Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267510 | RHN42187.1 | 95.769 | 260 | 11 | 0 | 1 | 260 | 43 | 302 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267510 | sp|Q6RYA0|SABP2_TOBAC | 59.608 | 255 | 99 | 1 | 10 | 260 | 5 | 259 | 7.90e-114 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0082420 | Msa1267510 | 0.811641 | 6.325591e-51 | -8.615850e-47 |
| Msa0090510 | Msa1267510 | 0.802767 | 4.798865e-49 | -8.615850e-47 |
| Msa0641130 | Msa1267510 | 0.815573 | 8.624630e-52 | -8.615850e-47 |
| Msa0164910 | Msa1267510 | 0.808827 | 2.557223e-50 | -8.615850e-47 |
| Msa0213540 | Msa1267510 | 0.827692 | 1.359649e-54 | -8.615850e-47 |
| Msa1239620 | Msa1267510 | 0.815603 | 8.494638e-52 | -8.615850e-47 |
| Msa1267480 | Msa1267510 | 0.999391 | 5.046581e-308 | -8.615850e-47 |
| Msa1267510 | Msa1305180 | 0.963501 | 3.668678e-122 | -8.615850e-47 |
| Msa1267510 | Msa1305330 | 0.965411 | 1.433393e-124 | -8.615850e-47 |
| Msa1013070 | Msa1267510 | 0.814030 | 1.895600e-51 | -8.615850e-47 |
| Msa1062040 | Msa1267510 | 0.811540 | 6.652083e-51 | -8.615850e-47 |
| Msa1094280 | Msa1267510 | 0.829455 | 5.098050e-55 | -8.615850e-47 |
| Msa0331020 | Msa1267510 | 0.841782 | 3.855733e-58 | -8.615850e-47 |
| Msa1131230 | Msa1267510 | 0.957301 | 3.775892e-115 | -8.615850e-47 |
| Msa1203480 | Msa1267510 | 0.999300 | 1.153092e-301 | -8.615850e-47 |
| Msa0545050 | Msa1267510 | 0.817896 | 2.599535e-52 | -8.615850e-47 |
| Msa0600590 | Msa1267510 | 0.811662 | 6.259010e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267510 | MtrunA17_Chr8g0374141 | 95.769 | 260 | 11 | 0 | 1 | 260 | 43 | 302 | 0.0 | 526 |
| Msa1267510 | MtrunA17_Chr5g0402901 | 62.302 | 252 | 95 | 0 | 9 | 260 | 10 | 261 | 2.11e-116 | 334 |
| Msa1267510 | MtrunA17_Chr5g0402881 | 57.854 | 261 | 109 | 1 | 1 | 260 | 18 | 278 | 9.10e-109 | 315 |
| Msa1267510 | MtrunA17_Chr5g0402851 | 42.912 | 261 | 144 | 2 | 5 | 260 | 2 | 262 | 1.54e-73 | 225 |
| Msa1267510 | MtrunA17_Chr5g0402871 | 45.525 | 257 | 131 | 4 | 11 | 260 | 5 | 259 | 7.18e-73 | 223 |
| Msa1267510 | MtrunA17_Chr8g0336391 | 43.191 | 257 | 137 | 5 | 11 | 260 | 27 | 281 | 1.25e-68 | 213 |
| Msa1267510 | MtrunA17_Chr3g0104871 | 41.634 | 257 | 140 | 4 | 10 | 260 | 18 | 270 | 2.93e-66 | 207 |
| Msa1267510 | MtrunA17_Chr5g0402841 | 40.856 | 257 | 146 | 3 | 9 | 260 | 6 | 261 | 3.00e-65 | 204 |
| Msa1267510 | MtrunA17_Chr8g0336441 | 42.023 | 257 | 139 | 5 | 10 | 260 | 26 | 278 | 5.60e-63 | 199 |
| Msa1267510 | MtrunA17_Chr8g0336411 | 41.699 | 259 | 139 | 5 | 10 | 260 | 27 | 281 | 6.28e-62 | 196 |
| Msa1267510 | MtrunA17_Chr8g0336381 | 40.385 | 260 | 145 | 5 | 9 | 260 | 5 | 262 | 2.94e-60 | 191 |
| Msa1267510 | MtrunA17_Chr8g0336401 | 38.996 | 259 | 150 | 5 | 10 | 260 | 26 | 284 | 7.49e-59 | 188 |
| Msa1267510 | MtrunA17_Chr7g0219561 | 33.730 | 252 | 158 | 3 | 11 | 257 | 124 | 371 | 2.58e-37 | 135 |
| Msa1267510 | MtrunA17_Chr3g0077351 | 33.077 | 260 | 158 | 5 | 7 | 257 | 90 | 342 | 1.60e-36 | 132 |
| Msa1267510 | MtrunA17_Chr3g0128581 | 32.927 | 246 | 153 | 5 | 7 | 246 | 32 | 271 | 3.79e-34 | 124 |
| Msa1267510 | MtrunA17_Chr5g0428471 | 31.395 | 258 | 166 | 4 | 9 | 260 | 28 | 280 | 3.80e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267510 | AT2G23620.1 | 54.086 | 257 | 114 | 2 | 9 | 261 | 7 | 263 | 3.05e-102 | 298 |
| Msa1267510 | AT2G23610.1 | 52.734 | 256 | 117 | 3 | 9 | 260 | 7 | 262 | 4.58e-94 | 278 |
| Msa1267510 | AT2G23600.1 | 52.964 | 253 | 115 | 2 | 9 | 257 | 7 | 259 | 5.34e-94 | 277 |
| Msa1267510 | AT2G23600.2 | 52.964 | 253 | 115 | 2 | 9 | 257 | 22 | 274 | 5.79e-94 | 278 |
| Msa1267510 | AT2G23590.1 | 47.638 | 254 | 128 | 1 | 7 | 260 | 23 | 271 | 1.23e-88 | 264 |
| Msa1267510 | AT4G37150.1 | 48.627 | 255 | 126 | 2 | 10 | 260 | 2 | 255 | 6.40e-88 | 262 |
| Msa1267510 | AT2G23580.1 | 49.805 | 257 | 124 | 2 | 9 | 260 | 6 | 262 | 1.04e-87 | 261 |
| Msa1267510 | AT5G10300.1 | 49.027 | 257 | 125 | 2 | 9 | 261 | 4 | 258 | 9.07e-87 | 259 |
