Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203480 | sp|Q6RYA0|SABP2_TOBAC | 59.608 | 255 | 99 | 1 | 10 | 260 | 5 | 259 | 7.90e-114 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203480 | A0A396GUA0 | 95.769 | 260 | 11 | 0 | 1 | 260 | 43 | 302 | 0.0 | 526 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0082420 | Msa1203480 | 0.813382 | 2.633450e-51 | -8.615850e-47 |
| Msa0090510 | Msa1203480 | 0.803048 | 4.197283e-49 | -8.615850e-47 |
| Msa0641130 | Msa1203480 | 0.814191 | 1.747208e-51 | -8.615850e-47 |
| Msa0164910 | Msa1203480 | 0.805947 | 1.043685e-49 | -8.615850e-47 |
| Msa0213540 | Msa1203480 | 0.827174 | 1.810207e-54 | -8.615850e-47 |
| Msa1013070 | Msa1203480 | 0.810690 | 1.016983e-50 | -8.615850e-47 |
| Msa1062040 | Msa1203480 | 0.812328 | 4.481668e-51 | -8.615850e-47 |
| Msa1094280 | Msa1203480 | 0.827830 | 1.259252e-54 | -8.615850e-47 |
| Msa0331020 | Msa1203480 | 0.840724 | 7.317542e-58 | -8.615850e-47 |
| Msa1131230 | Msa1203480 | 0.958109 | 5.298179e-116 | -8.615850e-47 |
| Msa1203480 | Msa1239620 | 0.809483 | 1.850539e-50 | -8.615850e-47 |
| Msa1203480 | Msa1267480 | 0.999037 | 4.123087e-287 | -8.615850e-47 |
| Msa1203480 | Msa1267510 | 0.999300 | 1.153092e-301 | -8.615850e-47 |
| Msa1203480 | Msa1305180 | 0.963454 | 4.185899e-122 | -8.615850e-47 |
| Msa1203480 | Msa1305330 | 0.965376 | 1.593051e-124 | -8.615850e-47 |
| Msa0545050 | Msa1203480 | 0.815888 | 7.338945e-52 | -8.615850e-47 |
| Msa0600590 | Msa1203480 | 0.811021 | 8.624079e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203480 | MtrunA17_Chr8g0374141 | 95.769 | 260 | 11 | 0 | 1 | 260 | 43 | 302 | 0.0 | 526 |
| Msa1203480 | MtrunA17_Chr5g0402901 | 62.302 | 252 | 95 | 0 | 9 | 260 | 10 | 261 | 2.11e-116 | 334 |
| Msa1203480 | MtrunA17_Chr5g0402881 | 57.854 | 261 | 109 | 1 | 1 | 260 | 18 | 278 | 9.10e-109 | 315 |
| Msa1203480 | MtrunA17_Chr5g0402851 | 42.912 | 261 | 144 | 2 | 5 | 260 | 2 | 262 | 1.54e-73 | 225 |
| Msa1203480 | MtrunA17_Chr5g0402871 | 45.525 | 257 | 131 | 4 | 11 | 260 | 5 | 259 | 7.18e-73 | 223 |
| Msa1203480 | MtrunA17_Chr8g0336391 | 43.191 | 257 | 137 | 5 | 11 | 260 | 27 | 281 | 1.25e-68 | 213 |
| Msa1203480 | MtrunA17_Chr3g0104871 | 41.634 | 257 | 140 | 4 | 10 | 260 | 18 | 270 | 2.93e-66 | 207 |
| Msa1203480 | MtrunA17_Chr5g0402841 | 40.856 | 257 | 146 | 3 | 9 | 260 | 6 | 261 | 3.00e-65 | 204 |
| Msa1203480 | MtrunA17_Chr8g0336441 | 42.023 | 257 | 139 | 5 | 10 | 260 | 26 | 278 | 5.60e-63 | 199 |
| Msa1203480 | MtrunA17_Chr8g0336411 | 41.699 | 259 | 139 | 5 | 10 | 260 | 27 | 281 | 6.28e-62 | 196 |
| Msa1203480 | MtrunA17_Chr8g0336381 | 40.385 | 260 | 145 | 5 | 9 | 260 | 5 | 262 | 2.94e-60 | 191 |
| Msa1203480 | MtrunA17_Chr8g0336401 | 38.996 | 259 | 150 | 5 | 10 | 260 | 26 | 284 | 7.49e-59 | 188 |
| Msa1203480 | MtrunA17_Chr7g0219561 | 33.730 | 252 | 158 | 3 | 11 | 257 | 124 | 371 | 2.58e-37 | 135 |
| Msa1203480 | MtrunA17_Chr3g0077351 | 33.077 | 260 | 158 | 5 | 7 | 257 | 90 | 342 | 1.60e-36 | 132 |
| Msa1203480 | MtrunA17_Chr3g0128581 | 32.927 | 246 | 153 | 5 | 7 | 246 | 32 | 271 | 3.79e-34 | 124 |
| Msa1203480 | MtrunA17_Chr5g0428471 | 31.395 | 258 | 166 | 4 | 9 | 260 | 28 | 280 | 3.80e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203480 | AT2G23620.1 | 54.086 | 257 | 114 | 2 | 9 | 261 | 7 | 263 | 3.05e-102 | 298 |
| Msa1203480 | AT2G23610.1 | 52.734 | 256 | 117 | 3 | 9 | 260 | 7 | 262 | 4.58e-94 | 278 |
| Msa1203480 | AT2G23600.1 | 52.964 | 253 | 115 | 2 | 9 | 257 | 7 | 259 | 5.34e-94 | 277 |
| Msa1203480 | AT2G23600.2 | 52.964 | 253 | 115 | 2 | 9 | 257 | 22 | 274 | 5.79e-94 | 278 |
| Msa1203480 | AT2G23590.1 | 47.638 | 254 | 128 | 1 | 7 | 260 | 23 | 271 | 1.23e-88 | 264 |
| Msa1203480 | AT4G37150.1 | 48.627 | 255 | 126 | 2 | 10 | 260 | 2 | 255 | 6.40e-88 | 262 |
| Msa1203480 | AT2G23580.1 | 49.805 | 257 | 124 | 2 | 9 | 260 | 6 | 262 | 1.04e-87 | 261 |
| Msa1203480 | AT5G10300.1 | 49.027 | 257 | 125 | 2 | 9 | 261 | 4 | 258 | 9.07e-87 | 259 |
| Msa1203480 | AT2G23550.1 | 48.638 | 257 | 127 | 2 | 9 | 260 | 6 | 262 | 1.38e-83 | 251 |
