |
CACCAAGTTGATCGCCGACT+TGG | 0.436573 | 3_3:-63062989 | None:intergenic |
TCAATCTGATTTGTTCCATC+AGG | 0.439224 | 3_3:+63066194 | Msa0463590:three_prime_UTR |
CATTTCTGATTGGAATTTGG+AGG | 0.440108 | 3_3:+63064717 | Msa0463590:CDS |
TTTCGTACATGGGTTTAGTA+AGG | 0.440600 | 3_3:-63065323 | None:intergenic |
TATCTGCCTGCATTTCTGAT+TGG | 0.442754 | 3_3:+63064707 | Msa0463590:CDS |
CGGTTCCGAGCTTCCGCTCC+CGG | 0.443811 | 3_3:+63060136 | Msa0463590:five_prime_UTR |
CATACTCTTGCAAGTGATTG+TGG | 0.444583 | 3_3:-63063733 | None:intergenic |
AGAATCGACCACATGGATGC+TGG | 0.446532 | 3_3:-63063054 | None:intergenic |
TAGCTACTTCACCTTCTTCA+AGG | 0.447217 | 3_3:-63062740 | None:intergenic |
CACTTGTGTGTGCCAAAGAC+TGG | 0.449617 | 3_3:+63065904 | Msa0463590:CDS |
GTGACCTTTAATACTATTCA+AGG | 0.449805 | 3_3:+63064457 | Msa0463590:CDS |
ATCACACGAGGATAAATTCC+TGG | 0.450304 | 3_3:+63064963 | Msa0463590:CDS |
GAGAGATTGTAGTCTGGCTT+TGG | 0.451885 | 3_3:+63065362 | Msa0463590:CDS |
GAGGCAGAAATCTGCAATGA+TGG | 0.452316 | 3_3:+63063575 | Msa0463590:CDS |
CAACCTAATACATCAAAGTC+TGG | 0.454049 | 3_3:-63065723 | None:intergenic |
AAGGCATTGTCAATAAAATC+CGG | 0.454969 | 3_3:+63064911 | Msa0463590:CDS |
CTTCACATGGTTGAGCATCC+AGG | 0.454995 | 3_3:+63064391 | Msa0463590:CDS |
CCCATATACCCCACGTTCAA+GGG | 0.456337 | 3_3:+63064237 | Msa0463590:CDS |
GAAGTGTTTCATTATTTGCC+AGG | 0.457268 | 3_3:-63063874 | None:intergenic |
CGGAACGGCGGTGCCGGGAG+CGG | 0.459306 | 3_3:-63060149 | None:intergenic |
ACTACGCAGAAGAGCTGGGC+AGG | 0.459343 | 3_3:-63064194 | None:intergenic |
ATCTCAACAAGTTTCCAGTC+TGG | 0.463011 | 3_3:-63065150 | None:intergenic |
ATGTTGTATTCCATTTGGTT+TGG | 0.463820 | 3_3:-63065038 | None:intergenic |
ATGAAGATGGAAGGATCCTC+TGG | 0.464092 | 3_3:+63065579 | Msa0463590:CDS |
GCATTTACTATTTCATAGCT+GGG | 0.466040 | 3_3:-63063956 | None:intergenic |
TACGCATCCGAACAGTCATC+TGG | 0.468930 | 3_3:+63063757 | Msa0463590:CDS |
AAGAATCCACTTATCTTCAA+TGG | 0.469596 | 3_3:+63064817 | Msa0463590:CDS |
GGTAGTGATTCAGAAATCTC+TGG | 0.469638 | 3_3:-63062960 | None:intergenic |
ACAAGCGCAGTTGAAGATTC+GGG | 0.470263 | 3_3:-63065942 | None:intergenic |
AGTACTGGTTCAAAAGTTGC+TGG | 0.470825 | 3_3:+63064136 | Msa0463590:CDS |
CAGAGACACAGCCAAGTAAG+AGG | 0.475117 | 3_3:+63064011 | Msa0463590:CDS |
CTGTGTCGCAACTTACTTGA+CGG | 0.478704 | 3_3:+63064483 | Msa0463590:CDS |
GTCATAATGAGACATCATTT+GGG | 0.487942 | 3_3:-63063852 | None:intergenic |
CAGGAATCAGCGTAAATTTG+AGG | 0.488124 | 3_3:+63066213 | Msa0463590:three_prime_UTR |
CTGATTGGAATTTGGAGGGT+AGG | 0.488233 | 3_3:+63064722 | Msa0463590:CDS |
TTTAGTAAGGTCGCTAATGA+AGG | 0.488795 | 3_3:-63065310 | None:intergenic |
CAGACTTTGATGTATTAGGT+TGG | 0.489968 | 3_3:+63065724 | Msa0463590:CDS |
ATACTCTTGCAAGTGATTGT+GGG | 0.493067 | 3_3:-63063732 | None:intergenic |
GAAGCTCGGAACCGCGGAAG+TGG | 0.494352 | 3_3:-63060127 | None:intergenic |
CTGGAATAGCCAATATATCT+CGG | 0.495577 | 3_3:-63065791 | None:intergenic |
ATGAAAGAATGTAATAGCAG+TGG | 0.500974 | 3_3:-63065235 | None:intergenic |
ACGAAAAGATCGATAAGTAC+TGG | 0.501066 | 3_3:+63065340 | Msa0463590:CDS |
TTTCCTTCTTCTGCATATGC+CGG | 0.502177 | 3_3:-63065543 | None:intergenic |
ATGCAACATTGCTTAAAGTA+CGG | 0.503617 | 3_3:-63064867 | None:intergenic |
AACTGACCATTGAAGATAAG+TGG | 0.504675 | 3_3:-63064823 | None:intergenic |
AAACGCGGAACGGCGGTGCC+GGG | 0.506242 | 3_3:-63060154 | None:intergenic |
GAAGCACAGCACAACAATGA+AGG | 0.508710 | 3_3:+63063176 | Msa0463590:CDS |
GAAGGTGTTCCTTAAGATCC+AGG | 0.509466 | 3_3:-63064981 | None:intergenic |
CAAATTCCAATCAGAAATGC+AGG | 0.510230 | 3_3:-63064713 | None:intergenic |
AACCAAGTCGGCGATCAACT+TGG | 0.512138 | 3_3:+63062987 | Msa0463590:CDS |
TGCATCACCACCAGTAGCCT+GGG | 0.513326 | 3_3:-63062898 | None:intergenic |
AGACTTTGATGCCTACATCA+TGG | 0.514193 | 3_3:+63065632 | Msa0463590:CDS |
TGCAACATTGCTTAAAGTAC+GGG | 0.515335 | 3_3:-63064866 | None:intergenic |
TCGGGCCATCTTGGAAAGTG+TGG | 0.515342 | 3_3:-63065772 | None:intergenic |
GATCTTGTAACCCAGGCTAC+TGG | 0.516178 | 3_3:+63062888 | Msa0463590:CDS |
CAATTCAGACTTTGTCTGAT+GGG | 0.517662 | 3_3:-63065664 | None:intergenic |
AGTGGCGGAAGCGAGATCTT+GGG | 0.518101 | 3_3:-63060109 | None:intergenic |
ATTATCAAGAATTTCTTGAT+GGG | 0.519975 | 3_3:-63063666 | None:intergenic |
AAATTTACGCTGATTCCTGA+TGG | 0.521810 | 3_3:-63066209 | None:intergenic |
AATTTGCGCCTCATGCAATA+CGG | 0.522050 | 3_3:-63063531 | None:intergenic |
GCCAAAGACTGGATGCAGTA+TGG | 0.522224 | 3_3:+63065915 | Msa0463590:CDS |
TTTACTGGGACTGCTCTCGT+GGG | 0.522741 | 3_3:+63066349 | Msa0463590:three_prime_UTR |
GTAGAGGTCTAAGGTTCTCA+AGG | 0.523026 | 3_3:-63064786 | None:intergenic |
AAAGGTCACCATGTTGAACT+GGG | 0.524503 | 3_3:-63064443 | None:intergenic |
CGGTGCCGGGAGCGGAAGCT+CGG | 0.524953 | 3_3:-63060141 | None:intergenic |
ACCATAGAAACAGTTAGCGC+TGG | 0.526279 | 3_3:+63064067 | Msa0463590:CDS |
TTATTGATGACCAAACCAAA+TGG | 0.526661 | 3_3:+63065028 | Msa0463590:CDS |
TGCTGGAAGCAATATGAAGA+TGG | 0.526869 | 3_3:+63065566 | Msa0463590:CDS |
CCAATTCAGACTTTGTCTGA+TGG | 0.528198 | 3_3:-63065665 | None:intergenic |
ACTTTGATGTATTAGGTTGG+TGG | 0.532207 | 3_3:+63065727 | Msa0463590:CDS |
AGGCAGAAATCTGCAATGAT+GGG | 0.532322 | 3_3:+63063576 | Msa0463590:CDS |
CGGGCCATCTTGGAAAGTGT+GGG | 0.532592 | 3_3:-63065771 | None:intergenic |
CATCCATGTGGTCGATTCTG+AGG | 0.532671 | 3_3:+63063058 | Msa0463590:CDS |
GACGATCAATGTCGACAAGA+TGG | 0.533978 | 3_3:+63062785 | Msa0463590:CDS |
TTGGTCTGACACTGGATATG+TGG | 0.534582 | 3_3:+63064551 | Msa0463590:CDS |
CACCACTTCCCCTTGAACGT+GGG | 0.536001 | 3_3:-63064246 | None:intergenic |
GTTAACTTCTGTGCTTTCCA+AGG | 0.537766 | 3_3:+63061853 | Msa0463590:five_prime_UTR |
GAATTGGCTAACTCATTCTC+AGG | 0.538505 | 3_3:-63063617 | None:intergenic |
GAATACAACATATCAAATGT+TGG | 0.540376 | 3_3:+63065050 | Msa0463590:CDS |
AGACATTACCACCTCACTGA+TGG | 0.540884 | 3_3:-63063390 | None:intergenic |
ACCCCACGTTCAAGGGGAAG+TGG | 0.542848 | 3_3:+63064244 | Msa0463590:CDS |
CCGGTGTTAGTGGCAGAGGA+AGG | 0.544115 | 3_3:-63065524 | None:intergenic |
GAGAATTCTCAATGTTGTGA+TGG | 0.544510 | 3_3:+63064645 | Msa0463590:CDS |
TATGCAGAAGAAGGAAATGC+TGG | 0.545470 | 3_3:+63065549 | Msa0463590:CDS |
CTTGTACCCAGTATGTTGGT+AGG | 0.546002 | 3_3:+63065999 | Msa0463590:three_prime_UTR |
TGGAATAGCCAATATATCTC+GGG | 0.548248 | 3_3:-63065790 | None:intergenic |
GTACTGGAGAGATTGTAGTC+TGG | 0.548258 | 3_3:+63065356 | Msa0463590:CDS |
TGGATGCTCAACCATGTGAA+GGG | 0.548561 | 3_3:-63064389 | None:intergenic |
TATGCCGGTGTTAGTGGCAG+AGG | 0.549555 | 3_3:-63065528 | None:intergenic |
GAATCGACCACATGGATGCT+GGG | 0.552885 | 3_3:-63063053 | None:intergenic |
CACAAATGAGGAGGTTGCAT+CGG | 0.554818 | 3_3:+63063223 | Msa0463590:CDS |
GACATTACCACCTCACTGAT+GGG | 0.555412 | 3_3:-63063389 | None:intergenic |
GTACCCCACACTTTCCAAGA+TGG | 0.556211 | 3_3:+63065767 | Msa0463590:CDS |
CTCCACTGTCTCTGGACGCA+AGG | 0.556363 | 3_3:-63065880 | None:intergenic |
TTTCAGAGTTAGGCAACTGA+TGG | 0.556383 | 3_3:-63063802 | None:intergenic |
CCTTAAACGGCACATTGCCA+AGG | 0.556626 | 3_3:+63064168 | Msa0463590:CDS |
GTTTCCAGTCTGGAATAGAT+GGG | 0.557438 | 3_3:-63065140 | None:intergenic |
CTGGGACTGCTCTCGTGGGG+TGG | 0.557542 | 3_3:+63066353 | Msa0463590:three_prime_UTR |
