Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305330 | RHN42187.1 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305330 | sp|Q6RYA0|SABP2_TOBAC | 59.608 | 255 | 99 | 1 | 10 | 260 | 5 | 259 | 4.93e-114 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305330 | A0A396GUA0 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090510 | Msa1305330 | 0.815892 | 7.322938e-52 | -8.615850e-47 |
| Msa0107400 | Msa1305330 | 0.805003 | 1.646139e-49 | -8.615850e-47 |
| Msa0641130 | Msa1305330 | 0.806003 | 1.015867e-49 | -8.615850e-47 |
| Msa0153980 | Msa1305330 | 0.800511 | 1.392503e-48 | -8.615850e-47 |
| Msa0164910 | Msa1305330 | 0.810563 | 1.083268e-50 | -8.615850e-47 |
| Msa0213540 | Msa1305330 | 0.843812 | 1.113055e-58 | -8.615850e-47 |
| Msa0233370 | Msa1305330 | 0.801655 | 8.127565e-49 | -8.615850e-47 |
| Msa1267480 | Msa1305330 | 0.966255 | 1.120587e-125 | -8.615850e-47 |
| Msa1267510 | Msa1305330 | 0.965411 | 1.433393e-124 | -8.615850e-47 |
| Msa1305180 | Msa1305330 | 0.997863 | 8.362754e-251 | -8.615850e-47 |
| Msa1305330 | Msa1440190 | 0.804611 | 1.987562e-49 | -8.615850e-47 |
| Msa1305330 | Msa1449750 | 0.805531 | 1.276076e-49 | -8.615850e-47 |
| Msa1013070 | Msa1305330 | 0.817077 | 3.975920e-52 | -8.615850e-47 |
| Msa1062040 | Msa1305330 | 0.818485 | 1.913063e-52 | -8.615850e-47 |
| Msa1094280 | Msa1305330 | 0.822666 | 2.096343e-53 | -8.615850e-47 |
| Msa0331020 | Msa1305330 | 0.834866 | 2.338729e-56 | -8.615850e-47 |
| Msa1107200 | Msa1305330 | 0.800396 | 1.469799e-48 | -8.615850e-47 |
| Msa1131230 | Msa1305330 | 0.985940 | 3.714652e-165 | -8.615850e-47 |
| Msa1203480 | Msa1305330 | 0.965376 | 1.593051e-124 | -8.615850e-47 |
| Msa0545050 | Msa1305330 | 0.813884 | 2.041387e-51 | -8.615850e-47 |
| Msa0600590 | Msa1305330 | 0.803127 | 4.043399e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305330 | MtrunA17_Chr8g0374141 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Msa1305330 | MtrunA17_Chr5g0402901 | 62.302 | 252 | 95 | 0 | 9 | 260 | 10 | 261 | 1.77e-116 | 334 |
| Msa1305330 | MtrunA17_Chr5g0402881 | 57.854 | 261 | 109 | 1 | 1 | 260 | 18 | 278 | 5.75e-109 | 316 |
| Msa1305330 | MtrunA17_Chr5g0402851 | 42.912 | 261 | 144 | 2 | 5 | 260 | 2 | 262 | 9.25e-74 | 226 |
| Msa1305330 | MtrunA17_Chr5g0402871 | 45.525 | 257 | 131 | 4 | 11 | 260 | 5 | 259 | 6.30e-73 | 223 |
| Msa1305330 | MtrunA17_Chr8g0336391 | 43.191 | 257 | 137 | 5 | 11 | 260 | 27 | 281 | 7.73e-69 | 214 |
| Msa1305330 | MtrunA17_Chr3g0104871 | 41.634 | 257 | 140 | 4 | 10 | 260 | 18 | 270 | 2.26e-66 | 207 |
| Msa1305330 | MtrunA17_Chr5g0402841 | 40.856 | 257 | 146 | 3 | 9 | 260 | 6 | 261 | 1.84e-65 | 204 |
| Msa1305330 | MtrunA17_Chr8g0336441 | 42.023 | 257 | 139 | 5 | 10 | 260 | 26 | 278 | 3.92e-63 | 199 |
| Msa1305330 | MtrunA17_Chr8g0336411 | 41.699 | 259 | 139 | 5 | 10 | 260 | 27 | 281 | 5.06e-62 | 196 |
| Msa1305330 | MtrunA17_Chr8g0336381 | 40.385 | 260 | 145 | 5 | 9 | 260 | 5 | 262 | 1.88e-60 | 192 |
| Msa1305330 | MtrunA17_Chr8g0336401 | 38.996 | 259 | 150 | 5 | 10 | 260 | 26 | 284 | 5.60e-59 | 189 |
| Msa1305330 | MtrunA17_Chr7g0219561 | 33.730 | 252 | 158 | 3 | 11 | 257 | 124 | 371 | 1.66e-37 | 135 |
| Msa1305330 | MtrunA17_Chr3g0077351 | 33.077 | 260 | 158 | 5 | 7 | 257 | 90 | 342 | 1.10e-36 | 132 |
| Msa1305330 | MtrunA17_Chr3g0128581 | 32.927 | 246 | 153 | 5 | 7 | 246 | 32 | 271 | 3.27e-34 | 125 |
| Msa1305330 | MtrunA17_Chr5g0428471 | 31.395 | 258 | 166 | 4 | 9 | 260 | 28 | 280 | 3.53e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305330 | AT2G23620.1 | 54.086 | 257 | 114 | 2 | 9 | 261 | 7 | 263 | 2.59e-102 | 298 |
| Msa1305330 | AT2G23600.1 | 52.964 | 253 | 115 | 2 | 9 | 257 | 7 | 259 | 2.60e-94 | 278 |
| Msa1305330 | AT2G23610.1 | 52.734 | 256 | 117 | 3 | 9 | 260 | 7 | 262 | 3.30e-94 | 278 |
| Msa1305330 | AT2G23600.2 | 52.964 | 253 | 115 | 2 | 9 | 257 | 22 | 274 | 3.66e-94 | 278 |
| Msa1305330 | AT2G23590.1 | 47.638 | 254 | 128 | 1 | 7 | 260 | 23 | 271 | 8.07e-89 | 265 |