| Msa1203480 | AT2G23550.4 | 48.638 | 257 | 127 | 2 | 9 | 260 | 13 | 269 | 1.67e-83 | 251 |
| Msa1203480 | AT2G23560.1 | 46.063 | 254 | 135 | 2 | 9 | 260 | 6 | 259 | 6.62e-80 | 241 |
| Msa1203480 | AT2G23610.2 | 46.640 | 253 | 92 | 2 | 9 | 260 | 7 | 217 | 1.13e-77 | 234 |
| Msa1203480 | AT3G50440.1 | 43.478 | 253 | 139 | 2 | 12 | 260 | 22 | 274 | 1.08e-72 | 224 |
| Msa1203480 | AT2G23550.2 | 45.312 | 256 | 108 | 2 | 9 | 260 | 6 | 233 | 8.81e-70 | 215 |
| Msa1203480 | AT2G23600.3 | 52.439 | 164 | 74 | 2 | 9 | 168 | 22 | 185 | 7.38e-59 | 185 |
| Msa1203480 | AT2G23570.1 | 48.315 | 178 | 88 | 1 | 87 | 260 | 1 | 178 | 6.79e-53 | 170 |
| Msa1203480 | AT2G23580.2 | 48.045 | 179 | 85 | 3 | 9 | 182 | 6 | 181 | 9.62e-53 | 170 |
| Msa1203480 | AT2G23550.3 | 47.273 | 165 | 82 | 2 | 9 | 168 | 13 | 177 | 3.28e-50 | 164 |
| Msa1203480 | AT5G10300.2 | 47.590 | 166 | 81 | 2 | 9 | 170 | 4 | 167 | 2.05e-47 | 157 |
| Msa1203480 | AT4G37140.1 | 53.846 | 117 | 54 | 0 | 10 | 126 | 2 | 118 | 3.09e-45 | 149 |
| Msa1203480 | AT4G09900.1 | 33.074 | 257 | 156 | 5 | 10 | 257 | 97 | 346 | 1.84e-39 | 140 |
| Msa1203480 | AT1G26360.1 | 32.669 | 251 | 164 | 2 | 10 | 257 | 188 | 436 | 4.38e-39 | 141 |
| Msa1203480 | AT1G33990.1 | 32.443 | 262 | 164 | 5 | 3 | 257 | 90 | 345 | 5.01e-39 | 139 |
| Msa1203480 | AT3G29770.1 | 35.294 | 255 | 150 | 5 | 11 | 257 | 138 | 385 | 1.65e-37 | 136 |
| Msa1203480 | AT5G58310.1 | 32.700 | 263 | 160 | 5 | 7 | 257 | 1 | 258 | 2.58e-37 | 132 |
| Msa1203480 | AT4G37140.2 | 58.242 | 91 | 38 | 0 | 10 | 100 | 2 | 92 | 4.44e-37 | 127 |
| Msa1203480 | AT1G69240.1 | 31.518 | 257 | 161 | 6 | 10 | 257 | 186 | 436 | 1.73e-36 | 134 |
| Msa1203480 | AT4G16690.1 | 31.707 | 246 | 153 | 4 | 11 | 249 | 12 | 249 | 3.33e-33 | 122 |
| Msa1203480 | AT3G10870.1 | 30.738 | 244 | 157 | 5 | 11 | 246 | 20 | 259 | 9.26e-31 | 115 |
| Msa1203480 | AT3G29770.2 | 40.278 | 72 | 43 | 0 | 11 | 82 | 138 | 209 | 2.86e-12 | 65.5 |
Find 70 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCATTAATCCCAGCATTT+TGG | 0.157812 | 8_1:+57736610 | None:intergenic |
| GAGCTTATTGGACAAGAATT+TGG | 0.162838 | 8_1:+57736966 | None:intergenic |
| GAGGCCAGGGTCCCTCTTTA+TGG | 0.202954 | 8_1:-57736748 | Msa1203480:CDS |
| ATTCTTGACCTTTCAGCTTC+TGG | 0.238179 | 8_1:-57739555 | Msa1203480:CDS |
| AACAAAACATCAATGTTCTT+TGG | 0.296879 | 8_1:-57736991 | Msa1203480:CDS |
| GCAAGATAACTTCTCTAAAC+AGG | 0.300900 | 8_1:-57736712 | Msa1203480:CDS |
| ACATGCTGATTCCTTTATTT+CGG | 0.312733 | 8_1:+57736444 | None:intergenic |
| TGAAGTTTAGCTTAATTTGT+TGG | 0.339405 | 8_1:-57736487 | Msa1203480:three_prime_UTR |
| AGCTTATTGGACAAGAATTT+GGG | 0.339872 | 8_1:+57736967 | None:intergenic |
| AACTTCTCTAAACAGGGTTA+TGG | 0.360676 | 8_1:-57736705 | Msa1203480:CDS |
| GGAGTGTTGATAGAGCTTAT+TGG | 0.392660 | 8_1:+57736954 | None:intergenic |
| ACTTCTCTAAACAGGGTTAT+GGG | 0.399672 | 8_1:-57736704 | Msa1203480:CDS |
| AATGGAACAATTTCCAGAAA+AGG | 0.417631 | 8_1:-57739391 | Msa1203480:CDS |
| ATTCTTGTGGGTCATAGTCT+TGG | 0.418009 | 8_1:-57739435 | Msa1203480:CDS |
| ATCCAGTGTTGAAATTTCAA+TGG | 0.421026 | 8_1:+57736636 | None:intergenic |
| GATTTAGCAGGATCTTGAAT+TGG | 0.423617 | 8_1:-57736784 | Msa1203480:intron |
| TGAACCATTGTTGAAGCTAA+TGG | 0.426644 | 8_1:-57739484 | Msa1203480:CDS |
| ATCTTCAAGTTTCTTCAAGT+TGG | 0.431463 | 8_1:+57739530 | None:intergenic |
| GTGCACAAAATTTAATTGCT+AGG | 0.449601 | 8_1:-57739671 | Msa1203480:CDS |
| TGCTTCTTATGTCATGGAAA+AGG | 0.451368 | 8_1:-57739319 | Msa1203480:intron |
| CACTGGATGATCCAAAATGC+TGG | 0.456893 | 8_1:-57736621 | Msa1203480:CDS |
| GATCAAAGGGGCAGATCATA+TGG | 0.460208 | 8_1:-57736580 | Msa1203480:CDS |
| TGTCCAACCATTCAGCCGTC+GGG | 0.460887 | 8_1:+57737034 | None:intergenic |
| ATGATGTATATGAGATCAAA+GGG | 0.461047 | 8_1:-57736593 | Msa1203480:CDS |
| CTTGTGGGTCATAGTCTTGG+AGG | 0.464347 | 8_1:-57739432 | Msa1203480:CDS |
| ATGGTGCTTGCCATGGTGCT+TGG | 0.470545 | 8_1:-57739629 | Msa1203480:CDS |