AACACTTCACAACAATCAGC+TGG | 0.557702 | 3_3:+63063889 | Msa0463590:CDS |
CTTAAACGGCACATTGCCAA+GGG | 0.557966 | 3_3:+63064169 | Msa0463590:CDS |
GCTCGGAACCGCGGAAGTGG+CGG | 0.558004 | 3_3:-63060124 | None:intergenic |
TCTCGCTTCCGCCACTTCCG+CGG | 0.558397 | 3_3:+63060116 | Msa0463590:five_prime_UTR |
GTTGTCGTCATGAGATTGCT+AGG | 0.559521 | 3_3:+63064344 | Msa0463590:CDS |
TCAAGGGCAACTTCAGTAAG+TGG | 0.561947 | 3_3:-63064769 | None:intergenic |
GTAGGCTATGTATTTATCAC+GGG | 0.561984 | 3_3:+63064589 | Msa0463590:CDS |
TGTAGGCTATGTATTTATCA+CGG | 0.564616 | 3_3:+63064588 | Msa0463590:CDS |
TACACTTGTACCCAGTATGT+TGG | 0.565021 | 3_3:+63065995 | Msa0463590:three_prime_UTR |
ACACCGGCATATGCAGAAGA+AGG | 0.565672 | 3_3:+63065540 | Msa0463590:CDS |
TGAAAGAATGTAATAGCAGT+GGG | 0.566230 | 3_3:-63065234 | None:intergenic |
TCAGATTGAGCTGCACATCA+AGG | 0.567647 | 3_3:-63066180 | None:intergenic |
AAAGATAGAGTCAGAAGGAA+CGG | 0.567707 | 3_3:-63065820 | None:intergenic |
TATCAAGCTGTGGAAAACCT+TGG | 0.568184 | 3_3:-63061870 | None:intergenic |
AGCTACTTCACCTTCTTCAA+GGG | 0.568719 | 3_3:-63062739 | None:intergenic |
AATGTGCCGTTTAAGGTGGC+TGG | 0.572953 | 3_3:-63064161 | None:intergenic |
AGGCATATGGCAGTAGAAGA+AGG | 0.575314 | 3_3:+63061831 | Msa0463590:intron |
GGTAGAAGTTTCCATGATGT+AGG | 0.578747 | 3_3:-63065643 | None:intergenic |
TGATTGTCCAGATGACTGTT+CGG | 0.578967 | 3_3:-63063764 | None:intergenic |
TCTGGACAATCATGAGGCAC+TGG | 0.580433 | 3_3:+63063775 | Msa0463590:CDS |
CCAAACTACGCAGAAGAGCT+GGG | 0.580595 | 3_3:-63064198 | None:intergenic |
CCTTGAACGTGGGGTATATG+GGG | 0.581232 | 3_3:-63064236 | None:intergenic |
GGACTACTTGTATTAGGGAA+AGG | 0.581639 | 3_3:-63066159 | None:intergenic |
GGTTGCAGCTTCTGAACTGA+AGG | 0.581965 | 3_3:+63065071 | Msa0463590:CDS |
AAGCACAGCACAACAATGAA+GGG | 0.583176 | 3_3:+63063177 | Msa0463590:CDS |
CAGATAATAGTCTCATCAGT+GGG | 0.583475 | 3_3:-63063290 | None:intergenic |
GCAGGAGAGGATATACTGAC+AGG | 0.583822 | 3_3:+63062709 | Msa0463590:intron |
CTGGATGCTCAACCATGTGA+AGG | 0.584734 | 3_3:-63064390 | None:intergenic |
AGGCATTGTCAATAAAATCC+GGG | 0.586814 | 3_3:+63064912 | Msa0463590:CDS |
TACTTGTATTAGGGAAAGGT+AGG | 0.589076 | 3_3:-63066155 | None:intergenic |
AGGATGGCTACCCTTGAAGA+AGG | 0.589103 | 3_3:+63062729 | Msa0463590:exon |
TGGGTTACAAGATCATTGCT+AGG | 0.592212 | 3_3:-63062879 | None:intergenic |
AAAATCAGCACAACAATGAG+AGG | 0.594608 | 3_3:+63063246 | Msa0463590:CDS |
GGAGCGGAAGCTCGGAACCG+CGG | 0.595427 | 3_3:-63060133 | None:intergenic |
GAGCCCCATCTATTCCAGAC+TGG | 0.596543 | 3_3:+63065136 | Msa0463590:CDS |
GCACCACTTCCCCTTGAACG+TGG | 0.598034 | 3_3:-63064247 | None:intergenic |
AGTGTCAGACCAAAACGTCC+TGG | 0.599754 | 3_3:-63064541 | None:intergenic |
ATGTAGAAGGGCATGTTGCA+AGG | 0.599805 | 3_3:+63064090 | Msa0463590:CDS |
ATTTCTGATTGGAATTTGGA+GGG | 0.599904 | 3_3:+63064718 | Msa0463590:CDS |
ATGCCTCAGAATCGACCACA+TGG | 0.600176 | 3_3:-63063061 | None:intergenic |
ACATCAAAGTCTGGAACTCG+TGG | 0.601311 | 3_3:-63065714 | None:intergenic |
TACTCTTGCAAGTGATTGTG+GGG | 0.601406 | 3_3:-63063731 | None:intergenic |
TTATCAAAGATAGAGTCAGA+AGG | 0.601438 | 3_3:-63065825 | None:intergenic |
CGGTGTTAGTGGCAGAGGAA+GGG | 0.608414 | 3_3:-63065523 | None:intergenic |
ATGGGGTTGCATCTGAAGCT+CGG | 0.608998 | 3_3:+63063594 | Msa0463590:CDS |
GGAAGCAATATGAAGATGGA+AGG | 0.610164 | 3_3:+63065570 | Msa0463590:CDS |
TTCCTTGCGTCCAGAGACAG+TGG | 0.610328 | 3_3:+63065878 | Msa0463590:CDS |
TGAGAGCAGAGTCAGAATCA+GGG | 0.611674 | 3_3:-63064675 | None:intergenic |
TAGAGGTCTAAGGTTCTCAA+GGG | 0.612496 | 3_3:-63064785 | None:intergenic |
ATGTTTGCTGCATCATAAAG+GGG | 0.614314 | 3_3:-63065192 | None:intergenic |
GCAGAGTCAGAATCAGGGCA+TGG | 0.615340 | 3_3:-63064670 | None:intergenic |
ACAGCACAGCAATGAGGATG+CGG | 0.617098 | 3_3:+63063148 | Msa0463590:CDS |
CCATATACCCCACGTTCAAG+GGG | 0.617486 | 3_3:+63064238 | Msa0463590:CDS |
ACCACTTCCCCTTGAACGTG+GGG | 0.618044 | 3_3:-63064245 | None:intergenic |
CCTTCCTCTGCCACTAACAC+CGG | 0.618365 | 3_3:+63065524 | Msa0463590:CDS |
TGAAGCACAACACACAAATG+AGG | 0.619518 | 3_3:+63063211 | Msa0463590:CDS |
TTAGTAAGGTCGCTAATGAA+GGG | 0.622144 | 3_3:-63065309 | None:intergenic |
TTTGTCAAGATTGTTGATGA+CGG | 0.623110 | 3_3:+63065471 | Msa0463590:CDS |
TGGACCTCAAGTCAATCTGT+AGG | 0.623873 | 3_3:+63064571 | Msa0463590:CDS |
TGAACCAAATTTGAGAGACG+CGG | 0.625828 | 3_3:-63060022 | None:intergenic |
GGCATTGCCAAACAAAGGTG+TGG | 0.625973 | 3_3:+63063079 | Msa0463590:CDS |
AGTTAGCGCTGGATGTAGAA+GGG | 0.626392 | 3_3:+63064078 | Msa0463590:CDS |
GAGAGGATATACTGACAGGA+TGG | 0.629895 | 3_3:+63062713 | Msa0463590:exon |
TAGCAATGATCTTGTAACCC+AGG | 0.630916 | 3_3:+63062881 | Msa0463590:CDS |
GGATGCTCAACCATGTGAAG+GGG | 0.631155 | 3_3:-63064388 | None:intergenic |
TGGCAATGTGCCGTTTAAGG+TGG | 0.632744 | 3_3:-63064165 | None:intergenic |
CGATGAAGCCGTCATGCACG+AGG | 0.633504 | 3_3:+63063556 | Msa0463590:CDS |
GGATTCTTCACAGAGAGTAG+AGG | 0.636348 | 3_3:-63064802 | None:intergenic |
GTAGAACCTACCAACATACT+GGG | 0.638697 | 3_3:-63066005 | None:intergenic |
TGGTGGTGATGCAAATGTGT+TGG | 0.638747 | 3_3:+63062908 | Msa0463590:CDS |
TAATGAGACCGTATTGCATG+AGG | 0.638850 | 3_3:+63063523 | Msa0463590:CDS |
GATTTCTGCCTCGTGCATGA+CGG | 0.639324 | 3_3:-63063564 | None:intergenic |
AGACACAGCCAAGTAAGAGG+AGG | 0.639336 | 3_3:+63064014 | Msa0463590:CDS |
GATGCTGGGTGGTGCCTCAG+TGG | 0.640560 | 3_3:-63063039 | None:intergenic |
CTTACTTGGCTGTGTCTCTG+GGG | 0.642263 | 3_3:-63064008 | None:intergenic |
TGAGTTAGCCAATTCTACAA+TGG | 0.644535 | 3_3:+63063625 | Msa0463590:CDS |
TTAAACGGCACATTGCCAAG+GGG | 0.646090 | 3_3:+63064170 | Msa0463590:CDS |
ATAAGGGCAATATCAAGCTG+TGG | 0.646903 | 3_3:-63061880 | None:intergenic |
TTACTGGGACTGCTCTCGTG+GGG | 0.650251 | 3_3:+63066350 | Msa0463590:three_prime_UTR |
GGGGCTTCAAGTATGTGCAA+AGG | 0.651165 | 3_3:-63065173 | None:intergenic |
GGCAGAAATCTGCAATGATG+GGG | 0.652193 | 3_3:+63063577 | Msa0463590:CDS |
AAATCAGCACAACAATGAGA+GGG | 0.653205 | 3_3:+63063247 | Msa0463590:CDS |
CTGAATCTGGAAACGCGGAA+CGG | 0.654262 | 3_3:-63060164 | None:intergenic |
GATGCTCAACCATGTGAAGG+GGG | 0.658296 | 3_3:-63064387 | None:intergenic |
TCTGAGGCATTGCCAAACAA+AGG | 0.658767 | 3_3:+63063074 | Msa0463590:CDS |
AGCACAGCCCATCAGTGAGG+TGG | 0.661112 | 3_3:+63063382 | Msa0463590:CDS |
CTTGTAACCCAGGCTACTGG+TGG | 0.663239 | 3_3:+63062891 | Msa0463590:CDS |
AATGATGTCTCATTATGACC+TGG | 0.663857 | 3_3:+63063856 | Msa0463590:CDS |
ACAAGCTTCATCTTGAAACG+AGG | 0.665126 | 3_3:-63065405 | None:intergenic |
GAATCAGCGTAAATTTGAGG+TGG | 0.665261 | 3_3:+63066216 | Msa0463590:three_prime_UTR |
TCTGCAACCCCAGTTCAACA+TGG | 0.665327 | 3_3:+63064435 | Msa0463590:CDS |
ACTTCTGATCCTGATTACAA+AGG | 0.667473 | 3_3:+63065114 | Msa0463590:CDS |
TGAACCACATTGTGATGATG+AGG | 0.667703 | 3_3:+63063346 | Msa0463590:CDS |
GGGCCATCTTGGAAAGTGTG+GGG | 0.669815 | 3_3:-63065770 | None:intergenic |
ACAGATAATAGTCTCATCAG+TGG | 0.670892 | 3_3:-63063291 | None:intergenic |
TAAACGGCACATTGCCAAGG+GGG | 0.671843 | 3_3:+63064171 | Msa0463590:CDS |
GATTTGTTGAGCTCAGCACA+AGG | 0.675538 | 3_3:+63064892 | Msa0463590:CDS |
TGAATCTGAATCTGGAAACG+CGG | 0.676868 | 3_3:-63060169 | None:intergenic |
