Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267480 | RHN42187.1 | 95.769 | 260 | 11 | 0 | 1 | 260 | 43 | 302 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267480 | sp|Q6RYA0|SABP2_TOBAC | 59.608 | 255 | 99 | 1 | 10 | 260 | 5 | 259 | 7.90e-114 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267480 | A0A396GUA0 | 95.769 | 260 | 11 | 0 | 1 | 260 | 43 | 302 | 0.0 | 526 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0082420 | Msa1267480 | 0.811516 | 6.733964e-51 | -8.615850e-47 |
| Msa0090510 | Msa1267480 | 0.804540 | 2.057419e-49 | -8.615850e-47 |
| Msa0641130 | Msa1267480 | 0.814057 | 1.869815e-51 | -8.615850e-47 |
| Msa0164910 | Msa1267480 | 0.809058 | 2.283025e-50 | -8.615850e-47 |
| Msa0196670 | Msa1267480 | 0.800618 | 1.324446e-48 | -8.615850e-47 |
| Msa0213540 | Msa1267480 | 0.828176 | 1.039741e-54 | -8.615850e-47 |
| Msa1239620 | Msa1267480 | 0.812883 | 3.387808e-51 | -8.615850e-47 |
| Msa1267480 | Msa1267510 | 0.999391 | 5.046581e-308 | -8.615850e-47 |
| Msa1267480 | Msa1305180 | 0.964316 | 3.572873e-123 | -8.615850e-47 |
| Msa1267480 | Msa1305330 | 0.966255 | 1.120587e-125 | -8.615850e-47 |
| Msa1013070 | Msa1267480 | 0.816423 | 5.573355e-52 | -8.615850e-47 |
| Msa1062040 | Msa1267480 | 0.813296 | 2.750682e-51 | -8.615850e-47 |
| Msa1094280 | Msa1267480 | 0.832435 | 9.470721e-56 | -8.615850e-47 |
| Msa0331020 | Msa1267480 | 0.842132 | 3.116584e-58 | -8.615850e-47 |
| Msa1131230 | Msa1267480 | 0.958368 | 2.802971e-116 | -8.615850e-47 |
| Msa1203480 | Msa1267480 | 0.999037 | 4.123087e-287 | -8.615850e-47 |
| Msa0545050 | Msa1267480 | 0.816488 | 5.387902e-52 | -8.615850e-47 |
| Msa0600590 | Msa1267480 | 0.811290 | 7.539424e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267480 | MtrunA17_Chr8g0374141 | 95.769 | 260 | 11 | 0 | 1 | 260 | 43 | 302 | 0.0 | 526 |
| Msa1267480 | MtrunA17_Chr5g0402901 | 62.302 | 252 | 95 | 0 | 9 | 260 | 10 | 261 | 2.11e-116 | 334 |
| Msa1267480 | MtrunA17_Chr5g0402881 | 57.854 | 261 | 109 | 1 | 1 | 260 | 18 | 278 | 9.10e-109 | 315 |
| Msa1267480 | MtrunA17_Chr5g0402851 | 42.912 | 261 | 144 | 2 | 5 | 260 | 2 | 262 | 1.54e-73 | 225 |
| Msa1267480 | MtrunA17_Chr5g0402871 | 45.525 | 257 | 131 | 4 | 11 | 260 | 5 | 259 | 7.18e-73 | 223 |
| Msa1267480 | MtrunA17_Chr8g0336391 | 43.191 | 257 | 137 | 5 | 11 | 260 | 27 | 281 | 1.25e-68 | 213 |
| Msa1267480 | MtrunA17_Chr3g0104871 | 41.634 | 257 | 140 | 4 | 10 | 260 | 18 | 270 | 2.93e-66 | 207 |
| Msa1267480 | MtrunA17_Chr5g0402841 | 40.856 | 257 | 146 | 3 | 9 | 260 | 6 | 261 | 3.00e-65 | 204 |
| Msa1267480 | MtrunA17_Chr8g0336441 | 42.023 | 257 | 139 | 5 | 10 | 260 | 26 | 278 | 5.60e-63 | 199 |
| Msa1267480 | MtrunA17_Chr8g0336411 | 41.699 | 259 | 139 | 5 | 10 | 260 | 27 | 281 | 6.28e-62 | 196 |
| Msa1267480 | MtrunA17_Chr8g0336381 | 40.385 | 260 | 145 | 5 | 9 | 260 | 5 | 262 | 2.94e-60 | 191 |
| Msa1267480 | MtrunA17_Chr8g0336401 | 38.996 | 259 | 150 | 5 | 10 | 260 | 26 | 284 | 7.49e-59 | 188 |
| Msa1267480 | MtrunA17_Chr7g0219561 | 33.730 | 252 | 158 | 3 | 11 | 257 | 124 | 371 | 2.58e-37 | 135 |
| Msa1267480 | MtrunA17_Chr3g0077351 | 33.077 | 260 | 158 | 5 | 7 | 257 | 90 | 342 | 1.60e-36 | 132 |
| Msa1267480 | MtrunA17_Chr3g0128581 | 32.927 | 246 | 153 | 5 | 7 | 246 | 32 | 271 | 3.79e-34 | 124 |
| Msa1267480 | MtrunA17_Chr5g0428471 | 31.395 | 258 | 166 | 4 | 9 | 260 | 28 | 280 | 3.80e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267480 | AT2G23620.1 | 54.086 | 257 | 114 | 2 | 9 | 261 | 7 | 263 | 3.05e-102 | 298 |
| Msa1267480 | AT2G23610.1 | 52.734 | 256 | 117 | 3 | 9 | 260 | 7 | 262 | 4.58e-94 | 278 |
| Msa1267480 | AT2G23600.1 | 52.964 | 253 | 115 | 2 | 9 | 257 | 7 | 259 | 5.34e-94 | 277 |
| Msa1267480 | AT2G23600.2 | 52.964 | 253 | 115 | 2 | 9 | 257 | 22 | 274 | 5.79e-94 | 278 |
| Msa1267480 | AT2G23590.1 | 47.638 | 254 | 128 | 1 | 7 | 260 | 23 | 271 | 1.23e-88 | 264 |
| Msa1267480 | AT4G37150.1 | 48.627 | 255 | 126 | 2 | 10 | 260 | 2 | 255 | 6.40e-88 | 262 |
| Msa1267480 | AT2G23580.1 | 49.805 | 257 | 124 | 2 | 9 | 260 | 6 | 262 | 1.04e-87 | 261 |