| TTCCATTGAAATTTCAACAC+TGG | 0.470781 | 8_1:-57736638 | Msa1203480:CDS |
| GCCAAGACTTTATTGAGGCC+AGG | 0.472046 | 8_1:-57736762 | Msa1203480:CDS |
| CACAATTCCACCAAATGAAA+AGG | 0.475812 | 8_1:-57739460 | Msa1203480:CDS |
| CTTGCCATGGTGCTTGGAGT+TGG | 0.476673 | 8_1:-57739623 | Msa1203480:CDS |
| GAAGCATTGTGTTGAATGTC+CGG | 0.482394 | 8_1:+57739336 | None:intergenic |
| CCCTGGCCTCAATAAAGTCT+TGG | 0.486588 | 8_1:+57736761 | None:intergenic |
| ACACAATGCTTCTTATGTCA+TGG | 0.491092 | 8_1:-57739325 | Msa1203480:CDS |
| AATGAAAAGGTGATTCTTGT+GGG | 0.497441 | 8_1:-57739447 | Msa1203480:CDS |
| CTTGTACATGGTGCTTGCCA+TGG | 0.498303 | 8_1:-57739636 | Msa1203480:CDS |
| CATAATGATTATTGTTGTTG+TGG | 0.503508 | 8_1:+57739695 | None:intergenic |
| TACCCCGACGGCTGAATGGT+TGG | 0.505808 | 8_1:-57737037 | Msa1203480:CDS |
| AGAGTACCCCGACGGCTGAA+TGG | 0.512702 | 8_1:-57737041 | Msa1203480:CDS |
| ATTGTTTGCAATGAAGACCT+TGG | 0.520269 | 8_1:-57736663 | Msa1203480:CDS |
| AGAGAATTACATAGTTCTTG+TGG | 0.522605 | 8_1:+57736543 | None:intergenic |
| CCAAGACTTTATTGAGGCCA+GGG | 0.522924 | 8_1:-57736761 | Msa1203480:CDS |
| GAAATTTCAATGGAATTCCA+AGG | 0.525367 | 8_1:+57736646 | None:intergenic |
| GTGTCCAACCATTCAGCCGT+CGG | 0.529692 | 8_1:+57737033 | None:intergenic |
| AAGCATTATGTTCTTGTACA+TGG | 0.531450 | 8_1:-57739648 | Msa1203480:CDS |
| TTTCCAGAAAAGGTTGCTGT+TGG | 0.543459 | 8_1:-57739381 | Msa1203480:CDS |
| AATGATGTATATGAGATCAA+AGG | 0.543714 | 8_1:-57736594 | Msa1203480:CDS |
| GAGAAACTTTATTGTAGAGG+TGG | 0.543747 | 8_1:-57736411 | Msa1203480:three_prime_UTR |
| AAATGAAAAGGTGATTCTTG+TGG | 0.544198 | 8_1:-57739448 | Msa1203480:CDS |
| AATTGGCCAAGACTTTATTG+AGG | 0.557607 | 8_1:-57736767 | Msa1203480:CDS |
| TGTGAGAAACTTTATTGTAG+AGG | 0.558702 | 8_1:-57736414 | Msa1203480:three_prime_UTR |
| TGGTGCTTGGAGTTGGTACA+AGG | 0.561033 | 8_1:-57739616 | Msa1203480:CDS |
| GTGGCCATTAGCTTCAACAA+TGG | 0.573860 | 8_1:+57739480 | None:intergenic |
| GAGTCAAGTCTTCCATAAAG+AGG | 0.579389 | 8_1:+57736736 | None:intergenic |
| AGTTGGTTCCAGAAGCTGAA+AGG | 0.584796 | 8_1:+57739547 | None:intergenic |
| AAGCCACGTTTAGAATCTGC+TGG | 0.586149 | 8_1:-57739591 | Msa1203480:CDS |
| ACTGGATGATCCAAAATGCT+GGG | 0.589459 | 8_1:-57736620 | Msa1203480:CDS |
| CAAGATAACTTCTCTAAACA+GGG | 0.605122 | 8_1:-57736711 | Msa1203480:CDS |
| ACTTAGCATAGCTCTTGCAA+TGG | 0.605259 | 8_1:-57739409 | Msa1203480:CDS |
| AGTCAAGTCTTCCATAAAGA+GGG | 0.612508 | 8_1:+57736737 | None:intergenic |
| TTTAGAATCTGCTGGTCATG+TGG | 0.623515 | 8_1:-57739583 | Msa1203480:CDS |
| GACACTGAATTCTGCCAGTG+TGG | 0.627184 | 8_1:-57737015 | Msa1203480:CDS |
| TCTTCCATAAAGAGGGACCC+TGG | 0.632528 | 8_1:+57736744 | None:intergenic |
| GTCCAACCATTCAGCCGTCG+GGG | 0.648788 | 8_1:+57737035 | None:intergenic |
| ACGTGTAGTTACCTCAGTGG+AGG | 0.650895 | 8_1:+57736933 | None:intergenic |
| TTAACGTGTAGTTACCTCAG+TGG | 0.666283 | 8_1:+57736930 | None:intergenic |
| TTGCAAACAATAAAAGCACG+TGG | 0.692906 | 8_1:+57736675 | None:intergenic |
| TGTACCAACTCCAAGCACCA+TGG | 0.696634 | 8_1:+57739619 | None:intergenic |
| TGACCAGCAGATTCTAAACG+TGG | 0.719220 | 8_1:+57739588 | None:intergenic |
| TGATGTATATGAGATCAAAG+GGG | 0.769291 | 8_1:-57736592 | Msa1203480:CDS |
| CTATCAACACTCCTCCACTG+AGG | 0.776664 | 8_1:-57736944 | Msa1203480:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAAAACATAAAAAG+GGG | + | chr8_1:57737942-57737961 | None:intergenic | 10.0% |
| !! | CATATAATAAAACATAAAAA+GGG | + | chr8_1:57737943-57737962 | None:intergenic | 10.0% |
| !! | ACATATAATAAAACATAAAA+AGG | + | chr8_1:57737944-57737963 | None:intergenic | 10.0% |
| !!! | AAATACATTTTATTCATTTA+TGG | + | chr8_1:57738305-57738324 | None:intergenic | 10.0% |
| !!! | CATAATAAGTAATTTTTATT+TGG | + | chr8_1:57738389-57738408 | None:intergenic | 10.0% |
| !! | TTTATAACAAAATTTAGATT+AGG | - | chr8_1:57738458-57738477 | Msa1203480:intron | 10.0% |
| !! | TTATAACAAAATTTAGATTA+GGG | - | chr8_1:57738459-57738478 | Msa1203480:intron | 10.0% |
| !! | ACAAAAAATAAGATTAATAA+TGG | + | chr8_1:57739015-57739034 | None:intergenic | 10.0% |
