Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305180 | RHN42187.1 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305180 | sp|Q6RYA0|SABP2_TOBAC | 59.608 | 255 | 99 | 1 | 10 | 260 | 5 | 259 | 4.93e-114 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305180 | A0A396GUA0 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090510 | Msa1305180 | 0.812808 | 3.518559e-51 | -8.615850e-47 |
| Msa0107400 | Msa1305180 | 0.805891 | 1.072233e-49 | -8.615850e-47 |
| Msa0641130 | Msa1305180 | 0.805269 | 1.448387e-49 | -8.615850e-47 |
| Msa0153980 | Msa1305180 | 0.801760 | 7.734737e-49 | -8.615850e-47 |
| Msa0164910 | Msa1305180 | 0.810826 | 9.504682e-51 | -8.615850e-47 |
| Msa0213540 | Msa1305180 | 0.838864 | 2.231468e-57 | -8.615850e-47 |
| Msa1267480 | Msa1305180 | 0.964316 | 3.572873e-123 | -8.615850e-47 |
| Msa1267510 | Msa1305180 | 0.963501 | 3.668678e-122 | -8.615850e-47 |
| Msa1305180 | Msa1305330 | 0.997863 | 8.362754e-251 | -8.615850e-47 |
| Msa1305180 | Msa1440190 | 0.801032 | 1.090046e-48 | -8.615850e-47 |
| Msa1305180 | Msa1449750 | 0.802127 | 6.502689e-49 | -8.615850e-47 |
| Msa1013070 | Msa1305180 | 0.813943 | 1.981855e-51 | -8.615850e-47 |
| Msa1062040 | Msa1305180 | 0.816278 | 6.005397e-52 | -8.615850e-47 |
| Msa1094280 | Msa1305180 | 0.819599 | 1.067136e-52 | -8.615850e-47 |
| Msa0331020 | Msa1305180 | 0.831573 | 1.546423e-55 | -8.615850e-47 |
| Msa1131230 | Msa1305180 | 0.983222 | 3.703700e-157 | -8.615850e-47 |
| Msa1203480 | Msa1305180 | 0.963454 | 4.185899e-122 | -8.615850e-47 |
| Msa0545050 | Msa1305180 | 0.811687 | 6.182178e-51 | -8.615850e-47 |
| Msa0600590 | Msa1305180 | 0.801384 | 9.237926e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305180 | MtrunA17_Chr8g0374141 | 96.154 | 260 | 10 | 0 | 1 | 260 | 43 | 302 | 0.0 | 528 |
| Msa1305180 | MtrunA17_Chr5g0402901 | 62.302 | 252 | 95 | 0 | 9 | 260 | 10 | 261 | 1.77e-116 | 334 |
| Msa1305180 | MtrunA17_Chr5g0402881 | 57.854 | 261 | 109 | 1 | 1 | 260 | 18 | 278 | 5.75e-109 | 316 |
| Msa1305180 | MtrunA17_Chr5g0402851 | 42.912 | 261 | 144 | 2 | 5 | 260 | 2 | 262 | 9.25e-74 | 226 |
| Msa1305180 | MtrunA17_Chr5g0402871 | 45.525 | 257 | 131 | 4 | 11 | 260 | 5 | 259 | 6.30e-73 | 223 |
| Msa1305180 | MtrunA17_Chr8g0336391 | 43.191 | 257 | 137 | 5 | 11 | 260 | 27 | 281 | 7.73e-69 | 214 |
| Msa1305180 | MtrunA17_Chr3g0104871 | 41.634 | 257 | 140 | 4 | 10 | 260 | 18 | 270 | 2.26e-66 | 207 |
| Msa1305180 | MtrunA17_Chr5g0402841 | 40.856 | 257 | 146 | 3 | 9 | 260 | 6 | 261 | 1.84e-65 | 204 |
| Msa1305180 | MtrunA17_Chr8g0336441 | 42.023 | 257 | 139 | 5 | 10 | 260 | 26 | 278 | 3.92e-63 | 199 |
| Msa1305180 | MtrunA17_Chr8g0336411 | 41.699 | 259 | 139 | 5 | 10 | 260 | 27 | 281 | 5.06e-62 | 196 |
| Msa1305180 | MtrunA17_Chr8g0336381 | 40.385 | 260 | 145 | 5 | 9 | 260 | 5 | 262 | 1.88e-60 | 192 |
| Msa1305180 | MtrunA17_Chr8g0336401 | 38.996 | 259 | 150 | 5 | 10 | 260 | 26 | 284 | 5.60e-59 | 189 |
| Msa1305180 | MtrunA17_Chr7g0219561 | 33.730 | 252 | 158 | 3 | 11 | 257 | 124 | 371 | 1.66e-37 | 135 |
| Msa1305180 | MtrunA17_Chr3g0077351 | 33.077 | 260 | 158 | 5 | 7 | 257 | 90 | 342 | 1.10e-36 | 132 |
| Msa1305180 | MtrunA17_Chr3g0128581 | 32.927 | 246 | 153 | 5 | 7 | 246 | 32 | 271 | 3.27e-34 | 125 |
| Msa1305180 | MtrunA17_Chr5g0428471 | 31.395 | 258 | 166 | 4 | 9 | 260 | 28 | 280 | 3.53e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1305180 | AT2G23620.1 | 54.086 | 257 | 114 | 2 | 9 | 261 | 7 | 263 | 2.59e-102 | 298 |
| Msa1305180 | AT2G23600.1 | 52.964 | 253 | 115 | 2 | 9 | 257 | 7 | 259 | 2.60e-94 | 278 |
| Msa1305180 | AT2G23610.1 | 52.734 | 256 | 117 | 3 | 9 | 260 | 7 | 262 | 3.30e-94 | 278 |
| Msa1305180 | AT2G23600.2 | 52.964 | 253 | 115 | 2 | 9 | 257 | 22 | 274 | 3.66e-94 | 278 |
| Msa1305180 | AT2G23590.1 | 47.638 | 254 | 128 | 1 | 7 | 260 | 23 | 271 | 8.07e-89 | 265 |
| Msa1305180 | AT4G37150.1 | 49.020 | 255 | 125 | 2 | 10 | 260 | 2 | 255 | 4.67e-88 | 262 |