| Msa1267510 | AT2G23550.1 | 48.638 | 257 | 127 | 2 | 9 | 260 | 6 | 262 | 1.38e-83 | 251 |
| Msa1267510 | AT2G23550.4 | 48.638 | 257 | 127 | 2 | 9 | 260 | 13 | 269 | 1.67e-83 | 251 |
| Msa1267510 | AT2G23560.1 | 46.063 | 254 | 135 | 2 | 9 | 260 | 6 | 259 | 6.62e-80 | 241 |
| Msa1267510 | AT2G23610.2 | 46.640 | 253 | 92 | 2 | 9 | 260 | 7 | 217 | 1.13e-77 | 234 |
| Msa1267510 | AT3G50440.1 | 43.478 | 253 | 139 | 2 | 12 | 260 | 22 | 274 | 1.08e-72 | 224 |
| Msa1267510 | AT2G23550.2 | 45.312 | 256 | 108 | 2 | 9 | 260 | 6 | 233 | 8.81e-70 | 215 |
| Msa1267510 | AT2G23600.3 | 52.439 | 164 | 74 | 2 | 9 | 168 | 22 | 185 | 7.38e-59 | 185 |
| Msa1267510 | AT2G23570.1 | 48.315 | 178 | 88 | 1 | 87 | 260 | 1 | 178 | 6.79e-53 | 170 |
| Msa1267510 | AT2G23580.2 | 48.045 | 179 | 85 | 3 | 9 | 182 | 6 | 181 | 9.62e-53 | 170 |
| Msa1267510 | AT2G23550.3 | 47.273 | 165 | 82 | 2 | 9 | 168 | 13 | 177 | 3.28e-50 | 164 |
| Msa1267510 | AT5G10300.2 | 47.590 | 166 | 81 | 2 | 9 | 170 | 4 | 167 | 2.05e-47 | 157 |
| Msa1267510 | AT4G37140.1 | 53.846 | 117 | 54 | 0 | 10 | 126 | 2 | 118 | 3.09e-45 | 149 |
| Msa1267510 | AT4G09900.1 | 33.074 | 257 | 156 | 5 | 10 | 257 | 97 | 346 | 1.84e-39 | 140 |
| Msa1267510 | AT1G26360.1 | 32.669 | 251 | 164 | 2 | 10 | 257 | 188 | 436 | 4.38e-39 | 141 |
| Msa1267510 | AT1G33990.1 | 32.443 | 262 | 164 | 5 | 3 | 257 | 90 | 345 | 5.01e-39 | 139 |
| Msa1267510 | AT3G29770.1 | 35.294 | 255 | 150 | 5 | 11 | 257 | 138 | 385 | 1.65e-37 | 136 |
| Msa1267510 | AT5G58310.1 | 32.700 | 263 | 160 | 5 | 7 | 257 | 1 | 258 | 2.58e-37 | 132 |
| Msa1267510 | AT4G37140.2 | 58.242 | 91 | 38 | 0 | 10 | 100 | 2 | 92 | 4.44e-37 | 127 |
| Msa1267510 | AT1G69240.1 | 31.518 | 257 | 161 | 6 | 10 | 257 | 186 | 436 | 1.73e-36 | 134 |
| Msa1267510 | AT4G16690.1 | 31.707 | 246 | 153 | 4 | 11 | 249 | 12 | 249 | 3.33e-33 | 122 |
| Msa1267510 | AT3G10870.1 | 30.738 | 244 | 157 | 5 | 11 | 246 | 20 | 259 | 9.26e-31 | 115 |
| Msa1267510 | AT3G29770.2 | 40.278 | 72 | 43 | 0 | 11 | 82 | 138 | 209 | 2.86e-12 | 65.5 |
Find 70 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCATTAATCCCAGCATTT+TGG | 0.157812 | 8_2:+72805598 | None:intergenic |
| GAGCTTATTGGACAAGAATT+TGG | 0.162838 | 8_2:+72805954 | None:intergenic |
| GAGGCCAGGGTCCCTCTTTA+TGG | 0.202954 | 8_2:-72805736 | Msa1267510:CDS |
| ATTCTTGACCTTTCAGCTTC+TGG | 0.238179 | 8_2:-72808536 | Msa1267510:CDS |
| AACAAAACATCAATGTTCTT+TGG | 0.296879 | 8_2:-72805979 | Msa1267510:CDS |
| GCAAGATAACTTCTCTAAAC+AGG | 0.300900 | 8_2:-72805700 | Msa1267510:CDS |
| ACATGCTGATTCCTTTATTT+CGG | 0.312733 | 8_2:+72805432 | None:intergenic |
| TGAAGTTTAGCTTAATTTGT+TGG | 0.339405 | 8_2:-72805475 | Msa1267510:three_prime_UTR |
| AGCTTATTGGACAAGAATTT+GGG | 0.339872 | 8_2:+72805955 | None:intergenic |
| AACTTCTCTAAACAGGGTTA+TGG | 0.360676 | 8_2:-72805693 | Msa1267510:CDS |
| GGAGTGTTGATAGAGCTTAT+TGG | 0.392660 | 8_2:+72805942 | None:intergenic |
| ACTTCTCTAAACAGGGTTAT+GGG | 0.399672 | 8_2:-72805692 | Msa1267510:CDS |
| AATGGAACAATTTCCAGAAA+AGG | 0.417631 | 8_2:-72808372 | Msa1267510:CDS |
| ATTCTTGTGGGTCATAGTCT+TGG | 0.418009 | 8_2:-72808416 | Msa1267510:CDS |
| ATCCAGTGTTGAAATTTCAA+TGG | 0.421026 | 8_2:+72805624 | None:intergenic |
| GATTTAGCAGGATCTTGAAT+TGG | 0.423617 | 8_2:-72805772 | Msa1267510:intron |
| TGAACCATTGTTGAAGCTAA+TGG | 0.426644 | 8_2:-72808465 | Msa1267510:CDS |
| ATCTTCAAGTTTCTTCAAGT+TGG | 0.431463 | 8_2:+72808511 | None:intergenic |
| GTGCACAAAATTTAATTGCT+AGG | 0.449601 | 8_2:-72808652 | Msa1267510:CDS |
| TGCTTCTTATGTCATGGAAA+AGG | 0.451368 | 8_2:-72808300 | Msa1267510:intron |
| CACTGGATGATCCAAAATGC+TGG | 0.456893 | 8_2:-72805609 | Msa1267510:CDS |
| GATCAAAGGGGCAGATCATA+TGG | 0.460208 | 8_2:-72805568 | Msa1267510:CDS |
| TGTCCAACCATTCAGCCGTC+GGG | 0.460887 | 8_2:+72806022 | None:intergenic |
| ATGATGTATATGAGATCAAA+GGG | 0.461047 | 8_2:-72805581 | Msa1267510:CDS |
| CTTGTGGGTCATAGTCTTGG+AGG | 0.464347 | 8_2:-72808413 | Msa1267510:CDS |
| ATGGTGCTTGCCATGGTGCT+TGG | 0.470545 | 8_2:-72808610 | Msa1267510:CDS |