| !!! | TAGTTTTTATGAAATTTTGT+AGG | - | chr8_1:57736907-57736926 | Msa1203480:intron | 15.0% |
| !! | GAAAATAAATTAAAAAGTTG+TGG | + | chr8_1:57737123-57737142 | None:intergenic | 15.0% |
| !! | TTACTTCAGAAAATAATATA+AGG | + | chr8_1:57737318-57737337 | None:intergenic | 15.0% |
| !!! | GAATTTGTAAAATTTTGTTA+TGG | - | chr8_1:57737430-57737449 | Msa1203480:intron | 15.0% |
| !! | ATACATTTAGTATACAAAAT+TGG | + | chr8_1:57737705-57737724 | None:intergenic | 15.0% |
| !! | TATAATAAAACATAAAAAGG+GGG | + | chr8_1:57737941-57737960 | None:intergenic | 15.0% |
| !! | CCTATATTTATAAAAACAAA+TGG | + | chr8_1:57738646-57738665 | None:intergenic | 15.0% |
| !!! | CCATTTGTTTTTATAAATAT+AGG | - | chr8_1:57738643-57738662 | Msa1203480:intron | 15.0% |
| !! | TCACAAATATGATTTCTATA+TGG | - | chr8_1:57736863-57736882 | Msa1203480:intron | 20.0% |
| !!! | TTTTTATGAAATTTTGTAGG+TGG | - | chr8_1:57736910-57736929 | Msa1203480:intron | 20.0% |
| !!! | ATGAGTCTTATTTAATCTAA+CGG | + | chr8_1:57736989-57737008 | None:intergenic | 20.0% |
| !!! | TTTCCATTTTTTTTTGTCAA+TGG | + | chr8_1:57737268-57737287 | None:intergenic | 20.0% |
| !!! | TGGAAAATTTGAGTTATAAA+AGG | + | chr8_1:57737344-57737363 | None:intergenic | 20.0% |
| !! | AAAATGCTAAATAGTTAGAT+CGG | + | chr8_1:57737840-57737859 | None:intergenic | 20.0% |
| !!! | TAACTATTTAGCATTTTTGT+CGG | - | chr8_1:57737843-57737862 | Msa1203480:intron | 20.0% |
| !! | ATAATAAAACATAAAAAGGG+GGG | + | chr8_1:57737940-57737959 | None:intergenic | 20.0% |
| !! | ATTTGTCCTTTACAATAAAA+TGG | - | chr8_1:57737982-57738001 | Msa1203480:intron | 20.0% |
| !!! | AGTTAAATTCTTGATACTTT+TGG | + | chr8_1:57738134-57738153 | None:intergenic | 20.0% |
| !! | TGACAATTAAAAAGTAATGA+AGG | + | chr8_1:57738865-57738884 | None:intergenic | 20.0% |
| !!! | AATTTTAAAACGACAAGTAA+GGG | + | chr8_1:57738938-57738957 | None:intergenic | 20.0% |
| !! | CATTAATTATTGAAGAGATA+TGG | - | chr8_1:57738966-57738985 | Msa1203480:intron | 20.0% |
| !! | TTGAAGTTTCCATTAAAAAA+TGG | - | chr8_1:57739253-57739272 | Msa1203480:intron | 20.0% |
| !!! | AATTGTACTCCATTTTTTAA+TGG | + | chr8_1:57739265-57739284 | None:intergenic | 20.0% |
| !! | CATAATGATTATTGTTGTTG+TGG | + | chr8_1:57736406-57736425 | None:intergenic | 25.0% |
| ! | TCAATGGTGATATTTATTGT+GGG | + | chr8_1:57737252-57737271 | None:intergenic | 25.0% |
| ! | TCACCATTGACAAAAAAAAA+TGG | - | chr8_1:57737262-57737281 | Msa1203480:intron | 25.0% |
| !!! | AAAATTTTGTTATGGAACGA+AGG | - | chr8_1:57737438-57737457 | Msa1203480:intron | 25.0% |
| ! | CATTTAGTATACAAAATTGG+TGG | + | chr8_1:57737702-57737721 | None:intergenic | 25.0% |
| ! | GAAGAACATGTAATAGAAAA+GGG | + | chr8_1:57737897-57737916 | None:intergenic | 25.0% |
| ! | AGAAGAACATGTAATAGAAA+AGG | + | chr8_1:57737898-57737917 | None:intergenic | 25.0% |
| !! | TTCCTCTTAATTTGAATTTG+TGG | - | chr8_1:57738427-57738446 | Msa1203480:intron | 25.0% |
| ! | ATATAAAACGACAAGTAAGT+AGG | + | chr8_1:57738801-57738820 | None:intergenic | 25.0% |
| !! | TCTAAGACAATTAAGTAAAC+TGG | + | chr8_1:57738904-57738923 | None:intergenic | 25.0% |
| !!! | GAATTTTAAAACGACAAGTA+AGG | + | chr8_1:57738939-57738958 | None:intergenic | 25.0% |
| ! | AACAAAACATCAATGTTCTT+TGG | - | chr8_1:57739107-57739126 | Msa1203480:intron | 25.0% |
| ! | ACTAATAAAGACAAACTACT+TGG | - | chr8_1:57739292-57739311 | Msa1203480:intron | 25.0% |
| ! | AATGATGTATATGAGATCAA+AGG | - | chr8_1:57739504-57739523 | Msa1203480:CDS | 25.0% |
| ! | ATGATGTATATGAGATCAAA+GGG | - | chr8_1:57739505-57739524 | Msa1203480:CDS | 25.0% |
| !!! | TGAAGTTTAGCTTAATTTGT+TGG | - | chr8_1:57739611-57739630 | Msa1203480:CDS | 25.0% |
| !!! | TTACTTTTTGTCCGAAATAA+AGG | - | chr8_1:57739643-57739662 | Msa1203480:CDS | 25.0% |
| GTGCACAAAATTTAATTGCT+AGG | - | chr8_1:57736427-57736446 | Msa1203480:three_prime_UTR | 30.0% | |
| AAGCATTATGTTCTTGTACA+TGG | - | chr8_1:57736450-57736469 | Msa1203480:three_prime_UTR | 30.0% | |
| ! | ATCTTCAAGTTTCTTCAAGT+TGG | + | chr8_1:57736571-57736590 | None:intergenic | 30.0% |