| Msa1305180 | AT2G23580.1 | 49.805 | 257 | 124 | 2 | 9 | 260 | 6 | 262 | 6.41e-88 | 262 |
| Msa1305180 | AT5G10300.1 | 49.027 | 257 | 125 | 2 | 9 | 261 | 4 | 258 | 5.80e-87 | 259 |
| Msa1305180 | AT2G23550.1 | 48.638 | 257 | 127 | 2 | 9 | 260 | 6 | 262 | 9.50e-84 | 251 |
| Msa1305180 | AT2G23550.4 | 48.638 | 257 | 127 | 2 | 9 | 260 | 13 | 269 | 1.24e-83 | 251 |
| Msa1305180 | AT2G23560.1 | 46.063 | 254 | 135 | 2 | 9 | 260 | 6 | 259 | 4.83e-80 | 242 |
| Msa1305180 | AT2G23610.2 | 46.640 | 253 | 92 | 2 | 9 | 260 | 7 | 217 | 9.01e-78 | 234 |
| Msa1305180 | AT3G50440.1 | 43.478 | 253 | 139 | 2 | 12 | 260 | 22 | 274 | 7.98e-73 | 224 |
| Msa1305180 | AT2G23550.2 | 45.312 | 256 | 108 | 2 | 9 | 260 | 6 | 233 | 6.79e-70 | 215 |
| Msa1305180 | AT2G23600.3 | 52.439 | 164 | 74 | 2 | 9 | 168 | 22 | 185 | 5.33e-59 | 186 |
| Msa1305180 | AT2G23580.2 | 48.045 | 179 | 85 | 3 | 9 | 182 | 6 | 181 | 5.54e-53 | 171 |
| Msa1305180 | AT2G23570.1 | 48.315 | 178 | 88 | 1 | 87 | 260 | 1 | 178 | 6.65e-53 | 170 |
| Msa1305180 | AT2G23550.3 | 47.273 | 165 | 82 | 2 | 9 | 168 | 13 | 177 | 2.32e-50 | 164 |
| Msa1305180 | AT5G10300.2 | 47.590 | 166 | 81 | 2 | 9 | 170 | 4 | 167 | 1.38e-47 | 157 |
| Msa1305180 | AT4G37140.1 | 54.701 | 117 | 53 | 0 | 10 | 126 | 2 | 118 | 2.26e-45 | 149 |
| Msa1305180 | AT4G09900.1 | 33.074 | 257 | 156 | 5 | 10 | 257 | 97 | 346 | 1.36e-39 | 140 |
| Msa1305180 | AT1G26360.1 | 32.669 | 251 | 164 | 2 | 10 | 257 | 188 | 436 | 3.17e-39 | 142 |
| Msa1305180 | AT1G33990.1 | 32.443 | 262 | 164 | 5 | 3 | 257 | 90 | 345 | 4.51e-39 | 139 |
| Msa1305180 | AT3G29770.1 | 35.294 | 255 | 150 | 5 | 11 | 257 | 138 | 385 | 1.01e-37 | 137 |
| Msa1305180 | AT5G58310.1 | 32.700 | 263 | 160 | 5 | 7 | 257 | 1 | 258 | 2.20e-37 | 132 |
| Msa1305180 | AT4G37140.2 | 59.341 | 91 | 37 | 0 | 10 | 100 | 2 | 92 | 3.50e-37 | 127 |
| Msa1305180 | AT1G69240.1 | 31.518 | 257 | 161 | 6 | 10 | 257 | 186 | 436 | 1.11e-36 | 135 |
| Msa1305180 | AT4G16690.1 | 31.707 | 246 | 153 | 4 | 11 | 249 | 12 | 249 | 2.42e-33 | 122 |
| Msa1305180 | AT3G10870.1 | 30.738 | 244 | 157 | 5 | 11 | 246 | 20 | 259 | 8.79e-31 | 115 |
| Msa1305180 | AT3G29770.2 | 40.278 | 72 | 43 | 0 | 11 | 82 | 138 | 209 | 1.94e-12 | 66.2 |
Find 71 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCATTAATCCCAGCATTT+TGG | 0.157812 | 8_3:+68512621 | None:intergenic |
| GAGCTTATTGGACAAGAATT+TGG | 0.162838 | 8_3:+68512977 | None:intergenic |
| GAGGCCAGGGTCCCTCTTTA+TGG | 0.202954 | 8_3:-68512759 | Msa1305180:CDS |
| GTTCTTGACCTTTCAGCTTC+TGG | 0.234804 | 8_3:-68515568 | Msa1305180:CDS |
| AACAAAACATCAATGTTCTT+TGG | 0.296879 | 8_3:-68513002 | Msa1305180:CDS |
| GCAAGATAACTTCTCTAAAC+AGG | 0.300900 | 8_3:-68512723 | Msa1305180:CDS |
| ACATGCTGATTCCTTTATTT+CGG | 0.312733 | 8_3:+68512455 | None:intergenic |
| TGAAGTTTAGCTTAATTTGT+TGG | 0.339405 | 8_3:-68512498 | Msa1305180:three_prime_UTR |
| AGCTTATTGGACAAGAATTT+GGG | 0.339872 | 8_3:+68512978 | None:intergenic |
| AACTTCTCTAAACAGGGTTA+TGG | 0.360676 | 8_3:-68512716 | Msa1305180:CDS |
| ATTCTTGTGGGTCACAGTCT+TGG | 0.390920 | 8_3:-68515448 | Msa1305180:CDS |
| GGAGTGTTGATAGAGCTTAT+TGG | 0.392660 | 8_3:+68512965 | None:intergenic |
| ACTTCTCTAAACAGGGTTAT+GGG | 0.399672 | 8_3:-68512715 | Msa1305180:CDS |
| AATGGAACAATTTCCAGAAA+AGG | 0.417631 | 8_3:-68515404 | Msa1305180:CDS |
| ATCCAGTGTTGAAATTTCAA+TGG | 0.421026 | 8_3:+68512647 | None:intergenic |
| GATTTAGCAGGATCTTGAAT+TGG | 0.423617 | 8_3:-68512795 | Msa1305180:intron |
| TGAACCATTGTTGAAGCTAA+TGG | 0.426644 | 8_3:-68515497 | Msa1305180:CDS |
| ATCTTCAAGTTTCTTCAAGT+TGG | 0.431463 | 8_3:+68515543 | None:intergenic |
| CTTGTGGGTCACAGTCTTGG+AGG | 0.449534 | 8_3:-68515445 | Msa1305180:CDS |
| GTGCACAAAATTTAATTGCT+AGG | 0.449601 | 8_3:-68515684 | Msa1305180:CDS |
| TGCTTCTTATGTCATGGAAA+AGG | 0.451368 | 8_3:-68515332 | Msa1305180:intron |
| CACTGGATGATCCAAAATGC+TGG | 0.456893 | 8_3:-68512632 | Msa1305180:CDS |