| TTCCATTGAAATTTCAACAC+TGG | 0.470781 | 8_2:-72805626 | Msa1267510:CDS |
| GCCAAGACTTTATTGAGGCC+AGG | 0.472046 | 8_2:-72805750 | Msa1267510:CDS |
| CACAATTCCACCAAATGAAA+AGG | 0.475812 | 8_2:-72808441 | Msa1267510:CDS |
| CTTGCCATGGTGCTTGGAGT+TGG | 0.476673 | 8_2:-72808604 | Msa1267510:CDS |
| GAAGCATTGTGTTGAATGTC+CGG | 0.482394 | 8_2:+72808317 | None:intergenic |
| CCCTGGCCTCAATAAAGTCT+TGG | 0.486588 | 8_2:+72805749 | None:intergenic |
| ACACAATGCTTCTTATGTCA+TGG | 0.491092 | 8_2:-72808306 | Msa1267510:CDS |
| AATGAAAAGGTGATTCTTGT+GGG | 0.497441 | 8_2:-72808428 | Msa1267510:CDS |
| CTTGTACATGGTGCTTGCCA+TGG | 0.498303 | 8_2:-72808617 | Msa1267510:CDS |
| CATAATGATTATTGTTGTTG+TGG | 0.503508 | 8_2:+72808676 | None:intergenic |
| TACCCCGACGGCTGAATGGT+TGG | 0.505808 | 8_2:-72806025 | Msa1267510:CDS |
| AGAGTACCCCGACGGCTGAA+TGG | 0.512702 | 8_2:-72806029 | Msa1267510:CDS |
| ATTGTTTGCAATGAAGACCT+TGG | 0.520269 | 8_2:-72805651 | Msa1267510:CDS |
| AGAGAATTACATAGTTCTTG+TGG | 0.522605 | 8_2:+72805531 | None:intergenic |
| CCAAGACTTTATTGAGGCCA+GGG | 0.522924 | 8_2:-72805749 | Msa1267510:CDS |
| GAAATTTCAATGGAATTCCA+AGG | 0.525367 | 8_2:+72805634 | None:intergenic |
| GTGTCCAACCATTCAGCCGT+CGG | 0.529692 | 8_2:+72806021 | None:intergenic |
| AAGCATTATGTTCTTGTACA+TGG | 0.531450 | 8_2:-72808629 | Msa1267510:CDS |
| TTTCCAGAAAAGGTTGCTGT+TGG | 0.543459 | 8_2:-72808362 | Msa1267510:CDS |
| AATGATGTATATGAGATCAA+AGG | 0.543714 | 8_2:-72805582 | Msa1267510:CDS |
| GAGAAACTTTATTGTAGAGG+TGG | 0.543747 | 8_2:-72805399 | Msa1267510:three_prime_UTR |
| AAATGAAAAGGTGATTCTTG+TGG | 0.544198 | 8_2:-72808429 | Msa1267510:CDS |
| AATTGGCCAAGACTTTATTG+AGG | 0.557607 | 8_2:-72805755 | Msa1267510:CDS |
| TGTGAGAAACTTTATTGTAG+AGG | 0.558702 | 8_2:-72805402 | Msa1267510:three_prime_UTR |
| TGGTGCTTGGAGTTGGTACA+AGG | 0.561033 | 8_2:-72808597 | Msa1267510:CDS |
| GTGGCCATTAGCTTCAACAA+TGG | 0.573860 | 8_2:+72808461 | None:intergenic |
| GAGTCAAGTCTTCCATAAAG+AGG | 0.579389 | 8_2:+72805724 | None:intergenic |
| AGTTGGTTCCAGAAGCTGAA+AGG | 0.584796 | 8_2:+72808528 | None:intergenic |
| AAGCCACGTTTAGAATCTGC+TGG | 0.586149 | 8_2:-72808572 | Msa1267510:CDS |
| ACTGGATGATCCAAAATGCT+GGG | 0.589459 | 8_2:-72805608 | Msa1267510:CDS |
| CAAGATAACTTCTCTAAACA+GGG | 0.605122 | 8_2:-72805699 | Msa1267510:CDS |
| ACTTAGCATAGCTCTTGCAA+TGG | 0.605259 | 8_2:-72808390 | Msa1267510:CDS |
| AGTCAAGTCTTCCATAAAGA+GGG | 0.612508 | 8_2:+72805725 | None:intergenic |
| TTTAGAATCTGCTGGTCATG+TGG | 0.623515 | 8_2:-72808564 | Msa1267510:CDS |
| GACACTGAATTCTGCCAGTG+TGG | 0.627184 | 8_2:-72806003 | Msa1267510:CDS |
| TCTTCCATAAAGAGGGACCC+TGG | 0.632528 | 8_2:+72805732 | None:intergenic |
| GTCCAACCATTCAGCCGTCG+GGG | 0.648788 | 8_2:+72806023 | None:intergenic |
| ACGTGTAGTTACCTCAGTGG+AGG | 0.650895 | 8_2:+72805921 | None:intergenic |
| TTAACGTGTAGTTACCTCAG+TGG | 0.666283 | 8_2:+72805918 | None:intergenic |
| TTGCAAACAATAAAAGCACG+TGG | 0.692906 | 8_2:+72805663 | None:intergenic |
| TGTACCAACTCCAAGCACCA+TGG | 0.696634 | 8_2:+72808600 | None:intergenic |
| TGACCAGCAGATTCTAAACG+TGG | 0.719220 | 8_2:+72808569 | None:intergenic |
| TGATGTATATGAGATCAAAG+GGG | 0.769291 | 8_2:-72805580 | Msa1267510:CDS |
| CTATCAACACTCCTCCACTG+AGG | 0.776664 | 8_2:-72805932 | Msa1267510:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAGTCTTATTTAATTTAA+CGG | + | chr8_2:72805981-72806000 | None:intergenic | 10.0% |
| !! | ATATAATAAAACATAAAAAG+GGG | + | chr8_2:72806928-72806947 | None:intergenic | 10.0% |
| !! | CATATAATAAAACATAAAAA+GGG | + | chr8_2:72806929-72806948 | None:intergenic | 10.0% |
| !! | ACATATAATAAAACATAAAA+AGG | + | chr8_2:72806930-72806949 | None:intergenic | 10.0% |
| !!! | AAATACATTTTATTCATTTA+TGG | + | chr8_2:72807291-72807310 | None:intergenic | 10.0% |
| !!! | CATAATAAGTAATTTTTATT+TGG | + | chr8_2:72807375-72807394 | None:intergenic | 10.0% |
| !! | TTTATAACAAAATTTAGATT+AGG | - | chr8_2:72807444-72807463 | Msa1267510:intron | 10.0% |
