Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131230 | RHN42187.1 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131230 | sp|Q6RYA0|SABP2_TOBAC | 59.608 | 255 | 99 | 1 | 10 | 260 | 5 | 259 | 4.93e-114 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131230 | A0A396GUA0 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0164910 | Msa1131230 | 0.802320 | 5.932077e-49 | -8.615850e-47 |
| Msa0213540 | Msa1131230 | 0.849044 | 4.163396e-60 | -8.615850e-47 |
| Msa1013070 | Msa1131230 | 0.812166 | 4.860129e-51 | -8.615850e-47 |
| Msa1062040 | Msa1131230 | 0.814375 | 1.590951e-51 | -8.615850e-47 |
| Msa1094280 | Msa1131230 | 0.821198 | 4.587355e-53 | -8.615850e-47 |
| Msa0331020 | Msa1131230 | 0.838561 | 2.673579e-57 | -8.615850e-47 |
| Msa1131230 | Msa1203480 | 0.958109 | 5.298179e-116 | -8.615850e-47 |
| Msa1131230 | Msa1267480 | 0.958368 | 2.802971e-116 | -8.615850e-47 |
| Msa1131230 | Msa1267510 | 0.957301 | 3.775892e-115 | -8.615850e-47 |
| Msa1131230 | Msa1305180 | 0.983222 | 3.703700e-157 | -8.615850e-47 |
| Msa1131230 | Msa1305330 | 0.985940 | 3.714652e-165 | -8.615850e-47 |
| Msa0545050 | Msa1131230 | 0.800118 | 1.674747e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131230 | MtrunA17_Chr8g0374141 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Msa1131230 | MtrunA17_Chr5g0402901 | 62.302 | 252 | 95 | 0 | 9 | 260 | 10 | 261 | 1.77e-116 | 334 |
| Msa1131230 | MtrunA17_Chr5g0402881 | 57.854 | 261 | 109 | 1 | 1 | 260 | 18 | 278 | 5.75e-109 | 316 |
| Msa1131230 | MtrunA17_Chr5g0402851 | 42.912 | 261 | 144 | 2 | 5 | 260 | 2 | 262 | 9.25e-74 | 226 |
| Msa1131230 | MtrunA17_Chr5g0402871 | 45.525 | 257 | 131 | 4 | 11 | 260 | 5 | 259 | 6.30e-73 | 223 |
| Msa1131230 | MtrunA17_Chr8g0336391 | 43.191 | 257 | 137 | 5 | 11 | 260 | 27 | 281 | 7.73e-69 | 214 |
| Msa1131230 | MtrunA17_Chr3g0104871 | 41.634 | 257 | 140 | 4 | 10 | 260 | 18 | 270 | 2.26e-66 | 207 |
| Msa1131230 | MtrunA17_Chr5g0402841 | 40.856 | 257 | 146 | 3 | 9 | 260 | 6 | 261 | 1.84e-65 | 204 |
| Msa1131230 | MtrunA17_Chr8g0336441 | 42.023 | 257 | 139 | 5 | 10 | 260 | 26 | 278 | 3.92e-63 | 199 |
| Msa1131230 | MtrunA17_Chr8g0336411 | 41.699 | 259 | 139 | 5 | 10 | 260 | 27 | 281 | 5.06e-62 | 196 |
| Msa1131230 | MtrunA17_Chr8g0336381 | 40.385 | 260 | 145 | 5 | 9 | 260 | 5 | 262 | 1.88e-60 | 192 |
| Msa1131230 | MtrunA17_Chr8g0336401 | 38.996 | 259 | 150 | 5 | 10 | 260 | 26 | 284 | 5.60e-59 | 189 |
| Msa1131230 | MtrunA17_Chr7g0219561 | 33.730 | 252 | 158 | 3 | 11 | 257 | 124 | 371 | 1.66e-37 | 135 |
| Msa1131230 | MtrunA17_Chr3g0077351 | 33.077 | 260 | 158 | 5 | 7 | 257 | 90 | 342 | 1.10e-36 | 132 |
| Msa1131230 | MtrunA17_Chr3g0128581 | 32.927 | 246 | 153 | 5 | 7 | 246 | 32 | 271 | 3.27e-34 | 125 |
| Msa1131230 | MtrunA17_Chr5g0428471 | 31.395 | 258 | 166 | 4 | 9 | 260 | 28 | 280 | 3.53e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131230 | AT2G23620.1 | 54.086 | 257 | 114 | 2 | 9 | 261 | 7 | 263 | 2.59e-102 | 298 |
| Msa1131230 | AT2G23600.1 | 52.964 | 253 | 115 | 2 | 9 | 257 | 7 | 259 | 2.60e-94 | 278 |
| Msa1131230 | AT2G23610.1 | 52.734 | 256 | 117 | 3 | 9 | 260 | 7 | 262 | 3.30e-94 | 278 |
| Msa1131230 | AT2G23600.2 | 52.964 | 253 | 115 | 2 | 9 | 257 | 22 | 274 | 3.66e-94 | 278 |
| Msa1131230 | AT2G23590.1 | 47.638 | 254 | 128 | 1 | 7 | 260 | 23 | 271 | 8.07e-89 | 265 |
| Msa1131230 | AT4G37150.1 | 49.020 | 255 | 125 | 2 | 10 | 260 | 2 | 255 | 4.67e-88 | 262 |
| Msa1131230 | AT2G23580.1 | 49.805 | 257 | 124 | 2 | 9 | 260 | 6 | 262 | 6.41e-88 | 262 |
| Msa1131230 | AT5G10300.1 | 49.027 | 257 | 125 | 2 | 9 | 261 | 4 | 258 | 5.80e-87 | 259 |
| Msa1131230 | AT2G23550.1 | 48.638 | 257 | 127 | 2 | 9 | 260 | 6 | 262 | 9.50e-84 | 251 |
| Msa1131230 | AT2G23550.4 | 48.638 | 257 | 127 | 2 | 9 | 260 | 13 | 269 | 1.24e-83 | 251 |
| Msa1131230 | AT2G23560.1 | 46.063 | 254 | 135 | 2 | 9 | 260 | 6 | 259 | 4.83e-80 | 242 |