| ! | ACAAGAATCACCTTTTCATT+TGG | + | chr8_1:57736651-57736670 | None:intergenic | 30.0% |
| AAATGAAAAGGTGATTCTTG+TGG | - | chr8_1:57736650-57736669 | Msa1203480:CDS | 30.0% | |
| AATGAAAAGGTGATTCTTGT+GGG | - | chr8_1:57736651-57736670 | Msa1203480:CDS | 30.0% | |
| AATGGAACAATTTCCAGAAA+AGG | - | chr8_1:57736707-57736726 | Msa1203480:CDS | 30.0% | |
| ! | TTTCTTAACAGCTTTTATGC+CGG | - | chr8_1:57736743-57736762 | Msa1203480:CDS | 30.0% |
| !! | AAATTTTGTAGGTGGATTCT+AGG | - | chr8_1:57736918-57736937 | Msa1203480:intron | 30.0% |
| !! | AATTTTGTAGGTGGATTCTA+GGG | - | chr8_1:57736919-57736938 | Msa1203480:intron | 30.0% |
| GAAAGAACATTAATTCAGTG+TGG | + | chr8_1:57737032-57737051 | None:intergenic | 30.0% | |
| TCGAGTACTTACATTAGAAA+AGG | + | chr8_1:57737152-57737171 | None:intergenic | 30.0% | |
| TTCTAATGTAAGTACTCGAT+AGG | - | chr8_1:57737153-57737172 | Msa1203480:intron | 30.0% | |
| GTCAATGGTGATATTTATTG+TGG | + | chr8_1:57737253-57737272 | None:intergenic | 30.0% | |
| !!! | CAGTTGCGAAGTTTTTTAAA+TGG | - | chr8_1:57737292-57737311 | Msa1203480:intron | 30.0% |
| ! | TCAATTTTTAACCCAGACAA+TGG | - | chr8_1:57737506-57737525 | Msa1203480:intron | 30.0% |
| GTAAAAAAACCATGTCTCTA+GGG | + | chr8_1:57737549-57737568 | None:intergenic | 30.0% | |
| !!! | ATATCTTTTTAAGTGTCCTG+AGG | + | chr8_1:57737791-57737810 | None:intergenic | 30.0% |
| CAGGACACTTAAAAAGATAT+CGG | - | chr8_1:57737791-57737810 | Msa1203480:intron | 30.0% | |
| AGGACACTTAAAAAGATATC+GGG | - | chr8_1:57737792-57737811 | Msa1203480:intron | 30.0% | |
| ! | TATTTAGCATTTTTGTCGGT+GGG | - | chr8_1:57737847-57737866 | Msa1203480:intron | 30.0% |
| !! | GGGGGAAAAGTATATTTTAA+GGG | + | chr8_1:57737922-57737941 | None:intergenic | 30.0% |
| ! | TCGGTACCATTTTATTGTAA+AGG | + | chr8_1:57737991-57738010 | None:intergenic | 30.0% |
| AAAGCAAAACTTTCCAGTTT+CGG | + | chr8_1:57738010-57738029 | None:intergenic | 30.0% | |
| !! | TTGATACTTTTGGAAACGAT+AGG | + | chr8_1:57738124-57738143 | None:intergenic | 30.0% |
| ! | ATTCGTTCGAGTTTAAATTC+AGG | - | chr8_1:57738215-57738234 | Msa1203480:intron | 30.0% |
| GACCACAAATTCAAATTAAG+AGG | + | chr8_1:57738432-57738451 | None:intergenic | 30.0% | |
| GATTCTCTCAAACTTTACAT+GGG | + | chr8_1:57738495-57738514 | None:intergenic | 30.0% | |
| TGATTCTCTCAAACTTTACA+TGG | + | chr8_1:57738496-57738515 | None:intergenic | 30.0% | |
| TGCAGTTGACACAAATTAAA+AGG | + | chr8_1:57738614-57738633 | None:intergenic | 30.0% | |
| TGACTTGAATTCAAGTAAGT+AGG | + | chr8_1:57738757-57738776 | None:intergenic | 30.0% | |
| AATTGTCACATTTACACTTG+TGG | - | chr8_1:57738877-57738896 | Msa1203480:intron | 30.0% | |
| ATTGAAGAGATATGGAATTG+AGG | - | chr8_1:57738974-57738993 | Msa1203480:intron | 30.0% | |
| TTGAAGAGATATGGAATTGA+GGG | - | chr8_1:57738975-57738994 | Msa1203480:intron | 30.0% | |
| AGCTTATTGGACAAGAATTT+GGG | + | chr8_1:57739134-57739153 | None:intergenic | 30.0% | |
| TATAGTACTAGTATGAGACA+AGG | + | chr8_1:57739207-57739226 | None:intergenic | 30.0% | |
| CAAGATAACTTCTCTAAACA+GGG | - | chr8_1:57739387-57739406 | Msa1203480:CDS | 30.0% | |
| GAAATTTCAATGGAATTCCA+AGG | + | chr8_1:57739455-57739474 | None:intergenic | 30.0% | |
| TTCCATTGAAATTTCAACAC+TGG | - | chr8_1:57739460-57739479 | Msa1203480:CDS | 30.0% | |
| ! | ATCCAGTGTTGAAATTTCAA+TGG | + | chr8_1:57739465-57739484 | None:intergenic | 30.0% |
| TGATGTATATGAGATCAAAG+GGG | - | chr8_1:57739506-57739525 | Msa1203480:CDS | 30.0% | |
| AGAGAATTACATAGTTCTTG+TGG | + | chr8_1:57739558-57739577 | None:intergenic | 30.0% | |
| !! | ACATGCTGATTCCTTTATTT+CGG | + | chr8_1:57739657-57739676 | None:intergenic | 30.0% |
| TGTGAGAAACTTTATTGTAG+AGG | - | chr8_1:57739684-57739703 | Msa1203480:exon | 30.0% | |
| TGAACCATTGTTGAAGCTAA+TGG | - | chr8_1:57736614-57736633 | Msa1203480:CDS | 35.0% | |
| !! | CTTTTCATTTGGTGGAATTG+TGG | + | chr8_1:57736640-57736659 | None:intergenic | 35.0% |
| CACAATTCCACCAAATGAAA+AGG | - | chr8_1:57736638-57736657 | Msa1203480:CDS | 35.0% | |
| ! | AGAATCACCTTTTCATTTGG+TGG | + | chr8_1:57736648-57736667 | None:intergenic | 35.0% |