| Msa1305330 | AT4G37150.1 | 49.020 | 255 | 125 | 2 | 10 | 260 | 2 | 255 | 4.67e-88 | 262 |
| Msa1305330 | AT2G23580.1 | 49.805 | 257 | 124 | 2 | 9 | 260 | 6 | 262 | 6.41e-88 | 262 |
| Msa1305330 | AT5G10300.1 | 49.027 | 257 | 125 | 2 | 9 | 261 | 4 | 258 | 5.80e-87 | 259 |
| Msa1305330 | AT2G23550.1 | 48.638 | 257 | 127 | 2 | 9 | 260 | 6 | 262 | 9.50e-84 | 251 |
| Msa1305330 | AT2G23550.4 | 48.638 | 257 | 127 | 2 | 9 | 260 | 13 | 269 | 1.24e-83 | 251 |
| Msa1305330 | AT2G23560.1 | 46.063 | 254 | 135 | 2 | 9 | 260 | 6 | 259 | 4.83e-80 | 242 |
| Msa1305330 | AT2G23610.2 | 46.640 | 253 | 92 | 2 | 9 | 260 | 7 | 217 | 9.01e-78 | 234 |
| Msa1305330 | AT3G50440.1 | 43.478 | 253 | 139 | 2 | 12 | 260 | 22 | 274 | 7.98e-73 | 224 |
| Msa1305330 | AT2G23550.2 | 45.312 | 256 | 108 | 2 | 9 | 260 | 6 | 233 | 6.79e-70 | 215 |
| Msa1305330 | AT2G23600.3 | 52.439 | 164 | 74 | 2 | 9 | 168 | 22 | 185 | 5.33e-59 | 186 |
| Msa1305330 | AT2G23580.2 | 48.045 | 179 | 85 | 3 | 9 | 182 | 6 | 181 | 5.54e-53 | 171 |
| Msa1305330 | AT2G23570.1 | 48.315 | 178 | 88 | 1 | 87 | 260 | 1 | 178 | 6.65e-53 | 170 |
| Msa1305330 | AT2G23550.3 | 47.273 | 165 | 82 | 2 | 9 | 168 | 13 | 177 | 2.32e-50 | 164 |
| Msa1305330 | AT5G10300.2 | 47.590 | 166 | 81 | 2 | 9 | 170 | 4 | 167 | 1.38e-47 | 157 |
| Msa1305330 | AT4G37140.1 | 54.701 | 117 | 53 | 0 | 10 | 126 | 2 | 118 | 2.26e-45 | 149 |
| Msa1305330 | AT4G09900.1 | 33.074 | 257 | 156 | 5 | 10 | 257 | 97 | 346 | 1.36e-39 | 140 |
| Msa1305330 | AT1G26360.1 | 32.669 | 251 | 164 | 2 | 10 | 257 | 188 | 436 | 3.17e-39 | 142 |
| Msa1305330 | AT1G33990.1 | 32.443 | 262 | 164 | 5 | 3 | 257 | 90 | 345 | 4.51e-39 | 139 |
| Msa1305330 | AT3G29770.1 | 35.294 | 255 | 150 | 5 | 11 | 257 | 138 | 385 | 1.01e-37 | 137 |
| Msa1305330 | AT5G58310.1 | 32.700 | 263 | 160 | 5 | 7 | 257 | 1 | 258 | 2.20e-37 | 132 |
| Msa1305330 | AT4G37140.2 | 59.341 | 91 | 37 | 0 | 10 | 100 | 2 | 92 | 3.50e-37 | 127 |
| Msa1305330 | AT1G69240.1 | 31.518 | 257 | 161 | 6 | 10 | 257 | 186 | 436 | 1.11e-36 | 135 |
| Msa1305330 | AT4G16690.1 | 31.707 | 246 | 153 | 4 | 11 | 249 | 12 | 249 | 2.42e-33 | 122 |
| Msa1305330 | AT3G10870.1 | 30.738 | 244 | 157 | 5 | 11 | 246 | 20 | 259 | 8.79e-31 | 115 |
| Msa1305330 | AT3G29770.2 | 40.278 | 72 | 43 | 0 | 11 | 82 | 138 | 209 | 1.94e-12 | 66.2 |
Find 71 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCATTAATCCCAGCATTT+TGG | 0.157812 | 8_3:+68760203 | None:intergenic |
| GAGCTTATTGGACAAGAATT+TGG | 0.162838 | 8_3:+68760559 | None:intergenic |
| GAGGCCAGGGTCCCTCTTTA+TGG | 0.202954 | 8_3:-68760341 | Msa1305330:CDS |
| GTTCTTGACCTTTCAGCTTC+TGG | 0.234804 | 8_3:-68763147 | Msa1305330:CDS |
| AACAAAACATCAATGTTCTT+TGG | 0.296879 | 8_3:-68760584 | Msa1305330:CDS |
| GCAAGATAACTTCTCTAAAC+AGG | 0.300900 | 8_3:-68760305 | Msa1305330:CDS |
| ACATGCTGATTCCTTTATTT+CGG | 0.312733 | 8_3:+68760037 | None:intergenic |
| TGAAGTTTAGCTTAATTTGT+TGG | 0.339405 | 8_3:-68760080 | Msa1305330:three_prime_UTR |
| AGCTTATTGGACAAGAATTT+GGG | 0.339872 | 8_3:+68760560 | None:intergenic |
| AACTTCTCTAAACAGGGTTA+TGG | 0.360676 | 8_3:-68760298 | Msa1305330:CDS |
| ATTCTTGTGGGTCACAGTCT+TGG | 0.390920 | 8_3:-68763027 | Msa1305330:CDS |
| GGAGTGTTGATAGAGCTTAT+TGG | 0.392660 | 8_3:+68760547 | None:intergenic |
| ACTTCTCTAAACAGGGTTAT+GGG | 0.399672 | 8_3:-68760297 | Msa1305330:CDS |
| AATGGAACAATTTCCAGAAA+AGG | 0.417631 | 8_3:-68762983 | Msa1305330:CDS |
| ATCCAGTGTTGAAATTTCAA+TGG | 0.421026 | 8_3:+68760229 | None:intergenic |
| GATTTAGCAGGATCTTGAAT+TGG | 0.423617 | 8_3:-68760377 | Msa1305330:intron |
| TGAACCATTGTTGAAGCTAA+TGG | 0.426644 | 8_3:-68763076 | Msa1305330:CDS |
| ATCTTCAAGTTTCTTCAAGT+TGG | 0.431463 | 8_3:+68763122 | None:intergenic |
| CTTGTGGGTCACAGTCTTGG+AGG | 0.449534 | 8_3:-68763024 | Msa1305330:CDS |
| GTGCACAAAATTTAATTGCT+AGG | 0.449601 | 8_3:-68763263 | Msa1305330:CDS |
| TGCTTCTTATGTCATGGAAA+AGG | 0.451368 | 8_3:-68762911 | Msa1305330:intron |
| CACTGGATGATCCAAAATGC+TGG | 0.456893 | 8_3:-68760214 | Msa1305330:CDS |
| GATCAAAGGGGCAGATCATA+TGG | 0.460208 | 8_3:-68760173 | Msa1305330:CDS |