| GATCAAAGGGGCAGATCATA+TGG | 0.460208 | 8_3:-68512591 | Msa1305180:CDS |
| TGTCCAACCATTCAGCCGTC+GGG | 0.460887 | 8_3:+68513045 | None:intergenic |
| ATGATGTATATGAGATCAAA+GGG | 0.461047 | 8_3:-68512604 | Msa1305180:CDS |
| ATGGTGCTTGCCATGGTGCT+TGG | 0.470545 | 8_3:-68515642 | Msa1305180:CDS |
| TTCCATTGAAATTTCAACAC+TGG | 0.470781 | 8_3:-68512649 | Msa1305180:CDS |
| GCCAAGACTTTATTGAGGCC+AGG | 0.472046 | 8_3:-68512773 | Msa1305180:CDS |
| CACAATTCCACCAAATGAAA+AGG | 0.475812 | 8_3:-68515473 | Msa1305180:CDS |
| CTTGCCATGGTGCTTGGAGT+TGG | 0.476673 | 8_3:-68515636 | Msa1305180:CDS |
| GAAGCATTGTGTTGAATGTC+CGG | 0.482394 | 8_3:+68515349 | None:intergenic |
| CCCTGGCCTCAATAAAGTCT+TGG | 0.486588 | 8_3:+68512772 | None:intergenic |
| ACACAATGCTTCTTATGTCA+TGG | 0.491092 | 8_3:-68515338 | Msa1305180:CDS |
| AATGAAAAGGTGATTCTTGT+GGG | 0.497441 | 8_3:-68515460 | Msa1305180:CDS |
| CTTGTACATGGTGCTTGCCA+TGG | 0.498303 | 8_3:-68515649 | Msa1305180:CDS |
| CATAATGATTATTGTTGTTG+TGG | 0.503508 | 8_3:+68515708 | None:intergenic |
| TACCCCGACGGCTGAATGGT+TGG | 0.505808 | 8_3:-68513048 | Msa1305180:CDS |
| AGAGTACCCCGACGGCTGAA+TGG | 0.512702 | 8_3:-68513052 | Msa1305180:CDS |
| ATTGTTTGCAATGAAGACCT+TGG | 0.520269 | 8_3:-68512674 | Msa1305180:CDS |
| AGAGAATTACATAGTTCTTG+TGG | 0.522605 | 8_3:+68512554 | None:intergenic |
| CCAAGACTTTATTGAGGCCA+GGG | 0.522924 | 8_3:-68512772 | Msa1305180:CDS |
| GAAATTTCAATGGAATTCCA+AGG | 0.525367 | 8_3:+68512657 | None:intergenic |
| GTGTCCAACCATTCAGCCGT+CGG | 0.529692 | 8_3:+68513044 | None:intergenic |
| AAGCATTATGTTCTTGTACA+TGG | 0.531450 | 8_3:-68515661 | Msa1305180:CDS |
| AATGATGTATATGAGATCAA+AGG | 0.543714 | 8_3:-68512605 | Msa1305180:CDS |
| GAGAAACTTTATTGTAGAGG+TGG | 0.543747 | 8_3:-68512422 | Msa1305180:three_prime_UTR |
| AAATGAAAAGGTGATTCTTG+TGG | 0.544198 | 8_3:-68515461 | Msa1305180:CDS |
| TTTCCAGAAAAGGTTGCCGT+TGG | 0.552011 | 8_3:-68515394 | Msa1305180:CDS |
| AATTGGCCAAGACTTTATTG+AGG | 0.557607 | 8_3:-68512778 | Msa1305180:CDS |
| TGTGAGAAACTTTATTGTAG+AGG | 0.558702 | 8_3:-68512425 | Msa1305180:three_prime_UTR |
| TGGTGCTTGGAGTTGGTACA+AGG | 0.561033 | 8_3:-68515629 | Msa1305180:CDS |
| GTGGCCATTAGCTTCAACAA+TGG | 0.573860 | 8_3:+68515493 | None:intergenic |
| GAGTCAAGTCTTCCATAAAG+AGG | 0.579389 | 8_3:+68512747 | None:intergenic |
| AGTTGGTTCCAGAAGCTGAA+AGG | 0.584796 | 8_3:+68515560 | None:intergenic |
| AAGCCACGTTTAGAATCTGC+TGG | 0.586149 | 8_3:-68515604 | Msa1305180:CDS |
| ACTGGATGATCCAAAATGCT+GGG | 0.589459 | 8_3:-68512631 | Msa1305180:CDS |
| CAAGATAACTTCTCTAAACA+GGG | 0.605122 | 8_3:-68512722 | Msa1305180:CDS |
| ACTTAGCATAGCTCTTGCAA+TGG | 0.605259 | 8_3:-68515422 | Msa1305180:CDS |
| AGTCAAGTCTTCCATAAAGA+GGG | 0.612508 | 8_3:+68512748 | None:intergenic |
| TTTAGAATCTGCTGGTCATG+TGG | 0.623515 | 8_3:-68515596 | Msa1305180:CDS |
| GACACTGAATTCTGCCAGTG+TGG | 0.627184 | 8_3:-68513026 | Msa1305180:CDS |
| TCTTCCATAAAGAGGGACCC+TGG | 0.632528 | 8_3:+68512755 | None:intergenic |
| GTCCAACCATTCAGCCGTCG+GGG | 0.648788 | 8_3:+68513046 | None:intergenic |
| ACGTGTAGTTACCTCAGTGG+AGG | 0.650895 | 8_3:+68512944 | None:intergenic |
| AGCTGTTAAGAAAACACCAA+CGG | 0.651976 | 8_3:+68515378 | None:intergenic |
| TTAACGTGTAGTTACCTCAG+TGG | 0.666283 | 8_3:+68512941 | None:intergenic |
| TTGCAAACAATAAAAGCACG+TGG | 0.692906 | 8_3:+68512686 | None:intergenic |
| TGTACCAACTCCAAGCACCA+TGG | 0.696634 | 8_3:+68515632 | None:intergenic |
| TGACCAGCAGATTCTAAACG+TGG | 0.719220 | 8_3:+68515601 | None:intergenic |
| TGATGTATATGAGATCAAAG+GGG | 0.769291 | 8_3:-68512603 | Msa1305180:CDS |
| CTATCAACACTCCTCCACTG+AGG | 0.776664 | 8_3:-68512955 | Msa1305180:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAAAACATAAAAAG+GGG | + | chr8_3:68513955-68513974 | None:intergenic | 10.0% |
| !! | CATATAATAAAACATAAAAA+GGG | + | chr8_3:68513956-68513975 | None:intergenic | 10.0% |
| !! | ACATATAATAAAACATAAAA+AGG | + | chr8_3:68513957-68513976 | None:intergenic | 10.0% |