| ACACAATGCTTCTTATGTCA+TGG | - | chr8_1:57736773-57736792 | Msa1203480:CDS | 35.0% | |
| TGCTTCTTATGTCATGGAAA+AGG | - | chr8_1:57736779-57736798 | Msa1203480:intron | 35.0% | |
| !! | AATCTAACGGTTAAGTTGAG+TGG | + | chr8_1:57736976-57736995 | None:intergenic | 35.0% |
| ! | TCAGTGTTTCTGAGTATTCA+CGG | + | chr8_1:57737081-57737100 | None:intergenic | 35.0% |
| TGACATGAGAAAGACATTGA+TGG | + | chr8_1:57737220-57737239 | None:intergenic | 35.0% | |
| ATTTCACCATCGAAGCATAA+TGG | - | chr8_1:57737397-57737416 | Msa1203480:intron | 35.0% | |
| TTTCACCATCGAAGCATAAT+GGG | - | chr8_1:57737398-57737417 | Msa1203480:intron | 35.0% | |
| ! | TTTTTCCCATTATGCTTCGA+TGG | + | chr8_1:57737406-57737425 | None:intergenic | 35.0% |
| ! | GAAGCATAATGGGAAAAATC+TGG | - | chr8_1:57737408-57737427 | Msa1203480:intron | 35.0% |
| TGAATTTCCATTTGTGTGGA+TGG | - | chr8_1:57737463-57737482 | Msa1203480:intron | 35.0% | |
| TATTTCCACAACCATTGTCT+GGG | + | chr8_1:57737520-57737539 | None:intergenic | 35.0% | |
| TTATTTCCACAACCATTGTC+TGG | + | chr8_1:57737521-57737540 | None:intergenic | 35.0% | |
| GGTAAAAAAACCATGTCTCT+AGG | + | chr8_1:57737550-57737569 | None:intergenic | 35.0% | |
| !!! | ACATGGTTTTTTTACCAGTG+AGG | - | chr8_1:57737554-57737573 | Msa1203480:intron | 35.0% |
| !!! | CATGGTTTTTTTACCAGTGA+GGG | - | chr8_1:57737555-57737574 | Msa1203480:intron | 35.0% |
| TACAAAATTGGTGGAGTCTA+GGG | + | chr8_1:57737693-57737712 | None:intergenic | 35.0% | |
| ATACAAAATTGGTGGAGTCT+AGG | + | chr8_1:57737694-57737713 | None:intergenic | 35.0% | |
| ! | AAATATTTACAGAGTGCCTC+AGG | - | chr8_1:57737772-57737791 | Msa1203480:intron | 35.0% |
| GGACACTTAAAAAGATATCG+GGG | - | chr8_1:57737793-57737812 | Msa1203480:intron | 35.0% | |
| ! | CTATTTAGCATTTTTGTCGG+TGG | - | chr8_1:57737846-57737865 | Msa1203480:intron | 35.0% |
| !! | GGGGGGAAAAGTATATTTTA+AGG | + | chr8_1:57737923-57737942 | None:intergenic | 35.0% |
| ! | CAATAAAATGGTACCGAAAC+TGG | - | chr8_1:57737994-57738013 | Msa1203480:intron | 35.0% |
| TGTTGGATAGCGATAATTCA+AGG | + | chr8_1:57738036-57738055 | None:intergenic | 35.0% | |
| TGAAAGAAACTGATGCCTAA+AGG | + | chr8_1:57738082-57738101 | None:intergenic | 35.0% | |
| TTGGAAACGATAGGTAAGTA+GGG | + | chr8_1:57738115-57738134 | None:intergenic | 35.0% | |
| TTTGGAAACGATAGGTAAGT+AGG | + | chr8_1:57738116-57738135 | None:intergenic | 35.0% | |
| GAGATATCATACTCTCTACT+TGG | - | chr8_1:57738273-57738292 | Msa1203480:intron | 35.0% | |
| ATTGCAATCTTCATTGACGT+TGG | + | chr8_1:57738519-57738538 | None:intergenic | 35.0% | |
| ! | CATAGATGTGATTTGTGTTC+TGG | + | chr8_1:57738580-57738599 | None:intergenic | 35.0% |
| AGTAGGACTATTGAGGTTTA+TGG | + | chr8_1:57738740-57738759 | None:intergenic | 35.0% | |
| TCAAGTAAGTAGGACTATTG+AGG | + | chr8_1:57738747-57738766 | None:intergenic | 35.0% | |
| !!! | TTGATGTTTTGTTTCCACAC+TGG | + | chr8_1:57739100-57739119 | None:intergenic | 35.0% |
| GAGCTTATTGGACAAGAATT+TGG | + | chr8_1:57739135-57739154 | None:intergenic | 35.0% | |
| ACAAACTACTTGGATTTAGC+AGG | - | chr8_1:57739302-57739321 | Msa1203480:intron | 35.0% | |
| GATTTAGCAGGATCTTGAAT+TGG | - | chr8_1:57739314-57739333 | Msa1203480:intron | 35.0% | |
| AATTGGCCAAGACTTTATTG+AGG | - | chr8_1:57739331-57739350 | Msa1203480:CDS | 35.0% | |
| AGTCAAGTCTTCCATAAAGA+GGG | + | chr8_1:57739364-57739383 | None:intergenic | 35.0% | |
| GCAAGATAACTTCTCTAAAC+AGG | - | chr8_1:57739386-57739405 | Msa1203480:CDS | 35.0% | |
| AACTTCTCTAAACAGGGTTA+TGG | - | chr8_1:57739393-57739412 | Msa1203480:CDS | 35.0% | |
| ACTTCTCTAAACAGGGTTAT+GGG | - | chr8_1:57739394-57739413 | Msa1203480:CDS | 35.0% | |
| ! | TTGCAAACAATAAAAGCACG+TGG | + | chr8_1:57739426-57739445 | None:intergenic | 35.0% |
| ATTGTTTGCAATGAAGACCT+TGG | - | chr8_1:57739435-57739454 | Msa1203480:CDS | 35.0% | |
| ! | CATCATTAATCCCAGCATTT+TGG | + | chr8_1:57739491-57739510 | None:intergenic | 35.0% |
| GAGAAACTTTATTGTAGAGG+TGG | - | chr8_1:57739687-57739706 | Msa1203480:exon | 35.0% | |