| TGTCCAACCATTCAGCCGTC+GGG | 0.460887 | 8_3:+68760627 | None:intergenic |
| ATGATGTATATGAGATCAAA+GGG | 0.461047 | 8_3:-68760186 | Msa1305330:CDS |
| ATGGTGCTTGCCATGGTGCT+TGG | 0.470545 | 8_3:-68763221 | Msa1305330:CDS |
| TTCCATTGAAATTTCAACAC+TGG | 0.470781 | 8_3:-68760231 | Msa1305330:CDS |
| GCCAAGACTTTATTGAGGCC+AGG | 0.472046 | 8_3:-68760355 | Msa1305330:CDS |
| CACAATTCCACCAAATGAAA+AGG | 0.475812 | 8_3:-68763052 | Msa1305330:CDS |
| CTTGCCATGGTGCTTGGAGT+TGG | 0.476673 | 8_3:-68763215 | Msa1305330:CDS |
| GAAGCATTGTGTTGAATGTC+CGG | 0.482394 | 8_3:+68762928 | None:intergenic |
| CCCTGGCCTCAATAAAGTCT+TGG | 0.486588 | 8_3:+68760354 | None:intergenic |
| ACACAATGCTTCTTATGTCA+TGG | 0.491092 | 8_3:-68762917 | Msa1305330:CDS |
| AATGAAAAGGTGATTCTTGT+GGG | 0.497441 | 8_3:-68763039 | Msa1305330:CDS |
| CTTGTACATGGTGCTTGCCA+TGG | 0.498303 | 8_3:-68763228 | Msa1305330:CDS |
| CATAATGATTATTGTTGTTG+TGG | 0.503508 | 8_3:+68763287 | None:intergenic |
| TACCCCGACGGCTGAATGGT+TGG | 0.505808 | 8_3:-68760630 | Msa1305330:CDS |
| AGAGTACCCCGACGGCTGAA+TGG | 0.512702 | 8_3:-68760634 | Msa1305330:CDS |
| ATTGTTTGCAATGAAGACCT+TGG | 0.520269 | 8_3:-68760256 | Msa1305330:CDS |
| AGAGAATTACATAGTTCTTG+TGG | 0.522605 | 8_3:+68760136 | None:intergenic |
| CCAAGACTTTATTGAGGCCA+GGG | 0.522924 | 8_3:-68760354 | Msa1305330:CDS |
| GAAATTTCAATGGAATTCCA+AGG | 0.525367 | 8_3:+68760239 | None:intergenic |
| GTGTCCAACCATTCAGCCGT+CGG | 0.529692 | 8_3:+68760626 | None:intergenic |
| AAGCATTATGTTCTTGTACA+TGG | 0.531450 | 8_3:-68763240 | Msa1305330:CDS |
| AATGATGTATATGAGATCAA+AGG | 0.543714 | 8_3:-68760187 | Msa1305330:CDS |
| GAGAAACTTTATTGTAGAGG+TGG | 0.543747 | 8_3:-68760004 | Msa1305330:three_prime_UTR |
| AAATGAAAAGGTGATTCTTG+TGG | 0.544198 | 8_3:-68763040 | Msa1305330:CDS |
| TTTCCAGAAAAGGTTGCCGT+TGG | 0.552011 | 8_3:-68762973 | Msa1305330:CDS |
| AATTGGCCAAGACTTTATTG+AGG | 0.557607 | 8_3:-68760360 | Msa1305330:CDS |
| TGTGAGAAACTTTATTGTAG+AGG | 0.558702 | 8_3:-68760007 | Msa1305330:three_prime_UTR |
| TGGTGCTTGGAGTTGGTACA+AGG | 0.561033 | 8_3:-68763208 | Msa1305330:CDS |
| GTGGCCATTAGCTTCAACAA+TGG | 0.573860 | 8_3:+68763072 | None:intergenic |
| GAGTCAAGTCTTCCATAAAG+AGG | 0.579389 | 8_3:+68760329 | None:intergenic |
| AGTTGGTTCCAGAAGCTGAA+AGG | 0.584796 | 8_3:+68763139 | None:intergenic |
| AAGCCACGTTTAGAATCTGC+TGG | 0.586149 | 8_3:-68763183 | Msa1305330:CDS |
| ACTGGATGATCCAAAATGCT+GGG | 0.589459 | 8_3:-68760213 | Msa1305330:CDS |
| CAAGATAACTTCTCTAAACA+GGG | 0.605122 | 8_3:-68760304 | Msa1305330:CDS |
| ACTTAGCATAGCTCTTGCAA+TGG | 0.605259 | 8_3:-68763001 | Msa1305330:CDS |
| AGTCAAGTCTTCCATAAAGA+GGG | 0.612508 | 8_3:+68760330 | None:intergenic |
| TTTAGAATCTGCTGGTCATG+TGG | 0.623515 | 8_3:-68763175 | Msa1305330:CDS |
| GACACTGAATTCTGCCAGTG+TGG | 0.627184 | 8_3:-68760608 | Msa1305330:CDS |
| TCTTCCATAAAGAGGGACCC+TGG | 0.632528 | 8_3:+68760337 | None:intergenic |
| GTCCAACCATTCAGCCGTCG+GGG | 0.648788 | 8_3:+68760628 | None:intergenic |
| ACGTGTAGTTACCTCAGTGG+AGG | 0.650895 | 8_3:+68760526 | None:intergenic |
| AGCTGTTAAGAAAACACCAA+CGG | 0.651976 | 8_3:+68762957 | None:intergenic |
| TTAACGTGTAGTTACCTCAG+TGG | 0.666283 | 8_3:+68760523 | None:intergenic |
| TTGCAAACAATAAAAGCACG+TGG | 0.692906 | 8_3:+68760268 | None:intergenic |
| TGTACCAACTCCAAGCACCA+TGG | 0.696634 | 8_3:+68763211 | None:intergenic |
| TGACCAGCAGATTCTAAACG+TGG | 0.719220 | 8_3:+68763180 | None:intergenic |
| TGATGTATATGAGATCAAAG+GGG | 0.769291 | 8_3:-68760185 | Msa1305330:CDS |
| CTATCAACACTCCTCCACTG+AGG | 0.776664 | 8_3:-68760537 | Msa1305330:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAAAACATAAAAAG+GGG | + | chr8_3:68761534-68761553 | None:intergenic | 10.0% |
| !! | CATATAATAAAACATAAAAA+GGG | + | chr8_3:68761535-68761554 | None:intergenic | 10.0% |
| !! | ACATATAATAAAACATAAAA+AGG | + | chr8_3:68761536-68761555 | None:intergenic | 10.0% |
| !!! | AAATACATTTTATTCATTTA+TGG | + | chr8_3:68761897-68761916 | None:intergenic | 10.0% |