| !!! | AAATACATTTTATTCATTTA+TGG | + | chr8_3:68514318-68514337 | None:intergenic | 10.0% |
| !!! | CATAATAAGTAATTTTTATT+TGG | + | chr8_3:68514402-68514421 | None:intergenic | 10.0% |
| !! | TTTATAACAAAATTTAGATT+AGG | - | chr8_3:68514471-68514490 | Msa1305180:intron | 10.0% |
| !! | TTATAACAAAATTTAGATTA+GGG | - | chr8_3:68514472-68514491 | Msa1305180:intron | 10.0% |
| !! | ACAAAAAATAAGATTAATAA+TGG | + | chr8_3:68515028-68515047 | None:intergenic | 10.0% |
| !!! | TAGTTTTTATGAAATTTTGT+AGG | - | chr8_3:68512920-68512939 | Msa1305180:intron | 15.0% |
| !!! | ATAAGTCTTATTTAATCTAA+CGG | + | chr8_3:68513002-68513021 | None:intergenic | 15.0% |
| !! | GAAAATAAATTAAAAAGTTG+TGG | + | chr8_3:68513136-68513155 | None:intergenic | 15.0% |
| !! | TACTTCAGAAAATAATATAA+GGG | + | chr8_3:68513330-68513349 | None:intergenic | 15.0% |
| !! | TTACTTCAGAAAATAATATA+AGG | + | chr8_3:68513331-68513350 | None:intergenic | 15.0% |
| !!! | GAATTTGTAAAATTTTGTTA+TGG | - | chr8_3:68513443-68513462 | Msa1305180:intron | 15.0% |
| !! | ATACATTTAGTATACAAAAT+TGG | + | chr8_3:68513718-68513737 | None:intergenic | 15.0% |
| !! | TATAATAAAACATAAAAAGG+GGG | + | chr8_3:68513954-68513973 | None:intergenic | 15.0% |
| !! | CCTATATTTATAAAAACAAA+TGG | + | chr8_3:68514659-68514678 | None:intergenic | 15.0% |
| !!! | CCATTTGTTTTTATAAATAT+AGG | - | chr8_3:68514656-68514675 | Msa1305180:intron | 15.0% |
| !! | TCACAAATATGATTTCTATA+TGG | - | chr8_3:68512876-68512895 | Msa1305180:intron | 20.0% |
| !!! | TTTTTATGAAATTTTGTAGG+TGG | - | chr8_3:68512923-68512942 | Msa1305180:intron | 20.0% |
| !!! | TTTCCATTTTTTTTTGTCAA+TGG | + | chr8_3:68513281-68513300 | None:intergenic | 20.0% |
| !!! | TGGAAAATTTGAGTTATAAA+AGG | + | chr8_3:68513357-68513376 | None:intergenic | 20.0% |
| !!! | TAACTATTTAGCATTTTTGT+CGG | - | chr8_3:68513856-68513875 | Msa1305180:intron | 20.0% |
| !! | ATAATAAAACATAAAAAGGG+GGG | + | chr8_3:68513953-68513972 | None:intergenic | 20.0% |
| !! | ATTTGTCCTTTACAATAAAA+TGG | - | chr8_3:68513995-68514014 | Msa1305180:intron | 20.0% |
| !!! | AGTTAAATTCTTGATACTTT+TGG | + | chr8_3:68514147-68514166 | None:intergenic | 20.0% |
| !! | TCATACAAGAAAAATAGATT+AGG | - | chr8_3:68514696-68514715 | Msa1305180:intron | 20.0% |
| !! | TGACAATTAAAAAGTAATGA+AGG | + | chr8_3:68514878-68514897 | None:intergenic | 20.0% |
| !! | TTGAAGTTTCCATTAAAAAA+TGG | - | chr8_3:68515266-68515285 | Msa1305180:intron | 20.0% |
| !!! | AATTGTACTCCATTTTTTAA+TGG | + | chr8_3:68515278-68515297 | None:intergenic | 20.0% |
| !! | CATAATGATTATTGTTGTTG+TGG | + | chr8_3:68512417-68512436 | None:intergenic | 25.0% |
| ! | TCAATGGTGATATTTATTGT+GGG | + | chr8_3:68513265-68513284 | None:intergenic | 25.0% |
| ! | TCACCATTGACAAAAAAAAA+TGG | - | chr8_3:68513275-68513294 | Msa1305180:intron | 25.0% |
| !!! | AAAATTTTGTTATGGAACGA+AGG | - | chr8_3:68513451-68513470 | Msa1305180:intron | 25.0% |
| !! | TCAATTTTTAACACAGACAA+TGG | - | chr8_3:68513519-68513538 | Msa1305180:intron | 25.0% |
| ! | CATTTAGTATACAAAATTGG+TGG | + | chr8_3:68513715-68513734 | None:intergenic | 25.0% |
| !! | TTCCTCTTAATTTGAATTTG+TGG | - | chr8_3:68514440-68514459 | Msa1305180:intron | 25.0% |
| ! | ATATAAAACGACAAGTAAGT+AGG | + | chr8_3:68514814-68514833 | None:intergenic | 25.0% |
| !! | TCTAAGACAATTAAGTAAAC+TGG | + | chr8_3:68514917-68514936 | None:intergenic | 25.0% |
| !!! | AATTTTAAAACGACAAGCAA+GGG | + | chr8_3:68514951-68514970 | None:intergenic | 25.0% |
| ! | CATTAATTACTGAAGAGATA+TGG | - | chr8_3:68514979-68514998 | Msa1305180:intron | 25.0% |
| ! | AACAAAACATCAATGTTCTT+TGG | - | chr8_3:68515120-68515139 | Msa1305180:intron | 25.0% |
| ! | ACTAATAAAGACAAACTACT+TGG | - | chr8_3:68515305-68515324 | Msa1305180:intron | 25.0% |
| ! | AATGATGTATATGAGATCAA+AGG | - | chr8_3:68515517-68515536 | Msa1305180:CDS | 25.0% |
| ! | ATGATGTATATGAGATCAAA+GGG | - | chr8_3:68515518-68515537 | Msa1305180:CDS | 25.0% |