AATTATGTAAGGTGTGCTGG+CGG | 0.677199 | 3_3:-63064308 | None:intergenic |
AGCACAGCACAACAATGAAG+GGG | 0.678121 | 3_3:+63063178 | Msa0463590:CDS |
AATCTGGAAACGCGGAACGG+CGG | 0.678556 | 3_3:-63060161 | None:intergenic |
TTTCCAGTCTGGAATAGATG+GGG | 0.680285 | 3_3:-63065139 | None:intergenic |
AGCACAACACACAAATGAGG+AGG | 0.684759 | 3_3:+63063214 | Msa0463590:CDS |
GGCACCACCCAGCATCCATG+TGG | 0.684942 | 3_3:+63063046 | Msa0463590:CDS |
CAGTCATCTGGACAATCATG+AGG | 0.685159 | 3_3:+63063769 | Msa0463590:CDS |
TGACAACAAAGTTCCTCCAG+AGG | 0.688757 | 3_3:-63065595 | None:intergenic |
AAGGTCACCATGTTGAACTG+GGG | 0.690139 | 3_3:-63064442 | None:intergenic |
TGAAGCACAGCACAACAATG+AGG | 0.693045 | 3_3:+63063313 | Msa0463590:CDS |
ATAGCCTACAGATTGACTTG+AGG | 0.693367 | 3_3:-63064575 | None:intergenic |
TGAAACACAGCACAGCAATG+AGG | 0.694362 | 3_3:+63063142 | Msa0463590:CDS |
ACCACATTGTGATGATGAGG+TGG | 0.696189 | 3_3:+63063349 | Msa0463590:CDS |
AGCACAGCACAACAATGAGG+AGG | 0.697162 | 3_3:+63063316 | Msa0463590:CDS |
AAGATGGAAGGATCCTCTGG+AGG | 0.706666 | 3_3:+63065582 | Msa0463590:CDS |
TATTGAGACTGTCATGTACG+AGG | 0.715965 | 3_3:+63063490 | Msa0463590:CDS |
TGACTCACAGCAGAACAATG+TGG | 0.718584 | 3_3:+63063412 | Msa0463590:CDS |
TGAAGCACAGCCCATCAGTG+AGG | 0.722715 | 3_3:+63063379 | Msa0463590:CDS |
AATGCAGACAAGTAATGATG+TGG | 0.730823 | 3_3:+63063112 | Msa0463590:CDS |
TGATTCGCAGCCGAGCAGTG+AGG | 0.731515 | 3_3:+63063442 | Msa0463590:CDS |
CTTGCGTCCAGAGACAGTGG+AGG | 0.735351 | 3_3:+63065881 | Msa0463590:CDS |
ACCACCTCATCATCACAATG+TGG | 0.740305 | 3_3:-63063350 | None:intergenic |
TCGACCACATGGATGCTGGG+TGG | 0.771726 | 3_3:-63063050 | None:intergenic |
TCTTGACAAGTCTACCACTG+AGG | 0.786307 | 3_3:+63063025 | Msa0463590:CDS |
GAAGACTTCAGAATCACACG+AGG | 0.794926 | 3_3:+63064951 | Msa0463590:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAATAAATTAATAA+TGG | - | chr3_3:63062676-63062695 | None:intergenic | 0.0% |
!!! | AATTTATTTTTTTTTTTTTT+TGG | + | chr3_3:63062681-63062700 | Msa0463590:intron | 0.0% |
!!! | ATTTATTTTTTTTTTTTTTT+GGG | + | chr3_3:63062682-63062701 | Msa0463590:intron | 0.0% |
!! | AATATATTATGTATATATGT+TGG | - | chr3_3:63060986-63061005 | None:intergenic | 10.0% |
!!! | TTATTCTTTTCATTATTTTA+TGG | + | chr3_3:63061121-63061140 | Msa0463590:intron | 10.0% |
!!! | TATTCTTTTCATTATTTTAT+GGG | + | chr3_3:63061122-63061141 | Msa0463590:intron | 10.0% |
!!! | GTTAAATATAACTTATTTTA+TGG | + | chr3_3:63061798-63061817 | Msa0463590:intron | 10.0% |
!! | AGAATATTATTATCAGAAAA+TGG | - | chr3_3:63060666-63060685 | None:intergenic | 15.0% |
!! | AACAATAATTATCTATTGTT+TGG | - | chr3_3:63061042-63061061 | None:intergenic | 15.0% |
!! | AATAATGAAAAGAATAAACA+AGG | - | chr3_3:63061118-63061137 | None:intergenic | 15.0% |
!!! | ATTCTTTTCATTATTTTATG+GGG | + | chr3_3:63061123-63061142 | Msa0463590:intron | 15.0% |
!! | ACATGAATATATTAGTAATT+TGG | + | chr3_3:63061316-63061335 | Msa0463590:intron | 15.0% |
!! | ATATATTAGTAATTTGGTAT+AGG | + | chr3_3:63061322-63061341 | Msa0463590:intron | 15.0% |
!!! | ATACTATAAATAACGAATTT+TGG | + | chr3_3:63062343-63062362 | Msa0463590:intron | 15.0% |
!!! | TACTATAAATAACGAATTTT+GGG | + | chr3_3:63062344-63062363 | Msa0463590:intron | 15.0% |
!! | ATATAATCTGTTACATTACA+TGG | + | chr3_3:63060471-63060490 | Msa0463590:intron | 20.0% |
!!! | CTTATTTGCTTTTTTGATTT+TGG | + | chr3_3:63060694-63060713 | Msa0463590:intron | 20.0% |
!!! | GATTGGATTTATTTTCTTAA+TGG | + | chr3_3:63060749-63060768 | Msa0463590:intron | 20.0% |
!! | ATGGATGAAAATATTGAATT+TGG | + | chr3_3:63060768-63060787 | Msa0463590:intron | 20.0% |
!!! | TGCAATATTATCTTTTGATT+TGG | + | chr3_3:63060813-63060832 | Msa0463590:intron | 20.0% |
!!! | AAACTATCCACTAATATTTT+TGG | - | chr3_3:63060914-63060933 | None:intergenic | 20.0% |
!! | AGTATTGTTAGTCAAATTTA+GGG | - | chr3_3:63061192-63061211 | None:intergenic | 20.0% |
!! | TAGTATTGTTAGTCAAATTT+AGG | - | chr3_3:63061193-63061212 | None:intergenic | 20.0% |
!! | TCAAAATAAAACATGAACAA+TGG | - | chr3_3:63061218-63061237 | None:intergenic | 20.0% |
!! | TACAAATCAATTATAACAGA+GGG | + | chr3_3:63061272-63061291 | Msa0463590:intron | 20.0% |
!! | ATATATTCATGTTCATATTG+AGG | - | chr3_3:63061308-63061327 | None:intergenic | 20.0% |
!! | TAGTTATTAGTATTACTTCA+TGG | - | chr3_3:63061489-63061508 | None:intergenic | 20.0% |
!! | AACATGTACTTTAGATTATA+TGG | - | chr3_3:63061622-63061641 | None:intergenic | 20.0% |
!!! | TTATTTTATATTGCATGTGT+GGG | + | chr3_3:63062030-63062049 | Msa0463590:intron | 20.0% |
!! | TTAGTGTTTATAGAATTGTT+TGG | + | chr3_3:63062216-63062235 | Msa0463590:intron | 20.0% |
!! | ATTGTCAAAGAAAAATAACA+AGG | - | chr3_3:63062400-63062419 | None:intergenic | 20.0% |
!! | TCATTATTTATTTCCAAATG+TGG | + | chr3_3:63062552-63062571 | Msa0463590:intron | 20.0% |
!! | AATTAAACATATACCACATT+TGG | - | chr3_3:63062568-63062587 | None:intergenic | 20.0% |
!! | CACATGAAAAAAAAAAATAC+AGG | - | chr3_3:63062609-63062628 | None:intergenic | 20.0% |
!!! | GTATTTTTTTTTTTCATGTG+AGG | + | chr3_3:63062609-63062628 | Msa0463590:intron | 20.0% |
!! | ATTATCAAGAATTTCTTGAT+GGG | - | chr3_3:63063669-63063688 | None:intergenic | 20.0% |
!! | TCTTGATCAAAAATTATGTA+AGG | - | chr3_3:63064322-63064341 | None:intergenic | 20.0% |
!!! | ACTCATCAAAATATTTTGAA+AGG | - | chr3_3:63064519-63064538 | None:intergenic | 20.0% |
!!! | TTTTTATTTGGTGATTTTAC+TGG | + | chr3_3:63066334-63066353 | Msa0463590:three_prime_UTR | 20.0% |
!!! | TTTTATTTGGTGATTTTACT+GGG | + | chr3_3:63066335-63066354 | Msa0463590:three_prime_UTR | 20.0% |
! | TTGGTTCAATTAGATCTTAT+CGG | + | chr3_3:63060037-63060056 | Msa0463590:five_prime_UTR | 25.0% |
!! | ACTTGATCTATTTTACTGTT+GGG | + | chr3_3:63060502-63060521 | Msa0463590:intron | 25.0% |
!! | TTTTTCGTTCTTATTCAACT+GGG | + | chr3_3:63060525-63060544 | Msa0463590:intron | 25.0% |
! | TAAATCCAATCAAAACAAGA+TGG | - | chr3_3:63060740-63060759 | None:intergenic | 25.0% |
! | ATATGTGCATTATCAACTAT+TGG | - | chr3_3:63060846-63060865 | None:intergenic | 25.0% |
! | GTTTGATCCAAAAATATTAG+TGG | + | chr3_3:63060904-63060923 | Msa0463590:intron | 25.0% |
!!! | ATAGTGTGAGCTTTTAATTT+AGG | - | chr3_3:63061014-63061033 | None:intergenic | 25.0% |
! | AATATTGTGAGAGACAAAAT+TGG | - | chr3_3:63061249-63061268 | None:intergenic | 25.0% |
! | GTACAAATCAATTATAACAG+AGG | + | chr3_3:63061271-63061290 | Msa0463590:intron | 25.0% |
!!! | AAAAAAGTTGATGTACAACT+TGG | - | chr3_3:63061378-63061397 | None:intergenic | 25.0% |
! | AAATTTGTGCAATTGAAATG+TGG | - | chr3_3:63061519-63061538 | None:intergenic | 25.0% |
!!! | TTTATAATGGTTGATGAAGA+TGG | + | chr3_3:63061575-63061594 | Msa0463590:intron | 25.0% |
!!! | AAGTCAAATTTGCTTAGTTT+TGG | + | chr3_3:63061776-63061795 | Msa0463590:intron | 25.0% |
! | TTTGTAGAACTTGGAAATAA+GGG | - | chr3_3:63061899-63061918 | None:intergenic | 25.0% |
! | CAATATAAAATAACCCTTGA+GGG | - | chr3_3:63062023-63062042 | None:intergenic | 25.0% |
!!! | GTTATTTTATATTGCATGTG+TGG | + | chr3_3:63062029-63062048 | Msa0463590:intron | 25.0% |
! | TGCACTATAGTAAATCTTAA+GGG | + | chr3_3:63062283-63062302 | Msa0463590:intron | 25.0% |
! | GAATTTATTTGTTTGTGCTT+TGG | + | chr3_3:63062512-63062531 | Msa0463590:intron | 25.0% |