| !!! | CATAATAAGTAATTTTTATT+TGG | + | chr8_3:68761981-68762000 | None:intergenic | 10.0% |
| !! | TTTATAACAAAATTTAGATT+AGG | - | chr8_3:68762050-68762069 | Msa1305330:intron | 10.0% |
| !! | TTATAACAAAATTTAGATTA+GGG | - | chr8_3:68762051-68762070 | Msa1305330:intron | 10.0% |
| !! | ACAAAAAATAAGATTAATAA+TGG | + | chr8_3:68762607-68762626 | None:intergenic | 10.0% |
| !!! | TAGTTTTTATGAAATTTTGT+AGG | - | chr8_3:68760502-68760521 | Msa1305330:intron | 15.0% |
| !!! | ATAAGTCTTATTTAATCTAA+CGG | + | chr8_3:68760584-68760603 | None:intergenic | 15.0% |
| !! | GAAAATAAATTAAAAAGTTG+TGG | + | chr8_3:68760718-68760737 | None:intergenic | 15.0% |
| !!! | GAATTTGTAAAATTTTGTTA+TGG | - | chr8_3:68761022-68761041 | Msa1305330:intron | 15.0% |
| !! | ATACATTTAGTATACAAAAT+TGG | + | chr8_3:68761297-68761316 | None:intergenic | 15.0% |
| !! | TATAATAAAACATAAAAAGG+GGG | + | chr8_3:68761533-68761552 | None:intergenic | 15.0% |
| !! | CCTATATTTATAAAAACAAA+TGG | + | chr8_3:68762238-68762257 | None:intergenic | 15.0% |
| !!! | CCATTTGTTTTTATAAATAT+AGG | - | chr8_3:68762235-68762254 | Msa1305330:intron | 15.0% |
| !! | TCACAAATATGATTTCTATA+TGG | - | chr8_3:68760458-68760477 | Msa1305330:intron | 20.0% |
| !!! | TTTTTATGAAATTTTGTAGG+TGG | - | chr8_3:68760505-68760524 | Msa1305330:intron | 20.0% |
| !!! | TTTTCCATTTTTTTTGTCAA+TGG | + | chr8_3:68760863-68760882 | None:intergenic | 20.0% |
| !! | AGGTTCAGAAAATAATATAA+GGG | + | chr8_3:68760911-68760930 | None:intergenic | 20.0% |
| !! | AAGGTTCAGAAAATAATATA+AGG | + | chr8_3:68760912-68760931 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTTTCTTCTTCAA+AGG | + | chr8_3:68760931-68760950 | None:intergenic | 20.0% |
| !!! | TAACTATTTAGCATTTTTGT+CGG | - | chr8_3:68761435-68761454 | Msa1305330:intron | 20.0% |
| !! | ATAATAAAACATAAAAAGGG+GGG | + | chr8_3:68761532-68761551 | None:intergenic | 20.0% |
| !! | ATTTGTCCTTTACAATAAAA+TGG | - | chr8_3:68761574-68761593 | Msa1305330:intron | 20.0% |
| !!! | AGTTAAATTCTTGATACTTT+TGG | + | chr8_3:68761726-68761745 | None:intergenic | 20.0% |
| !! | TCATACAAGAAAAATAGATT+AGG | - | chr8_3:68762275-68762294 | Msa1305330:intron | 20.0% |
| !! | TGACAATTAAAAAGTAATGA+AGG | + | chr8_3:68762457-68762476 | None:intergenic | 20.0% |
| !! | TTGAAGTTTCCATTAAAAAA+TGG | - | chr8_3:68762845-68762864 | Msa1305330:intron | 20.0% |
| !!! | AATTGTACTCCATTTTTTAA+TGG | + | chr8_3:68762857-68762876 | None:intergenic | 20.0% |
| !! | CATAATGATTATTGTTGTTG+TGG | + | chr8_3:68759999-68760018 | None:intergenic | 25.0% |
| ! | TCAATGGTGATATTTATTGT+GGG | + | chr8_3:68760847-68760866 | None:intergenic | 25.0% |
| ! | ATCACCATTGACAAAAAAAA+TGG | - | chr8_3:68760856-68760875 | Msa1305330:intron | 25.0% |
| !!! | AAAATTTTGTTATGGAACGA+AGG | - | chr8_3:68761030-68761049 | Msa1305330:intron | 25.0% |
| !! | TCAATTTTTAACACAGACAA+TGG | - | chr8_3:68761098-68761117 | Msa1305330:intron | 25.0% |
| ! | CATTTAGTATACAAAATTGG+TGG | + | chr8_3:68761294-68761313 | None:intergenic | 25.0% |
| !! | TTCCTCTTAATTTGAATTTG+TGG | - | chr8_3:68762019-68762038 | Msa1305330:intron | 25.0% |
| ! | ATATAAAACGACAAGTAAGT+AGG | + | chr8_3:68762393-68762412 | None:intergenic | 25.0% |
| !! | TCTAAGACAATTAAGTAAAC+TGG | + | chr8_3:68762496-68762515 | None:intergenic | 25.0% |
| !!! | AATTTTAAAACGACAAGCAA+GGG | + | chr8_3:68762530-68762549 | None:intergenic | 25.0% |
| ! | CATTAATTACTGAAGAGATA+TGG | - | chr8_3:68762558-68762577 | Msa1305330:intron | 25.0% |
| ! | AACAAAACATCAATGTTCTT+TGG | - | chr8_3:68762699-68762718 | Msa1305330:intron | 25.0% |
| ! | ACTAATAAAGACAAACTACT+TGG | - | chr8_3:68762884-68762903 | Msa1305330:intron | 25.0% |
| ! | AATGATGTATATGAGATCAA+AGG | - | chr8_3:68763096-68763115 | Msa1305330:CDS | 25.0% |
| ! | ATGATGTATATGAGATCAAA+GGG | - | chr8_3:68763097-68763116 | Msa1305330:CDS | 25.0% |
| !!! | TGAAGTTTAGCTTAATTTGT+TGG | - | chr8_3:68763203-68763222 | Msa1305330:CDS | 25.0% |
| !!! | TTACTTTTTGTCCGAAATAA+AGG | - | chr8_3:68763235-68763254 | Msa1305330:CDS | 25.0% |