| Msa1131230 | AT2G23610.2 | 46.640 | 253 | 92 | 2 | 9 | 260 | 7 | 217 | 9.01e-78 | 234 |
| Msa1131230 | AT3G50440.1 | 43.478 | 253 | 139 | 2 | 12 | 260 | 22 | 274 | 7.98e-73 | 224 |
| Msa1131230 | AT2G23550.2 | 45.312 | 256 | 108 | 2 | 9 | 260 | 6 | 233 | 6.79e-70 | 215 |
| Msa1131230 | AT2G23600.3 | 52.439 | 164 | 74 | 2 | 9 | 168 | 22 | 185 | 5.33e-59 | 186 |
| Msa1131230 | AT2G23580.2 | 48.045 | 179 | 85 | 3 | 9 | 182 | 6 | 181 | 5.54e-53 | 171 |
| Msa1131230 | AT2G23570.1 | 48.315 | 178 | 88 | 1 | 87 | 260 | 1 | 178 | 6.65e-53 | 170 |
| Msa1131230 | AT2G23550.3 | 47.273 | 165 | 82 | 2 | 9 | 168 | 13 | 177 | 2.32e-50 | 164 |
| Msa1131230 | AT5G10300.2 | 47.590 | 166 | 81 | 2 | 9 | 170 | 4 | 167 | 1.38e-47 | 157 |
| Msa1131230 | AT4G37140.1 | 54.701 | 117 | 53 | 0 | 10 | 126 | 2 | 118 | 2.26e-45 | 149 |
| Msa1131230 | AT4G09900.1 | 33.074 | 257 | 156 | 5 | 10 | 257 | 97 | 346 | 1.36e-39 | 140 |
| Msa1131230 | AT1G26360.1 | 32.669 | 251 | 164 | 2 | 10 | 257 | 188 | 436 | 3.17e-39 | 142 |
| Msa1131230 | AT1G33990.1 | 32.443 | 262 | 164 | 5 | 3 | 257 | 90 | 345 | 4.51e-39 | 139 |
| Msa1131230 | AT3G29770.1 | 35.294 | 255 | 150 | 5 | 11 | 257 | 138 | 385 | 1.01e-37 | 137 |
| Msa1131230 | AT5G58310.1 | 32.700 | 263 | 160 | 5 | 7 | 257 | 1 | 258 | 2.20e-37 | 132 |
| Msa1131230 | AT4G37140.2 | 59.341 | 91 | 37 | 0 | 10 | 100 | 2 | 92 | 3.50e-37 | 127 |
| Msa1131230 | AT1G69240.1 | 31.518 | 257 | 161 | 6 | 10 | 257 | 186 | 436 | 1.11e-36 | 135 |
| Msa1131230 | AT4G16690.1 | 31.707 | 246 | 153 | 4 | 11 | 249 | 12 | 249 | 2.42e-33 | 122 |
| Msa1131230 | AT3G10870.1 | 30.738 | 244 | 157 | 5 | 11 | 246 | 20 | 259 | 8.79e-31 | 115 |
| Msa1131230 | AT3G29770.2 | 40.278 | 72 | 43 | 0 | 11 | 82 | 138 | 209 | 1.94e-12 | 66.2 |
Find 71 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCATTAATCCCAGCATTT+TGG | 0.157812 | 7_3:-83779737 | None:intergenic |
| GAGCTTATTGGACAAGAATT+TGG | 0.162838 | 7_3:-83779381 | None:intergenic |
| GAGGCCAGGGTCCCTCTTTA+TGG | 0.202954 | 7_3:+83779599 | Msa1131230:CDS |
| GTTCTTGACCTTTCAGCTTC+TGG | 0.234804 | 7_3:+83776790 | Msa1131230:CDS |
| AACAAAACATCAATGTTCTT+TGG | 0.296879 | 7_3:+83779356 | Msa1131230:CDS |
| GCAAGATAACTTCTCTAAAC+AGG | 0.300900 | 7_3:+83779635 | Msa1131230:CDS |
| ACATGCTGATTCCTTTATTT+CGG | 0.312733 | 7_3:-83779903 | None:intergenic |
| TGAAGTTTAGCTTAATTTGT+TGG | 0.339405 | 7_3:+83779860 | Msa1131230:three_prime_UTR |
| AGCTTATTGGACAAGAATTT+GGG | 0.339872 | 7_3:-83779380 | None:intergenic |
| AACTTCTCTAAACAGGGTTA+TGG | 0.360676 | 7_3:+83779642 | Msa1131230:CDS |
| ATTCTTGTGGGTCACAGTCT+TGG | 0.390920 | 7_3:+83776910 | Msa1131230:CDS |
| GGAGTGTTGATAGAGCTTAT+TGG | 0.392660 | 7_3:-83779393 | None:intergenic |
| ACTTCTCTAAACAGGGTTAT+GGG | 0.399672 | 7_3:+83779643 | Msa1131230:CDS |
| AATGGAACAATTTCCAGAAA+AGG | 0.417631 | 7_3:+83776954 | Msa1131230:CDS |
| ATCCAGTGTTGAAATTTCAA+TGG | 0.421026 | 7_3:-83779711 | None:intergenic |
| GATTTAGCAGGATCTTGAAT+TGG | 0.423617 | 7_3:+83779563 | Msa1131230:intron |
| TGAACCATTGTTGAAGCTAA+TGG | 0.426644 | 7_3:+83776861 | Msa1131230:CDS |
| ATCTTCAAGTTTCTTCAAGT+TGG | 0.431463 | 7_3:-83776815 | None:intergenic |
| CTTGTGGGTCACAGTCTTGG+AGG | 0.449534 | 7_3:+83776913 | Msa1131230:CDS |
| GTGCACAAAATTTAATTGCT+AGG | 0.449601 | 7_3:+83776674 | Msa1131230:CDS |
| TGCTTCTTATGTCATGGAAA+AGG | 0.451368 | 7_3:+83777026 | Msa1131230:CDS |
| CACTGGATGATCCAAAATGC+TGG | 0.456893 | 7_3:+83779726 | Msa1131230:CDS |
| GATCAAAGGGGCAGATCATA+TGG | 0.460208 | 7_3:+83779767 | Msa1131230:CDS |
| TGTCCAACCATTCAGCCGTC+GGG | 0.460887 | 7_3:-83779313 | None:intergenic |
| ATGATGTATATGAGATCAAA+GGG | 0.461047 | 7_3:+83779754 | Msa1131230:CDS |
| ATGGTGCTTGCCATGGTGCT+TGG | 0.470545 | 7_3:+83776716 | Msa1131230:CDS |
| TTCCATTGAAATTTCAACAC+TGG | 0.470781 | 7_3:+83779709 | Msa1131230:CDS |
| GCCAAGACTTTATTGAGGCC+AGG | 0.472046 | 7_3:+83779585 | Msa1131230:CDS |
| CACAATTCCACCAAATGAAA+AGG | 0.475812 | 7_3:+83776885 | Msa1131230:CDS |