! | TTTACAGTTACAATTAAGTG+AGG | - | chr3_3:63062650-63062669 | None:intergenic | 25.0% |
! | GATTATCAAGAATTTCTTGA+TGG | - | chr3_3:63063670-63063689 | None:intergenic | 25.0% |
! | GAAAAAAAAGTCTATAGTCT+GGG | + | chr3_3:63064036-63064055 | Msa0463590:CDS | 25.0% |
!!! | AAATATTTTGATGAGTTACC+AGG | + | chr3_3:63064523-63064542 | Msa0463590:CDS | 25.0% |
! | TTGATATGTTGTATTCCATT+TGG | - | chr3_3:63065046-63065065 | None:intergenic | 25.0% |
! | GAATACAACATATCAAATGT+TGG | + | chr3_3:63065050-63065069 | Msa0463590:CDS | 25.0% |
! | TTACATTCTTTCATGAAGTT+TGG | + | chr3_3:63065244-63065263 | Msa0463590:CDS | 25.0% |
! | TGAAGTTTGGAAATTACATT+TGG | + | chr3_3:63065257-63065276 | Msa0463590:CDS | 25.0% |
! | TTCAGTTTCACAAAAATCTA+CGG | + | chr3_3:63065432-63065451 | Msa0463590:CDS | 25.0% |
! | GTAACATAAGAGTGATTATT+TGG | + | chr3_3:63066065-63066084 | Msa0463590:three_prime_UTR | 25.0% |
!!! | TTGCCATTGGTTTTTTTATT+TGG | + | chr3_3:63066322-63066341 | Msa0463590:three_prime_UTR | 25.0% |
! | TCACCAAATAAAAAAACCAA+TGG | - | chr3_3:63066328-63066347 | None:intergenic | 25.0% |
TGGTTCAATTAGATCTTATC+GGG | + | chr3_3:63060038-63060057 | Msa0463590:five_prime_UTR | 30.0% | |
! | AGATTCAGTTGACTTATATC+TGG | + | chr3_3:63060185-63060204 | Msa0463590:five_prime_UTR | 30.0% |
! | TTTAACTTTCACGTTTGTGT+TGG | + | chr3_3:63060303-63060322 | Msa0463590:intron | 30.0% |
! | GACTTGATCTATTTTACTGT+TGG | + | chr3_3:63060501-63060520 | Msa0463590:intron | 30.0% |
! | GTTTTTCGTTCTTATTCAAC+TGG | + | chr3_3:63060524-63060543 | Msa0463590:intron | 30.0% |
TGTTTACGATATAGTTGTAC+CGG | + | chr3_3:63060594-63060613 | Msa0463590:intron | 30.0% | |
ACTACATTCTAATCCATTTC+CGG | - | chr3_3:63060616-63060635 | None:intergenic | 30.0% | |
GATTAGAATGTAGTGTGTTT+AGG | + | chr3_3:63060622-63060641 | Msa0463590:intron | 30.0% | |
!!! | TGATACCATCTTGTTTTGAT+TGG | + | chr3_3:63060732-63060751 | Msa0463590:intron | 30.0% |
! | TAGTCAAATTTAGGGTTCAA+CGG | - | chr3_3:63061184-63061203 | None:intergenic | 30.0% |
ATTAGTAATTTGGTATAGGC+TGG | + | chr3_3:63061326-63061345 | Msa0463590:intron | 30.0% | |
TTAGTAATTTGGTATAGGCT+GGG | + | chr3_3:63061327-63061346 | Msa0463590:intron | 30.0% | |
GATATAGTCAGTGAGTAAAT+GGG | + | chr3_3:63061349-63061368 | Msa0463590:intron | 30.0% | |
CAATAGATAATTAACCTGTC+CGG | + | chr3_3:63061463-63061482 | Msa0463590:intron | 30.0% | |
TATTAGTATTACTTCATGGC+CGG | - | chr3_3:63061485-63061504 | None:intergenic | 30.0% | |
! | TCTGTTCAGCTGATTTATAA+TGG | + | chr3_3:63061562-63061581 | Msa0463590:intron | 30.0% |
ACTATCAGCAAATACAAACA+CGG | - | chr3_3:63061674-63061693 | None:intergenic | 30.0% | |
! | TGTATTTGCTGATAGTTTGT+TGG | + | chr3_3:63061678-63061697 | Msa0463590:intron | 30.0% |
CTAACAATGATAGTAAGACA+CGG | - | chr3_3:63061735-63061754 | None:intergenic | 30.0% | |
! | TATTTTATGGCAATTGTTGC+AGG | + | chr3_3:63061811-63061830 | Msa0463590:intron | 30.0% |
CTTTGTAGAACTTGGAAATA+AGG | - | chr3_3:63061900-63061919 | None:intergenic | 30.0% | |
!!! | CTTTTTAGCTTTGTAGAACT+TGG | - | chr3_3:63061908-63061927 | None:intergenic | 30.0% |
CAAGTTCTACAAAGCTAAAA+AGG | + | chr3_3:63061906-63061925 | Msa0463590:five_prime_UTR | 30.0% | |
TCTACAAAGCTAAAAAGGTA+AGG | + | chr3_3:63061911-63061930 | Msa0463590:intron | 30.0% | |
CTACAAAGCTAAAAAGGTAA+GGG | + | chr3_3:63061912-63061931 | Msa0463590:intron | 30.0% | |
GCAATATAAAATAACCCTTG+AGG | - | chr3_3:63062024-63062043 | None:intergenic | 30.0% | |
TGTGATCATGTGCATATTTA+AGG | + | chr3_3:63062104-63062123 | Msa0463590:intron | 30.0% | |
!! | AAAGTTGATGCATTGCATTT+GGG | + | chr3_3:63062127-63062146 | Msa0463590:intron | 30.0% |
AAGATTTACTATAGTGCAGT+AGG | - | chr3_3:63062281-63062300 | None:intergenic | 30.0% | |
CTGCACTATAGTAAATCTTA+AGG | + | chr3_3:63062282-63062301 | Msa0463590:intron | 30.0% | |
AGTAAACCAAAATATACACG+TGG | + | chr3_3:63062320-63062339 | Msa0463590:intron | 30.0% | |
! | TAGTATCCACGTGTATATTT+TGG | - | chr3_3:63062329-63062348 | None:intergenic | 30.0% |
ATGAATAAACCATGCACATA+TGG | - | chr3_3:63062442-63062461 | None:intergenic | 30.0% | |
!!! | TTTTTTTTTTTGGGTCAAGC+AGG | + | chr3_3:63062691-63062710 | Msa0463590:intron | 30.0% |
!!! | TAGCTCTTGTTTTACATCAT+GGG | - | chr3_3:63062841-63062860 | None:intergenic | 30.0% |
!!! | TTAGCTCTTGTTTTACATCA+TGG | - | chr3_3:63062842-63062861 | None:intergenic | 30.0% |
GATGTAAAACAAGAGCTAAA+TGG | + | chr3_3:63062843-63062862 | Msa0463590:CDS | 30.0% | |
!! | CTCATTTTTCTGACATTCTT+TGG | - | chr3_3:63062940-63062959 | None:intergenic | 30.0% |
TACATGACAGTCTCAATATT+GGG | - | chr3_3:63063488-63063507 | None:intergenic | 30.0% | |
GTCATAATGAGACATCATTT+GGG | - | chr3_3:63063855-63063874 | None:intergenic | 30.0% | |
GCATTTACTATTTCATAGCT+GGG | - | chr3_3:63063959-63063978 | None:intergenic | 30.0% | |
AGCATTTACTATTTCATAGC+TGG | - | chr3_3:63063960-63063979 | None:intergenic | 30.0% | |
!!! | TTTTTTTTCCTCCTCTTACT+TGG | - | chr3_3:63064025-63064044 | None:intergenic | 30.0% |
GGAAAAAAAAGTCTATAGTC+TGG | + | chr3_3:63064035-63064054 | Msa0463590:CDS | 30.0% | |
AAAAATTATGTAAGGTGTGC+TGG | - | chr3_3:63064314-63064333 | None:intergenic | 30.0% | |
GTGACCTTTAATACTATTCA+AGG | + | chr3_3:63064457-63064476 | Msa0463590:CDS | 30.0% | |
GTCTCCTTGAATAGTATTAA+AGG | - | chr3_3:63064464-63064483 | None:intergenic | 30.0% | |
TGTAGGCTATGTATTTATCA+CGG | + | chr3_3:63064588-63064607 | Msa0463590:CDS | 30.0% | |
ATTTCTGATTGGAATTTGGA+GGG | + | chr3_3:63064718-63064737 | Msa0463590:CDS | 30.0% | |
AAGAATCCACTTATCTTCAA+TGG | + | chr3_3:63064817-63064836 | Msa0463590:CDS | 30.0% | |
ATGCAACATTGCTTAAAGTA+CGG | - | chr3_3:63064870-63064889 | None:intergenic | 30.0% | |
!! | AAGGCATTGTCAATAAAATC+CGG | + | chr3_3:63064911-63064930 | Msa0463590:CDS | 30.0% |
! | ATAAAAAGGCTCTTTTCACT+GGG | - | chr3_3:63065012-63065031 | None:intergenic | 30.0% |
! | AATAAAAAGGCTCTTTTCAC+TGG | - | chr3_3:63065013-63065032 | None:intergenic | 30.0% |
!! | TGGTTTGGTCATCAATAAAA+AGG | - | chr3_3:63065026-63065045 | None:intergenic | 30.0% |
! | TTATTGATGACCAAACCAAA+TGG | + | chr3_3:63065028-63065047 | Msa0463590:CDS | 30.0% |
ATGTTGTATTCCATTTGGTT+TGG | - | chr3_3:63065041-63065060 | None:intergenic | 30.0% | |
! | AATGTTTGCTGCATCATAAA+GGG | - | chr3_3:63065196-63065215 | None:intergenic | 30.0% |
TGAAAGAATGTAATAGCAGT+GGG | - | chr3_3:63065237-63065256 | None:intergenic | 30.0% | |
ATGAAAGAATGTAATAGCAG+TGG | - | chr3_3:63065238-63065257 | None:intergenic | 30.0% | |
! | TTATCGATCTTTTCGTACAT+GGG | - | chr3_3:63065336-63065355 | None:intergenic | 30.0% |
! | TTTGTCAAGATTGTTGATGA+CGG | + | chr3_3:63065471-63065490 | Msa0463590:CDS | 30.0% |
TTATCAAAGATAGAGTCAGA+AGG | - | chr3_3:63065828-63065847 | None:intergenic | 30.0% | |
TGATAAAAAGAGCAAAGAGA+TGG | + | chr3_3:63065842-63065861 | Msa0463590:CDS | 30.0% | |
ATCAAGGACTACTTGTATTA+GGG | - | chr3_3:63066167-63066186 | None:intergenic | 30.0% | |
AAGTCAACTGAATCTGAATC+TGG | - | chr3_3:63060180-63060199 | None:intergenic | 35.0% | |
! | ATTATGTCATTTGCGAACTC+TGG | + | chr3_3:63060435-63060454 | Msa0463590:intron | 35.0% |
! | TTATGTCATTTGCGAACTCT+GGG | + | chr3_3:63060436-63060455 | Msa0463590:intron | 35.0% |