| GTGCACAAAATTTAATTGCT+AGG | - | chr8_3:68760020-68760039 | Msa1305330:three_prime_UTR | 30.0% | |
| AAGCATTATGTTCTTGTACA+TGG | - | chr8_3:68760043-68760062 | Msa1305330:three_prime_UTR | 30.0% | |
| ! | ATCTTCAAGTTTCTTCAAGT+TGG | + | chr8_3:68760164-68760183 | None:intergenic | 30.0% |
| ! | ACAAGAATCACCTTTTCATT+TGG | + | chr8_3:68760244-68760263 | None:intergenic | 30.0% |
| AAATGAAAAGGTGATTCTTG+TGG | - | chr8_3:68760243-68760262 | Msa1305330:CDS | 30.0% | |
| AATGAAAAGGTGATTCTTGT+GGG | - | chr8_3:68760244-68760263 | Msa1305330:CDS | 30.0% | |
| AATGGAACAATTTCCAGAAA+AGG | - | chr8_3:68760300-68760319 | Msa1305330:CDS | 30.0% | |
| ! | TTTCTTAACAGCTTTTATGC+CGG | - | chr8_3:68760336-68760355 | Msa1305330:CDS | 30.0% |
| !! | AAATTTTGTAGGTGGATTCT+AGG | - | chr8_3:68760513-68760532 | Msa1305330:intron | 30.0% |
| !! | AATTTTGTAGGTGGATTCTA+GGG | - | chr8_3:68760514-68760533 | Msa1305330:intron | 30.0% |
| GAAAGAACATTAATTCAGTG+TGG | + | chr8_3:68760627-68760646 | None:intergenic | 30.0% | |
| TCGAGTACTTACATTAGAAA+AGG | + | chr8_3:68760747-68760766 | None:intergenic | 30.0% | |
| TTCTAATGTAAGTACTCGAT+AGG | - | chr8_3:68760748-68760767 | Msa1305330:intron | 30.0% | |
| TGACATGAGAAAGACATTAA+TGG | + | chr8_3:68760815-68760834 | None:intergenic | 30.0% | |
| GTCAATGGTGATATTTATTG+TGG | + | chr8_3:68760848-68760867 | None:intergenic | 30.0% | |
| TGAATTTCCATTTGTGTAGA+TGG | - | chr8_3:68761055-68761074 | Msa1305330:intron | 30.0% | |
| GTAAAAAAACCATGTCTCTA+GGG | + | chr8_3:68761141-68761160 | None:intergenic | 30.0% | |
| AGTAAAAAAACCATGTCTCT+AGG | + | chr8_3:68761142-68761161 | None:intergenic | 30.0% | |
| !!! | ACATGGTTTTTTTACTAGTG+AGG | - | chr8_3:68761146-68761165 | Msa1305330:intron | 30.0% |
| !!! | CATGGTTTTTTTACTAGTGA+GGG | - | chr8_3:68761147-68761166 | Msa1305330:intron | 30.0% |
| ! | AAATATTTACAGAGTGTCTC+AGG | - | chr8_3:68761364-68761383 | Msa1305330:intron | 30.0% |
| CAGGACACTTAAAAAGATAT+CGG | - | chr8_3:68761383-68761402 | Msa1305330:intron | 30.0% | |
| AGGACACTTAAAAAGATATC+GGG | - | chr8_3:68761384-68761403 | Msa1305330:intron | 30.0% | |
| ! | TATTTAGCATTTTTGTCGGT+GGG | - | chr8_3:68761439-68761458 | Msa1305330:intron | 30.0% |
| GAAGAACATGTAATAGACAA+GGG | + | chr8_3:68761489-68761508 | None:intergenic | 30.0% | |
| AGAAGAACATGTAATAGACA+AGG | + | chr8_3:68761490-68761509 | None:intergenic | 30.0% | |
| !! | GGGGGAAAAGTATATTTTAA+GGG | + | chr8_3:68761514-68761533 | None:intergenic | 30.0% |
| ! | TCGGTACCATTTTATTGTAA+AGG | + | chr8_3:68761583-68761602 | None:intergenic | 30.0% |
| AAAGCAAAACTTTCCAGTTT+CGG | + | chr8_3:68761602-68761621 | None:intergenic | 30.0% | |
| !! | TTGATACTTTTGGAAACGAT+AGG | + | chr8_3:68761716-68761735 | None:intergenic | 30.0% |
| ! | ATTCGTTCGAGTTTAAATTC+AGG | - | chr8_3:68761807-68761826 | Msa1305330:intron | 30.0% |
| GACCACAAATTCAAATTAAG+AGG | + | chr8_3:68762024-68762043 | None:intergenic | 30.0% | |
| GATTCTCTCAAACTTTACAT+GGG | + | chr8_3:68762087-68762106 | None:intergenic | 30.0% | |
| TGATTCTCTCAAACTTTACA+TGG | + | chr8_3:68762088-68762107 | None:intergenic | 30.0% | |
| TGCAGTTGACACAAATTAAA+AGG | + | chr8_3:68762206-68762225 | None:intergenic | 30.0% | |
| TGACTTGAATTCAAGTAAGT+AGG | + | chr8_3:68762349-68762368 | None:intergenic | 30.0% | |
| AATTGTCACATTTACACTTG+TGG | - | chr8_3:68762469-68762488 | Msa1305330:intron | 30.0% | |
| !!! | GAATTTTAAAACGACAAGCA+AGG | + | chr8_3:68762531-68762550 | None:intergenic | 30.0% |
| AGCTTATTGGACAAGAATTT+GGG | + | chr8_3:68762726-68762745 | None:intergenic | 30.0% | |
| TATAGTACTAGTATGAGACA+AGG | + | chr8_3:68762799-68762818 | None:intergenic | 30.0% | |
| CAAGATAACTTCTCTAAACA+GGG | - | chr8_3:68762979-68762998 | Msa1305330:CDS | 30.0% | |
| GAAATTTCAATGGAATTCCA+AGG | + | chr8_3:68763047-68763066 | None:intergenic | 30.0% | |
| TTCCATTGAAATTTCAACAC+TGG | - | chr8_3:68763052-68763071 | Msa1305330:CDS | 30.0% | |
| ! | ATCCAGTGTTGAAATTTCAA+TGG | + | chr8_3:68763057-68763076 | None:intergenic | 30.0% |
| TGATGTATATGAGATCAAAG+GGG | - | chr8_3:68763098-68763117 | Msa1305330:CDS | 30.0% | |