| CTTGCCATGGTGCTTGGAGT+TGG | 0.476673 | 7_3:+83776722 | Msa1131230:CDS |
| GAAGCATTGTGTTGAATGTC+CGG | 0.482394 | 7_3:-83777009 | None:intergenic |
| CCCTGGCCTCAATAAAGTCT+TGG | 0.486588 | 7_3:-83779586 | None:intergenic |
| ACACAATGCTTCTTATGTCA+TGG | 0.491092 | 7_3:+83777020 | Msa1131230:CDS |
| AATGAAAAGGTGATTCTTGT+GGG | 0.497441 | 7_3:+83776898 | Msa1131230:CDS |
| CTTGTACATGGTGCTTGCCA+TGG | 0.498303 | 7_3:+83776709 | Msa1131230:CDS |
| CATAATGATTATTGTTGTTG+TGG | 0.503508 | 7_3:-83776650 | None:intergenic |
| TACCCCGACGGCTGAATGGT+TGG | 0.505808 | 7_3:+83779310 | Msa1131230:CDS |
| AGAGTACCCCGACGGCTGAA+TGG | 0.512702 | 7_3:+83779306 | Msa1131230:CDS |
| ATTGTTTGCAATGAAGACCT+TGG | 0.520269 | 7_3:+83779684 | Msa1131230:CDS |
| AGAGAATTACATAGTTCTTG+TGG | 0.522605 | 7_3:-83779804 | None:intergenic |
| CCAAGACTTTATTGAGGCCA+GGG | 0.522924 | 7_3:+83779586 | Msa1131230:CDS |
| GAAATTTCAATGGAATTCCA+AGG | 0.525367 | 7_3:-83779701 | None:intergenic |
| GTGTCCAACCATTCAGCCGT+CGG | 0.529692 | 7_3:-83779314 | None:intergenic |
| AAGCATTATGTTCTTGTACA+TGG | 0.531450 | 7_3:+83776697 | Msa1131230:CDS |
| AATGATGTATATGAGATCAA+AGG | 0.543714 | 7_3:+83779753 | Msa1131230:CDS |
| GAGAAACTTTATTGTAGAGG+TGG | 0.543747 | 7_3:+83779936 | Msa1131230:three_prime_UTR |
| AAATGAAAAGGTGATTCTTG+TGG | 0.544198 | 7_3:+83776897 | Msa1131230:CDS |
| TTTCCAGAAAAGGTTGCCGT+TGG | 0.552011 | 7_3:+83776964 | Msa1131230:CDS |
| AATTGGCCAAGACTTTATTG+AGG | 0.557607 | 7_3:+83779580 | Msa1131230:CDS |
| TGTGAGAAACTTTATTGTAG+AGG | 0.558702 | 7_3:+83779933 | Msa1131230:three_prime_UTR |
| TGGTGCTTGGAGTTGGTACA+AGG | 0.561033 | 7_3:+83776729 | Msa1131230:CDS |
| GTGGCCATTAGCTTCAACAA+TGG | 0.573860 | 7_3:-83776865 | None:intergenic |
| GAGTCAAGTCTTCCATAAAG+AGG | 0.579389 | 7_3:-83779611 | None:intergenic |
| AGTTGGTTCCAGAAGCTGAA+AGG | 0.584796 | 7_3:-83776798 | None:intergenic |
| AAGCCACGTTTAGAATCTGC+TGG | 0.586149 | 7_3:+83776754 | Msa1131230:CDS |
| ACTGGATGATCCAAAATGCT+GGG | 0.589459 | 7_3:+83779727 | Msa1131230:CDS |
| CAAGATAACTTCTCTAAACA+GGG | 0.605122 | 7_3:+83779636 | Msa1131230:CDS |
| ACTTAGCATAGCTCTTGCAA+TGG | 0.605259 | 7_3:+83776936 | Msa1131230:CDS |
| AGTCAAGTCTTCCATAAAGA+GGG | 0.612508 | 7_3:-83779610 | None:intergenic |
| TTTAGAATCTGCTGGTCATG+TGG | 0.623515 | 7_3:+83776762 | Msa1131230:CDS |
| GACACTGAATTCTGCCAGTG+TGG | 0.627184 | 7_3:+83779332 | Msa1131230:CDS |
| TCTTCCATAAAGAGGGACCC+TGG | 0.632528 | 7_3:-83779603 | None:intergenic |
| GTCCAACCATTCAGCCGTCG+GGG | 0.648788 | 7_3:-83779312 | None:intergenic |
| ACGTGTAGTTACCTCAGTGG+AGG | 0.650895 | 7_3:-83779414 | None:intergenic |
| AGCTGTTAAGAAAACACCAA+CGG | 0.651976 | 7_3:-83776980 | None:intergenic |
| TTAACGTGTAGTTACCTCAG+TGG | 0.666283 | 7_3:-83779417 | None:intergenic |
| TTGCAAACAATAAAAGCACG+TGG | 0.692906 | 7_3:-83779672 | None:intergenic |
| TGTACCAACTCCAAGCACCA+TGG | 0.696634 | 7_3:-83776726 | None:intergenic |
| TGACCAGCAGATTCTAAACG+TGG | 0.719220 | 7_3:-83776757 | None:intergenic |
| TGATGTATATGAGATCAAAG+GGG | 0.769291 | 7_3:+83779755 | Msa1131230:CDS |
| CTATCAACACTCCTCCACTG+AGG | 0.776664 | 7_3:+83779403 | Msa1131230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAAAACATAAAAAG+GGG | - | chr7_3:83778191-83778210 | None:intergenic | 10.0% |
| !! | CATATAATAAAACATAAAAA+GGG | - | chr7_3:83778192-83778211 | None:intergenic | 10.0% |
| !! | ACATATAATAAAACATAAAA+AGG | - | chr7_3:83778193-83778212 | None:intergenic | 10.0% |
| !!! | AAATACATTTTATTCATTTA+TGG | - | chr7_3:83778554-83778573 | None:intergenic | 10.0% |
| !!! | CATAATAAGTAATTTTTATT+TGG | - | chr7_3:83778638-83778657 | None:intergenic | 10.0% |
| !! | TTTATAACAAAATTTAGATT+AGG | + | chr7_3:83778707-83778726 | Msa1131230:intron | 10.0% |
| !! | TTATAACAAAATTTAGATTA+GGG | + | chr7_3:83778708-83778727 | Msa1131230:intron | 10.0% |
| !! | ACAAAAAATAAGATTAATAA+TGG | - | chr7_3:83779264-83779283 | None:intergenic | 10.0% |