| ! | TTTAGAATCTGCTGGTCATG+TGG | - | chr8_1:57736515-57736534 | Msa1203480:CDS | 40.0% |
| ATTCTTGACCTTTCAGCTTC+TGG | - | chr8_1:57736543-57736562 | Msa1203480:CDS | 40.0% | |
| ATTCTTGTGGGTCATAGTCT+TGG | - | chr8_1:57736663-57736682 | Msa1203480:CDS | 40.0% | |
| ACTTAGCATAGCTCTTGCAA+TGG | - | chr8_1:57736689-57736708 | Msa1203480:CDS | 40.0% | |
| TTTCCAGAAAAGGTTGCTGT+TGG | - | chr8_1:57736717-57736736 | Msa1203480:CDS | 40.0% | |
| !! | GAAGCATTGTGTTGAATGTC+CGG | + | chr8_1:57736765-57736784 | None:intergenic | 40.0% |
| AAGACTCATGCGATCTCATT+AGG | - | chr8_1:57737000-57737019 | Msa1203480:CDS | 40.0% | |
| CATGAGAAAGACATTGATGG+AGG | + | chr8_1:57737217-57737236 | None:intergenic | 40.0% | |
| CTTCAATATCAAGCACGCAA+TGG | + | chr8_1:57737364-57737383 | None:intergenic | 40.0% | |
| CGTGCTTGATATTGAAGATG+CGG | - | chr8_1:57737367-57737386 | Msa1203480:intron | 40.0% | |
| GGACTGAATTTCCATTTGTG+TGG | - | chr8_1:57737459-57737478 | Msa1203480:intron | 40.0% | |
| TTTAACCCAGACAATGGTTG+TGG | - | chr8_1:57737512-57737531 | Msa1203480:intron | 40.0% | |
| GTGGAGTAACACACATTTGT+TGG | + | chr8_1:57738053-57738072 | None:intergenic | 40.0% | |
| TTACTCCACAGTTCACCTTT+AGG | - | chr8_1:57738064-57738083 | Msa1203480:intron | 40.0% | |
| !!! | ATGGTTTTTTCGAACCTTGC+AGG | + | chr8_1:57738721-57738740 | None:intergenic | 40.0% |
| !! | GGAGTGTTGATAGAGCTTAT+TGG | + | chr8_1:57739147-57739166 | None:intergenic | 40.0% |
| TTAACGTGTAGTTACCTCAG+TGG | + | chr8_1:57739171-57739190 | None:intergenic | 40.0% | |
| GAGTCAAGTCTTCCATAAAG+AGG | + | chr8_1:57739365-57739384 | None:intergenic | 40.0% | |
| ACTGGATGATCCAAAATGCT+GGG | - | chr8_1:57739478-57739497 | Msa1203480:CDS | 40.0% | |
| ! | AAGCCACGTTTAGAATCTGC+TGG | - | chr8_1:57736507-57736526 | Msa1203480:exon | 45.0% |
| TGACCAGCAGATTCTAAACG+TGG | + | chr8_1:57736513-57736532 | None:intergenic | 45.0% | |
| ! | AGTTGGTTCCAGAAGCTGAA+AGG | + | chr8_1:57736554-57736573 | None:intergenic | 45.0% |
| ! | GTGGCCATTAGCTTCAACAA+TGG | + | chr8_1:57736621-57736640 | None:intergenic | 45.0% |
| ! | ACACCAACAGCAACCTTTTC+TGG | + | chr8_1:57736723-57736742 | None:intergenic | 45.0% |
| ! | GTGTTTCTGAGTATTCACGG+TGG | + | chr8_1:57737078-57737097 | None:intergenic | 45.0% |
| ATAACCTGACCCTAGAGACA+TGG | - | chr8_1:57737537-57737556 | Msa1203480:intron | 45.0% | |
| !! | AAAACCATGTCTCTAGGGTC+AGG | + | chr8_1:57737544-57737563 | None:intergenic | 45.0% |
| TTACCAGTGAGGGAAGAAGA+TGG | - | chr8_1:57737565-57737584 | Msa1203480:intron | 45.0% | |
| TTGTTGTACACCGTCTACAC+TGG | + | chr8_1:57737598-57737617 | None:intergenic | 45.0% | |
| !! | AGCATTTTTGTCGGTGGGTT+AGG | - | chr8_1:57737852-57737871 | Msa1203480:intron | 45.0% |
| TGATGCCTAAAGGTGAACTG+TGG | + | chr8_1:57738072-57738091 | None:intergenic | 45.0% | |
| !! | GTATATTGAGAGTACCCCGA+CGG | - | chr8_1:57739049-57739068 | Msa1203480:intron | 45.0% |
| CCAAGACTTTATTGAGGCCA+GGG | - | chr8_1:57739337-57739356 | Msa1203480:CDS | 45.0% | |
| CACTGGATGATCCAAAATGC+TGG | - | chr8_1:57739477-57739496 | Msa1203480:CDS | 45.0% | |
| GATCAAAGGGGCAGATCATA+TGG | - | chr8_1:57739518-57739537 | Msa1203480:CDS | 45.0% | |
| !!! | AAATTATTCTTTAAAAAAAT+CGG | + | chr8_1:57737743-57737762 | None:intergenic | 5.0% |
| !!! | TAAATTTTGTTATAAAAAAA+TGG | + | chr8_1:57738454-57738473 | None:intergenic | 5.0% |
| CTTGTACATGGTGCTTGCCA+TGG | - | chr8_1:57736462-57736481 | Msa1203480:three_prime_UTR | 50.0% | |
| TGTACCAACTCCAAGCACCA+TGG | + | chr8_1:57736482-57736501 | None:intergenic | 50.0% | |
| !! | TGGTGCTTGGAGTTGGTACA+AGG | - | chr8_1:57736482-57736501 | Msa1203480:three_prime_UTR | 50.0% |
| ! | CTTGTGGGTCATAGTCTTGG+AGG | - | chr8_1:57736666-57736685 | Msa1203480:CDS | 50.0% |
| !! | TGTAGGTGGATTCTAGGGTG+AGG | - | chr8_1:57736924-57736943 | Msa1203480:intron | 50.0% |
| !! | GTAGGTGGATTCTAGGGTGA+GGG | - | chr8_1:57736925-57736944 | Msa1203480:intron | 50.0% |
| GGCTCTATTAAGTCCCTCAC+CGG | - | chr8_1:57736946-57736965 | Msa1203480:CDS | 50.0% | |
| TCTATTAAGTCCCTCACCGG+TGG | - | chr8_1:57736949-57736968 | Msa1203480:CDS | 50.0% | |