| AGAGAATTACATAGTTCTTG+TGG | + | chr8_3:68763150-68763169 | None:intergenic | 30.0% | |
| !! | ACATGCTGATTCCTTTATTT+CGG | + | chr8_3:68763249-68763268 | None:intergenic | 30.0% |
| TGTGAGAAACTTTATTGTAG+AGG | - | chr8_3:68763276-68763295 | Msa1305330:exon | 30.0% | |
| TGAACCATTGTTGAAGCTAA+TGG | - | chr8_3:68760207-68760226 | Msa1305330:CDS | 35.0% | |
| !! | CTTTTCATTTGGTGGAATTG+TGG | + | chr8_3:68760233-68760252 | None:intergenic | 35.0% |
| CACAATTCCACCAAATGAAA+AGG | - | chr8_3:68760231-68760250 | Msa1305330:CDS | 35.0% | |
| ! | AGAATCACCTTTTCATTTGG+TGG | + | chr8_3:68760241-68760260 | None:intergenic | 35.0% |
| AGCTGTTAAGAAAACACCAA+CGG | + | chr8_3:68760329-68760348 | None:intergenic | 35.0% | |
| ACACAATGCTTCTTATGTCA+TGG | - | chr8_3:68760366-68760385 | Msa1305330:CDS | 35.0% | |
| TGCTTCTTATGTCATGGAAA+AGG | - | chr8_3:68760372-68760391 | Msa1305330:intron | 35.0% | |
| !! | AATCTAACGGTTAAGTTGAG+TGG | + | chr8_3:68760571-68760590 | None:intergenic | 35.0% |
| AAGACTTATGCGATCTCATT+AGG | - | chr8_3:68760595-68760614 | Msa1305330:CDS | 35.0% | |
| ! | TCAGTGTTTCTGAGTATTCA+CGG | + | chr8_3:68760676-68760695 | None:intergenic | 35.0% |
| CATGAGAAAGACATTAATGG+AGG | + | chr8_3:68760812-68760831 | None:intergenic | 35.0% | |
| ATTTCACCATCGAAGCATAA+TGG | - | chr8_3:68760990-68761009 | Msa1305330:intron | 35.0% | |
| TTTCACCATCGAAGCATAAT+GGG | - | chr8_3:68760991-68761010 | Msa1305330:intron | 35.0% | |
| ! | ATTTTCCCATTATGCTTCGA+TGG | + | chr8_3:68760999-68761018 | None:intergenic | 35.0% |
| TTTAACACAGACAATGGTTG+TGG | - | chr8_3:68761104-68761123 | Msa1305330:intron | 35.0% | |
| TACAAAATTGGTGGAGTCTA+GGG | + | chr8_3:68761285-68761304 | None:intergenic | 35.0% | |
| ATACAAAATTGGTGGAGTCT+AGG | + | chr8_3:68761286-68761305 | None:intergenic | 35.0% | |
| GGACACTTAAAAAGATATCG+GGG | - | chr8_3:68761385-68761404 | Msa1305330:intron | 35.0% | |
| ! | CTATTTAGCATTTTTGTCGG+TGG | - | chr8_3:68761438-68761457 | Msa1305330:intron | 35.0% |
| !! | GGGGGGAAAAGTATATTTTA+AGG | + | chr8_3:68761515-68761534 | None:intergenic | 35.0% |
| ! | CAATAAAATGGTACCGAAAC+TGG | - | chr8_3:68761586-68761605 | Msa1305330:intron | 35.0% |
| TGTTGGATAGCGATAATTCA+AGG | + | chr8_3:68761628-68761647 | None:intergenic | 35.0% | |
| TGAAAGAAACTGATGCCTAA+AGG | + | chr8_3:68761674-68761693 | None:intergenic | 35.0% | |
| TTGGAAACGATAGGTAAGTA+GGG | + | chr8_3:68761707-68761726 | None:intergenic | 35.0% | |
| TTTGGAAACGATAGGTAAGT+AGG | + | chr8_3:68761708-68761727 | None:intergenic | 35.0% | |
| GAGATATCATACTCTCTACT+TGG | - | chr8_3:68761865-68761884 | Msa1305330:intron | 35.0% | |
| ATTGCAATCTTCATTGACGT+TGG | + | chr8_3:68762111-68762130 | None:intergenic | 35.0% | |
| ! | CATAGATGTGATTTGTGTTC+TGG | + | chr8_3:68762172-68762191 | None:intergenic | 35.0% |
| AGTAGGACTATTGAGGTTTA+TGG | + | chr8_3:68762332-68762351 | None:intergenic | 35.0% | |
| TCAAGTAAGTAGGACTATTG+AGG | + | chr8_3:68762339-68762358 | None:intergenic | 35.0% | |
| ACTGAAGAGATATGGAATTG+AGG | - | chr8_3:68762566-68762585 | Msa1305330:intron | 35.0% | |
| CTGAAGAGATATGGAATTGA+GGG | - | chr8_3:68762567-68762586 | Msa1305330:intron | 35.0% | |
| !!! | TTGATGTTTTGTTTCCACAC+TGG | + | chr8_3:68762692-68762711 | None:intergenic | 35.0% |
| GAGCTTATTGGACAAGAATT+TGG | + | chr8_3:68762727-68762746 | None:intergenic | 35.0% | |
| ACAAACTACTTGGATTTAGC+AGG | - | chr8_3:68762894-68762913 | Msa1305330:intron | 35.0% | |
| GATTTAGCAGGATCTTGAAT+TGG | - | chr8_3:68762906-68762925 | Msa1305330:intron | 35.0% | |
| AATTGGCCAAGACTTTATTG+AGG | - | chr8_3:68762923-68762942 | Msa1305330:CDS | 35.0% | |
| AGTCAAGTCTTCCATAAAGA+GGG | + | chr8_3:68762956-68762975 | None:intergenic | 35.0% | |
| GCAAGATAACTTCTCTAAAC+AGG | - | chr8_3:68762978-68762997 | Msa1305330:CDS | 35.0% | |
| AACTTCTCTAAACAGGGTTA+TGG | - | chr8_3:68762985-68763004 | Msa1305330:CDS | 35.0% | |
| ACTTCTCTAAACAGGGTTAT+GGG | - | chr8_3:68762986-68763005 | Msa1305330:CDS | 35.0% | |
| ! | TTGCAAACAATAAAAGCACG+TGG | + | chr8_3:68763018-68763037 | None:intergenic | 35.0% |