| !!! | TGAAGTTTAGCTTAATTTGT+TGG | - | chr8_3:68515624-68515643 | Msa1305180:CDS | 25.0% |
| !!! | TTACTTTTTGTCCGAAATAA+AGG | - | chr8_3:68515656-68515675 | Msa1305180:CDS | 25.0% |
| GTGCACAAAATTTAATTGCT+AGG | - | chr8_3:68512438-68512457 | Msa1305180:three_prime_UTR | 30.0% | |
| AAGCATTATGTTCTTGTACA+TGG | - | chr8_3:68512461-68512480 | Msa1305180:three_prime_UTR | 30.0% | |
| ! | ATCTTCAAGTTTCTTCAAGT+TGG | + | chr8_3:68512582-68512601 | None:intergenic | 30.0% |
| ! | ACAAGAATCACCTTTTCATT+TGG | + | chr8_3:68512662-68512681 | None:intergenic | 30.0% |
| AAATGAAAAGGTGATTCTTG+TGG | - | chr8_3:68512661-68512680 | Msa1305180:CDS | 30.0% | |
| AATGAAAAGGTGATTCTTGT+GGG | - | chr8_3:68512662-68512681 | Msa1305180:CDS | 30.0% | |
| AATGGAACAATTTCCAGAAA+AGG | - | chr8_3:68512718-68512737 | Msa1305180:CDS | 30.0% | |
| ! | TTTCTTAACAGCTTTTATGC+CGG | - | chr8_3:68512754-68512773 | Msa1305180:CDS | 30.0% |
| !! | AAATTTTGTAGGTGGATTCT+AGG | - | chr8_3:68512931-68512950 | Msa1305180:intron | 30.0% |
| !! | AATTTTGTAGGTGGATTCTA+GGG | - | chr8_3:68512932-68512951 | Msa1305180:intron | 30.0% |
| GAAAGAACATTAATTCAGTG+TGG | + | chr8_3:68513045-68513064 | None:intergenic | 30.0% | |
| TCGAGTACTTACATTAGAAA+AGG | + | chr8_3:68513165-68513184 | None:intergenic | 30.0% | |
| TTCTAATGTAAGTACTCGAT+AGG | - | chr8_3:68513166-68513185 | Msa1305180:intron | 30.0% | |
| TGACATGAGAAAGACATTAA+TGG | + | chr8_3:68513233-68513252 | None:intergenic | 30.0% | |
| GTCAATGGTGATATTTATTG+TGG | + | chr8_3:68513266-68513285 | None:intergenic | 30.0% | |
| TGAATTTCCATTTGTGTAGA+TGG | - | chr8_3:68513476-68513495 | Msa1305180:intron | 30.0% | |
| GTAAAAAAACCATGTCTCTA+GGG | + | chr8_3:68513562-68513581 | None:intergenic | 30.0% | |
| AGTAAAAAAACCATGTCTCT+AGG | + | chr8_3:68513563-68513582 | None:intergenic | 30.0% | |
| !!! | ACATGGTTTTTTTACTAGTG+AGG | - | chr8_3:68513567-68513586 | Msa1305180:intron | 30.0% |
| !!! | CATGGTTTTTTTACTAGTGA+GGG | - | chr8_3:68513568-68513587 | Msa1305180:intron | 30.0% |
| ! | AAATATTTACAGAGTGTCTC+AGG | - | chr8_3:68513785-68513804 | Msa1305180:intron | 30.0% |
| CAGGACACTTAAAAAGATAT+CGG | - | chr8_3:68513804-68513823 | Msa1305180:intron | 30.0% | |
| AGGACACTTAAAAAGATATC+GGG | - | chr8_3:68513805-68513824 | Msa1305180:intron | 30.0% | |
| ! | TATTTAGCATTTTTGTCGGT+GGG | - | chr8_3:68513860-68513879 | Msa1305180:intron | 30.0% |
| GAAGAACATGTAATAGACAA+GGG | + | chr8_3:68513910-68513929 | None:intergenic | 30.0% | |
| AGAAGAACATGTAATAGACA+AGG | + | chr8_3:68513911-68513930 | None:intergenic | 30.0% | |
| !! | GGGGGAAAAGTATATTTTAA+GGG | + | chr8_3:68513935-68513954 | None:intergenic | 30.0% |
| ! | TCGGTACCATTTTATTGTAA+AGG | + | chr8_3:68514004-68514023 | None:intergenic | 30.0% |
| AAAGCAAAACTTTCCAGTTT+CGG | + | chr8_3:68514023-68514042 | None:intergenic | 30.0% | |
| !! | TTGATACTTTTGGAAACGAT+AGG | + | chr8_3:68514137-68514156 | None:intergenic | 30.0% |
| ! | ATTCGTTCGAGTTTAAATTC+AGG | - | chr8_3:68514228-68514247 | Msa1305180:intron | 30.0% |
| GACCACAAATTCAAATTAAG+AGG | + | chr8_3:68514445-68514464 | None:intergenic | 30.0% | |
| GATTCTCTCAAACTTTACAT+GGG | + | chr8_3:68514508-68514527 | None:intergenic | 30.0% | |
| TGATTCTCTCAAACTTTACA+TGG | + | chr8_3:68514509-68514528 | None:intergenic | 30.0% | |
| TGCAGTTGACACAAATTAAA+AGG | + | chr8_3:68514627-68514646 | None:intergenic | 30.0% | |
| TGACTTGAATTCAAGTAAGT+AGG | + | chr8_3:68514770-68514789 | None:intergenic | 30.0% | |
| AATTGTCACATTTACACTTG+TGG | - | chr8_3:68514890-68514909 | Msa1305180:intron | 30.0% | |
| !!! | GAATTTTAAAACGACAAGCA+AGG | + | chr8_3:68514952-68514971 | None:intergenic | 30.0% |
| AGCTTATTGGACAAGAATTT+GGG | + | chr8_3:68515147-68515166 | None:intergenic | 30.0% | |
| TATAGTACTAGTATGAGACA+AGG | + | chr8_3:68515220-68515239 | None:intergenic | 30.0% | |
| CAAGATAACTTCTCTAAACA+GGG | - | chr8_3:68515400-68515419 | Msa1305180:CDS | 30.0% | |