| !! | TTATAACAAAATTTAGATTA+GGG | - | chr8_2:72807445-72807464 | Msa1267510:intron | 10.0% |
| !! | ACAAAAAATAAGATTAATAA+TGG | + | chr8_2:72807997-72808016 | None:intergenic | 10.0% |
| !!! | TAGTTTTTATGAAATTTTGT+AGG | - | chr8_2:72805899-72805918 | Msa1267510:intron | 15.0% |
| !! | GAAAATAAATTAAAAAGTTG+TGG | + | chr8_2:72806115-72806134 | None:intergenic | 15.0% |
| !! | TTACTTCAGAAAATAATATA+AGG | + | chr8_2:72806306-72806325 | None:intergenic | 15.0% |
| !!! | GAATTTGTAAAATTTTGTTA+TGG | - | chr8_2:72806418-72806437 | Msa1267510:intron | 15.0% |
| !! | ATACATTTAGTATACAAAAT+TGG | + | chr8_2:72806692-72806711 | None:intergenic | 15.0% |
| !! | TATAATAAAACATAAAAAGG+GGG | + | chr8_2:72806927-72806946 | None:intergenic | 15.0% |
| !! | ATCCATTTGTTTATAAATAT+AGG | - | chr8_2:72807627-72807646 | Msa1267510:intron | 15.0% |
| !! | ATCCTATATTTATAAACAAA+TGG | + | chr8_2:72807632-72807651 | None:intergenic | 15.0% |
| !! | TCACAAATATGATTTCTATA+TGG | - | chr8_2:72805855-72805874 | Msa1267510:intron | 20.0% |
| !!! | TTTTTATGAAATTTTGTAGG+TGG | - | chr8_2:72805902-72805921 | Msa1267510:intron | 20.0% |
| !!! | TTTTCCATTTTTTTTGTCAA+TGG | + | chr8_2:72806258-72806277 | None:intergenic | 20.0% |
| !!! | TGGAAAATTTGAGTTATAAA+AGG | + | chr8_2:72806332-72806351 | None:intergenic | 20.0% |
| !!! | TAACTATTTAGCATTTTTGT+CGG | - | chr8_2:72806830-72806849 | Msa1267510:intron | 20.0% |
| !! | ATAATAAAACATAAAAAGGG+GGG | + | chr8_2:72806926-72806945 | None:intergenic | 20.0% |
| !! | ATTTGTCCTTTACAATAAAA+TGG | - | chr8_2:72806968-72806987 | Msa1267510:intron | 20.0% |
| !!! | AGTTAAATTCTTGATACTTT+TGG | + | chr8_2:72807120-72807139 | None:intergenic | 20.0% |
| !! | TCATACAAGAAAAATAGATT+AGG | - | chr8_2:72807667-72807686 | Msa1267510:intron | 20.0% |
| !! | TGACAATTAAAAAGTAATGA+AGG | + | chr8_2:72807847-72807866 | None:intergenic | 20.0% |
| !!! | AATTTTAAAACGACAAGTAA+GGG | + | chr8_2:72807920-72807939 | None:intergenic | 20.0% |
| !! | CATTAATTATTGAAGAGATA+TGG | - | chr8_2:72807948-72807967 | Msa1267510:intron | 20.0% |
| !! | TTGAAGTTTCCATTAAAAAA+TGG | - | chr8_2:72808235-72808254 | Msa1267510:intron | 20.0% |
| !!! | AATTGTACTCCATTTTTTAA+TGG | + | chr8_2:72808247-72808266 | None:intergenic | 20.0% |
| !! | CATAATGATTATTGTTGTTG+TGG | + | chr8_2:72805395-72805414 | None:intergenic | 25.0% |
| ! | TCAATGGTGATATTTATTGT+GGG | + | chr8_2:72806242-72806261 | None:intergenic | 25.0% |
| ! | ATCACCATTGACAAAAAAAA+TGG | - | chr8_2:72806251-72806270 | Msa1267510:intron | 25.0% |
| !!! | AAAATTTTGTTATGGAACGA+AGG | - | chr8_2:72806426-72806445 | Msa1267510:intron | 25.0% |
| ! | CATTTAGTATACAAAATTGG+TGG | + | chr8_2:72806689-72806708 | None:intergenic | 25.0% |
| ! | GAAGAACATGTAATAGAAAA+GGG | + | chr8_2:72806884-72806903 | None:intergenic | 25.0% |
| ! | AGAAGAACATGTAATAGAAA+AGG | + | chr8_2:72806885-72806904 | None:intergenic | 25.0% |
| !! | TTCCTCTTAATTTGAATTTG+TGG | - | chr8_2:72807413-72807432 | Msa1267510:intron | 25.0% |
| ! | ATATAAAACGACAAGTAAGT+AGG | + | chr8_2:72807785-72807804 | None:intergenic | 25.0% |
| !! | TCTAAGACAATTAAGTAAAC+TGG | + | chr8_2:72807886-72807905 | None:intergenic | 25.0% |
| !!! | GAATTTTAAAACGACAAGTA+AGG | + | chr8_2:72807921-72807940 | None:intergenic | 25.0% |
| ! | AACAAAACATCAATGTTCTT+TGG | - | chr8_2:72808089-72808108 | Msa1267510:intron | 25.0% |
| ! | ACTAATAAAGACAAACTACT+TGG | - | chr8_2:72808274-72808293 | Msa1267510:intron | 25.0% |
| ! | AATGATGTATATGAGATCAA+AGG | - | chr8_2:72808486-72808505 | Msa1267510:CDS | 25.0% |
| ! | ATGATGTATATGAGATCAAA+GGG | - | chr8_2:72808487-72808506 | Msa1267510:CDS | 25.0% |
| !!! | TGAAGTTTAGCTTAATTTGT+TGG | - | chr8_2:72808593-72808612 | Msa1267510:CDS | 25.0% |
| !!! | TTACTTTTTGTCCGAAATAA+AGG | - | chr8_2:72808625-72808644 | Msa1267510:CDS | 25.0% |
| GTGCACAAAATTTAATTGCT+AGG | - | chr8_2:72805416-72805435 | Msa1267510:three_prime_UTR | 30.0% | |
| AAGCATTATGTTCTTGTACA+TGG | - | chr8_2:72805439-72805458 | Msa1267510:three_prime_UTR | 30.0% | |