| ATTGTTTGCAATGAAGACCT+TGG | - | chr8_3:68763027-68763046 | Msa1305330:CDS | 35.0% | |
| ! | CATCATTAATCCCAGCATTT+TGG | + | chr8_3:68763083-68763102 | None:intergenic | 35.0% |
| GAGAAACTTTATTGTAGAGG+TGG | - | chr8_3:68763279-68763298 | Msa1305330:exon | 35.0% | |
| ! | TTTAGAATCTGCTGGTCATG+TGG | - | chr8_3:68760108-68760127 | Msa1305330:CDS | 40.0% |
| ACTTAGCATAGCTCTTGCAA+TGG | - | chr8_3:68760282-68760301 | Msa1305330:CDS | 40.0% | |
| !! | GAAGCATTGTGTTGAATGTC+CGG | + | chr8_3:68760358-68760377 | None:intergenic | 40.0% |
| CTTCAATATCAAGCACGCAA+TGG | + | chr8_3:68760957-68760976 | None:intergenic | 40.0% | |
| CGTGCTTGATATTGAAGATG+CGG | - | chr8_3:68760960-68760979 | Msa1305330:intron | 40.0% | |
| ! | CGAAGCATAATGGGAAAATC+TGG | - | chr8_3:68761000-68761019 | Msa1305330:intron | 40.0% |
| CACTCATCCATCTACACAAA+TGG | + | chr8_3:68761065-68761084 | None:intergenic | 40.0% | |
| TTACTAGTGAGGGAAGAAGA+TGG | - | chr8_3:68761157-68761176 | Msa1305330:intron | 40.0% | |
| TGGTTGTGATCCAATGTAGA+CGG | - | chr8_3:68761177-68761196 | Msa1305330:intron | 40.0% | |
| TTGTTGTACACCGTCTACAT+TGG | + | chr8_3:68761190-68761209 | None:intergenic | 40.0% | |
| GTGGAGTAACACACATTTGT+TGG | + | chr8_3:68761645-68761664 | None:intergenic | 40.0% | |
| TTACTCCACAGTTCACCTTT+AGG | - | chr8_3:68761656-68761675 | Msa1305330:intron | 40.0% | |
| !!! | ATGGTTTTTTCGAACCTTGC+AGG | + | chr8_3:68762313-68762332 | None:intergenic | 40.0% |
| !! | GGAGTGTTGATAGAGCTTAT+TGG | + | chr8_3:68762739-68762758 | None:intergenic | 40.0% |
| TTAACGTGTAGTTACCTCAG+TGG | + | chr8_3:68762763-68762782 | None:intergenic | 40.0% | |
| GAGTCAAGTCTTCCATAAAG+AGG | + | chr8_3:68762957-68762976 | None:intergenic | 40.0% | |
| ACTGGATGATCCAAAATGCT+GGG | - | chr8_3:68763070-68763089 | Msa1305330:CDS | 40.0% | |
| ! | AAGCCACGTTTAGAATCTGC+TGG | - | chr8_3:68760100-68760119 | Msa1305330:exon | 45.0% |
| TGACCAGCAGATTCTAAACG+TGG | + | chr8_3:68760106-68760125 | None:intergenic | 45.0% | |
| GTTCTTGACCTTTCAGCTTC+TGG | - | chr8_3:68760136-68760155 | Msa1305330:CDS | 45.0% | |
| ! | AGTTGGTTCCAGAAGCTGAA+AGG | + | chr8_3:68760147-68760166 | None:intergenic | 45.0% |
| ! | GTGGCCATTAGCTTCAACAA+TGG | + | chr8_3:68760214-68760233 | None:intergenic | 45.0% |
| ATTCTTGTGGGTCACAGTCT+TGG | - | chr8_3:68760256-68760275 | Msa1305330:CDS | 45.0% | |
| TTTCCAGAAAAGGTTGCCGT+TGG | - | chr8_3:68760310-68760329 | Msa1305330:CDS | 45.0% | |
| ! | GTGTTTCTGAGTATTCACGG+TGG | + | chr8_3:68760673-68760692 | None:intergenic | 45.0% |
| ATAACCTGACCCTAGAGACA+TGG | - | chr8_3:68761129-68761148 | Msa1305330:intron | 45.0% | |
| !! | AAAACCATGTCTCTAGGGTC+AGG | + | chr8_3:68761136-68761155 | None:intergenic | 45.0% |
| !! | AGCATTTTTGTCGGTGGGTT+AGG | - | chr8_3:68761444-68761463 | Msa1305330:intron | 45.0% |
| TGATGCCTAAAGGTGAACTG+TGG | + | chr8_3:68761664-68761683 | None:intergenic | 45.0% | |
| !! | GTATATTGAGAGTACCCCGA+CGG | - | chr8_3:68762641-68762660 | Msa1305330:intron | 45.0% |
| CCAAGACTTTATTGAGGCCA+GGG | - | chr8_3:68762929-68762948 | Msa1305330:CDS | 45.0% | |
| CACTGGATGATCCAAAATGC+TGG | - | chr8_3:68763069-68763088 | Msa1305330:CDS | 45.0% | |
| GATCAAAGGGGCAGATCATA+TGG | - | chr8_3:68763110-68763129 | Msa1305330:CDS | 45.0% | |
| !!! | AAATTATTCTTTAAAAAAAT+CGG | + | chr8_3:68761335-68761354 | None:intergenic | 5.0% |
| !!! | TAAATTTTGTTATAAAAAAA+TGG | + | chr8_3:68762046-68762065 | None:intergenic | 5.0% |
| CTTGTACATGGTGCTTGCCA+TGG | - | chr8_3:68760055-68760074 | Msa1305330:three_prime_UTR | 50.0% | |
| TGTACCAACTCCAAGCACCA+TGG | + | chr8_3:68760075-68760094 | None:intergenic | 50.0% | |
| !! | TGGTGCTTGGAGTTGGTACA+AGG | - | chr8_3:68760075-68760094 | Msa1305330:three_prime_UTR | 50.0% |
| ! | ACACCAACGGCAACCTTTTC+TGG | + | chr8_3:68760316-68760335 | None:intergenic | 50.0% |
| !! | TGTAGGTGGATTCTAGGGTG+AGG | - | chr8_3:68760519-68760538 | Msa1305330:intron | 50.0% |
| !! | GTAGGTGGATTCTAGGGTGA+GGG | - | chr8_3:68760520-68760539 | Msa1305330:intron | 50.0% |