| GAAATTTCAATGGAATTCCA+AGG | + | chr8_3:68515468-68515487 | None:intergenic | 30.0% | |
| TTCCATTGAAATTTCAACAC+TGG | - | chr8_3:68515473-68515492 | Msa1305180:CDS | 30.0% | |
| ! | ATCCAGTGTTGAAATTTCAA+TGG | + | chr8_3:68515478-68515497 | None:intergenic | 30.0% |
| TGATGTATATGAGATCAAAG+GGG | - | chr8_3:68515519-68515538 | Msa1305180:CDS | 30.0% | |
| AGAGAATTACATAGTTCTTG+TGG | + | chr8_3:68515571-68515590 | None:intergenic | 30.0% | |
| !! | ACATGCTGATTCCTTTATTT+CGG | + | chr8_3:68515670-68515689 | None:intergenic | 30.0% |
| TGTGAGAAACTTTATTGTAG+AGG | - | chr8_3:68515697-68515716 | Msa1305180:exon | 30.0% | |
| TGAACCATTGTTGAAGCTAA+TGG | - | chr8_3:68512625-68512644 | Msa1305180:CDS | 35.0% | |
| !! | CTTTTCATTTGGTGGAATTG+TGG | + | chr8_3:68512651-68512670 | None:intergenic | 35.0% |
| CACAATTCCACCAAATGAAA+AGG | - | chr8_3:68512649-68512668 | Msa1305180:CDS | 35.0% | |
| ! | AGAATCACCTTTTCATTTGG+TGG | + | chr8_3:68512659-68512678 | None:intergenic | 35.0% |
| AGCTGTTAAGAAAACACCAA+CGG | + | chr8_3:68512747-68512766 | None:intergenic | 35.0% | |
| ACACAATGCTTCTTATGTCA+TGG | - | chr8_3:68512784-68512803 | Msa1305180:CDS | 35.0% | |
| TGCTTCTTATGTCATGGAAA+AGG | - | chr8_3:68512790-68512809 | Msa1305180:intron | 35.0% | |
| !! | AATCTAACGGTTAAGTTGAG+TGG | + | chr8_3:68512989-68513008 | None:intergenic | 35.0% |
| AAGACTTATGCGATCTCATT+AGG | - | chr8_3:68513013-68513032 | Msa1305180:CDS | 35.0% | |
| ! | TCAGTGTTTCTGAGTATTCA+CGG | + | chr8_3:68513094-68513113 | None:intergenic | 35.0% |
| CATGAGAAAGACATTAATGG+AGG | + | chr8_3:68513230-68513249 | None:intergenic | 35.0% | |
| ATTTCACCATCGAAGCATAA+TGG | - | chr8_3:68513410-68513429 | Msa1305180:intron | 35.0% | |
| TTTCACCATCGAAGCATAAT+GGG | - | chr8_3:68513411-68513430 | Msa1305180:intron | 35.0% | |
| ! | TTTTTCCCATTATGCTTCGA+TGG | + | chr8_3:68513419-68513438 | None:intergenic | 35.0% |
| ! | GAAGCATAATGGGAAAAATC+TGG | - | chr8_3:68513421-68513440 | Msa1305180:intron | 35.0% |
| TTTAACACAGACAATGGTTG+TGG | - | chr8_3:68513525-68513544 | Msa1305180:intron | 35.0% | |
| TACAAAATTGGTGGAGTCTA+GGG | + | chr8_3:68513706-68513725 | None:intergenic | 35.0% | |
| ATACAAAATTGGTGGAGTCT+AGG | + | chr8_3:68513707-68513726 | None:intergenic | 35.0% | |
| GGACACTTAAAAAGATATCG+GGG | - | chr8_3:68513806-68513825 | Msa1305180:intron | 35.0% | |
| ! | CTATTTAGCATTTTTGTCGG+TGG | - | chr8_3:68513859-68513878 | Msa1305180:intron | 35.0% |
| !! | GGGGGGAAAAGTATATTTTA+AGG | + | chr8_3:68513936-68513955 | None:intergenic | 35.0% |
| ! | CAATAAAATGGTACCGAAAC+TGG | - | chr8_3:68514007-68514026 | Msa1305180:intron | 35.0% |
| TGTTGGATAGCGATAATTCA+AGG | + | chr8_3:68514049-68514068 | None:intergenic | 35.0% | |
| TGAAAGAAACTGATGCCTAA+AGG | + | chr8_3:68514095-68514114 | None:intergenic | 35.0% | |
| TTGGAAACGATAGGTAAGTA+GGG | + | chr8_3:68514128-68514147 | None:intergenic | 35.0% | |
| TTTGGAAACGATAGGTAAGT+AGG | + | chr8_3:68514129-68514148 | None:intergenic | 35.0% | |
| GAGATATCATACTCTCTACT+TGG | - | chr8_3:68514286-68514305 | Msa1305180:intron | 35.0% | |
| ATTGCAATCTTCATTGACGT+TGG | + | chr8_3:68514532-68514551 | None:intergenic | 35.0% | |
| ! | CATAGATGTGATTTGTGTTC+TGG | + | chr8_3:68514593-68514612 | None:intergenic | 35.0% |
| AGTAGGACTATTGAGGTTTA+TGG | + | chr8_3:68514753-68514772 | None:intergenic | 35.0% | |
| TCAAGTAAGTAGGACTATTG+AGG | + | chr8_3:68514760-68514779 | None:intergenic | 35.0% | |
| ACTGAAGAGATATGGAATTG+AGG | - | chr8_3:68514987-68515006 | Msa1305180:intron | 35.0% | |
| CTGAAGAGATATGGAATTGA+GGG | - | chr8_3:68514988-68515007 | Msa1305180:intron | 35.0% | |
| !!! | TTGATGTTTTGTTTCCACAC+TGG | + | chr8_3:68515113-68515132 | None:intergenic | 35.0% |
| GAGCTTATTGGACAAGAATT+TGG | + | chr8_3:68515148-68515167 | None:intergenic | 35.0% | |
| ACAAACTACTTGGATTTAGC+AGG | - | chr8_3:68515315-68515334 | Msa1305180:intron | 35.0% | |
| GATTTAGCAGGATCTTGAAT+TGG | - | chr8_3:68515327-68515346 | Msa1305180:intron | 35.0% | |