| Msa1267480 | AT5G10300.1 | 49.027 | 257 | 125 | 2 | 9 | 261 | 4 | 258 | 9.07e-87 | 259 |
| Msa1267480 | AT2G23550.1 | 48.638 | 257 | 127 | 2 | 9 | 260 | 6 | 262 | 1.38e-83 | 251 |
| Msa1267480 | AT2G23550.4 | 48.638 | 257 | 127 | 2 | 9 | 260 | 13 | 269 | 1.67e-83 | 251 |
| Msa1267480 | AT2G23560.1 | 46.063 | 254 | 135 | 2 | 9 | 260 | 6 | 259 | 6.62e-80 | 241 |
| Msa1267480 | AT2G23610.2 | 46.640 | 253 | 92 | 2 | 9 | 260 | 7 | 217 | 1.13e-77 | 234 |
| Msa1267480 | AT3G50440.1 | 43.478 | 253 | 139 | 2 | 12 | 260 | 22 | 274 | 1.08e-72 | 224 |
| Msa1267480 | AT2G23550.2 | 45.312 | 256 | 108 | 2 | 9 | 260 | 6 | 233 | 8.81e-70 | 215 |
| Msa1267480 | AT2G23600.3 | 52.439 | 164 | 74 | 2 | 9 | 168 | 22 | 185 | 7.38e-59 | 185 |
| Msa1267480 | AT2G23570.1 | 48.315 | 178 | 88 | 1 | 87 | 260 | 1 | 178 | 6.79e-53 | 170 |
| Msa1267480 | AT2G23580.2 | 48.045 | 179 | 85 | 3 | 9 | 182 | 6 | 181 | 9.62e-53 | 170 |
| Msa1267480 | AT2G23550.3 | 47.273 | 165 | 82 | 2 | 9 | 168 | 13 | 177 | 3.28e-50 | 164 |
| Msa1267480 | AT5G10300.2 | 47.590 | 166 | 81 | 2 | 9 | 170 | 4 | 167 | 2.05e-47 | 157 |
| Msa1267480 | AT4G37140.1 | 53.846 | 117 | 54 | 0 | 10 | 126 | 2 | 118 | 3.09e-45 | 149 |
| Msa1267480 | AT4G09900.1 | 33.074 | 257 | 156 | 5 | 10 | 257 | 97 | 346 | 1.84e-39 | 140 |
| Msa1267480 | AT1G26360.1 | 32.669 | 251 | 164 | 2 | 10 | 257 | 188 | 436 | 4.38e-39 | 141 |
| Msa1267480 | AT1G33990.1 | 32.443 | 262 | 164 | 5 | 3 | 257 | 90 | 345 | 5.01e-39 | 139 |
| Msa1267480 | AT3G29770.1 | 35.294 | 255 | 150 | 5 | 11 | 257 | 138 | 385 | 1.65e-37 | 136 |
| Msa1267480 | AT5G58310.1 | 32.700 | 263 | 160 | 5 | 7 | 257 | 1 | 258 | 2.58e-37 | 132 |
| Msa1267480 | AT4G37140.2 | 58.242 | 91 | 38 | 0 | 10 | 100 | 2 | 92 | 4.44e-37 | 127 |
| Msa1267480 | AT1G69240.1 | 31.518 | 257 | 161 | 6 | 10 | 257 | 186 | 436 | 1.73e-36 | 134 |
| Msa1267480 | AT4G16690.1 | 31.707 | 246 | 153 | 4 | 11 | 249 | 12 | 249 | 3.33e-33 | 122 |
| Msa1267480 | AT3G10870.1 | 30.738 | 244 | 157 | 5 | 11 | 246 | 20 | 259 | 9.26e-31 | 115 |
| Msa1267480 | AT3G29770.2 | 40.278 | 72 | 43 | 0 | 11 | 82 | 138 | 209 | 2.86e-12 | 65.5 |
Find 70 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCATTAATCCCAGCATTT+TGG | 0.157812 | 8_2:+72751649 | None:intergenic |
| GAGCTTATTGGACAAGAATT+TGG | 0.162838 | 8_2:+72752005 | None:intergenic |
| GAGGCCAGGGTCCCTCTTTA+TGG | 0.202954 | 8_2:-72751787 | Msa1267480:CDS |
| ATTCTTGACCTTTCAGCTTC+TGG | 0.238179 | 8_2:-72754599 | Msa1267480:CDS |
| AACAAAACATCAATGTTCTT+TGG | 0.296879 | 8_2:-72752030 | Msa1267480:CDS |
| GCAAGATAACTTCTCTAAAC+AGG | 0.300900 | 8_2:-72751751 | Msa1267480:CDS |
| ACATGCTGATTCCTTTATTT+CGG | 0.312733 | 8_2:+72751483 | None:intergenic |
| TGAAGTTTAGCTTAATTTGT+TGG | 0.339405 | 8_2:-72751526 | Msa1267480:three_prime_UTR |
| AGCTTATTGGACAAGAATTT+GGG | 0.339872 | 8_2:+72752006 | None:intergenic |
| AACTTCTCTAAACAGGGTTA+TGG | 0.360676 | 8_2:-72751744 | Msa1267480:CDS |
| GGAGTGTTGATAGAGCTTAT+TGG | 0.392660 | 8_2:+72751993 | None:intergenic |
| ACTTCTCTAAACAGGGTTAT+GGG | 0.399672 | 8_2:-72751743 | Msa1267480:CDS |
| AATGGAACAATTTCCAGAAA+AGG | 0.417631 | 8_2:-72754435 | Msa1267480:CDS |
| ATTCTTGTGGGTCATAGTCT+TGG | 0.418009 | 8_2:-72754479 | Msa1267480:CDS |
| ATCCAGTGTTGAAATTTCAA+TGG | 0.421026 | 8_2:+72751675 | None:intergenic |
| GATTTAGCAGGATCTTGAAT+TGG | 0.423617 | 8_2:-72751823 | Msa1267480:intron |
| TGAACCATTGTTGAAGCTAA+TGG | 0.426644 | 8_2:-72754528 | Msa1267480:CDS |
| ATCTTCAAGTTTCTTCAAGT+TGG | 0.431463 | 8_2:+72754574 | None:intergenic |
| GTGCACAAAATTTAATTGCT+AGG | 0.449601 | 8_2:-72754715 | Msa1267480:CDS |
| TGCTTCTTATGTCATGGAAA+AGG | 0.451368 | 8_2:-72754363 | Msa1267480:intron |
| CACTGGATGATCCAAAATGC+TGG | 0.456893 | 8_2:-72751660 | Msa1267480:CDS |
| GATCAAAGGGGCAGATCATA+TGG | 0.460208 | 8_2:-72751619 | Msa1267480:CDS |
| TGTCCAACCATTCAGCCGTC+GGG | 0.460887 | 8_2:+72752073 | None:intergenic |
| ATGATGTATATGAGATCAAA+GGG | 0.461047 | 8_2:-72751632 | Msa1267480:CDS |