TGTTACATTACATGGAGTCA+TGG | + | chr3_3:63060479-63060498 | Msa0463590:intron | 35.0% | |
! | AGTGGATAGTTTCTCTTTTC+TGG | + | chr3_3:63060922-63060941 | Msa0463590:intron | 35.0% |
TATAATGAGCTTGATCACCA+AGG | + | chr3_3:63060945-63060964 | Msa0463590:intron | 35.0% | |
CTGTATGCATAGATTCAGAA+TGG | + | chr3_3:63061065-63061084 | Msa0463590:intron | 35.0% | |
GGATATAGTCAGTGAGTAAA+TGG | + | chr3_3:63061348-63061367 | Msa0463590:intron | 35.0% | |
ATGTAGAACAAGTGCAAACA+AGG | - | chr3_3:63061442-63061461 | None:intergenic | 35.0% | |
! | GCAAATACAAACACGGATTA+TGG | - | chr3_3:63061667-63061686 | None:intergenic | 35.0% |
! | TGATAGTAAGACACGGATTA+TGG | - | chr3_3:63061728-63061747 | None:intergenic | 35.0% |
!! | ATTCTGCTATGGTTGTTTTC+TGG | + | chr3_3:63061951-63061970 | Msa0463590:intron | 35.0% |
!! | TTCTGCTATGGTTGTTTTCT+GGG | + | chr3_3:63061952-63061971 | Msa0463590:intron | 35.0% |
!! | GAAAGTTGATGCATTGCATT+TGG | + | chr3_3:63062126-63062145 | Msa0463590:intron | 35.0% |
! | TCGTCTCATCTTTTACATCA+GGG | - | chr3_3:63062770-63062789 | None:intergenic | 35.0% |
! | ATCGTCTCATCTTTTACATC+AGG | - | chr3_3:63062771-63062790 | None:intergenic | 35.0% |
AATGCAGACAAGTAATGATG+TGG | + | chr3_3:63063112-63063131 | Msa0463590:CDS | 35.0% | |
AAAATCAGCACAACAATGAG+AGG | + | chr3_3:63063246-63063265 | Msa0463590:CDS | 35.0% | |
AAATCAGCACAACAATGAGA+GGG | + | chr3_3:63063247-63063266 | Msa0463590:CDS | 35.0% | |
CAGATAATAGTCTCATCAGT+GGG | - | chr3_3:63063293-63063312 | None:intergenic | 35.0% | |
ACAGATAATAGTCTCATCAG+TGG | - | chr3_3:63063294-63063313 | None:intergenic | 35.0% | |
GTACATGACAGTCTCAATAT+TGG | - | chr3_3:63063489-63063508 | None:intergenic | 35.0% | |
TGAGTTAGCCAATTCTACAA+TGG | + | chr3_3:63063625-63063644 | Msa0463590:CDS | 35.0% | |
ATACTCTTGCAAGTGATTGT+GGG | - | chr3_3:63063735-63063754 | None:intergenic | 35.0% | |
ATGAGACATCATTTGGGAAT+TGG | - | chr3_3:63063849-63063868 | None:intergenic | 35.0% | |
GGTCATAATGAGACATCATT+TGG | - | chr3_3:63063856-63063875 | None:intergenic | 35.0% | |
AATGATGTCTCATTATGACC+TGG | + | chr3_3:63063856-63063875 | Msa0463590:CDS | 35.0% | |
! | GAAGTGTTTCATTATTTGCC+AGG | - | chr3_3:63063877-63063896 | None:intergenic | 35.0% |
! | AACTTTTGAACCAGTACTGT+AGG | - | chr3_3:63064134-63064153 | None:intergenic | 35.0% |
GTAGGCTATGTATTTATCAC+GGG | + | chr3_3:63064589-63064608 | Msa0463590:CDS | 35.0% | |
!!! | GACATTTTGTTGATAGTGAC+TGG | + | chr3_3:63064611-63064630 | Msa0463590:CDS | 35.0% |
GAGAATTCTCAATGTTGTGA+TGG | + | chr3_3:63064645-63064664 | Msa0463590:CDS | 35.0% | |
CAAATTCCAATCAGAAATGC+AGG | - | chr3_3:63064716-63064735 | None:intergenic | 35.0% | |
CTGCATTTCTGATTGGAATT+TGG | + | chr3_3:63064714-63064733 | Msa0463590:CDS | 35.0% | |
CATTTCTGATTGGAATTTGG+AGG | + | chr3_3:63064717-63064736 | Msa0463590:CDS | 35.0% | |
AACTGACCATTGAAGATAAG+TGG | - | chr3_3:63064826-63064845 | None:intergenic | 35.0% | |
TTCAATGGTCAGTTGCTAAT+TGG | + | chr3_3:63064832-63064851 | Msa0463590:CDS | 35.0% | |
TGCAACATTGCTTAAAGTAC+GGG | - | chr3_3:63064869-63064888 | None:intergenic | 35.0% | |
! | AGGCATTGTCAATAAAATCC+GGG | + | chr3_3:63064912-63064931 | Msa0463590:CDS | 35.0% |
TCACATATTTCACACTTTCC+CGG | - | chr3_3:63064933-63064952 | None:intergenic | 35.0% | |
GGATAAATTCCTGGATCTTA+AGG | + | chr3_3:63064972-63064991 | Msa0463590:CDS | 35.0% | |
ACTTCTGATCCTGATTACAA+AGG | + | chr3_3:63065114-63065133 | Msa0463590:CDS | 35.0% | |
! | ATGTTTGCTGCATCATAAAG+GGG | - | chr3_3:63065195-63065214 | None:intergenic | 35.0% |
! | GAATGTTTGCTGCATCATAA+AGG | - | chr3_3:63065197-63065216 | None:intergenic | 35.0% |
TTAGTAAGGTCGCTAATGAA+GGG | - | chr3_3:63065312-63065331 | None:intergenic | 35.0% | |
TTTAGTAAGGTCGCTAATGA+AGG | - | chr3_3:63065313-63065332 | None:intergenic | 35.0% | |
TTTCGTACATGGGTTTAGTA+AGG | - | chr3_3:63065326-63065345 | None:intergenic | 35.0% | |
! | CTTATCGATCTTTTCGTACA+TGG | - | chr3_3:63065337-63065356 | None:intergenic | 35.0% |
ACGAAAAGATCGATAAGTAC+TGG | + | chr3_3:63065340-63065359 | Msa0463590:CDS | 35.0% | |
! | TTTGGTGATTGCTGTAGTTA+TGG | + | chr3_3:63065380-63065399 | Msa0463590:CDS | 35.0% |
! | GGAACTTTGTTGTCAGATAA+TGG | + | chr3_3:63065603-63065622 | Msa0463590:CDS | 35.0% |
CAATTCAGACTTTGTCTGAT+GGG | - | chr3_3:63065667-63065686 | None:intergenic | 35.0% | |
GTTCCAGACTTTGATGTATT+AGG | + | chr3_3:63065720-63065739 | Msa0463590:CDS | 35.0% | |
CAACCTAATACATCAAAGTC+TGG | - | chr3_3:63065726-63065745 | None:intergenic | 35.0% | |
CAGACTTTGATGTATTAGGT+TGG | + | chr3_3:63065724-63065743 | Msa0463590:CDS | 35.0% | |
!! | ACTTTGATGTATTAGGTTGG+TGG | + | chr3_3:63065727-63065746 | Msa0463590:CDS | 35.0% |
TGGAATAGCCAATATATCTC+GGG | - | chr3_3:63065793-63065812 | None:intergenic | 35.0% | |
CTGGAATAGCCAATATATCT+CGG | - | chr3_3:63065794-63065813 | None:intergenic | 35.0% | |
AAAGATAGAGTCAGAAGGAA+CGG | - | chr3_3:63065823-63065842 | None:intergenic | 35.0% | |
TACTTGTATTAGGGAAAGGT+AGG | - | chr3_3:63066158-63066177 | None:intergenic | 35.0% | |
CATCAAGGACTACTTGTATT+AGG | - | chr3_3:63066168-63066187 | None:intergenic | 35.0% | |
!! | TCAATCTGATTTGTTCCATC+AGG | + | chr3_3:63066194-63066213 | Msa0463590:three_prime_UTR | 35.0% |
!! | AAATTTACGCTGATTCCTGA+TGG | - | chr3_3:63066212-63066231 | None:intergenic | 35.0% |
TAGGGAAAACTATGTGTCTT+TGG | + | chr3_3:63066385-63066404 | Msa0463590:three_prime_UTR | 35.0% | |
TGAACCAAATTTGAGAGACG+CGG | - | chr3_3:63060025-63060044 | None:intergenic | 40.0% | |
TGAATCTGAATCTGGAAACG+CGG | - | chr3_3:63060172-63060191 | None:intergenic | 40.0% | |
GAAACTAGTAAGAACGATCG+CGG | + | chr3_3:63060350-63060369 | Msa0463590:intron | 40.0% | |
AAACTAGTAAGAACGATCGC+GGG | + | chr3_3:63060351-63060370 | Msa0463590:intron | 40.0% | |
! | TCATTGCAGCAACGTTTTGT+CGG | - | chr3_3:63060556-63060575 | None:intergenic | 40.0% |
CGATATAGTTGTACCGGAAA+TGG | + | chr3_3:63060600-63060619 | Msa0463590:intron | 40.0% | |
GTCTCAATAGTCAATGAGCA+AGG | - | chr3_3:63061154-63061173 | None:intergenic | 40.0% | |
GTTAACTTCTGTGCTTTCCA+AGG | + | chr3_3:63061853-63061872 | Msa0463590:five_prime_UTR | 40.0% | |
TATCAAGCTGTGGAAAACCT+TGG | - | chr3_3:63061873-63061892 | None:intergenic | 40.0% | |
ATAAGGGCAATATCAAGCTG+TGG | - | chr3_3:63061883-63061902 | None:intergenic | 40.0% | |
AGCTACTTCACCTTCTTCAA+GGG | - | chr3_3:63062742-63062761 | None:intergenic | 40.0% | |
TAGCTACTTCACCTTCTTCA+AGG | - | chr3_3:63062743-63062762 | None:intergenic | 40.0% | |
! | CGTCTCATCTTTTACATCAG+GGG | - | chr3_3:63062769-63062788 | None:intergenic | 40.0% |
TGGGTTACAAGATCATTGCT+AGG | - | chr3_3:63062882-63062901 | None:intergenic | 40.0% | |
TAGCAATGATCTTGTAACCC+AGG | + | chr3_3:63062881-63062900 | Msa0463590:CDS | 40.0% | |
GGTAGTGATTCAGAAATCTC+TGG | - | chr3_3:63062963-63062982 | None:intergenic | 40.0% | |
TCACTACCCAAAAACCAAGT+CGG | + | chr3_3:63062975-63062994 | Msa0463590:CDS | 40.0% | |
GAACAAACCACACCTTTGTT+TGG | - | chr3_3:63063089-63063108 | None:intergenic | 40.0% | |
AAGCACAGCACAACAATGAA+GGG | + | chr3_3:63063177-63063196 | Msa0463590:CDS | 40.0% | |
TGAAGCACAACACACAAATG+AGG | + | chr3_3:63063211-63063230 | Msa0463590:CDS | 40.0% | |