| ! | ATCTTCAAGTTTCTTCAAGT+TGG | + | chr8_2:72805560-72805579 | None:intergenic | 30.0% |
| ! | ACAAGAATCACCTTTTCATT+TGG | + | chr8_2:72805640-72805659 | None:intergenic | 30.0% |
| AAATGAAAAGGTGATTCTTG+TGG | - | chr8_2:72805639-72805658 | Msa1267510:CDS | 30.0% | |
| AATGAAAAGGTGATTCTTGT+GGG | - | chr8_2:72805640-72805659 | Msa1267510:CDS | 30.0% | |
| AATGGAACAATTTCCAGAAA+AGG | - | chr8_2:72805696-72805715 | Msa1267510:CDS | 30.0% | |
| ! | TTTCTTAACAGCTTTTATGC+CGG | - | chr8_2:72805732-72805751 | Msa1267510:CDS | 30.0% |
| !! | AAATTTTGTAGGTGGATTCT+AGG | - | chr8_2:72805910-72805929 | Msa1267510:intron | 30.0% |
| !! | AATTTTGTAGGTGGATTCTA+GGG | - | chr8_2:72805911-72805930 | Msa1267510:intron | 30.0% |
| !! | AATTTAACGGTTAAGTTGAG+TGG | + | chr8_2:72805968-72805987 | None:intergenic | 30.0% |
| GAAAGAACATTAATTCAGTG+TGG | + | chr8_2:72806024-72806043 | None:intergenic | 30.0% | |
| ATCGAGTACTTACATTAGAA+AGG | + | chr8_2:72806144-72806163 | None:intergenic | 30.0% | |
| TTCTAATGTAAGTACTCGAT+AGG | - | chr8_2:72806144-72806163 | Msa1267510:intron | 30.0% | |
| TTGACATGAGAAAGACATTA+TGG | + | chr8_2:72806211-72806230 | None:intergenic | 30.0% | |
| GTCAATGGTGATATTTATTG+TGG | + | chr8_2:72806243-72806262 | None:intergenic | 30.0% | |
| ! | TCAATTTTTAACCCAGACAA+TGG | - | chr8_2:72806493-72806512 | Msa1267510:intron | 30.0% |
| GTAAAAAAACCATGTCTCTA+GGG | + | chr8_2:72806536-72806555 | None:intergenic | 30.0% | |
| ! | AAATATTTACAGAGTGTCTC+AGG | - | chr8_2:72806759-72806778 | Msa1267510:intron | 30.0% |
| CAGGACACTTAAAAAGATAT+CGG | - | chr8_2:72806778-72806797 | Msa1267510:intron | 30.0% | |
| AGGACACTTAAAAAGATATC+GGG | - | chr8_2:72806779-72806798 | Msa1267510:intron | 30.0% | |
| ! | TATTTAGCATTTTTGTCGGT+GGG | - | chr8_2:72806834-72806853 | Msa1267510:intron | 30.0% |
| ! | TCGGTACCATTTTATTGTAA+AGG | + | chr8_2:72806977-72806996 | None:intergenic | 30.0% |
| AAAGCAAAACTTTCCAGTTT+CGG | + | chr8_2:72806996-72807015 | None:intergenic | 30.0% | |
| !! | TTGATACTTTTGGAAACGAT+AGG | + | chr8_2:72807110-72807129 | None:intergenic | 30.0% |
| ! | ATTCGTTCGAGTTTAAATTC+AGG | - | chr8_2:72807201-72807220 | Msa1267510:intron | 30.0% |
| GACCACAAATTCAAATTAAG+AGG | + | chr8_2:72807418-72807437 | None:intergenic | 30.0% | |
| GATTCTCTCAAACTTTACAT+GGG | + | chr8_2:72807481-72807500 | None:intergenic | 30.0% | |
| TGATTCTCTCAAACTTTACA+TGG | + | chr8_2:72807482-72807501 | None:intergenic | 30.0% | |
| TGCAGTTGACACAAATTAAA+AGG | + | chr8_2:72807600-72807619 | None:intergenic | 30.0% | |
| TGACTTGAATTCAAGTAAGT+AGG | + | chr8_2:72807741-72807760 | None:intergenic | 30.0% | |
| AATTGTCACATTTACACTTG+TGG | - | chr8_2:72807859-72807878 | Msa1267510:intron | 30.0% | |
| ATTGAAGAGATATGGAATTG+AGG | - | chr8_2:72807956-72807975 | Msa1267510:intron | 30.0% | |
| TTGAAGAGATATGGAATTGA+GGG | - | chr8_2:72807957-72807976 | Msa1267510:intron | 30.0% | |
| AGCTTATTGGACAAGAATTT+GGG | + | chr8_2:72808116-72808135 | None:intergenic | 30.0% | |
| TATAGTACTAGTATGAGACA+AGG | + | chr8_2:72808189-72808208 | None:intergenic | 30.0% | |
| CAAGATAACTTCTCTAAACA+GGG | - | chr8_2:72808369-72808388 | Msa1267510:CDS | 30.0% | |
| GAAATTTCAATGGAATTCCA+AGG | + | chr8_2:72808437-72808456 | None:intergenic | 30.0% | |
| TTCCATTGAAATTTCAACAC+TGG | - | chr8_2:72808442-72808461 | Msa1267510:CDS | 30.0% | |
| ! | ATCCAGTGTTGAAATTTCAA+TGG | + | chr8_2:72808447-72808466 | None:intergenic | 30.0% |
| TGATGTATATGAGATCAAAG+GGG | - | chr8_2:72808488-72808507 | Msa1267510:CDS | 30.0% | |
| AGAGAATTACATAGTTCTTG+TGG | + | chr8_2:72808540-72808559 | None:intergenic | 30.0% | |
| !! | ACATGCTGATTCCTTTATTT+CGG | + | chr8_2:72808639-72808658 | None:intergenic | 30.0% |
| TGTGAGAAACTTTATTGTAG+AGG | - | chr8_2:72808666-72808685 | Msa1267510:exon | 30.0% | |
| TGAACCATTGTTGAAGCTAA+TGG | - | chr8_2:72805603-72805622 | Msa1267510:CDS | 35.0% | |
| !! | CTTTTCATTTGGTGGAATTG+TGG | + | chr8_2:72805629-72805648 | None:intergenic | 35.0% |
| CACAATTCCACCAAATGAAA+AGG | - | chr8_2:72805627-72805646 | Msa1267510:CDS | 35.0% | |