| AATTGGCCAAGACTTTATTG+AGG | - | chr8_3:68515344-68515363 | Msa1305180:CDS | 35.0% | |
| AGTCAAGTCTTCCATAAAGA+GGG | + | chr8_3:68515377-68515396 | None:intergenic | 35.0% | |
| GCAAGATAACTTCTCTAAAC+AGG | - | chr8_3:68515399-68515418 | Msa1305180:CDS | 35.0% | |
| AACTTCTCTAAACAGGGTTA+TGG | - | chr8_3:68515406-68515425 | Msa1305180:CDS | 35.0% | |
| ACTTCTCTAAACAGGGTTAT+GGG | - | chr8_3:68515407-68515426 | Msa1305180:CDS | 35.0% | |
| ! | TTGCAAACAATAAAAGCACG+TGG | + | chr8_3:68515439-68515458 | None:intergenic | 35.0% |
| ATTGTTTGCAATGAAGACCT+TGG | - | chr8_3:68515448-68515467 | Msa1305180:CDS | 35.0% | |
| ! | CATCATTAATCCCAGCATTT+TGG | + | chr8_3:68515504-68515523 | None:intergenic | 35.0% |
| GAGAAACTTTATTGTAGAGG+TGG | - | chr8_3:68515700-68515719 | Msa1305180:exon | 35.0% | |
| ! | TTTAGAATCTGCTGGTCATG+TGG | - | chr8_3:68512526-68512545 | Msa1305180:CDS | 40.0% |
| ACTTAGCATAGCTCTTGCAA+TGG | - | chr8_3:68512700-68512719 | Msa1305180:CDS | 40.0% | |
| !! | GAAGCATTGTGTTGAATGTC+CGG | + | chr8_3:68512776-68512795 | None:intergenic | 40.0% |
| CTTCAATATCAAGCACGCAA+TGG | + | chr8_3:68513377-68513396 | None:intergenic | 40.0% | |
| CGTGCTTGATATTGAAGATG+CGG | - | chr8_3:68513380-68513399 | Msa1305180:intron | 40.0% | |
| CACTCATCCATCTACACAAA+TGG | + | chr8_3:68513486-68513505 | None:intergenic | 40.0% | |
| TTACTAGTGAGGGAAGAAGA+TGG | - | chr8_3:68513578-68513597 | Msa1305180:intron | 40.0% | |
| TGGTTGTGATCCAATGTAGA+CGG | - | chr8_3:68513598-68513617 | Msa1305180:intron | 40.0% | |
| TTGTTGTACACCGTCTACAT+TGG | + | chr8_3:68513611-68513630 | None:intergenic | 40.0% | |
| GTGGAGTAACACACATTTGT+TGG | + | chr8_3:68514066-68514085 | None:intergenic | 40.0% | |
| TTACTCCACAGTTCACCTTT+AGG | - | chr8_3:68514077-68514096 | Msa1305180:intron | 40.0% | |
| !!! | ATGGTTTTTTCGAACCTTGC+AGG | + | chr8_3:68514734-68514753 | None:intergenic | 40.0% |
| !! | GGAGTGTTGATAGAGCTTAT+TGG | + | chr8_3:68515160-68515179 | None:intergenic | 40.0% |
| TTAACGTGTAGTTACCTCAG+TGG | + | chr8_3:68515184-68515203 | None:intergenic | 40.0% | |
| GAGTCAAGTCTTCCATAAAG+AGG | + | chr8_3:68515378-68515397 | None:intergenic | 40.0% | |
| ACTGGATGATCCAAAATGCT+GGG | - | chr8_3:68515491-68515510 | Msa1305180:CDS | 40.0% | |
| ! | AAGCCACGTTTAGAATCTGC+TGG | - | chr8_3:68512518-68512537 | Msa1305180:exon | 45.0% |
| TGACCAGCAGATTCTAAACG+TGG | + | chr8_3:68512524-68512543 | None:intergenic | 45.0% | |
| GTTCTTGACCTTTCAGCTTC+TGG | - | chr8_3:68512554-68512573 | Msa1305180:CDS | 45.0% | |
| ! | AGTTGGTTCCAGAAGCTGAA+AGG | + | chr8_3:68512565-68512584 | None:intergenic | 45.0% |
| ! | GTGGCCATTAGCTTCAACAA+TGG | + | chr8_3:68512632-68512651 | None:intergenic | 45.0% |
| ATTCTTGTGGGTCACAGTCT+TGG | - | chr8_3:68512674-68512693 | Msa1305180:CDS | 45.0% | |
| TTTCCAGAAAAGGTTGCCGT+TGG | - | chr8_3:68512728-68512747 | Msa1305180:CDS | 45.0% | |
| ! | GTGTTTCTGAGTATTCACGG+TGG | + | chr8_3:68513091-68513110 | None:intergenic | 45.0% |
| ATAACCTGACCCTAGAGACA+TGG | - | chr8_3:68513550-68513569 | Msa1305180:intron | 45.0% | |
| !! | AAAACCATGTCTCTAGGGTC+AGG | + | chr8_3:68513557-68513576 | None:intergenic | 45.0% |
| !! | AGCATTTTTGTCGGTGGGTT+AGG | - | chr8_3:68513865-68513884 | Msa1305180:intron | 45.0% |
| TGATGCCTAAAGGTGAACTG+TGG | + | chr8_3:68514085-68514104 | None:intergenic | 45.0% | |
| !! | GTATATTGAGAGTACCCCGA+CGG | - | chr8_3:68515062-68515081 | Msa1305180:intron | 45.0% |
| CCAAGACTTTATTGAGGCCA+GGG | - | chr8_3:68515350-68515369 | Msa1305180:CDS | 45.0% | |
| CACTGGATGATCCAAAATGC+TGG | - | chr8_3:68515490-68515509 | Msa1305180:CDS | 45.0% | |
| GATCAAAGGGGCAGATCATA+TGG | - | chr8_3:68515531-68515550 | Msa1305180:CDS | 45.0% | |
| !!! | AAATTATTCTTTAAAAAAAT+CGG | + | chr8_3:68513756-68513775 | None:intergenic | 5.0% |
| !!! | TAAATTTTGTTATAAAAAAA+TGG | + | chr8_3:68514467-68514486 | None:intergenic | 5.0% |
| CTTGTACATGGTGCTTGCCA+TGG | - | chr8_3:68512473-68512492 | Msa1305180:three_prime_UTR | 50.0% | |