! | TGAACCACATTGTGATGATG+AGG | + | chr3_3:63063346-63063365 | Msa0463590:CDS | 40.0% |
GAAAAAACTACCTCACTGCT+CGG | - | chr3_3:63063455-63063474 | None:intergenic | 40.0% | |
TATTGAGACTGTCATGTACG+AGG | + | chr3_3:63063490-63063509 | Msa0463590:CDS | 40.0% | |
TAATGAGACCGTATTGCATG+AGG | + | chr3_3:63063523-63063542 | Msa0463590:CDS | 40.0% | |
AATTTGCGCCTCATGCAATA+CGG | - | chr3_3:63063534-63063553 | None:intergenic | 40.0% | |
AGGCAGAAATCTGCAATGAT+GGG | + | chr3_3:63063576-63063595 | Msa0463590:CDS | 40.0% | |
GAATTGGCTAACTCATTCTC+AGG | - | chr3_3:63063620-63063639 | None:intergenic | 40.0% | |
GTTGGGATCCATTGTAGAAT+TGG | - | chr3_3:63063636-63063655 | None:intergenic | 40.0% | |
TGATGGGATAGCTGATTGTT+GGG | - | chr3_3:63063653-63063672 | None:intergenic | 40.0% | |
TTGATGGGATAGCTGATTGT+TGG | - | chr3_3:63063654-63063673 | None:intergenic | 40.0% | |
TACTCTTGCAAGTGATTGTG+GGG | - | chr3_3:63063734-63063753 | None:intergenic | 40.0% | |
CATACTCTTGCAAGTGATTG+TGG | - | chr3_3:63063736-63063755 | None:intergenic | 40.0% | |
TGATTGTCCAGATGACTGTT+CGG | - | chr3_3:63063767-63063786 | None:intergenic | 40.0% | |
TTTCAGAGTTAGGCAACTGA+TGG | - | chr3_3:63063805-63063824 | None:intergenic | 40.0% | |
AACACTTCACAACAATCAGC+TGG | + | chr3_3:63063889-63063908 | Msa0463590:CDS | 40.0% | |
! | CAAACTTTTGCCTACAGTAC+TGG | + | chr3_3:63064121-63064140 | Msa0463590:CDS | 40.0% |
!! | AGTACTGGTTCAAAAGTTGC+TGG | + | chr3_3:63064136-63064155 | Msa0463590:CDS | 40.0% |
AATTATGTAAGGTGTGCTGG+CGG | - | chr3_3:63064311-63064330 | None:intergenic | 40.0% | |
AAAGGTCACCATGTTGAACT+GGG | - | chr3_3:63064446-63064465 | None:intergenic | 40.0% | |
TAAAGGTCACCATGTTGAAC+TGG | - | chr3_3:63064447-63064466 | None:intergenic | 40.0% | |
!! | ATAGCCTACAGATTGACTTG+AGG | - | chr3_3:63064578-63064597 | None:intergenic | 40.0% |
TATCTGCCTGCATTTCTGAT+TGG | + | chr3_3:63064707-63064726 | Msa0463590:CDS | 40.0% | |
! | TAGAGGTCTAAGGTTCTCAA+GGG | - | chr3_3:63064788-63064807 | None:intergenic | 40.0% |
ATCACACGAGGATAAATTCC+TGG | + | chr3_3:63064963-63064982 | Msa0463590:CDS | 40.0% | |
!! | AGGATCAGAAGTGTCTAAAC+AGG | - | chr3_3:63065106-63065125 | None:intergenic | 40.0% |
! | TTTCCAGTCTGGAATAGATG+GGG | - | chr3_3:63065142-63065161 | None:intergenic | 40.0% |
! | GTTTCCAGTCTGGAATAGAT+GGG | - | chr3_3:63065143-63065162 | None:intergenic | 40.0% |
! | AGTTTCCAGTCTGGAATAGA+TGG | - | chr3_3:63065144-63065163 | None:intergenic | 40.0% |
ATCTCAACAAGTTTCCAGTC+TGG | - | chr3_3:63065153-63065172 | None:intergenic | 40.0% | |
ACAAGCTTCATCTTGAAACG+AGG | - | chr3_3:63065408-63065427 | None:intergenic | 40.0% | |
TTTCACAAAAATCTACGGCG+AGG | + | chr3_3:63065437-63065456 | Msa0463590:CDS | 40.0% | |
TTTCCTTCTTCTGCATATGC+CGG | - | chr3_3:63065546-63065565 | None:intergenic | 40.0% | |
TATGCAGAAGAAGGAAATGC+TGG | + | chr3_3:63065549-63065568 | Msa0463590:CDS | 40.0% | |
TGCTGGAAGCAATATGAAGA+TGG | + | chr3_3:63065566-63065585 | Msa0463590:CDS | 40.0% | |
GGAAGCAATATGAAGATGGA+AGG | + | chr3_3:63065570-63065589 | Msa0463590:CDS | 40.0% | |
AGACTTTGATGCCTACATCA+TGG | + | chr3_3:63065632-63065651 | Msa0463590:CDS | 40.0% | |
GGTAGAAGTTTCCATGATGT+AGG | - | chr3_3:63065646-63065665 | None:intergenic | 40.0% | |
CCAATTCAGACTTTGTCTGA+TGG | - | chr3_3:63065668-63065687 | None:intergenic | 40.0% | |
CCATCAGACAAAGTCTGAAT+TGG | + | chr3_3:63065665-63065684 | Msa0463590:CDS | 40.0% | |
GTCTGAATTGGATCAGTATC+TGG | + | chr3_3:63065677-63065696 | Msa0463590:CDS | 40.0% | |
TTCAACTGCGCTTGTGAAAA+TGG | + | chr3_3:63065950-63065969 | Msa0463590:CDS | 40.0% | |
TACACTTGTACCCAGTATGT+TGG | + | chr3_3:63065995-63066014 | Msa0463590:three_prime_UTR | 40.0% | |
GTAGAACCTACCAACATACT+GGG | - | chr3_3:63066008-63066027 | None:intergenic | 40.0% | |
AGTAGAACCTACCAACATAC+TGG | - | chr3_3:63066009-63066028 | None:intergenic | 40.0% | |
GGACTACTTGTATTAGGGAA+AGG | - | chr3_3:63066162-63066181 | None:intergenic | 40.0% | |
CAGGAATCAGCGTAAATTTG+AGG | + | chr3_3:63066213-63066232 | Msa0463590:three_prime_UTR | 40.0% | |
GAATCAGCGTAAATTTGAGG+TGG | + | chr3_3:63066216-63066235 | Msa0463590:three_prime_UTR | 40.0% | |
GAGAGAGAGAGAGAGAGATT+GGG | - | chr3_3:63060078-63060097 | None:intergenic | 45.0% | |
AGAGAGAGAGAGAGAGAGAT+TGG | - | chr3_3:63060079-63060098 | None:intergenic | 45.0% | |
GAGCTTGATCACCAAGGTAA+TGG | + | chr3_3:63060951-63060970 | Msa0463590:intron | 45.0% | |
!! | CACCAAGGTAATGGACAATG+AGG | + | chr3_3:63060960-63060979 | Msa0463590:intron | 45.0% |
TGGCAATTGTTGCAGGCATA+TGG | + | chr3_3:63061818-63061837 | Msa0463590:intron | 45.0% | |
AGGCATATGGCAGTAGAAGA+AGG | + | chr3_3:63061831-63061850 | Msa0463590:intron | 45.0% | |
TGTGAAGCATGTAACCCTCA+AGG | + | chr3_3:63062006-63062025 | Msa0463590:intron | 45.0% | |
GTGAAGCATGTAACCCTCAA+GGG | + | chr3_3:63062007-63062026 | Msa0463590:intron | 45.0% | |
TACCACTACTATCGTGTCTC+TGG | + | chr3_3:63062373-63062392 | Msa0463590:intron | 45.0% | |
ACCACTACTATCGTGTCTCT+GGG | + | chr3_3:63062374-63062393 | Msa0463590:intron | 45.0% | |
AGTTCAGTGCCATATGTGCA+TGG | + | chr3_3:63062430-63062449 | Msa0463590:intron | 45.0% | |
!!! | TTTTTTGGGTCAAGCAGGAG+AGG | + | chr3_3:63062696-63062715 | Msa0463590:intron | 45.0% |
GAGAGGATATACTGACAGGA+TGG | + | chr3_3:63062713-63062732 | Msa0463590:exon | 45.0% | |
GACGATCAATGTCGACAAGA+TGG | + | chr3_3:63062785-63062804 | Msa0463590:CDS | 45.0% | |
! | TGGTGGTGATGCAAATGTGT+TGG | + | chr3_3:63062908-63062927 | Msa0463590:CDS | 45.0% |
!!! | TGATCGCCGACTTGGTTTTT+GGG | - | chr3_3:63062984-63063003 | None:intergenic | 45.0% |
!!! | TTGATCGCCGACTTGGTTTT+TGG | - | chr3_3:63062985-63063004 | None:intergenic | 45.0% |
TCTTGACAAGTCTACCACTG+AGG | + | chr3_3:63063025-63063044 | Msa0463590:CDS | 45.0% | |
!! | TCTGAGGCATTGCCAAACAA+AGG | + | chr3_3:63063074-63063093 | Msa0463590:CDS | 45.0% |
TGAAACACAGCACAGCAATG+AGG | + | chr3_3:63063142-63063161 | Msa0463590:CDS | 45.0% | |
TCATTGTTGTGCTGTGCTTC+AGG | - | chr3_3:63063176-63063195 | None:intergenic | 45.0% | |
GAAGCACAGCACAACAATGA+AGG | + | chr3_3:63063176-63063195 | Msa0463590:CDS | 45.0% | |
AGCACAGCACAACAATGAAG+GGG | + | chr3_3:63063178-63063197 | Msa0463590:CDS | 45.0% | |
AGCACAACACACAAATGAGG+AGG | + | chr3_3:63063214-63063233 | Msa0463590:CDS | 45.0% | |
CACAAATGAGGAGGTTGCAT+CGG | + | chr3_3:63063223-63063242 | Msa0463590:CDS | 45.0% | |
TGAAGCACAGCACAACAATG+AGG | + | chr3_3:63063175-63063194 | Msa0463590:CDS | 45.0% | |
! | ACCACATTGTGATGATGAGG+TGG | + | chr3_3:63063349-63063368 | Msa0463590:CDS | 45.0% |
ACCACCTCATCATCACAATG+TGG | - | chr3_3:63063353-63063372 | None:intergenic | 45.0% | |
GACATTACCACCTCACTGAT+GGG | - | chr3_3:63063392-63063411 | None:intergenic | 45.0% | |
AGACATTACCACCTCACTGA+TGG | - | chr3_3:63063393-63063412 | None:intergenic | 45.0% | |
TGACTCACAGCAGAACAATG+TGG | + | chr3_3:63063412-63063431 | Msa0463590:CDS | 45.0% | |
GAGGCAGAAATCTGCAATGA+TGG | + | chr3_3:63063575-63063594 | Msa0463590:CDS | 45.0% | |
GGCAGAAATCTGCAATGATG+GGG | + | chr3_3:63063577-63063596 | Msa0463590:CDS | 45.0% | |
TGCAAGTGATTGTGGGGTAT+TGG | - | chr3_3:63063728-63063747 | None:intergenic | 45.0% | |