| ! | AGAATCACCTTTTCATTTGG+TGG | + | chr8_2:72805637-72805656 | None:intergenic | 35.0% |
| ACACAATGCTTCTTATGTCA+TGG | - | chr8_2:72805762-72805781 | Msa1267510:CDS | 35.0% | |
| TGCTTCTTATGTCATGGAAA+AGG | - | chr8_2:72805768-72805787 | Msa1267510:intron | 35.0% | |
| AAGACTTATGCGATCTCATT+AGG | - | chr8_2:72805992-72806011 | Msa1267510:CDS | 35.0% | |
| ! | TCAGTGTTTCTGAGTATTCA+CGG | + | chr8_2:72806073-72806092 | None:intergenic | 35.0% |
| ACATGAGAAAGACATTATGG+AGG | + | chr8_2:72806208-72806227 | None:intergenic | 35.0% | |
| ATTTCACCATCGAAGCATAA+TGG | - | chr8_2:72806385-72806404 | Msa1267510:intron | 35.0% | |
| TTTCACCATCGAAGCATAAT+GGG | - | chr8_2:72806386-72806405 | Msa1267510:intron | 35.0% | |
| ! | TTTTTCCCATTATGCTTCGA+TGG | + | chr8_2:72806394-72806413 | None:intergenic | 35.0% |
| ! | GAAGCATAATGGGAAAAATC+TGG | - | chr8_2:72806396-72806415 | Msa1267510:intron | 35.0% |
| TGAATTTCCATTTGTGTGGA+TGG | - | chr8_2:72806451-72806470 | Msa1267510:intron | 35.0% | |
| TATTTCCACAACCATTGTCT+GGG | + | chr8_2:72806507-72806526 | None:intergenic | 35.0% | |
| TTATTTCCACAACCATTGTC+TGG | + | chr8_2:72806508-72806527 | None:intergenic | 35.0% | |
| GGTAAAAAAACCATGTCTCT+AGG | + | chr8_2:72806537-72806556 | None:intergenic | 35.0% | |
| !!! | ACATGGTTTTTTTACCAGTG+AGG | - | chr8_2:72806541-72806560 | Msa1267510:intron | 35.0% |
| !!! | CATGGTTTTTTTACCAGTGA+GGG | - | chr8_2:72806542-72806561 | Msa1267510:intron | 35.0% |
| TACAAAATTGGTGGAGTCTA+GGG | + | chr8_2:72806680-72806699 | None:intergenic | 35.0% | |
| ATACAAAATTGGTGGAGTCT+AGG | + | chr8_2:72806681-72806700 | None:intergenic | 35.0% | |
| GGACACTTAAAAAGATATCG+GGG | - | chr8_2:72806780-72806799 | Msa1267510:intron | 35.0% | |
| ! | CTATTTAGCATTTTTGTCGG+TGG | - | chr8_2:72806833-72806852 | Msa1267510:intron | 35.0% |
| !! | GGGGGGAAAGTATATTTTAA+GGG | + | chr8_2:72806909-72806928 | None:intergenic | 35.0% |
| !! | AGGGGGGAAAGTATATTTTA+AGG | + | chr8_2:72806910-72806929 | None:intergenic | 35.0% |
| ! | CAATAAAATGGTACCGAAAC+TGG | - | chr8_2:72806980-72806999 | Msa1267510:intron | 35.0% |
| TGTTGGATAGCGATAATTCA+AGG | + | chr8_2:72807022-72807041 | None:intergenic | 35.0% | |
| TGAAAGAAACTGATGCCTAA+AGG | + | chr8_2:72807068-72807087 | None:intergenic | 35.0% | |
| TTGGAAACGATAGGTAAGTA+GGG | + | chr8_2:72807101-72807120 | None:intergenic | 35.0% | |
| TTTGGAAACGATAGGTAAGT+AGG | + | chr8_2:72807102-72807121 | None:intergenic | 35.0% | |
| GAGATATCATACTCTCTACT+TGG | - | chr8_2:72807259-72807278 | Msa1267510:intron | 35.0% | |
| ATTGCAATCTTCATTGACGT+TGG | + | chr8_2:72807505-72807524 | None:intergenic | 35.0% | |
| ! | CATAGATGTGATTTGTGTTC+TGG | + | chr8_2:72807566-72807585 | None:intergenic | 35.0% |
| AGTAGGACTATTGAGGTTTA+TGG | + | chr8_2:72807724-72807743 | None:intergenic | 35.0% | |
| TCAAGTAAGTAGGACTATTG+AGG | + | chr8_2:72807731-72807750 | None:intergenic | 35.0% | |
| !!! | TTGATGTTTTGTTTCCACAC+TGG | + | chr8_2:72808082-72808101 | None:intergenic | 35.0% |
| GAGCTTATTGGACAAGAATT+TGG | + | chr8_2:72808117-72808136 | None:intergenic | 35.0% | |
| ACAAACTACTTGGATTTAGC+AGG | - | chr8_2:72808284-72808303 | Msa1267510:intron | 35.0% | |
| GATTTAGCAGGATCTTGAAT+TGG | - | chr8_2:72808296-72808315 | Msa1267510:intron | 35.0% | |
| AATTGGCCAAGACTTTATTG+AGG | - | chr8_2:72808313-72808332 | Msa1267510:CDS | 35.0% | |
| AGTCAAGTCTTCCATAAAGA+GGG | + | chr8_2:72808346-72808365 | None:intergenic | 35.0% | |
| GCAAGATAACTTCTCTAAAC+AGG | - | chr8_2:72808368-72808387 | Msa1267510:CDS | 35.0% | |
| AACTTCTCTAAACAGGGTTA+TGG | - | chr8_2:72808375-72808394 | Msa1267510:CDS | 35.0% | |
| ACTTCTCTAAACAGGGTTAT+GGG | - | chr8_2:72808376-72808395 | Msa1267510:CDS | 35.0% | |
| ! | TTGCAAACAATAAAAGCACG+TGG | + | chr8_2:72808408-72808427 | None:intergenic | 35.0% |
| ATTGTTTGCAATGAAGACCT+TGG | - | chr8_2:72808417-72808436 | Msa1267510:CDS | 35.0% | |
| ! | CATCATTAATCCCAGCATTT+TGG | + | chr8_2:72808473-72808492 | None:intergenic | 35.0% |