| CTTGTGGGTCATAGTCTTGG+AGG | 0.464347 | 8_2:-72754476 | Msa1267480:CDS |
| ATGGTGCTTGCCATGGTGCT+TGG | 0.470545 | 8_2:-72754673 | Msa1267480:CDS |
| TTCCATTGAAATTTCAACAC+TGG | 0.470781 | 8_2:-72751677 | Msa1267480:CDS |
| GCCAAGACTTTATTGAGGCC+AGG | 0.472046 | 8_2:-72751801 | Msa1267480:CDS |
| CACAATTCCACCAAATGAAA+AGG | 0.475812 | 8_2:-72754504 | Msa1267480:CDS |
| CTTGCCATGGTGCTTGGAGT+TGG | 0.476673 | 8_2:-72754667 | Msa1267480:CDS |
| GAAGCATTGTGTTGAATGTC+CGG | 0.482394 | 8_2:+72754380 | None:intergenic |
| CCCTGGCCTCAATAAAGTCT+TGG | 0.486588 | 8_2:+72751800 | None:intergenic |
| ACACAATGCTTCTTATGTCA+TGG | 0.491092 | 8_2:-72754369 | Msa1267480:CDS |
| AATGAAAAGGTGATTCTTGT+GGG | 0.497441 | 8_2:-72754491 | Msa1267480:CDS |
| CTTGTACATGGTGCTTGCCA+TGG | 0.498303 | 8_2:-72754680 | Msa1267480:CDS |
| CATAATGATTATTGTTGTTG+TGG | 0.503508 | 8_2:+72754739 | None:intergenic |
| TACCCCGACGGCTGAATGGT+TGG | 0.505808 | 8_2:-72752076 | Msa1267480:CDS |
| AGAGTACCCCGACGGCTGAA+TGG | 0.512702 | 8_2:-72752080 | Msa1267480:CDS |
| ATTGTTTGCAATGAAGACCT+TGG | 0.520269 | 8_2:-72751702 | Msa1267480:CDS |
| AGAGAATTACATAGTTCTTG+TGG | 0.522605 | 8_2:+72751582 | None:intergenic |
| CCAAGACTTTATTGAGGCCA+GGG | 0.522924 | 8_2:-72751800 | Msa1267480:CDS |
| GAAATTTCAATGGAATTCCA+AGG | 0.525367 | 8_2:+72751685 | None:intergenic |
| GTGTCCAACCATTCAGCCGT+CGG | 0.529692 | 8_2:+72752072 | None:intergenic |
| AAGCATTATGTTCTTGTACA+TGG | 0.531450 | 8_2:-72754692 | Msa1267480:CDS |
| TTTCCAGAAAAGGTTGCTGT+TGG | 0.543459 | 8_2:-72754425 | Msa1267480:CDS |
| AATGATGTATATGAGATCAA+AGG | 0.543714 | 8_2:-72751633 | Msa1267480:CDS |
| GAGAAACTTTATTGTAGAGG+TGG | 0.543747 | 8_2:-72751450 | Msa1267480:three_prime_UTR |
| AAATGAAAAGGTGATTCTTG+TGG | 0.544198 | 8_2:-72754492 | Msa1267480:CDS |
| AATTGGCCAAGACTTTATTG+AGG | 0.557607 | 8_2:-72751806 | Msa1267480:CDS |
| TGTGAGAAACTTTATTGTAG+AGG | 0.558702 | 8_2:-72751453 | Msa1267480:three_prime_UTR |
| TGGTGCTTGGAGTTGGTACA+AGG | 0.561033 | 8_2:-72754660 | Msa1267480:CDS |
| GTGGCCATTAGCTTCAACAA+TGG | 0.573860 | 8_2:+72754524 | None:intergenic |
| GAGTCAAGTCTTCCATAAAG+AGG | 0.579389 | 8_2:+72751775 | None:intergenic |
| AGTTGGTTCCAGAAGCTGAA+AGG | 0.584796 | 8_2:+72754591 | None:intergenic |
| AAGCCACGTTTAGAATCTGC+TGG | 0.586149 | 8_2:-72754635 | Msa1267480:CDS |
| ACTGGATGATCCAAAATGCT+GGG | 0.589459 | 8_2:-72751659 | Msa1267480:CDS |
| CAAGATAACTTCTCTAAACA+GGG | 0.605122 | 8_2:-72751750 | Msa1267480:CDS |
| ACTTAGCATAGCTCTTGCAA+TGG | 0.605259 | 8_2:-72754453 | Msa1267480:CDS |
| AGTCAAGTCTTCCATAAAGA+GGG | 0.612508 | 8_2:+72751776 | None:intergenic |
| TTTAGAATCTGCTGGTCATG+TGG | 0.623515 | 8_2:-72754627 | Msa1267480:CDS |
| GACACTGAATTCTGCCAGTG+TGG | 0.627184 | 8_2:-72752054 | Msa1267480:CDS |
| TCTTCCATAAAGAGGGACCC+TGG | 0.632528 | 8_2:+72751783 | None:intergenic |
| GTCCAACCATTCAGCCGTCG+GGG | 0.648788 | 8_2:+72752074 | None:intergenic |
| ACGTGTAGTTACCTCAGTGG+AGG | 0.650895 | 8_2:+72751972 | None:intergenic |
| TTAACGTGTAGTTACCTCAG+TGG | 0.666283 | 8_2:+72751969 | None:intergenic |
| TTGCAAACAATAAAAGCACG+TGG | 0.692906 | 8_2:+72751714 | None:intergenic |
| TGTACCAACTCCAAGCACCA+TGG | 0.696634 | 8_2:+72754663 | None:intergenic |
| TGACCAGCAGATTCTAAACG+TGG | 0.719220 | 8_2:+72754632 | None:intergenic |
| TGATGTATATGAGATCAAAG+GGG | 0.769291 | 8_2:-72751631 | Msa1267480:CDS |
| CTATCAACACTCCTCCACTG+AGG | 0.776664 | 8_2:-72751983 | Msa1267480:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAAAACATAAAAAG+GGG | + | chr8_2:72752986-72753005 | None:intergenic | 10.0% |
| !! | CATATAATAAAACATAAAAA+GGG | + | chr8_2:72752987-72753006 | None:intergenic | 10.0% |
| !! | ACATATAATAAAACATAAAA+AGG | + | chr8_2:72752988-72753007 | None:intergenic | 10.0% |
| !!! | AAATACATTTTATTCATTTA+TGG | + | chr8_2:72753349-72753368 | None:intergenic | 10.0% |
| !!! | CATAATAAGTAATTTTTATT+TGG | + | chr8_2:72753433-72753452 | None:intergenic | 10.0% |
| !! | TTTATAACAAAATTTAGATT+AGG | - | chr8_2:72753502-72753521 | Msa1267480:intron | 10.0% |