| !! | GGTTAAGTTGAGTGGTCCAC+CGG | + | chr8_1:57736968-57736987 | None:intergenic | 50.0% |
| CACTCGTCCATCCACACAAA+TGG | + | chr8_1:57737473-57737492 | None:intergenic | 50.0% | |
| TGGCTGTGATCCAGTGTAGA+CGG | - | chr8_1:57737585-57737604 | Msa1203480:intron | 50.0% | |
| GCCTCTTAATAGTGCTCCAC+CGG | - | chr8_1:57737644-57737663 | Msa1203480:intron | 50.0% | |
| ! | ACCGGTGGAGCACTATTAAG+AGG | + | chr8_1:57737648-57737667 | None:intergenic | 50.0% |
| TTAATAGTGCTCCACCGGTG+AGG | - | chr8_1:57737649-57737668 | Msa1203480:intron | 50.0% | |
| TAATAGTGCTCCACCGGTGA+GGG | - | chr8_1:57737650-57737669 | Msa1203480:intron | 50.0% | |
| GGTCCAATTAAGTCCCTCAC+CGG | + | chr8_1:57737666-57737685 | None:intergenic | 50.0% | |
| ! | ATTGGTGGAGTCTAGGGTGA+GGG | + | chr8_1:57737687-57737706 | None:intergenic | 50.0% |
| ! | AATTGGTGGAGTCTAGGGTG+AGG | + | chr8_1:57737688-57737707 | None:intergenic | 50.0% |
| GCAGAAACACATCTCCTGCA+AGG | - | chr8_1:57738704-57738723 | Msa1203480:intron | 50.0% | |
| GACACTGAATTCTGCCAGTG+TGG | - | chr8_1:57739083-57739102 | Msa1203480:intron | 50.0% | |
| CTATCAACACTCCTCCACTG+AGG | - | chr8_1:57739154-57739173 | Msa1203480:intron | 50.0% | |
| ACGTGTAGTTACCTCAGTGG+AGG | + | chr8_1:57739168-57739187 | None:intergenic | 50.0% | |
| GCCAAGACTTTATTGAGGCC+AGG | - | chr8_1:57739336-57739355 | Msa1203480:CDS | 50.0% | |
| CCCTGGCCTCAATAAAGTCT+TGG | + | chr8_1:57739340-57739359 | None:intergenic | 50.0% | |
| TCTTCCATAAAGAGGGACCC+TGG | + | chr8_1:57739357-57739376 | None:intergenic | 50.0% | |
| ATGGTGCTTGCCATGGTGCT+TGG | - | chr8_1:57736469-57736488 | Msa1203480:three_prime_UTR | 55.0% | |
| CTTGCCATGGTGCTTGGAGT+TGG | - | chr8_1:57736475-57736494 | Msa1203480:three_prime_UTR | 55.0% | |
| CACGGTGGAGAGAGTGAGAT+TGG | + | chr8_1:57737063-57737082 | None:intergenic | 55.0% | |
| CAGCCATCTTCTTCCCTCAC+TGG | + | chr8_1:57737571-57737590 | None:intergenic | 55.0% | |
| CCAATTAAGTCCCTCACCGG+TGG | + | chr8_1:57737663-57737682 | None:intergenic | 55.0% | |
| CCACCGGTGAGGGACTTAAT+TGG | - | chr8_1:57737660-57737679 | Msa1203480:intron | 55.0% | |
| TGTCCAACCATTCAGCCGTC+GGG | + | chr8_1:57739067-57739086 | None:intergenic | 55.0% | |
| GTGTCCAACCATTCAGCCGT+CGG | + | chr8_1:57739068-57739087 | None:intergenic | 55.0% | |
| GTTGAGTGGTCCACCGGTGA+GGG | + | chr8_1:57736962-57736981 | None:intergenic | 60.0% | |
| AGTTGAGTGGTCCACCGGTG+AGG | + | chr8_1:57736963-57736982 | None:intergenic | 60.0% | |
| ! | AGAGTACCCCGACGGCTGAA+TGG | - | chr8_1:57739057-57739076 | Msa1203480:intron | 60.0% |
| TACCCCGACGGCTGAATGGT+TGG | - | chr8_1:57739061-57739080 | Msa1203480:intron | 60.0% | |
| GTCCAACCATTCAGCCGTCG+GGG | + | chr8_1:57739066-57739085 | None:intergenic | 60.0% | |
| GAGGCCAGGGTCCCTCTTTA+TGG | - | chr8_1:57739350-57739369 | Msa1203480:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 57736379 | 57739741 | 57736379 | ID=Msa1203480;Name=Msa1203480 |
| chr8_1 | mRNA | 57736379 | 57739741 | 57736379 | ID=Msa1203480-mRNA-1;Parent=Msa1203480;Name=Msa1203480-mRNA-1;_AED=0.09;_eAED=0.09;_QI=44|1|1|1|1|1|3|136|261 |
| chr8_1 | exon | 57736379 | 57736796 | 57736379 | ID=Msa1203480-mRNA-1:exon:18886;Parent=Msa1203480-mRNA-1 |
| chr8_1 | exon | 57736945 | 57737070 | 57736945 | ID=Msa1203480-mRNA-1:exon:18885;Parent=Msa1203480-mRNA-1 |
| chr8_1 | exon | 57739320 | 57739741 | 57739320 | ID=Msa1203480-mRNA-1:exon:18884;Parent=Msa1203480-mRNA-1 |
| chr8_1 | five_prime_UTR | 57739698 | 57739741 | 57739698 | ID=Msa1203480-mRNA-1:five_prime_utr;Parent=Msa1203480-mRNA-1 |
| chr8_1 | CDS | 57739320 | 57739697 | 57739320 | ID=Msa1203480-mRNA-1:cds;Parent=Msa1203480-mRNA-1 |
| chr8_1 | CDS | 57736945 | 57737070 | 57736945 | ID=Msa1203480-mRNA-1:cds;Parent=Msa1203480-mRNA-1 |
| chr8_1 | CDS | 57736515 | 57736796 | 57736515 | ID=Msa1203480-mRNA-1:cds;Parent=Msa1203480-mRNA-1 |
| chr8_1 | three_prime_UTR | 57736379 | 57736514 | 57736379 | ID=Msa1203480-mRNA-1:three_prime_utr;Parent=Msa1203480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