| !!! | TAGTTTTTATGAAATTTTGT+AGG | + | chr7_3:83777156-83777175 | Msa1131230:intron | 15.0% |
| !!! | ATAAGTCTTATTTAATCTAA+CGG | - | chr7_3:83777238-83777257 | None:intergenic | 15.0% |
| !! | GAAAATAAATTAAAAAGTTG+TGG | - | chr7_3:83777372-83777391 | None:intergenic | 15.0% |
| !! | TACTTCAGAAAATAATATAA+GGG | - | chr7_3:83777566-83777585 | None:intergenic | 15.0% |
| !! | TTACTTCAGAAAATAATATA+AGG | - | chr7_3:83777567-83777586 | None:intergenic | 15.0% |
| !!! | GAATTTGTAAAATTTTGTTA+TGG | + | chr7_3:83777679-83777698 | Msa1131230:intron | 15.0% |
| !! | ATACATTTAGTATACAAAAT+TGG | - | chr7_3:83777954-83777973 | None:intergenic | 15.0% |
| !! | TATAATAAAACATAAAAAGG+GGG | - | chr7_3:83778190-83778209 | None:intergenic | 15.0% |
| !! | CCTATATTTATAAAAACAAA+TGG | - | chr7_3:83778895-83778914 | None:intergenic | 15.0% |
| !!! | CCATTTGTTTTTATAAATAT+AGG | + | chr7_3:83778892-83778911 | Msa1131230:intron | 15.0% |
| !! | TCACAAATATGATTTCTATA+TGG | + | chr7_3:83777112-83777131 | Msa1131230:intron | 20.0% |
| !!! | TTTTTATGAAATTTTGTAGG+TGG | + | chr7_3:83777159-83777178 | Msa1131230:intron | 20.0% |
| !!! | TTTCCATTTTTTTTTGTCAA+TGG | - | chr7_3:83777517-83777536 | None:intergenic | 20.0% |
| !!! | TGGAAAATTTGAGTTATAAA+AGG | - | chr7_3:83777593-83777612 | None:intergenic | 20.0% |
| !!! | TAACTATTTAGCATTTTTGT+CGG | + | chr7_3:83778092-83778111 | Msa1131230:intron | 20.0% |
| !! | ATAATAAAACATAAAAAGGG+GGG | - | chr7_3:83778189-83778208 | None:intergenic | 20.0% |
| !! | ATTTGTCCTTTACAATAAAA+TGG | + | chr7_3:83778231-83778250 | Msa1131230:intron | 20.0% |
| !!! | AGTTAAATTCTTGATACTTT+TGG | - | chr7_3:83778383-83778402 | None:intergenic | 20.0% |
| !! | TCATACAAGAAAAATAGATT+AGG | + | chr7_3:83778932-83778951 | Msa1131230:intron | 20.0% |
| !! | TGACAATTAAAAAGTAATGA+AGG | - | chr7_3:83779114-83779133 | None:intergenic | 20.0% |
| !! | TTGAAGTTTCCATTAAAAAA+TGG | + | chr7_3:83779502-83779521 | Msa1131230:intron | 20.0% |
| !!! | AATTGTACTCCATTTTTTAA+TGG | - | chr7_3:83779514-83779533 | None:intergenic | 20.0% |
| !! | CATAATGATTATTGTTGTTG+TGG | - | chr7_3:83776653-83776672 | None:intergenic | 25.0% |
| ! | TCAATGGTGATATTTATTGT+GGG | - | chr7_3:83777501-83777520 | None:intergenic | 25.0% |
| ! | TCACCATTGACAAAAAAAAA+TGG | + | chr7_3:83777511-83777530 | Msa1131230:intron | 25.0% |
| !!! | AAAATTTTGTTATGGAACGA+AGG | + | chr7_3:83777687-83777706 | Msa1131230:intron | 25.0% |
| !! | TCAATTTTTAACACAGACAA+TGG | + | chr7_3:83777755-83777774 | Msa1131230:intron | 25.0% |
| ! | CATTTAGTATACAAAATTGG+TGG | - | chr7_3:83777951-83777970 | None:intergenic | 25.0% |
| !! | TTCCTCTTAATTTGAATTTG+TGG | + | chr7_3:83778676-83778695 | Msa1131230:intron | 25.0% |
| ! | ATATAAAACGACAAGTAAGT+AGG | - | chr7_3:83779050-83779069 | None:intergenic | 25.0% |
| !! | TCTAAGACAATTAAGTAAAC+TGG | - | chr7_3:83779153-83779172 | None:intergenic | 25.0% |
| !!! | AATTTTAAAACGACAAGCAA+GGG | - | chr7_3:83779187-83779206 | None:intergenic | 25.0% |
| ! | CATTAATTACTGAAGAGATA+TGG | + | chr7_3:83779215-83779234 | Msa1131230:intron | 25.0% |
| ! | AACAAAACATCAATGTTCTT+TGG | + | chr7_3:83779356-83779375 | Msa1131230:CDS | 25.0% |
| ! | ACTAATAAAGACAAACTACT+TGG | + | chr7_3:83779541-83779560 | Msa1131230:intron | 25.0% |
| ! | AATGATGTATATGAGATCAA+AGG | + | chr7_3:83779753-83779772 | Msa1131230:CDS | 25.0% |
| ! | ATGATGTATATGAGATCAAA+GGG | + | chr7_3:83779754-83779773 | Msa1131230:CDS | 25.0% |
| !!! | TGAAGTTTAGCTTAATTTGT+TGG | + | chr7_3:83779860-83779879 | Msa1131230:three_prime_UTR | 25.0% |
| !!! | TTACTTTTTGTCCGAAATAA+AGG | + | chr7_3:83779892-83779911 | Msa1131230:three_prime_UTR | 25.0% |
| GTGCACAAAATTTAATTGCT+AGG | + | chr7_3:83776674-83776693 | Msa1131230:CDS | 30.0% | |
| AAGCATTATGTTCTTGTACA+TGG | + | chr7_3:83776697-83776716 | Msa1131230:CDS | 30.0% | |
| ! | ATCTTCAAGTTTCTTCAAGT+TGG | - | chr7_3:83776818-83776837 | None:intergenic | 30.0% |
| ! | ACAAGAATCACCTTTTCATT+TGG | - | chr7_3:83776898-83776917 | None:intergenic | 30.0% |