| !! | TTATAACAAAATTTAGATTA+GGG | - | chr8_2:72753503-72753522 | Msa1267480:intron | 10.0% |
| !! | ACAAAAAATAAGATTAATAA+TGG | + | chr8_2:72754059-72754078 | None:intergenic | 10.0% |
| !!! | TAGTTTTTATGAAATTTTGT+AGG | - | chr8_2:72751952-72751971 | Msa1267480:intron | 15.0% |
| !!! | ATAAGTCTTATTTAATCTAA+CGG | + | chr8_2:72752034-72752053 | None:intergenic | 15.0% |
| !! | GAAAATAAATTAAAAAGTTG+TGG | + | chr8_2:72752168-72752187 | None:intergenic | 15.0% |
| !! | TACTTCAGAAAATAATATAA+GGG | + | chr8_2:72752361-72752380 | None:intergenic | 15.0% |
| !! | TTACTTCAGAAAATAATATA+AGG | + | chr8_2:72752362-72752381 | None:intergenic | 15.0% |
| !!! | GAATTTGTAAAATTTTGTTA+TGG | - | chr8_2:72752474-72752493 | Msa1267480:intron | 15.0% |
| !! | ATACATTTAGTATACAAAAT+TGG | + | chr8_2:72752749-72752768 | None:intergenic | 15.0% |
| !! | TATAATAAAACATAAAAAGG+GGG | + | chr8_2:72752985-72753004 | None:intergenic | 15.0% |
| !! | CCTATATTTATAAAAACAAA+TGG | + | chr8_2:72753690-72753709 | None:intergenic | 15.0% |
| !!! | CCATTTGTTTTTATAAATAT+AGG | - | chr8_2:72753687-72753706 | Msa1267480:intron | 15.0% |
| !! | TCACAAATATGATTTCTATA+TGG | - | chr8_2:72751908-72751927 | Msa1267480:intron | 20.0% |
| !!! | TTTTTATGAAATTTTGTAGG+TGG | - | chr8_2:72751955-72751974 | Msa1267480:intron | 20.0% |
| !!! | TTTCCATTTTTTTTTGTCAA+TGG | + | chr8_2:72752312-72752331 | None:intergenic | 20.0% |
| !!! | TGGAAAATTTGAGTTATAAA+AGG | + | chr8_2:72752388-72752407 | None:intergenic | 20.0% |
| !!! | TAACTATTTAGCATTTTTGT+CGG | - | chr8_2:72752887-72752906 | Msa1267480:intron | 20.0% |
| !! | ATAATAAAACATAAAAAGGG+GGG | + | chr8_2:72752984-72753003 | None:intergenic | 20.0% |
| !! | ATTTGTCCTTTACAATAAAA+TGG | - | chr8_2:72753026-72753045 | Msa1267480:intron | 20.0% |
| !!! | AGTTAAATTCTTGATACTTT+TGG | + | chr8_2:72753178-72753197 | None:intergenic | 20.0% |
| !! | TCATACAAGAAAAATAGATT+AGG | - | chr8_2:72753727-72753746 | Msa1267480:intron | 20.0% |
| !! | TGACAATTAAAAAGTAATGA+AGG | + | chr8_2:72753909-72753928 | None:intergenic | 20.0% |
| !!! | AATTTTAAAACGACAAGTAA+GGG | + | chr8_2:72753982-72754001 | None:intergenic | 20.0% |
| !! | CATTAATTATTGAAGAGATA+TGG | - | chr8_2:72754010-72754029 | Msa1267480:intron | 20.0% |
| !! | TTGAAGTTTCCATTAAAAAA+TGG | - | chr8_2:72754297-72754316 | Msa1267480:intron | 20.0% |
| !!! | AATTGTACTCCATTTTTTAA+TGG | + | chr8_2:72754309-72754328 | None:intergenic | 20.0% |
| !! | CATAATGATTATTGTTGTTG+TGG | + | chr8_2:72751445-72751464 | None:intergenic | 25.0% |
| ! | TCAATGGTGATATTTATTGT+GGG | + | chr8_2:72752296-72752315 | None:intergenic | 25.0% |
| ! | TCACCATTGACAAAAAAAAA+TGG | - | chr8_2:72752306-72752325 | Msa1267480:intron | 25.0% |
| !!! | AAAATTTTGTTATGGAACGA+AGG | - | chr8_2:72752482-72752501 | Msa1267480:intron | 25.0% |
| ! | CATTTAGTATACAAAATTGG+TGG | + | chr8_2:72752746-72752765 | None:intergenic | 25.0% |
| ! | GAAGAACATGTAATAGAAAA+GGG | + | chr8_2:72752941-72752960 | None:intergenic | 25.0% |
| ! | AGAAGAACATGTAATAGAAA+AGG | + | chr8_2:72752942-72752961 | None:intergenic | 25.0% |
| ! | TAATAAAACATAAAAAGGGG+GGG | + | chr8_2:72752983-72753002 | None:intergenic | 25.0% |
| !! | TTCCTCTTAATTTGAATTTG+TGG | - | chr8_2:72753471-72753490 | Msa1267480:intron | 25.0% |
| ! | ATATAAAACGACAAGTAAGT+AGG | + | chr8_2:72753845-72753864 | None:intergenic | 25.0% |
| !! | TCTAAGACAATTAAGTAAAC+TGG | + | chr8_2:72753948-72753967 | None:intergenic | 25.0% |
| !!! | GAATTTTAAAACGACAAGTA+AGG | + | chr8_2:72753983-72754002 | None:intergenic | 25.0% |
| ! | AACAAAACATCAATGTTCTT+TGG | - | chr8_2:72754151-72754170 | Msa1267480:intron | 25.0% |
| ! | ACTAATAAAGACAAACTACT+TGG | - | chr8_2:72754336-72754355 | Msa1267480:intron | 25.0% |
| ! | AATGATGTATATGAGATCAA+AGG | - | chr8_2:72754548-72754567 | Msa1267480:CDS | 25.0% |
| ! | ATGATGTATATGAGATCAAA+GGG | - | chr8_2:72754549-72754568 | Msa1267480:CDS | 25.0% |
| !!! | TGAAGTTTAGCTTAATTTGT+TGG | - | chr8_2:72754655-72754674 | Msa1267480:CDS | 25.0% |
| !!! | TTACTTTTTGTCCGAAATAA+AGG | - | chr8_2:72754687-72754706 | Msa1267480:CDS | 25.0% |