CAGTCATCTGGACAATCATG+AGG | + | chr3_3:63063769-63063788 | Msa0463590:CDS | 45.0% | |
GGGGTATGCTCTTCATTGTT+TGG | - | chr3_3:63063992-63064011 | None:intergenic | 45.0% | |
ACCATAGAAACAGTTAGCGC+TGG | + | chr3_3:63064067-63064086 | Msa0463590:CDS | 45.0% | |
!! | TCCAGCGCTAACTGTTTCTA+TGG | - | chr3_3:63064071-63064090 | None:intergenic | 45.0% |
! | AGTTAGCGCTGGATGTAGAA+GGG | + | chr3_3:63064078-63064097 | Msa0463590:CDS | 45.0% |
! | ATGTAGAAGGGCATGTTGCA+AGG | + | chr3_3:63064090-63064109 | Msa0463590:CDS | 45.0% |
CTTAAACGGCACATTGCCAA+GGG | + | chr3_3:63064169-63064188 | Msa0463590:CDS | 45.0% | |
TTAAACGGCACATTGCCAAG+GGG | + | chr3_3:63064170-63064189 | Msa0463590:CDS | 45.0% | |
! | GTATATGGGGCATGCTGATT+TGG | - | chr3_3:63064226-63064245 | None:intergenic | 45.0% |
GTTGTCGTCATGAGATTGCT+AGG | + | chr3_3:63064344-63064363 | Msa0463590:CDS | 45.0% | |
TGGATGCTCAACCATGTGAA+GGG | - | chr3_3:63064392-63064411 | None:intergenic | 45.0% | |
CGGACAAATGCAACAAATCC+TGG | - | chr3_3:63064412-63064431 | None:intergenic | 45.0% | |
TGAACTGGGGTTGCAGATTT+CGG | - | chr3_3:63064432-63064451 | None:intergenic | 45.0% | |
AAGGTCACCATGTTGAACTG+GGG | - | chr3_3:63064445-63064464 | None:intergenic | 45.0% | |
CTGTGTCGCAACTTACTTGA+CGG | + | chr3_3:63064483-63064502 | Msa0463590:CDS | 45.0% | |
! | GATGAGTTACCAGGACGTTT+TGG | + | chr3_3:63064532-63064551 | Msa0463590:CDS | 45.0% |
TTGGTCTGACACTGGATATG+TGG | + | chr3_3:63064551-63064570 | Msa0463590:CDS | 45.0% | |
TGGACCTCAAGTCAATCTGT+AGG | + | chr3_3:63064571-63064590 | Msa0463590:CDS | 45.0% | |
TGAGAGCAGAGTCAGAATCA+GGG | - | chr3_3:63064678-63064697 | None:intergenic | 45.0% | |
CTGATTGGAATTTGGAGGGT+AGG | + | chr3_3:63064722-63064741 | Msa0463590:CDS | 45.0% | |
TCAAGGGCAACTTCAGTAAG+TGG | - | chr3_3:63064772-63064791 | None:intergenic | 45.0% | |
! | GTAGAGGTCTAAGGTTCTCA+AGG | - | chr3_3:63064789-63064808 | None:intergenic | 45.0% |
TCACAGAGAGTAGAGGTCTA+AGG | - | chr3_3:63064798-63064817 | None:intergenic | 45.0% | |
GGATTCTTCACAGAGAGTAG+AGG | - | chr3_3:63064805-63064824 | None:intergenic | 45.0% | |
!! | GATTTGTTGAGCTCAGCACA+AGG | + | chr3_3:63064892-63064911 | Msa0463590:CDS | 45.0% |
GAAGACTTCAGAATCACACG+AGG | + | chr3_3:63064951-63064970 | Msa0463590:CDS | 45.0% | |
!! | GAAGGTGTTCCTTAAGATCC+AGG | - | chr3_3:63064984-63065003 | None:intergenic | 45.0% |
GGATCTTAAGGAACACCTTC+AGG | + | chr3_3:63064984-63065003 | Msa0463590:CDS | 45.0% | |
! | TCTTTTCACTGGGAACCTGA+AGG | - | chr3_3:63065002-63065021 | None:intergenic | 45.0% |
GTACTGGAGAGATTGTAGTC+TGG | + | chr3_3:63065356-63065375 | Msa0463590:CDS | 45.0% | |
! | GAGAGATTGTAGTCTGGCTT+TGG | + | chr3_3:63065362-63065381 | Msa0463590:CDS | 45.0% |
ATGAAGATGGAAGGATCCTC+TGG | + | chr3_3:63065579-63065598 | Msa0463590:CDS | 45.0% | |
TGACAACAAAGTTCCTCCAG+AGG | - | chr3_3:63065598-63065617 | None:intergenic | 45.0% | |
! | ACATCAAAGTCTGGAACTCG+TGG | - | chr3_3:63065717-63065736 | None:intergenic | 45.0% |
CAATATATCTCGGGCCATCT+TGG | - | chr3_3:63065784-63065803 | None:intergenic | 45.0% | |
CAAGATGGCCCGAGATATAT+TGG | + | chr3_3:63065782-63065801 | Msa0463590:CDS | 45.0% | |
TCAGAAGGAACGGTAGAAAC+TGG | - | chr3_3:63065813-63065832 | None:intergenic | 45.0% | |
ACCATACTGCATCCAGTCTT+TGG | - | chr3_3:63065919-63065938 | None:intergenic | 45.0% | |
ACAAGCGCAGTTGAAGATTC+GGG | - | chr3_3:63065945-63065964 | None:intergenic | 45.0% | |
CACAAGCGCAGTTGAAGATT+CGG | - | chr3_3:63065946-63065965 | None:intergenic | 45.0% | |
CTTGTACCCAGTATGTTGGT+AGG | + | chr3_3:63065999-63066018 | Msa0463590:three_prime_UTR | 45.0% | |
TCAGATTGAGCTGCACATCA+AGG | - | chr3_3:63066183-63066202 | None:intergenic | 45.0% | |
! | GCACACTTTTGCTTTGCCAT+TGG | + | chr3_3:63066309-63066328 | Msa0463590:three_prime_UTR | 45.0% |
CTGAATCTGGAAACGCGGAA+CGG | - | chr3_3:63060167-63060186 | None:intergenic | 50.0% | |
! | GCAGCAACGTTTTGTCGGAT+AGG | - | chr3_3:63060551-63060570 | None:intergenic | 50.0% |
GGCCTCATTGTCCATTACCT+TGG | - | chr3_3:63060965-63060984 | None:intergenic | 50.0% | |
GTATTACTTCATGGCCGGAC+AGG | - | chr3_3:63061480-63061499 | None:intergenic | 50.0% | |
CGAGCACATGCATTCTGCTA+TGG | + | chr3_3:63061940-63061959 | Msa0463590:intron | 50.0% | |
GCAGGAGAGGATATACTGAC+AGG | + | chr3_3:63062709-63062728 | Msa0463590:intron | 50.0% | |
AGGATGGCTACCCTTGAAGA+AGG | + | chr3_3:63062729-63062748 | Msa0463590:exon | 50.0% | |
GATCTTGTAACCCAGGCTAC+TGG | + | chr3_3:63062888-63062907 | Msa0463590:CDS | 50.0% | |
AACCAAGTCGGCGATCAACT+TGG | + | chr3_3:63062987-63063006 | Msa0463590:CDS | 50.0% | |
GAATCGACCACATGGATGCT+GGG | - | chr3_3:63063056-63063075 | None:intergenic | 50.0% | |
AGAATCGACCACATGGATGC+TGG | - | chr3_3:63063057-63063076 | None:intergenic | 50.0% | |
! | CATCCATGTGGTCGATTCTG+AGG | + | chr3_3:63063058-63063077 | Msa0463590:CDS | 50.0% |
ATGCCTCAGAATCGACCACA+TGG | - | chr3_3:63063064-63063083 | None:intergenic | 50.0% | |
GGCATTGCCAAACAAAGGTG+TGG | + | chr3_3:63063079-63063098 | Msa0463590:CDS | 50.0% | |
ACAGCACAGCAATGAGGATG+CGG | + | chr3_3:63063148-63063167 | Msa0463590:CDS | 50.0% | |
AGCACAGCACAACAATGAGG+AGG | + | chr3_3:63063316-63063335 | Msa0463590:CDS | 50.0% | |
GATTTCTGCCTCGTGCATGA+CGG | - | chr3_3:63063567-63063586 | None:intergenic | 50.0% | |
! | ATGGGGTTGCATCTGAAGCT+CGG | + | chr3_3:63063594-63063613 | Msa0463590:CDS | 50.0% |
TACGCATCCGAACAGTCATC+TGG | + | chr3_3:63063757-63063776 | Msa0463590:CDS | 50.0% | |
TCTGGACAATCATGAGGCAC+TGG | + | chr3_3:63063775-63063794 | Msa0463590:CDS | 50.0% | |
!! | GGCGAGAGTGTTTCAGAGTT+AGG | - | chr3_3:63063815-63063834 | None:intergenic | 50.0% |
! | TGGGAATTGGCTAGCTGATC+AGG | - | chr3_3:63063836-63063855 | None:intergenic | 50.0% |
! | CAGTTAGCGCTGGATGTAGA+AGG | + | chr3_3:63064077-63064096 | Msa0463590:CDS | 50.0% |
CTGGTACCAGCCACCTTAAA+CGG | + | chr3_3:63064155-63064174 | Msa0463590:CDS | 50.0% | |
!! | AATGTGCCGTTTAAGGTGGC+TGG | - | chr3_3:63064164-63064183 | None:intergenic | 50.0% |
!! | TGGCAATGTGCCGTTTAAGG+TGG | - | chr3_3:63064168-63064187 | None:intergenic | 50.0% |
!! | CCTTGGCAATGTGCCGTTTA+AGG | - | chr3_3:63064171-63064190 | None:intergenic | 50.0% |
CCTTAAACGGCACATTGCCA+AGG | + | chr3_3:63064168-63064187 | Msa0463590:CDS | 50.0% | |
TAAACGGCACATTGCCAAGG+GGG | + | chr3_3:63064171-63064190 | Msa0463590:CDS | 50.0% | |
CCAAACTACGCAGAAGAGCT+GGG | - | chr3_3:63064201-63064220 | None:intergenic | 50.0% | |
TCCAAACTACGCAGAAGAGC+TGG | - | chr3_3:63064202-63064221 | None:intergenic | 50.0% | |
CCTTGAACGTGGGGTATATG+GGG | - | chr3_3:63064239-63064258 | None:intergenic | 50.0% | |
CCCTTGAACGTGGGGTATAT+GGG | - | chr3_3:63064240-63064259 | None:intergenic | 50.0% | |
CCCATATACCCCACGTTCAA+GGG | + | chr3_3:63064237-63064256 | Msa0463590:CDS | 50.0% | |
CCATATACCCCACGTTCAAG+GGG | + | chr3_3:63064238-63064257 | Msa0463590:CDS | 50.0% | |
! | GCGGTTCTGTATCGTCGTTT+TGG | - | chr3_3:63064292-63064311 | None:intergenic | 50.0% |
GCATGATTACCCCCTTCACA+TGG | + | chr3_3:63064378-63064397 | Msa0463590:CDS | 50.0% | |
GATGCTCAACCATGTGAAGG+GGG | - | chr3_3:63064390-63064409 | None:intergenic | 50.0% | |
GGATGCTCAACCATGTGAAG+GGG | - | chr3_3:63064391-63064410 | None:intergenic | 50.0% | |