| GGCTCTATTAAGTCCCTCAC+CGG | - | chr8_3:68760541-68760560 | Msa1305330:CDS | 50.0% | |
| TCTATTAAGTCCCTCACCGG+TGG | - | chr8_3:68760544-68760563 | Msa1305330:CDS | 50.0% | |
| !! | GGTTAAGTTGAGTGGTCCAC+CGG | + | chr8_3:68760563-68760582 | None:intergenic | 50.0% |
| GCCTCTTAATAGTGCTCCAC+CGG | - | chr8_3:68761236-68761255 | Msa1305330:intron | 50.0% | |
| ! | ACCGGTGGAGCACTATTAAG+AGG | + | chr8_3:68761240-68761259 | None:intergenic | 50.0% |
| TTAATAGTGCTCCACCGGTG+AGG | - | chr8_3:68761241-68761260 | Msa1305330:intron | 50.0% | |
| TAATAGTGCTCCACCGGTGA+GGG | - | chr8_3:68761242-68761261 | Msa1305330:intron | 50.0% | |
| GGTCCAATTAAGTCCCTCAC+CGG | + | chr8_3:68761258-68761277 | None:intergenic | 50.0% | |
| ! | ATTGGTGGAGTCTAGGGTGA+GGG | + | chr8_3:68761279-68761298 | None:intergenic | 50.0% |
| ! | AATTGGTGGAGTCTAGGGTG+AGG | + | chr8_3:68761280-68761299 | None:intergenic | 50.0% |
| GGAGAAACACATCTCCTGCA+AGG | - | chr8_3:68762296-68762315 | Msa1305330:intron | 50.0% | |
| GACACTGAATTCTGCCAGTG+TGG | - | chr8_3:68762675-68762694 | Msa1305330:intron | 50.0% | |
| CTATCAACACTCCTCCACTG+AGG | - | chr8_3:68762746-68762765 | Msa1305330:intron | 50.0% | |
| ACGTGTAGTTACCTCAGTGG+AGG | + | chr8_3:68762760-68762779 | None:intergenic | 50.0% | |
| GCCAAGACTTTATTGAGGCC+AGG | - | chr8_3:68762928-68762947 | Msa1305330:CDS | 50.0% | |
| CCCTGGCCTCAATAAAGTCT+TGG | + | chr8_3:68762932-68762951 | None:intergenic | 50.0% | |
| TCTTCCATAAAGAGGGACCC+TGG | + | chr8_3:68762949-68762968 | None:intergenic | 50.0% | |
| ATGGTGCTTGCCATGGTGCT+TGG | - | chr8_3:68760062-68760081 | Msa1305330:three_prime_UTR | 55.0% | |
| CTTGCCATGGTGCTTGGAGT+TGG | - | chr8_3:68760068-68760087 | Msa1305330:three_prime_UTR | 55.0% | |
| CTTGTGGGTCACAGTCTTGG+AGG | - | chr8_3:68760259-68760278 | Msa1305330:CDS | 55.0% | |
| CACGGTGGAGAGAGTGAGAT+TGG | + | chr8_3:68760658-68760677 | None:intergenic | 55.0% | |
| CCAATTAAGTCCCTCACCGG+TGG | + | chr8_3:68761255-68761274 | None:intergenic | 55.0% | |
| CCACCGGTGAGGGACTTAAT+TGG | - | chr8_3:68761252-68761271 | Msa1305330:intron | 55.0% | |
| TGTCCAACCATTCAGCCGTC+GGG | + | chr8_3:68762659-68762678 | None:intergenic | 55.0% | |
| GTGTCCAACCATTCAGCCGT+CGG | + | chr8_3:68762660-68762679 | None:intergenic | 55.0% | |
| GTTGAGTGGTCCACCGGTGA+GGG | + | chr8_3:68760557-68760576 | None:intergenic | 60.0% | |
| AGTTGAGTGGTCCACCGGTG+AGG | + | chr8_3:68760558-68760577 | None:intergenic | 60.0% | |
| ! | AGAGTACCCCGACGGCTGAA+TGG | - | chr8_3:68762649-68762668 | Msa1305330:intron | 60.0% |
| TACCCCGACGGCTGAATGGT+TGG | - | chr8_3:68762653-68762672 | Msa1305330:intron | 60.0% | |
| GTCCAACCATTCAGCCGTCG+GGG | + | chr8_3:68762658-68762677 | None:intergenic | 60.0% | |
| GAGGCCAGGGTCCCTCTTTA+TGG | - | chr8_3:68762942-68762961 | Msa1305330:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 68759972 | 68763333 | 68759972 | ID=Msa1305330;Name=Msa1305330 |
| chr8_3 | mRNA | 68759972 | 68763333 | 68759972 | ID=Msa1305330-mRNA-1;Parent=Msa1305330;Name=Msa1305330-mRNA-1;_AED=0.10;_eAED=0.10;_QI=44|1|1|1|1|1|3|136|261 |
| chr8_3 | exon | 68759972 | 68760389 | 68759972 | ID=Msa1305330-mRNA-1:exon:21295;Parent=Msa1305330-mRNA-1 |
| chr8_3 | exon | 68760538 | 68760663 | 68760538 | ID=Msa1305330-mRNA-1:exon:21294;Parent=Msa1305330-mRNA-1 |
| chr8_3 | exon | 68762912 | 68763333 | 68762912 | ID=Msa1305330-mRNA-1:exon:21293;Parent=Msa1305330-mRNA-1 |
| chr8_3 | five_prime_UTR | 68763290 | 68763333 | 68763290 | ID=Msa1305330-mRNA-1:five_prime_utr;Parent=Msa1305330-mRNA-1 |
| chr8_3 | CDS | 68762912 | 68763289 | 68762912 | ID=Msa1305330-mRNA-1:cds;Parent=Msa1305330-mRNA-1 |
| chr8_3 | CDS | 68760538 | 68760663 | 68760538 | ID=Msa1305330-mRNA-1:cds;Parent=Msa1305330-mRNA-1 |
| chr8_3 | CDS | 68760108 | 68760389 | 68760108 | ID=Msa1305330-mRNA-1:cds;Parent=Msa1305330-mRNA-1 |
| chr8_3 | three_prime_UTR | 68759972 | 68760107 | 68759972 | ID=Msa1305330-mRNA-1:three_prime_utr;Parent=Msa1305330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