| GTGCACAAAATTTAATTGCT+AGG | - | chr8_2:72751466-72751485 | Msa1267480:three_prime_UTR | 30.0% | |
| AAGCATTATGTTCTTGTACA+TGG | - | chr8_2:72751489-72751508 | Msa1267480:three_prime_UTR | 30.0% | |
| ! | ATCTTCAAGTTTCTTCAAGT+TGG | + | chr8_2:72751610-72751629 | None:intergenic | 30.0% |
| ! | ACAAGAATCACCTTTTCATT+TGG | + | chr8_2:72751690-72751709 | None:intergenic | 30.0% |
| AAATGAAAAGGTGATTCTTG+TGG | - | chr8_2:72751689-72751708 | Msa1267480:CDS | 30.0% | |
| AATGAAAAGGTGATTCTTGT+GGG | - | chr8_2:72751690-72751709 | Msa1267480:CDS | 30.0% | |
| AATGGAACAATTTCCAGAAA+AGG | - | chr8_2:72751746-72751765 | Msa1267480:CDS | 30.0% | |
| ! | TTTCTTAACAGCTTTTATGC+CGG | - | chr8_2:72751782-72751801 | Msa1267480:CDS | 30.0% |
| !! | AAATTTTGTAGGTGGATTCT+AGG | - | chr8_2:72751963-72751982 | Msa1267480:intron | 30.0% |
| !! | AATTTTGTAGGTGGATTCTA+GGG | - | chr8_2:72751964-72751983 | Msa1267480:intron | 30.0% |
| GAAAGAACATTAATTCAGTG+TGG | + | chr8_2:72752077-72752096 | None:intergenic | 30.0% | |
| ATCGAGTACTTACATTAGAA+AGG | + | chr8_2:72752197-72752216 | None:intergenic | 30.0% | |
| TTCTAATGTAAGTACTCGAT+AGG | - | chr8_2:72752197-72752216 | Msa1267480:intron | 30.0% | |
| TGACATGAGAAAGACATTAA+TGG | + | chr8_2:72752264-72752283 | None:intergenic | 30.0% | |
| GTCAATGGTGATATTTATTG+TGG | + | chr8_2:72752297-72752316 | None:intergenic | 30.0% | |
| ! | TCAATTTTTAACCCAGACAA+TGG | - | chr8_2:72752550-72752569 | Msa1267480:intron | 30.0% |
| GTAAAAAAACCATGTCTCTA+GGG | + | chr8_2:72752593-72752612 | None:intergenic | 30.0% | |
| ! | AAATATTTACAGAGTGTCTC+AGG | - | chr8_2:72752816-72752835 | Msa1267480:intron | 30.0% |
| CAGGACACTTAAAAAGATAT+CGG | - | chr8_2:72752835-72752854 | Msa1267480:intron | 30.0% | |
| AGGACACTTAAAAAGATATC+GGG | - | chr8_2:72752836-72752855 | Msa1267480:intron | 30.0% | |
| ! | TATTTAGCATTTTTGTCGGT+GGG | - | chr8_2:72752891-72752910 | Msa1267480:intron | 30.0% |
| ! | TCGGTACCATTTTATTGTAA+AGG | + | chr8_2:72753035-72753054 | None:intergenic | 30.0% |
| AAAGCAAAACTTTCCAGTTT+CGG | + | chr8_2:72753054-72753073 | None:intergenic | 30.0% | |
| !! | TTGATACTTTTGGAAACGAT+AGG | + | chr8_2:72753168-72753187 | None:intergenic | 30.0% |
| ! | ATTCGTTCGAGTTTAAATTC+AGG | - | chr8_2:72753259-72753278 | Msa1267480:intron | 30.0% |
| GACCACAAATTCAAATTAAG+AGG | + | chr8_2:72753476-72753495 | None:intergenic | 30.0% | |
| GATTCTCTCAAACTTTACAT+GGG | + | chr8_2:72753539-72753558 | None:intergenic | 30.0% | |
| TGATTCTCTCAAACTTTACA+TGG | + | chr8_2:72753540-72753559 | None:intergenic | 30.0% | |
| TGCAGTTGACACAAATTAAA+AGG | + | chr8_2:72753658-72753677 | None:intergenic | 30.0% | |
| TGACTTGAATTCAAGTAAGT+AGG | + | chr8_2:72753801-72753820 | None:intergenic | 30.0% | |
| AATTGTCACATTTACACTTG+TGG | - | chr8_2:72753921-72753940 | Msa1267480:intron | 30.0% | |
| ATTGAAGAGATATGGAATTG+AGG | - | chr8_2:72754018-72754037 | Msa1267480:intron | 30.0% | |
| TTGAAGAGATATGGAATTGA+GGG | - | chr8_2:72754019-72754038 | Msa1267480:intron | 30.0% | |
| AGCTTATTGGACAAGAATTT+GGG | + | chr8_2:72754178-72754197 | None:intergenic | 30.0% | |
| TATAGTACTAGTATGAGACA+AGG | + | chr8_2:72754251-72754270 | None:intergenic | 30.0% | |
| CAAGATAACTTCTCTAAACA+GGG | - | chr8_2:72754431-72754450 | Msa1267480:CDS | 30.0% | |
| GAAATTTCAATGGAATTCCA+AGG | + | chr8_2:72754499-72754518 | None:intergenic | 30.0% | |
| TTCCATTGAAATTTCAACAC+TGG | - | chr8_2:72754504-72754523 | Msa1267480:CDS | 30.0% | |
| ! | ATCCAGTGTTGAAATTTCAA+TGG | + | chr8_2:72754509-72754528 | None:intergenic | 30.0% |
| TGATGTATATGAGATCAAAG+GGG | - | chr8_2:72754550-72754569 | Msa1267480:CDS | 30.0% | |
| AGAGAATTACATAGTTCTTG+TGG | + | chr8_2:72754602-72754621 | None:intergenic | 30.0% | |
| !! | ACATGCTGATTCCTTTATTT+CGG | + | chr8_2:72754701-72754720 | None:intergenic | 30.0% |
| TGTGAGAAACTTTATTGTAG+AGG | - | chr8_2:72754728-72754747 | Msa1267480:exon | 30.0% | |
| TGAACCATTGTTGAAGCTAA+TGG | - | chr8_2:72751653-72751672 | Msa1267480:CDS | 35.0% | |