| AAATGAAAAGGTGATTCTTG+TGG | + | chr7_3:83776897-83776916 | Msa1131230:CDS | 30.0% | |
| AATGAAAAGGTGATTCTTGT+GGG | + | chr7_3:83776898-83776917 | Msa1131230:CDS | 30.0% | |
| AATGGAACAATTTCCAGAAA+AGG | + | chr7_3:83776954-83776973 | Msa1131230:CDS | 30.0% | |
| ! | TTTCTTAACAGCTTTTATGC+CGG | + | chr7_3:83776990-83777009 | Msa1131230:CDS | 30.0% |
| !! | AAATTTTGTAGGTGGATTCT+AGG | + | chr7_3:83777167-83777186 | Msa1131230:intron | 30.0% |
| !! | AATTTTGTAGGTGGATTCTA+GGG | + | chr7_3:83777168-83777187 | Msa1131230:intron | 30.0% |
| GAAAGAACATTAATTCAGTG+TGG | - | chr7_3:83777281-83777300 | None:intergenic | 30.0% | |
| TCGAGTACTTACATTAGAAA+AGG | - | chr7_3:83777401-83777420 | None:intergenic | 30.0% | |
| TTCTAATGTAAGTACTCGAT+AGG | + | chr7_3:83777402-83777421 | Msa1131230:intron | 30.0% | |
| TGACATGAGAAAGACATTAA+TGG | - | chr7_3:83777469-83777488 | None:intergenic | 30.0% | |
| GTCAATGGTGATATTTATTG+TGG | - | chr7_3:83777502-83777521 | None:intergenic | 30.0% | |
| TGAATTTCCATTTGTGTAGA+TGG | + | chr7_3:83777712-83777731 | Msa1131230:intron | 30.0% | |
| GTAAAAAAACCATGTCTCTA+GGG | - | chr7_3:83777798-83777817 | None:intergenic | 30.0% | |
| AGTAAAAAAACCATGTCTCT+AGG | - | chr7_3:83777799-83777818 | None:intergenic | 30.0% | |
| !!! | ACATGGTTTTTTTACTAGTG+AGG | + | chr7_3:83777803-83777822 | Msa1131230:intron | 30.0% |
| !!! | CATGGTTTTTTTACTAGTGA+GGG | + | chr7_3:83777804-83777823 | Msa1131230:intron | 30.0% |
| ! | AAATATTTACAGAGTGTCTC+AGG | + | chr7_3:83778021-83778040 | Msa1131230:intron | 30.0% |
| CAGGACACTTAAAAAGATAT+CGG | + | chr7_3:83778040-83778059 | Msa1131230:intron | 30.0% | |
| AGGACACTTAAAAAGATATC+GGG | + | chr7_3:83778041-83778060 | Msa1131230:intron | 30.0% | |
| ! | TATTTAGCATTTTTGTCGGT+GGG | + | chr7_3:83778096-83778115 | Msa1131230:intron | 30.0% |
| GAAGAACATGTAATAGACAA+GGG | - | chr7_3:83778146-83778165 | None:intergenic | 30.0% | |
| AGAAGAACATGTAATAGACA+AGG | - | chr7_3:83778147-83778166 | None:intergenic | 30.0% | |
| !! | GGGGGAAAAGTATATTTTAA+GGG | - | chr7_3:83778171-83778190 | None:intergenic | 30.0% |
| ! | TCGGTACCATTTTATTGTAA+AGG | - | chr7_3:83778240-83778259 | None:intergenic | 30.0% |
| AAAGCAAAACTTTCCAGTTT+CGG | - | chr7_3:83778259-83778278 | None:intergenic | 30.0% | |
| !! | TTGATACTTTTGGAAACGAT+AGG | - | chr7_3:83778373-83778392 | None:intergenic | 30.0% |
| ! | ATTCGTTCGAGTTTAAATTC+AGG | + | chr7_3:83778464-83778483 | Msa1131230:intron | 30.0% |
| GACCACAAATTCAAATTAAG+AGG | - | chr7_3:83778681-83778700 | None:intergenic | 30.0% | |
| GATTCTCTCAAACTTTACAT+GGG | - | chr7_3:83778744-83778763 | None:intergenic | 30.0% | |
| TGATTCTCTCAAACTTTACA+TGG | - | chr7_3:83778745-83778764 | None:intergenic | 30.0% | |
| TGCAGTTGACACAAATTAAA+AGG | - | chr7_3:83778863-83778882 | None:intergenic | 30.0% | |
| TGACTTGAATTCAAGTAAGT+AGG | - | chr7_3:83779006-83779025 | None:intergenic | 30.0% | |
| AATTGTCACATTTACACTTG+TGG | + | chr7_3:83779126-83779145 | Msa1131230:intron | 30.0% | |
| !!! | GAATTTTAAAACGACAAGCA+AGG | - | chr7_3:83779188-83779207 | None:intergenic | 30.0% |
| AGCTTATTGGACAAGAATTT+GGG | - | chr7_3:83779383-83779402 | None:intergenic | 30.0% | |
| TATAGTACTAGTATGAGACA+AGG | - | chr7_3:83779456-83779475 | None:intergenic | 30.0% | |
| CAAGATAACTTCTCTAAACA+GGG | + | chr7_3:83779636-83779655 | Msa1131230:CDS | 30.0% | |
| GAAATTTCAATGGAATTCCA+AGG | - | chr7_3:83779704-83779723 | None:intergenic | 30.0% | |
| TTCCATTGAAATTTCAACAC+TGG | + | chr7_3:83779709-83779728 | Msa1131230:CDS | 30.0% | |
| ! | ATCCAGTGTTGAAATTTCAA+TGG | - | chr7_3:83779714-83779733 | None:intergenic | 30.0% |
| TGATGTATATGAGATCAAAG+GGG | + | chr7_3:83779755-83779774 | Msa1131230:CDS | 30.0% | |
| AGAGAATTACATAGTTCTTG+TGG | - | chr7_3:83779807-83779826 | None:intergenic | 30.0% | |
| !! | ACATGCTGATTCCTTTATTT+CGG | - | chr7_3:83779906-83779925 | None:intergenic | 30.0% |