| GAGAAACTTTATTGTAGAGG+TGG | - | chr8_2:72808669-72808688 | Msa1267510:exon | 35.0% | |
| ! | TTTAGAATCTGCTGGTCATG+TGG | - | chr8_2:72805504-72805523 | Msa1267510:CDS | 40.0% |
| ATTCTTGACCTTTCAGCTTC+TGG | - | chr8_2:72805532-72805551 | Msa1267510:CDS | 40.0% | |
| ATTCTTGTGGGTCATAGTCT+TGG | - | chr8_2:72805652-72805671 | Msa1267510:CDS | 40.0% | |
| ACTTAGCATAGCTCTTGCAA+TGG | - | chr8_2:72805678-72805697 | Msa1267510:CDS | 40.0% | |
| TTTCCAGAAAAGGTTGCTGT+TGG | - | chr8_2:72805706-72805725 | Msa1267510:CDS | 40.0% | |
| !! | GAAGCATTGTGTTGAATGTC+CGG | + | chr8_2:72805754-72805773 | None:intergenic | 40.0% |
| AATGTAAGTACTCGATAGGC+TGG | - | chr8_2:72806148-72806167 | Msa1267510:intron | 40.0% | |
| CTTCAATATCAAGCACGCAA+TGG | + | chr8_2:72806352-72806371 | None:intergenic | 40.0% | |
| CGTGCTTGATATTGAAGATG+CGG | - | chr8_2:72806355-72806374 | Msa1267510:intron | 40.0% | |
| GGACTGAATTTCCATTTGTG+TGG | - | chr8_2:72806447-72806466 | Msa1267510:intron | 40.0% | |
| TTTAACCCAGACAATGGTTG+TGG | - | chr8_2:72806499-72806518 | Msa1267510:intron | 40.0% | |
| GTGGAGTAACACACATTTGT+TGG | + | chr8_2:72807039-72807058 | None:intergenic | 40.0% | |
| TTACTCCACAGTTCACCTTT+AGG | - | chr8_2:72807050-72807069 | Msa1267510:intron | 40.0% | |
| !!! | ATGGTTTTTTCGAACCTTGC+AGG | + | chr8_2:72807705-72807724 | None:intergenic | 40.0% |
| !! | GGAGTGTTGATAGAGCTTAT+TGG | + | chr8_2:72808129-72808148 | None:intergenic | 40.0% |
| TTAACGTGTAGTTACCTCAG+TGG | + | chr8_2:72808153-72808172 | None:intergenic | 40.0% | |
| GAGTCAAGTCTTCCATAAAG+AGG | + | chr8_2:72808347-72808366 | None:intergenic | 40.0% | |
| ACTGGATGATCCAAAATGCT+GGG | - | chr8_2:72808460-72808479 | Msa1267510:CDS | 40.0% | |
| ! | AAGCCACGTTTAGAATCTGC+TGG | - | chr8_2:72805496-72805515 | Msa1267510:exon | 45.0% |
| TGACCAGCAGATTCTAAACG+TGG | + | chr8_2:72805502-72805521 | None:intergenic | 45.0% | |
| ! | AGTTGGTTCCAGAAGCTGAA+AGG | + | chr8_2:72805543-72805562 | None:intergenic | 45.0% |
| ! | GTGGCCATTAGCTTCAACAA+TGG | + | chr8_2:72805610-72805629 | None:intergenic | 45.0% |
| ! | ACACCAACAGCAACCTTTTC+TGG | + | chr8_2:72805712-72805731 | None:intergenic | 45.0% |
| ! | GTGTTTCTGAGTATTCACGG+TGG | + | chr8_2:72806070-72806089 | None:intergenic | 45.0% |
| TACTCGTCCATCCACACAAA+TGG | + | chr8_2:72806461-72806480 | None:intergenic | 45.0% | |
| ATAACCTGACCCTAGAGACA+TGG | - | chr8_2:72806524-72806543 | Msa1267510:intron | 45.0% | |
| !! | AAAACCATGTCTCTAGGGTC+AGG | + | chr8_2:72806531-72806550 | None:intergenic | 45.0% |
| TTACCAGTGAGGGAAGAAGA+TGG | - | chr8_2:72806552-72806571 | Msa1267510:intron | 45.0% | |
| TGGTTGTGATCCAGTGTAGA+CGG | - | chr8_2:72806572-72806591 | Msa1267510:intron | 45.0% | |
| TTGTTGTACACCGTCTACAC+TGG | + | chr8_2:72806585-72806604 | None:intergenic | 45.0% | |
| !! | AGCATTTTTGTCGGTGGGTT+AGG | - | chr8_2:72806839-72806858 | Msa1267510:intron | 45.0% |
| TGATGCCTAAAGGTGAACTG+TGG | + | chr8_2:72807058-72807077 | None:intergenic | 45.0% | |
| !! | GTATATTGAGAGTACCCCGA+CGG | - | chr8_2:72808031-72808050 | Msa1267510:intron | 45.0% |
| CCAAGACTTTATTGAGGCCA+GGG | - | chr8_2:72808319-72808338 | Msa1267510:CDS | 45.0% | |
| CACTGGATGATCCAAAATGC+TGG | - | chr8_2:72808459-72808478 | Msa1267510:CDS | 45.0% | |
| GATCAAAGGGGCAGATCATA+TGG | - | chr8_2:72808500-72808519 | Msa1267510:CDS | 45.0% | |
| !!! | AAATTATTCTTTAAAAAAAT+CGG | + | chr8_2:72806730-72806749 | None:intergenic | 5.0% |
| !!! | TAAATTTTGTTATAAAAAAA+TGG | + | chr8_2:72807440-72807459 | None:intergenic | 5.0% |
| CTTGTACATGGTGCTTGCCA+TGG | - | chr8_2:72805451-72805470 | Msa1267510:three_prime_UTR | 50.0% | |
| TGTACCAACTCCAAGCACCA+TGG | + | chr8_2:72805471-72805490 | None:intergenic | 50.0% | |
| !! | TGGTGCTTGGAGTTGGTACA+AGG | - | chr8_2:72805471-72805490 | Msa1267510:three_prime_UTR | 50.0% |
| ! | CTTGTGGGTCATAGTCTTGG+AGG | - | chr8_2:72805655-72805674 | Msa1267510:CDS | 50.0% |
| !! | TGTAGGTGGATTCTAGGGTG+AGG | - | chr8_2:72805916-72805935 | Msa1267510:intron | 50.0% |