| !! | CTTTTCATTTGGTGGAATTG+TGG | + | chr8_2:72751679-72751698 | None:intergenic | 35.0% |
| CACAATTCCACCAAATGAAA+AGG | - | chr8_2:72751677-72751696 | Msa1267480:CDS | 35.0% | |
| ! | AGAATCACCTTTTCATTTGG+TGG | + | chr8_2:72751687-72751706 | None:intergenic | 35.0% |
| ACACAATGCTTCTTATGTCA+TGG | - | chr8_2:72751812-72751831 | Msa1267480:CDS | 35.0% | |
| TGCTTCTTATGTCATGGAAA+AGG | - | chr8_2:72751818-72751837 | Msa1267480:intron | 35.0% | |
| !! | AATCTAACGGTTAAGTTGAG+TGG | + | chr8_2:72752021-72752040 | None:intergenic | 35.0% |
| AAGACTTATGCGATCTCATT+AGG | - | chr8_2:72752045-72752064 | Msa1267480:CDS | 35.0% | |
| ! | TCAGTGTTTCTGAGTATTCA+CGG | + | chr8_2:72752126-72752145 | None:intergenic | 35.0% |
| CATGAGAAAGACATTAATGG+AGG | + | chr8_2:72752261-72752280 | None:intergenic | 35.0% | |
| ATTTCACCATCGAAGCATAA+TGG | - | chr8_2:72752441-72752460 | Msa1267480:intron | 35.0% | |
| TTTCACCATCGAAGCATAAT+GGG | - | chr8_2:72752442-72752461 | Msa1267480:intron | 35.0% | |
| ! | TTTTTCCCATTATGCTTCGA+TGG | + | chr8_2:72752450-72752469 | None:intergenic | 35.0% |
| ! | GAAGCATAATGGGAAAAATC+TGG | - | chr8_2:72752452-72752471 | Msa1267480:intron | 35.0% |
| TGAATTTCCATTTGTGTGGA+TGG | - | chr8_2:72752507-72752526 | Msa1267480:intron | 35.0% | |
| TATTTCCACAACCATTGTCT+GGG | + | chr8_2:72752564-72752583 | None:intergenic | 35.0% | |
| TTATTTCCACAACCATTGTC+TGG | + | chr8_2:72752565-72752584 | None:intergenic | 35.0% | |
| GGTAAAAAAACCATGTCTCT+AGG | + | chr8_2:72752594-72752613 | None:intergenic | 35.0% | |
| !!! | ACATGGTTTTTTTACCAGTG+AGG | - | chr8_2:72752598-72752617 | Msa1267480:intron | 35.0% |
| !!! | CATGGTTTTTTTACCAGTGA+GGG | - | chr8_2:72752599-72752618 | Msa1267480:intron | 35.0% |
| TACAAAATTGGTGGAGTCTA+GGG | + | chr8_2:72752737-72752756 | None:intergenic | 35.0% | |
| ATACAAAATTGGTGGAGTCT+AGG | + | chr8_2:72752738-72752757 | None:intergenic | 35.0% | |
| GGACACTTAAAAAGATATCG+GGG | - | chr8_2:72752837-72752856 | Msa1267480:intron | 35.0% | |
| ! | CTATTTAGCATTTTTGTCGG+TGG | - | chr8_2:72752890-72752909 | Msa1267480:intron | 35.0% |
| !! | GGGGGGAAAGTATATTTTAA+GGG | + | chr8_2:72752966-72752985 | None:intergenic | 35.0% |
| ! | CAATAAAATGGTACCGAAAC+TGG | - | chr8_2:72753038-72753057 | Msa1267480:intron | 35.0% |
| TGTTGGATAGCGATAATTCA+AGG | + | chr8_2:72753080-72753099 | None:intergenic | 35.0% | |
| TGAAAGAAACTGATGCCTAA+AGG | + | chr8_2:72753126-72753145 | None:intergenic | 35.0% | |
| TTGGAAACGATAGGTAAGTA+GGG | + | chr8_2:72753159-72753178 | None:intergenic | 35.0% | |
| TTTGGAAACGATAGGTAAGT+AGG | + | chr8_2:72753160-72753179 | None:intergenic | 35.0% | |
| GAGATATCATACTCTCTACT+TGG | - | chr8_2:72753317-72753336 | Msa1267480:intron | 35.0% | |
| ATTGCAATCTTCATTGACGT+TGG | + | chr8_2:72753563-72753582 | None:intergenic | 35.0% | |
| ! | CATAGATGTGATTTGTGTTC+TGG | + | chr8_2:72753624-72753643 | None:intergenic | 35.0% |
| AGTAGGACTATTGAGGTTTA+TGG | + | chr8_2:72753784-72753803 | None:intergenic | 35.0% | |
| TCAAGTAAGTAGGACTATTG+AGG | + | chr8_2:72753791-72753810 | None:intergenic | 35.0% | |
| !!! | TTGATGTTTTGTTTCCACAC+TGG | + | chr8_2:72754144-72754163 | None:intergenic | 35.0% |
| GAGCTTATTGGACAAGAATT+TGG | + | chr8_2:72754179-72754198 | None:intergenic | 35.0% | |
| ACAAACTACTTGGATTTAGC+AGG | - | chr8_2:72754346-72754365 | Msa1267480:intron | 35.0% | |
| GATTTAGCAGGATCTTGAAT+TGG | - | chr8_2:72754358-72754377 | Msa1267480:intron | 35.0% | |
| AATTGGCCAAGACTTTATTG+AGG | - | chr8_2:72754375-72754394 | Msa1267480:CDS | 35.0% | |
| AGTCAAGTCTTCCATAAAGA+GGG | + | chr8_2:72754408-72754427 | None:intergenic | 35.0% | |
| GCAAGATAACTTCTCTAAAC+AGG | - | chr8_2:72754430-72754449 | Msa1267480:CDS | 35.0% | |
| AACTTCTCTAAACAGGGTTA+TGG | - | chr8_2:72754437-72754456 | Msa1267480:CDS | 35.0% | |
| ACTTCTCTAAACAGGGTTAT+GGG | - | chr8_2:72754438-72754457 | Msa1267480:CDS | 35.0% | |
| ! | TTGCAAACAATAAAAGCACG+TGG | + | chr8_2:72754470-72754489 | None:intergenic | 35.0% |
| ATTGTTTGCAATGAAGACCT+TGG | - | chr8_2:72754479-72754498 | Msa1267480:CDS | 35.0% | |