| TGTGAGAAACTTTATTGTAG+AGG | + | chr7_3:83779933-83779952 | Msa1131230:three_prime_UTR | 30.0% | |
| TGAACCATTGTTGAAGCTAA+TGG | + | chr7_3:83776861-83776880 | Msa1131230:CDS | 35.0% | |
| !! | CTTTTCATTTGGTGGAATTG+TGG | - | chr7_3:83776887-83776906 | None:intergenic | 35.0% |
| CACAATTCCACCAAATGAAA+AGG | + | chr7_3:83776885-83776904 | Msa1131230:CDS | 35.0% | |
| ! | AGAATCACCTTTTCATTTGG+TGG | - | chr7_3:83776895-83776914 | None:intergenic | 35.0% |
| AGCTGTTAAGAAAACACCAA+CGG | - | chr7_3:83776983-83777002 | None:intergenic | 35.0% | |
| ACACAATGCTTCTTATGTCA+TGG | + | chr7_3:83777020-83777039 | Msa1131230:CDS | 35.0% | |
| TGCTTCTTATGTCATGGAAA+AGG | + | chr7_3:83777026-83777045 | Msa1131230:CDS | 35.0% | |
| !! | AATCTAACGGTTAAGTTGAG+TGG | - | chr7_3:83777225-83777244 | None:intergenic | 35.0% |
| AAGACTTATGCGATCTCATT+AGG | + | chr7_3:83777249-83777268 | Msa1131230:intron | 35.0% | |
| ! | TCAGTGTTTCTGAGTATTCA+CGG | - | chr7_3:83777330-83777349 | None:intergenic | 35.0% |
| CATGAGAAAGACATTAATGG+AGG | - | chr7_3:83777466-83777485 | None:intergenic | 35.0% | |
| ATTTCACCATCGAAGCATAA+TGG | + | chr7_3:83777646-83777665 | Msa1131230:intron | 35.0% | |
| TTTCACCATCGAAGCATAAT+GGG | + | chr7_3:83777647-83777666 | Msa1131230:intron | 35.0% | |
| ! | TTTTTCCCATTATGCTTCGA+TGG | - | chr7_3:83777655-83777674 | None:intergenic | 35.0% |
| ! | GAAGCATAATGGGAAAAATC+TGG | + | chr7_3:83777657-83777676 | Msa1131230:intron | 35.0% |
| TTTAACACAGACAATGGTTG+TGG | + | chr7_3:83777761-83777780 | Msa1131230:intron | 35.0% | |
| TACAAAATTGGTGGAGTCTA+GGG | - | chr7_3:83777942-83777961 | None:intergenic | 35.0% | |
| ATACAAAATTGGTGGAGTCT+AGG | - | chr7_3:83777943-83777962 | None:intergenic | 35.0% | |
| GGACACTTAAAAAGATATCG+GGG | + | chr7_3:83778042-83778061 | Msa1131230:intron | 35.0% | |
| ! | CTATTTAGCATTTTTGTCGG+TGG | + | chr7_3:83778095-83778114 | Msa1131230:intron | 35.0% |
| !! | GGGGGGAAAAGTATATTTTA+AGG | - | chr7_3:83778172-83778191 | None:intergenic | 35.0% |
| ! | CAATAAAATGGTACCGAAAC+TGG | + | chr7_3:83778243-83778262 | Msa1131230:intron | 35.0% |
| TGTTGGATAGCGATAATTCA+AGG | - | chr7_3:83778285-83778304 | None:intergenic | 35.0% | |
| TGAAAGAAACTGATGCCTAA+AGG | - | chr7_3:83778331-83778350 | None:intergenic | 35.0% | |
| TTGGAAACGATAGGTAAGTA+GGG | - | chr7_3:83778364-83778383 | None:intergenic | 35.0% | |
| TTTGGAAACGATAGGTAAGT+AGG | - | chr7_3:83778365-83778384 | None:intergenic | 35.0% | |
| GAGATATCATACTCTCTACT+TGG | + | chr7_3:83778522-83778541 | Msa1131230:intron | 35.0% | |
| ATTGCAATCTTCATTGACGT+TGG | - | chr7_3:83778768-83778787 | None:intergenic | 35.0% | |
| ! | CATAGATGTGATTTGTGTTC+TGG | - | chr7_3:83778829-83778848 | None:intergenic | 35.0% |
| AGTAGGACTATTGAGGTTTA+TGG | - | chr7_3:83778989-83779008 | None:intergenic | 35.0% | |
| TCAAGTAAGTAGGACTATTG+AGG | - | chr7_3:83778996-83779015 | None:intergenic | 35.0% | |
| ACTGAAGAGATATGGAATTG+AGG | + | chr7_3:83779223-83779242 | Msa1131230:intron | 35.0% | |
| CTGAAGAGATATGGAATTGA+GGG | + | chr7_3:83779224-83779243 | Msa1131230:intron | 35.0% | |
| !!! | TTGATGTTTTGTTTCCACAC+TGG | - | chr7_3:83779349-83779368 | None:intergenic | 35.0% |
| GAGCTTATTGGACAAGAATT+TGG | - | chr7_3:83779384-83779403 | None:intergenic | 35.0% | |
| ACAAACTACTTGGATTTAGC+AGG | + | chr7_3:83779551-83779570 | Msa1131230:intron | 35.0% | |
| GATTTAGCAGGATCTTGAAT+TGG | + | chr7_3:83779563-83779582 | Msa1131230:intron | 35.0% | |
| AATTGGCCAAGACTTTATTG+AGG | + | chr7_3:83779580-83779599 | Msa1131230:CDS | 35.0% | |
| AGTCAAGTCTTCCATAAAGA+GGG | - | chr7_3:83779613-83779632 | None:intergenic | 35.0% | |
| GCAAGATAACTTCTCTAAAC+AGG | + | chr7_3:83779635-83779654 | Msa1131230:CDS | 35.0% | |
| AACTTCTCTAAACAGGGTTA+TGG | + | chr7_3:83779642-83779661 | Msa1131230:CDS | 35.0% | |
| ACTTCTCTAAACAGGGTTAT+GGG | + | chr7_3:83779643-83779662 | Msa1131230:CDS | 35.0% | |
| ! | TTGCAAACAATAAAAGCACG+TGG | - | chr7_3:83779675-83779694 | None:intergenic | 35.0% |