CTGGATGCTCAACCATGTGA+AGG | - | chr3_3:63064393-63064412 | None:intergenic | 50.0% | |
CTTCACATGGTTGAGCATCC+AGG | + | chr3_3:63064391-63064410 | Msa0463590:CDS | 50.0% | |
TCTGCAACCCCAGTTCAACA+TGG | + | chr3_3:63064435-63064454 | Msa0463590:CDS | 50.0% | |
AGTGTCAGACCAAAACGTCC+TGG | - | chr3_3:63064544-63064563 | None:intergenic | 50.0% | |
!! | AGGACGTTTTGGTCTGACAC+TGG | + | chr3_3:63064543-63064562 | Msa0463590:CDS | 50.0% |
CTGAGAGCAGAGTCAGAATC+AGG | - | chr3_3:63064679-63064698 | None:intergenic | 50.0% | |
GGTTGCAGCTTCTGAACTGA+AGG | + | chr3_3:63065071-63065090 | Msa0463590:CDS | 50.0% | |
GATGGGGCTCCTTTGTAATC+AGG | - | chr3_3:63065126-63065145 | None:intergenic | 50.0% | |
GGGGCTTCAAGTATGTGCAA+AGG | - | chr3_3:63065176-63065195 | None:intergenic | 50.0% | |
! | TCTGCATATGCCGGTGTTAG+TGG | - | chr3_3:63065537-63065556 | None:intergenic | 50.0% |
ACACCGGCATATGCAGAAGA+AGG | + | chr3_3:63065540-63065559 | Msa0463590:CDS | 50.0% | |
AAGATGGAAGGATCCTCTGG+AGG | + | chr3_3:63065582-63065601 | Msa0463590:CDS | 50.0% | |
GTACCCCACACTTTCCAAGA+TGG | + | chr3_3:63065767-63065786 | Msa0463590:CDS | 50.0% | |
CACTTGTGTGTGCCAAAGAC+TGG | + | chr3_3:63065904-63065923 | Msa0463590:CDS | 50.0% | |
GCCAAAGACTGGATGCAGTA+TGG | + | chr3_3:63065915-63065934 | Msa0463590:CDS | 50.0% | |
! | TTTTACTGGGACTGCTCTCG+TGG | + | chr3_3:63066348-63066367 | Msa0463590:three_prime_UTR | 50.0% |
TTTACTGGGACTGCTCTCGT+GGG | + | chr3_3:63066349-63066368 | Msa0463590:three_prime_UTR | 50.0% | |
!! | GTGGGGTGGAGTACTGTTTA+GGG | + | chr3_3:63066367-63066386 | Msa0463590:three_prime_UTR | 50.0% |
! | AGTGGCGGAAGCGAGATCTT+GGG | - | chr3_3:63060112-63060131 | None:intergenic | 55.0% |
! | AAGTGGCGGAAGCGAGATCT+TGG | - | chr3_3:63060113-63060132 | None:intergenic | 55.0% |
AATCTGGAAACGCGGAACGG+CGG | - | chr3_3:63060164-63060183 | None:intergenic | 55.0% | |
GCCCAGAGACACGATAGTAG+TGG | - | chr3_3:63062378-63062397 | None:intergenic | 55.0% | |
CTTGTAACCCAGGCTACTGG+TGG | + | chr3_3:63062891-63062910 | Msa0463590:CDS | 55.0% | |
TGCATCACCACCAGTAGCCT+GGG | - | chr3_3:63062901-63062920 | None:intergenic | 55.0% | |
TTGCATCACCACCAGTAGCC+TGG | - | chr3_3:63062902-63062921 | None:intergenic | 55.0% | |
!! | CACCAAGTTGATCGCCGACT+TGG | - | chr3_3:63062992-63063011 | None:intergenic | 55.0% |
TGAAGCACAGCCCATCAGTG+AGG | + | chr3_3:63063379-63063398 | Msa0463590:CDS | 55.0% | |
CCCAGCTCTTCTGCGTAGTT+TGG | + | chr3_3:63064198-63064217 | Msa0463590:CDS | 55.0% | |
CCCCATATACCCCACGTTCA+AGG | + | chr3_3:63064236-63064255 | Msa0463590:CDS | 55.0% | |
CCCCTTGAACGTGGGGTATA+TGG | - | chr3_3:63064241-63064260 | None:intergenic | 55.0% | |
ACCACTTCCCCTTGAACGTG+GGG | - | chr3_3:63064248-63064267 | None:intergenic | 55.0% | |
CACCACTTCCCCTTGAACGT+GGG | - | chr3_3:63064249-63064268 | None:intergenic | 55.0% | |
GCAGAGTCAGAATCAGGGCA+TGG | - | chr3_3:63064673-63064692 | None:intergenic | 55.0% | |
GAGCCCCATCTATTCCAGAC+TGG | + | chr3_3:63065136-63065155 | Msa0463590:CDS | 55.0% | |
! | CGGTGTTAGTGGCAGAGGAA+GGG | - | chr3_3:63065526-63065545 | None:intergenic | 55.0% |
CCTTCCTCTGCCACTAACAC+CGG | + | chr3_3:63065524-63065543 | Msa0463590:CDS | 55.0% | |
! | TATGCCGGTGTTAGTGGCAG+AGG | - | chr3_3:63065531-63065550 | None:intergenic | 55.0% |
! | GGGCCATCTTGGAAAGTGTG+GGG | - | chr3_3:63065773-63065792 | None:intergenic | 55.0% |
! | CGGGCCATCTTGGAAAGTGT+GGG | - | chr3_3:63065774-63065793 | None:intergenic | 55.0% |
TCGGGCCATCTTGGAAAGTG+TGG | - | chr3_3:63065775-63065794 | None:intergenic | 55.0% | |
TTCCTTGCGTCCAGAGACAG+TGG | + | chr3_3:63065878-63065897 | Msa0463590:CDS | 55.0% | |
ACAAGTGCCTCCACTGTCTC+TGG | - | chr3_3:63065891-63065910 | None:intergenic | 55.0% | |
TTACTGGGACTGCTCTCGTG+GGG | + | chr3_3:63066350-63066369 | Msa0463590:three_prime_UTR | 55.0% | |
!! | CGTGGGGTGGAGTACTGTTT+AGG | + | chr3_3:63066366-63066385 | Msa0463590:three_prime_UTR | 55.0% |
TCGACCACATGGATGCTGGG+TGG | - | chr3_3:63063053-63063072 | None:intergenic | 60.0% | |
AGCACAGCCCATCAGTGAGG+TGG | + | chr3_3:63063382-63063401 | Msa0463590:CDS | 60.0% | |
TGATTCGCAGCCGAGCAGTG+AGG | + | chr3_3:63063442-63063461 | Msa0463590:CDS | 60.0% | |
CGATGAAGCCGTCATGCACG+AGG | + | chr3_3:63063556-63063575 | Msa0463590:CDS | 60.0% | |
ACTACGCAGAAGAGCTGGGC+AGG | - | chr3_3:63064197-63064216 | None:intergenic | 60.0% | |
ACCCCACGTTCAAGGGGAAG+TGG | + | chr3_3:63064244-63064263 | Msa0463590:CDS | 60.0% | |
GCACCACTTCCCCTTGAACG+TGG | - | chr3_3:63064250-63064269 | None:intergenic | 60.0% | |
! | CCGGTGTTAGTGGCAGAGGA+AGG | - | chr3_3:63065527-63065546 | None:intergenic | 60.0% |
CTCCACTGTCTCTGGACGCA+AGG | - | chr3_3:63065883-63065902 | None:intergenic | 60.0% | |
CTTGCGTCCAGAGACAGTGG+AGG | + | chr3_3:63065881-63065900 | Msa0463590:CDS | 60.0% | |
TCTCGCTTCCGCCACTTCCG+CGG | + | chr3_3:63060116-63060135 | Msa0463590:five_prime_UTR | 65.0% | |
GAAGCTCGGAACCGCGGAAG+TGG | - | chr3_3:63060130-63060149 | None:intergenic | 65.0% | |
GATGCTGGGTGGTGCCTCAG+TGG | - | chr3_3:63063042-63063061 | None:intergenic | 65.0% | |
GGCACCACCCAGCATCCATG+TGG | + | chr3_3:63063046-63063065 | Msa0463590:CDS | 65.0% | |
GCTCGGAACCGCGGAAGTGG+CGG | - | chr3_3:63060127-63060146 | None:intergenic | 70.0% | |
GGAGCGGAAGCTCGGAACCG+CGG | - | chr3_3:63060136-63060155 | None:intergenic | 70.0% | |
CGGTTCCGAGCTTCCGCTCC+CGG | + | chr3_3:63060136-63060155 | Msa0463590:five_prime_UTR | 70.0% | |
AAACGCGGAACGGCGGTGCC+GGG | - | chr3_3:63060157-63060176 | None:intergenic | 70.0% | |
GAAACGCGGAACGGCGGTGC+CGG | - | chr3_3:63060158-63060177 | None:intergenic | 70.0% | |
AAGAGCTGGGCAGGCCCCCT+TGG | - | chr3_3:63064188-63064207 | None:intergenic | 70.0% | |
CTGGGACTGCTCTCGTGGGG+TGG | + | chr3_3:63066353-63066372 | Msa0463590:three_prime_UTR | 70.0% | |
! | CGGTGCCGGGAGCGGAAGCT+CGG | - | chr3_3:63060144-63060163 | None:intergenic | 75.0% |
!! | CGGAACGGCGGTGCCGGGAG+CGG | - | chr3_3:63060152-63060171 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 63060021 | 63066408 | 63060021 | ID=Msa0463590;Name=Msa0463590 |
chr3_3 | mRNA | 63060021 | 63066408 | 63060021 | ID=Msa0463590-mRNA-1;Parent=Msa0463590;Name=Msa0463590-mRNA-1;_AED=0.00;_eAED=0.00;_QI=300|1|1|1|0.5|0.66|3|428|1082 |
chr3_3 | exon | 63060021 | 63060206 | 63060021 | ID=Msa0463590-mRNA-1:exon:13616;Parent=Msa0463590-mRNA-1 |
chr3_3 | exon | 63061833 | 63061927 | 63061833 | ID=Msa0463590-mRNA-1:exon:13617;Parent=Msa0463590-mRNA-1 |
chr3_3 | exon | 63062713 | 63066408 | 63062713 | ID=Msa0463590-mRNA-1:exon:13618;Parent=Msa0463590-mRNA-1 |
chr3_3 | five_prime_UTR | 63060021 | 63060206 | 63060021 | ID=Msa0463590-mRNA-1:five_prime_utr;Parent=Msa0463590-mRNA-1 |
chr3_3 | five_prime_UTR | 63061833 | 63061927 | 63061833 | ID=Msa0463590-mRNA-1:five_prime_utr;Parent=Msa0463590-mRNA-1 |
chr3_3 | five_prime_UTR | 63062713 | 63062731 | 63062713 | ID=Msa0463590-mRNA-1:five_prime_utr;Parent=Msa0463590-mRNA-1 |
chr3_3 | CDS | 63062732 | 63065980 | 63062732 | ID=Msa0463590-mRNA-1:cds;Parent=Msa0463590-mRNA-1 |
chr3_3 | three_prime_UTR | 63065981 | 63066408 | 63065981 | ID=Msa0463590-mRNA-1:three_prime_utr;Parent=Msa0463590-mRNA-1 |
Gene Sequence |
Protein sequence |