| ! | CATCATTAATCCCAGCATTT+TGG | + | chr8_2:72754535-72754554 | None:intergenic | 35.0% |
| GAGAAACTTTATTGTAGAGG+TGG | - | chr8_2:72754731-72754750 | Msa1267480:exon | 35.0% | |
| ! | TTTAGAATCTGCTGGTCATG+TGG | - | chr8_2:72751554-72751573 | Msa1267480:CDS | 40.0% |
| ATTCTTGACCTTTCAGCTTC+TGG | - | chr8_2:72751582-72751601 | Msa1267480:CDS | 40.0% | |
| ATTCTTGTGGGTCATAGTCT+TGG | - | chr8_2:72751702-72751721 | Msa1267480:CDS | 40.0% | |
| ACTTAGCATAGCTCTTGCAA+TGG | - | chr8_2:72751728-72751747 | Msa1267480:CDS | 40.0% | |
| TTTCCAGAAAAGGTTGCTGT+TGG | - | chr8_2:72751756-72751775 | Msa1267480:CDS | 40.0% | |
| !! | GAAGCATTGTGTTGAATGTC+CGG | + | chr8_2:72751804-72751823 | None:intergenic | 40.0% |
| CTTCAATATCAAGCACGCAA+TGG | + | chr8_2:72752408-72752427 | None:intergenic | 40.0% | |
| CGTGCTTGATATTGAAGATG+CGG | - | chr8_2:72752411-72752430 | Msa1267480:intron | 40.0% | |
| GGACTGAATTTCCATTTGTG+TGG | - | chr8_2:72752503-72752522 | Msa1267480:intron | 40.0% | |
| TTTAACCCAGACAATGGTTG+TGG | - | chr8_2:72752556-72752575 | Msa1267480:intron | 40.0% | |
| !! | GGGGGGGAAAGTATATTTTA+AGG | + | chr8_2:72752967-72752986 | None:intergenic | 40.0% |
| GTGGAGTAACACACATTTGT+TGG | + | chr8_2:72753097-72753116 | None:intergenic | 40.0% | |
| TTACTCCACAGTTCACCTTT+AGG | - | chr8_2:72753108-72753127 | Msa1267480:intron | 40.0% | |
| !!! | ATGGTTTTTTCGAACCTTGC+AGG | + | chr8_2:72753765-72753784 | None:intergenic | 40.0% |
| !! | GGAGTGTTGATAGAGCTTAT+TGG | + | chr8_2:72754191-72754210 | None:intergenic | 40.0% |
| TTAACGTGTAGTTACCTCAG+TGG | + | chr8_2:72754215-72754234 | None:intergenic | 40.0% | |
| GAGTCAAGTCTTCCATAAAG+AGG | + | chr8_2:72754409-72754428 | None:intergenic | 40.0% | |
| ACTGGATGATCCAAAATGCT+GGG | - | chr8_2:72754522-72754541 | Msa1267480:CDS | 40.0% | |
| ! | AAGCCACGTTTAGAATCTGC+TGG | - | chr8_2:72751546-72751565 | Msa1267480:exon | 45.0% |
| TGACCAGCAGATTCTAAACG+TGG | + | chr8_2:72751552-72751571 | None:intergenic | 45.0% | |
| ! | AGTTGGTTCCAGAAGCTGAA+AGG | + | chr8_2:72751593-72751612 | None:intergenic | 45.0% |
| ! | GTGGCCATTAGCTTCAACAA+TGG | + | chr8_2:72751660-72751679 | None:intergenic | 45.0% |
| ! | ACACCAACAGCAACCTTTTC+TGG | + | chr8_2:72751762-72751781 | None:intergenic | 45.0% |
| ! | GTGTTTCTGAGTATTCACGG+TGG | + | chr8_2:72752123-72752142 | None:intergenic | 45.0% |
| ATAACCTGACCCTAGAGACA+TGG | - | chr8_2:72752581-72752600 | Msa1267480:intron | 45.0% | |
| !! | AAAACCATGTCTCTAGGGTC+AGG | + | chr8_2:72752588-72752607 | None:intergenic | 45.0% |
| TTACCAGTGAGGGAAGAAGA+TGG | - | chr8_2:72752609-72752628 | Msa1267480:intron | 45.0% | |
| TGGTTGTGATCCAGTGTAGA+CGG | - | chr8_2:72752629-72752648 | Msa1267480:intron | 45.0% | |
| TTGTTGTACACCGTCTACAC+TGG | + | chr8_2:72752642-72752661 | None:intergenic | 45.0% | |
| !! | AGCATTTTTGTCGGTGGGTT+AGG | - | chr8_2:72752896-72752915 | Msa1267480:intron | 45.0% |
| TGATGCCTAAAGGTGAACTG+TGG | + | chr8_2:72753116-72753135 | None:intergenic | 45.0% | |
| !! | GTATATTGAGAGTACCCCGA+CGG | - | chr8_2:72754093-72754112 | Msa1267480:intron | 45.0% |
| CCAAGACTTTATTGAGGCCA+GGG | - | chr8_2:72754381-72754400 | Msa1267480:CDS | 45.0% | |
| CACTGGATGATCCAAAATGC+TGG | - | chr8_2:72754521-72754540 | Msa1267480:CDS | 45.0% | |
| GATCAAAGGGGCAGATCATA+TGG | - | chr8_2:72754562-72754581 | Msa1267480:CDS | 45.0% | |
| !!! | AAATTATTCTTTAAAAAAAT+CGG | + | chr8_2:72752787-72752806 | None:intergenic | 5.0% |
| !!! | TAAATTTTGTTATAAAAAAA+TGG | + | chr8_2:72753498-72753517 | None:intergenic | 5.0% |
| CTTGTACATGGTGCTTGCCA+TGG | - | chr8_2:72751501-72751520 | Msa1267480:three_prime_UTR | 50.0% | |
| TGTACCAACTCCAAGCACCA+TGG | + | chr8_2:72751521-72751540 | None:intergenic | 50.0% | |
| !! | TGGTGCTTGGAGTTGGTACA+AGG | - | chr8_2:72751521-72751540 | Msa1267480:three_prime_UTR | 50.0% |
| ! | CTTGTGGGTCATAGTCTTGG+AGG | - | chr8_2:72751705-72751724 | Msa1267480:CDS | 50.0% |
| !! | TGTAGGTGGATTCTAGGGTG+AGG | - | chr8_2:72751969-72751988 | Msa1267480:intron | 50.0% |
| !! | GTAGGTGGATTCTAGGGTGA+GGG | - | chr8_2:72751970-72751989 | Msa1267480:intron | 50.0% |