| ATTGTTTGCAATGAAGACCT+TGG | + | chr7_3:83779684-83779703 | Msa1131230:CDS | 35.0% | |
| ! | CATCATTAATCCCAGCATTT+TGG | - | chr7_3:83779740-83779759 | None:intergenic | 35.0% |
| GAGAAACTTTATTGTAGAGG+TGG | + | chr7_3:83779936-83779955 | Msa1131230:three_prime_UTR | 35.0% | |
| ! | TTTAGAATCTGCTGGTCATG+TGG | + | chr7_3:83776762-83776781 | Msa1131230:CDS | 40.0% |
| ACTTAGCATAGCTCTTGCAA+TGG | + | chr7_3:83776936-83776955 | Msa1131230:CDS | 40.0% | |
| !! | GAAGCATTGTGTTGAATGTC+CGG | - | chr7_3:83777012-83777031 | None:intergenic | 40.0% |
| CTTCAATATCAAGCACGCAA+TGG | - | chr7_3:83777613-83777632 | None:intergenic | 40.0% | |
| CGTGCTTGATATTGAAGATG+CGG | + | chr7_3:83777616-83777635 | Msa1131230:intron | 40.0% | |
| CACTCATCCATCTACACAAA+TGG | - | chr7_3:83777722-83777741 | None:intergenic | 40.0% | |
| TTACTAGTGAGGGAAGAAGA+TGG | + | chr7_3:83777814-83777833 | Msa1131230:intron | 40.0% | |
| TGGTTGTGATCCAATGTAGA+CGG | + | chr7_3:83777834-83777853 | Msa1131230:intron | 40.0% | |
| TTGTTGTACACCGTCTACAT+TGG | - | chr7_3:83777847-83777866 | None:intergenic | 40.0% | |
| GTGGAGTAACACACATTTGT+TGG | - | chr7_3:83778302-83778321 | None:intergenic | 40.0% | |
| TTACTCCACAGTTCACCTTT+AGG | + | chr7_3:83778313-83778332 | Msa1131230:intron | 40.0% | |
| !!! | ATGGTTTTTTCGAACCTTGC+AGG | - | chr7_3:83778970-83778989 | None:intergenic | 40.0% |
| !! | GGAGTGTTGATAGAGCTTAT+TGG | - | chr7_3:83779396-83779415 | None:intergenic | 40.0% |
| TTAACGTGTAGTTACCTCAG+TGG | - | chr7_3:83779420-83779439 | None:intergenic | 40.0% | |
| GAGTCAAGTCTTCCATAAAG+AGG | - | chr7_3:83779614-83779633 | None:intergenic | 40.0% | |
| ACTGGATGATCCAAAATGCT+GGG | + | chr7_3:83779727-83779746 | Msa1131230:CDS | 40.0% | |
| ! | AAGCCACGTTTAGAATCTGC+TGG | + | chr7_3:83776754-83776773 | Msa1131230:CDS | 45.0% |
| TGACCAGCAGATTCTAAACG+TGG | - | chr7_3:83776760-83776779 | None:intergenic | 45.0% | |
| GTTCTTGACCTTTCAGCTTC+TGG | + | chr7_3:83776790-83776809 | Msa1131230:CDS | 45.0% | |
| ! | AGTTGGTTCCAGAAGCTGAA+AGG | - | chr7_3:83776801-83776820 | None:intergenic | 45.0% |
| ! | GTGGCCATTAGCTTCAACAA+TGG | - | chr7_3:83776868-83776887 | None:intergenic | 45.0% |
| ATTCTTGTGGGTCACAGTCT+TGG | + | chr7_3:83776910-83776929 | Msa1131230:CDS | 45.0% | |
| TTTCCAGAAAAGGTTGCCGT+TGG | + | chr7_3:83776964-83776983 | Msa1131230:CDS | 45.0% | |
| ! | GTGTTTCTGAGTATTCACGG+TGG | - | chr7_3:83777327-83777346 | None:intergenic | 45.0% |
| ATAACCTGACCCTAGAGACA+TGG | + | chr7_3:83777786-83777805 | Msa1131230:intron | 45.0% | |
| !! | AAAACCATGTCTCTAGGGTC+AGG | - | chr7_3:83777793-83777812 | None:intergenic | 45.0% |
| !! | AGCATTTTTGTCGGTGGGTT+AGG | + | chr7_3:83778101-83778120 | Msa1131230:intron | 45.0% |
| TGATGCCTAAAGGTGAACTG+TGG | - | chr7_3:83778321-83778340 | None:intergenic | 45.0% | |
| !! | GTATATTGAGAGTACCCCGA+CGG | + | chr7_3:83779298-83779317 | Msa1131230:intron | 45.0% |
| CCAAGACTTTATTGAGGCCA+GGG | + | chr7_3:83779586-83779605 | Msa1131230:CDS | 45.0% | |
| CACTGGATGATCCAAAATGC+TGG | + | chr7_3:83779726-83779745 | Msa1131230:CDS | 45.0% | |
| GATCAAAGGGGCAGATCATA+TGG | + | chr7_3:83779767-83779786 | Msa1131230:CDS | 45.0% | |
| !!! | AAATTATTCTTTAAAAAAAT+CGG | - | chr7_3:83777992-83778011 | None:intergenic | 5.0% |
| !!! | TAAATTTTGTTATAAAAAAA+TGG | - | chr7_3:83778703-83778722 | None:intergenic | 5.0% |
| CTTGTACATGGTGCTTGCCA+TGG | + | chr7_3:83776709-83776728 | Msa1131230:CDS | 50.0% | |
| TGTACCAACTCCAAGCACCA+TGG | - | chr7_3:83776729-83776748 | None:intergenic | 50.0% | |
| !! | TGGTGCTTGGAGTTGGTACA+AGG | + | chr7_3:83776729-83776748 | Msa1131230:CDS | 50.0% |
| ! | ACACCAACGGCAACCTTTTC+TGG | - | chr7_3:83776970-83776989 | None:intergenic | 50.0% |
| !! | TGTAGGTGGATTCTAGGGTG+AGG | + | chr7_3:83777173-83777192 | Msa1131230:intron | 50.0% |
| !! | GTAGGTGGATTCTAGGGTGA+GGG | + | chr7_3:83777174-83777193 | Msa1131230:intron | 50.0% |