| !! | GTAGGTGGATTCTAGGGTGA+GGG | - | chr8_2:72805917-72805936 | Msa1267510:intron | 50.0% |
| GGCTCTATTAAGTCCCTCAC+CGG | - | chr8_2:72805938-72805957 | Msa1267510:CDS | 50.0% | |
| TCTATTAAGTCCCTCACCGG+TGG | - | chr8_2:72805941-72805960 | Msa1267510:CDS | 50.0% | |
| !! | GGTTAAGTTGAGTGGTCCAC+CGG | + | chr8_2:72805960-72805979 | None:intergenic | 50.0% |
| CAACCATCTTCTTCCCTCAC+TGG | + | chr8_2:72806558-72806577 | None:intergenic | 50.0% | |
| GCCTCTTAATAGTGCTCCAC+CGG | - | chr8_2:72806631-72806650 | Msa1267510:intron | 50.0% | |
| ! | ACCGGTGGAGCACTATTAAG+AGG | + | chr8_2:72806635-72806654 | None:intergenic | 50.0% |
| TTAATAGTGCTCCACCGGTG+AGG | - | chr8_2:72806636-72806655 | Msa1267510:intron | 50.0% | |
| TAATAGTGCTCCACCGGTGA+GGG | - | chr8_2:72806637-72806656 | Msa1267510:intron | 50.0% | |
| GGTCCAATTAAGTCCCTCAC+CGG | + | chr8_2:72806653-72806672 | None:intergenic | 50.0% | |
| ! | ATTGGTGGAGTCTAGGGTGA+GGG | + | chr8_2:72806674-72806693 | None:intergenic | 50.0% |
| ! | AATTGGTGGAGTCTAGGGTG+AGG | + | chr8_2:72806675-72806694 | None:intergenic | 50.0% |
| GGAGAAACACATCTCCTGCA+AGG | - | chr8_2:72807688-72807707 | Msa1267510:intron | 50.0% | |
| GACACTGAATTCTGCCAGTG+TGG | - | chr8_2:72808065-72808084 | Msa1267510:intron | 50.0% | |
| CTATCAACACTCCTCCACTG+AGG | - | chr8_2:72808136-72808155 | Msa1267510:intron | 50.0% | |
| ACGTGTAGTTACCTCAGTGG+AGG | + | chr8_2:72808150-72808169 | None:intergenic | 50.0% | |
| GCCAAGACTTTATTGAGGCC+AGG | - | chr8_2:72808318-72808337 | Msa1267510:CDS | 50.0% | |
| CCCTGGCCTCAATAAAGTCT+TGG | + | chr8_2:72808322-72808341 | None:intergenic | 50.0% | |
| TCTTCCATAAAGAGGGACCC+TGG | + | chr8_2:72808339-72808358 | None:intergenic | 50.0% | |
| ATGGTGCTTGCCATGGTGCT+TGG | - | chr8_2:72805458-72805477 | Msa1267510:three_prime_UTR | 55.0% | |
| CTTGCCATGGTGCTTGGAGT+TGG | - | chr8_2:72805464-72805483 | Msa1267510:three_prime_UTR | 55.0% | |
| CCAATTAAGTCCCTCACCGG+TGG | + | chr8_2:72806650-72806669 | None:intergenic | 55.0% | |
| CCACCGGTGAGGGACTTAAT+TGG | - | chr8_2:72806647-72806666 | Msa1267510:intron | 55.0% | |
| TGTCCAACCATTCAGCCGTC+GGG | + | chr8_2:72808049-72808068 | None:intergenic | 55.0% | |
| GTGTCCAACCATTCAGCCGT+CGG | + | chr8_2:72808050-72808069 | None:intergenic | 55.0% | |
| GTTGAGTGGTCCACCGGTGA+GGG | + | chr8_2:72805954-72805973 | None:intergenic | 60.0% | |
| AGTTGAGTGGTCCACCGGTG+AGG | + | chr8_2:72805955-72805974 | None:intergenic | 60.0% | |
| ! | AGAGTACCCCGACGGCTGAA+TGG | - | chr8_2:72808039-72808058 | Msa1267510:intron | 60.0% |
| TACCCCGACGGCTGAATGGT+TGG | - | chr8_2:72808043-72808062 | Msa1267510:intron | 60.0% | |
| GTCCAACCATTCAGCCGTCG+GGG | + | chr8_2:72808048-72808067 | None:intergenic | 60.0% | |
| GAGGCCAGGGTCCCTCTTTA+TGG | - | chr8_2:72808332-72808351 | Msa1267510:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 72805368 | 72808722 | 72805368 | ID=Msa1267510;Name=Msa1267510 |
| chr8_2 | mRNA | 72805368 | 72808722 | 72805368 | ID=Msa1267510-mRNA-1;Parent=Msa1267510;Name=Msa1267510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=44|1|1|1|1|1|3|135|261 |
| chr8_2 | exon | 72805368 | 72805784 | 72805368 | ID=Msa1267510-mRNA-1:exon:24711;Parent=Msa1267510-mRNA-1 |
| chr8_2 | exon | 72805933 | 72806058 | 72805933 | ID=Msa1267510-mRNA-1:exon:24710;Parent=Msa1267510-mRNA-1 |
| chr8_2 | exon | 72808301 | 72808722 | 72808301 | ID=Msa1267510-mRNA-1:exon:24709;Parent=Msa1267510-mRNA-1 |
| chr8_2 | five_prime_UTR | 72808679 | 72808722 | 72808679 | ID=Msa1267510-mRNA-1:five_prime_utr;Parent=Msa1267510-mRNA-1 |
| chr8_2 | CDS | 72808301 | 72808678 | 72808301 | ID=Msa1267510-mRNA-1:cds;Parent=Msa1267510-mRNA-1 |
| chr8_2 | CDS | 72805933 | 72806058 | 72805933 | ID=Msa1267510-mRNA-1:cds;Parent=Msa1267510-mRNA-1 |
| chr8_2 | CDS | 72805503 | 72805784 | 72805503 | ID=Msa1267510-mRNA-1:cds;Parent=Msa1267510-mRNA-1 |
| chr8_2 | three_prime_UTR | 72805368 | 72805502 | 72805368 | ID=Msa1267510-mRNA-1:three_prime_utr;Parent=Msa1267510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