| GGCTCTATTAAGTCCCTCAC+CGG | - | chr8_2:72751991-72752010 | Msa1267480:CDS | 50.0% | |
| TCTATTAAGTCCCTCACCGG+TGG | - | chr8_2:72751994-72752013 | Msa1267480:CDS | 50.0% | |
| !! | GGTTAAGTTGAGTGGTCCAC+CGG | + | chr8_2:72752013-72752032 | None:intergenic | 50.0% |
| CACTCGTCCATCCACACAAA+TGG | + | chr8_2:72752517-72752536 | None:intergenic | 50.0% | |
| CAACCATCTTCTTCCCTCAC+TGG | + | chr8_2:72752615-72752634 | None:intergenic | 50.0% | |
| GCCTCTTAATAGTGCTCCAC+CGG | - | chr8_2:72752688-72752707 | Msa1267480:intron | 50.0% | |
| ! | ACCGGTGGAGCACTATTAAG+AGG | + | chr8_2:72752692-72752711 | None:intergenic | 50.0% |
| TTAATAGTGCTCCACCGGTG+AGG | - | chr8_2:72752693-72752712 | Msa1267480:intron | 50.0% | |
| TAATAGTGCTCCACCGGTGA+GGG | - | chr8_2:72752694-72752713 | Msa1267480:intron | 50.0% | |
| GGTCCAATTAAGTCCCTCAC+CGG | + | chr8_2:72752710-72752729 | None:intergenic | 50.0% | |
| ! | ATTGGTGGAGTCTAGGGTGA+GGG | + | chr8_2:72752731-72752750 | None:intergenic | 50.0% |
| ! | AATTGGTGGAGTCTAGGGTG+AGG | + | chr8_2:72752732-72752751 | None:intergenic | 50.0% |
| GGAGAAACACATCTCCTGCA+AGG | - | chr8_2:72753748-72753767 | Msa1267480:intron | 50.0% | |
| GACACTGAATTCTGCCAGTG+TGG | - | chr8_2:72754127-72754146 | Msa1267480:intron | 50.0% | |
| CTATCAACACTCCTCCACTG+AGG | - | chr8_2:72754198-72754217 | Msa1267480:intron | 50.0% | |
| ACGTGTAGTTACCTCAGTGG+AGG | + | chr8_2:72754212-72754231 | None:intergenic | 50.0% | |
| GCCAAGACTTTATTGAGGCC+AGG | - | chr8_2:72754380-72754399 | Msa1267480:CDS | 50.0% | |
| CCCTGGCCTCAATAAAGTCT+TGG | + | chr8_2:72754384-72754403 | None:intergenic | 50.0% | |
| TCTTCCATAAAGAGGGACCC+TGG | + | chr8_2:72754401-72754420 | None:intergenic | 50.0% | |
| ATGGTGCTTGCCATGGTGCT+TGG | - | chr8_2:72751508-72751527 | Msa1267480:three_prime_UTR | 55.0% | |
| CTTGCCATGGTGCTTGGAGT+TGG | - | chr8_2:72751514-72751533 | Msa1267480:three_prime_UTR | 55.0% | |
| CCAATTAAGTCCCTCACCGG+TGG | + | chr8_2:72752707-72752726 | None:intergenic | 55.0% | |
| CCACCGGTGAGGGACTTAAT+TGG | - | chr8_2:72752704-72752723 | Msa1267480:intron | 55.0% | |
| TGTCCAACCATTCAGCCGTC+GGG | + | chr8_2:72754111-72754130 | None:intergenic | 55.0% | |
| GTGTCCAACCATTCAGCCGT+CGG | + | chr8_2:72754112-72754131 | None:intergenic | 55.0% | |
| GTTGAGTGGTCCACCGGTGA+GGG | + | chr8_2:72752007-72752026 | None:intergenic | 60.0% | |
| AGTTGAGTGGTCCACCGGTG+AGG | + | chr8_2:72752008-72752027 | None:intergenic | 60.0% | |
| ! | AGAGTACCCCGACGGCTGAA+TGG | - | chr8_2:72754101-72754120 | Msa1267480:intron | 60.0% |
| TACCCCGACGGCTGAATGGT+TGG | - | chr8_2:72754105-72754124 | Msa1267480:intron | 60.0% | |
| GTCCAACCATTCAGCCGTCG+GGG | + | chr8_2:72754110-72754129 | None:intergenic | 60.0% | |
| GAGGCCAGGGTCCCTCTTTA+TGG | - | chr8_2:72754394-72754413 | Msa1267480:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 72751418 | 72754785 | 72751418 | ID=Msa1267480;Name=Msa1267480 |
| chr8_2 | mRNA | 72751418 | 72754785 | 72751418 | ID=Msa1267480-mRNA-1;Parent=Msa1267480;Name=Msa1267480-mRNA-1;_AED=0.09;_eAED=0.09;_QI=44|1|1|1|1|1|3|136|261 |
| chr8_2 | exon | 72751418 | 72751835 | 72751418 | ID=Msa1267480-mRNA-1:exon:24660;Parent=Msa1267480-mRNA-1 |
| chr8_2 | exon | 72751984 | 72752109 | 72751984 | ID=Msa1267480-mRNA-1:exon:24659;Parent=Msa1267480-mRNA-1 |
| chr8_2 | exon | 72754364 | 72754785 | 72754364 | ID=Msa1267480-mRNA-1:exon:24658;Parent=Msa1267480-mRNA-1 |
| chr8_2 | five_prime_UTR | 72754742 | 72754785 | 72754742 | ID=Msa1267480-mRNA-1:five_prime_utr;Parent=Msa1267480-mRNA-1 |
| chr8_2 | CDS | 72754364 | 72754741 | 72754364 | ID=Msa1267480-mRNA-1:cds;Parent=Msa1267480-mRNA-1 |
| chr8_2 | CDS | 72751984 | 72752109 | 72751984 | ID=Msa1267480-mRNA-1:cds;Parent=Msa1267480-mRNA-1 |
| chr8_2 | CDS | 72751554 | 72751835 | 72751554 | ID=Msa1267480-mRNA-1:cds;Parent=Msa1267480-mRNA-1 |
| chr8_2 | three_prime_UTR | 72751418 | 72751553 | 72751418 | ID=Msa1267480-mRNA-1:three_prime_utr;Parent=Msa1267480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