| GGCTCTATTAAGTCCCTCAC+CGG | + | chr7_3:83777195-83777214 | Msa1131230:intron | 50.0% | |
| TCTATTAAGTCCCTCACCGG+TGG | + | chr7_3:83777198-83777217 | Msa1131230:intron | 50.0% | |
| !! | GGTTAAGTTGAGTGGTCCAC+CGG | - | chr7_3:83777217-83777236 | None:intergenic | 50.0% |
| GCCTCTTAATAGTGCTCCAC+CGG | + | chr7_3:83777893-83777912 | Msa1131230:intron | 50.0% | |
| ! | ACCGGTGGAGCACTATTAAG+AGG | - | chr7_3:83777897-83777916 | None:intergenic | 50.0% |
| TTAATAGTGCTCCACCGGTG+AGG | + | chr7_3:83777898-83777917 | Msa1131230:intron | 50.0% | |
| TAATAGTGCTCCACCGGTGA+GGG | + | chr7_3:83777899-83777918 | Msa1131230:intron | 50.0% | |
| GGTCCAATTAAGTCCCTCAC+CGG | - | chr7_3:83777915-83777934 | None:intergenic | 50.0% | |
| ! | ATTGGTGGAGTCTAGGGTGA+GGG | - | chr7_3:83777936-83777955 | None:intergenic | 50.0% |
| ! | AATTGGTGGAGTCTAGGGTG+AGG | - | chr7_3:83777937-83777956 | None:intergenic | 50.0% |
| GGAGAAACACATCTCCTGCA+AGG | + | chr7_3:83778953-83778972 | Msa1131230:intron | 50.0% | |
| GACACTGAATTCTGCCAGTG+TGG | + | chr7_3:83779332-83779351 | Msa1131230:CDS | 50.0% | |
| CTATCAACACTCCTCCACTG+AGG | + | chr7_3:83779403-83779422 | Msa1131230:CDS | 50.0% | |
| ACGTGTAGTTACCTCAGTGG+AGG | - | chr7_3:83779417-83779436 | None:intergenic | 50.0% | |
| GCCAAGACTTTATTGAGGCC+AGG | + | chr7_3:83779585-83779604 | Msa1131230:CDS | 50.0% | |
| CCCTGGCCTCAATAAAGTCT+TGG | - | chr7_3:83779589-83779608 | None:intergenic | 50.0% | |
| TCTTCCATAAAGAGGGACCC+TGG | - | chr7_3:83779606-83779625 | None:intergenic | 50.0% | |
| ATGGTGCTTGCCATGGTGCT+TGG | + | chr7_3:83776716-83776735 | Msa1131230:CDS | 55.0% | |
| CTTGCCATGGTGCTTGGAGT+TGG | + | chr7_3:83776722-83776741 | Msa1131230:CDS | 55.0% | |
| CTTGTGGGTCACAGTCTTGG+AGG | + | chr7_3:83776913-83776932 | Msa1131230:CDS | 55.0% | |
| CACGGTGGAGAGAGTGAGAT+TGG | - | chr7_3:83777312-83777331 | None:intergenic | 55.0% | |
| CCAATTAAGTCCCTCACCGG+TGG | - | chr7_3:83777912-83777931 | None:intergenic | 55.0% | |
| CCACCGGTGAGGGACTTAAT+TGG | + | chr7_3:83777909-83777928 | Msa1131230:intron | 55.0% | |
| TGTCCAACCATTCAGCCGTC+GGG | - | chr7_3:83779316-83779335 | None:intergenic | 55.0% | |
| GTGTCCAACCATTCAGCCGT+CGG | - | chr7_3:83779317-83779336 | None:intergenic | 55.0% | |
| GTTGAGTGGTCCACCGGTGA+GGG | - | chr7_3:83777211-83777230 | None:intergenic | 60.0% | |
| AGTTGAGTGGTCCACCGGTG+AGG | - | chr7_3:83777212-83777231 | None:intergenic | 60.0% | |
| ! | AGAGTACCCCGACGGCTGAA+TGG | + | chr7_3:83779306-83779325 | Msa1131230:CDS | 60.0% |
| TACCCCGACGGCTGAATGGT+TGG | + | chr7_3:83779310-83779329 | Msa1131230:CDS | 60.0% | |
| GTCCAACCATTCAGCCGTCG+GGG | - | chr7_3:83779315-83779334 | None:intergenic | 60.0% | |
| GAGGCCAGGGTCCCTCTTTA+TGG | + | chr7_3:83779599-83779618 | Msa1131230:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 83776626 | 83779990 | 83776626 | ID=Msa1131230;Name=Msa1131230 |
| chr7_3 | mRNA | 83776626 | 83779990 | 83776626 | ID=Msa1131230-mRNA-1;Parent=Msa1131230;Name=Msa1131230-mRNA-1;_AED=0.04;_eAED=0.04;_QI=44|1|1|1|1|1|3|136|261 |
| chr7_3 | exon | 83776626 | 83777047 | 83776626 | ID=Msa1131230-mRNA-1:exon:24834;Parent=Msa1131230-mRNA-1 |
| chr7_3 | exon | 83779299 | 83779424 | 83779299 | ID=Msa1131230-mRNA-1:exon:24835;Parent=Msa1131230-mRNA-1 |
| chr7_3 | exon | 83779573 | 83779990 | 83779573 | ID=Msa1131230-mRNA-1:exon:24836;Parent=Msa1131230-mRNA-1 |
| chr7_3 | five_prime_UTR | 83776626 | 83776669 | 83776626 | ID=Msa1131230-mRNA-1:five_prime_utr;Parent=Msa1131230-mRNA-1 |
| chr7_3 | CDS | 83776670 | 83777047 | 83776670 | ID=Msa1131230-mRNA-1:cds;Parent=Msa1131230-mRNA-1 |
| chr7_3 | CDS | 83779299 | 83779424 | 83779299 | ID=Msa1131230-mRNA-1:cds;Parent=Msa1131230-mRNA-1 |
| chr7_3 | CDS | 83779573 | 83779854 | 83779573 | ID=Msa1131230-mRNA-1:cds;Parent=Msa1131230-mRNA-1 |
| chr7_3 | three_prime_UTR | 83779855 | 83779990 | 83779855 | ID=Msa1131230-mRNA-1:three_prime_utr;Parent=Msa1131230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