| TGTACCAACTCCAAGCACCA+TGG | + | chr8_3:68512493-68512512 | None:intergenic | 50.0% | |
| !! | TGGTGCTTGGAGTTGGTACA+AGG | - | chr8_3:68512493-68512512 | Msa1305180:three_prime_UTR | 50.0% |
| ! | ACACCAACGGCAACCTTTTC+TGG | + | chr8_3:68512734-68512753 | None:intergenic | 50.0% |
| !! | TGTAGGTGGATTCTAGGGTG+AGG | - | chr8_3:68512937-68512956 | Msa1305180:intron | 50.0% |
| !! | GTAGGTGGATTCTAGGGTGA+GGG | - | chr8_3:68512938-68512957 | Msa1305180:intron | 50.0% |
| GGCTCTATTAAGTCCCTCAC+CGG | - | chr8_3:68512959-68512978 | Msa1305180:CDS | 50.0% | |
| TCTATTAAGTCCCTCACCGG+TGG | - | chr8_3:68512962-68512981 | Msa1305180:CDS | 50.0% | |
| !! | GGTTAAGTTGAGTGGTCCAC+CGG | + | chr8_3:68512981-68513000 | None:intergenic | 50.0% |
| GCCTCTTAATAGTGCTCCAC+CGG | - | chr8_3:68513657-68513676 | Msa1305180:intron | 50.0% | |
| ! | ACCGGTGGAGCACTATTAAG+AGG | + | chr8_3:68513661-68513680 | None:intergenic | 50.0% |
| TTAATAGTGCTCCACCGGTG+AGG | - | chr8_3:68513662-68513681 | Msa1305180:intron | 50.0% | |
| TAATAGTGCTCCACCGGTGA+GGG | - | chr8_3:68513663-68513682 | Msa1305180:intron | 50.0% | |
| GGTCCAATTAAGTCCCTCAC+CGG | + | chr8_3:68513679-68513698 | None:intergenic | 50.0% | |
| ! | ATTGGTGGAGTCTAGGGTGA+GGG | + | chr8_3:68513700-68513719 | None:intergenic | 50.0% |
| ! | AATTGGTGGAGTCTAGGGTG+AGG | + | chr8_3:68513701-68513720 | None:intergenic | 50.0% |
| GGAGAAACACATCTCCTGCA+AGG | - | chr8_3:68514717-68514736 | Msa1305180:intron | 50.0% | |
| GACACTGAATTCTGCCAGTG+TGG | - | chr8_3:68515096-68515115 | Msa1305180:intron | 50.0% | |
| CTATCAACACTCCTCCACTG+AGG | - | chr8_3:68515167-68515186 | Msa1305180:intron | 50.0% | |
| ACGTGTAGTTACCTCAGTGG+AGG | + | chr8_3:68515181-68515200 | None:intergenic | 50.0% | |
| GCCAAGACTTTATTGAGGCC+AGG | - | chr8_3:68515349-68515368 | Msa1305180:CDS | 50.0% | |
| CCCTGGCCTCAATAAAGTCT+TGG | + | chr8_3:68515353-68515372 | None:intergenic | 50.0% | |
| TCTTCCATAAAGAGGGACCC+TGG | + | chr8_3:68515370-68515389 | None:intergenic | 50.0% | |
| ATGGTGCTTGCCATGGTGCT+TGG | - | chr8_3:68512480-68512499 | Msa1305180:three_prime_UTR | 55.0% | |
| CTTGCCATGGTGCTTGGAGT+TGG | - | chr8_3:68512486-68512505 | Msa1305180:three_prime_UTR | 55.0% | |
| CTTGTGGGTCACAGTCTTGG+AGG | - | chr8_3:68512677-68512696 | Msa1305180:CDS | 55.0% | |
| CACGGTGGAGAGAGTGAGAT+TGG | + | chr8_3:68513076-68513095 | None:intergenic | 55.0% | |
| CCAATTAAGTCCCTCACCGG+TGG | + | chr8_3:68513676-68513695 | None:intergenic | 55.0% | |
| CCACCGGTGAGGGACTTAAT+TGG | - | chr8_3:68513673-68513692 | Msa1305180:intron | 55.0% | |
| TGTCCAACCATTCAGCCGTC+GGG | + | chr8_3:68515080-68515099 | None:intergenic | 55.0% | |
| GTGTCCAACCATTCAGCCGT+CGG | + | chr8_3:68515081-68515100 | None:intergenic | 55.0% | |
| GTTGAGTGGTCCACCGGTGA+GGG | + | chr8_3:68512975-68512994 | None:intergenic | 60.0% | |
| AGTTGAGTGGTCCACCGGTG+AGG | + | chr8_3:68512976-68512995 | None:intergenic | 60.0% | |
| ! | AGAGTACCCCGACGGCTGAA+TGG | - | chr8_3:68515070-68515089 | Msa1305180:intron | 60.0% |
| TACCCCGACGGCTGAATGGT+TGG | - | chr8_3:68515074-68515093 | Msa1305180:intron | 60.0% | |
| GTCCAACCATTCAGCCGTCG+GGG | + | chr8_3:68515079-68515098 | None:intergenic | 60.0% | |
| GAGGCCAGGGTCCCTCTTTA+TGG | - | chr8_3:68515363-68515382 | Msa1305180:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 68512390 | 68515754 | 68512390 | ID=Msa1305180;Name=Msa1305180 |
| chr8_3 | mRNA | 68512390 | 68515754 | 68512390 | ID=Msa1305180-mRNA-1;Parent=Msa1305180;Name=Msa1305180-mRNA-1;_AED=0.10;_eAED=0.10;_QI=44|1|1|1|1|1|3|136|261 |
| chr8_3 | exon | 68512390 | 68512807 | 68512390 | ID=Msa1305180-mRNA-1:exon:21211;Parent=Msa1305180-mRNA-1 |
| chr8_3 | exon | 68512956 | 68513081 | 68512956 | ID=Msa1305180-mRNA-1:exon:21210;Parent=Msa1305180-mRNA-1 |
| chr8_3 | exon | 68515333 | 68515754 | 68515333 | ID=Msa1305180-mRNA-1:exon:21209;Parent=Msa1305180-mRNA-1 |
| chr8_3 | five_prime_UTR | 68515711 | 68515754 | 68515711 | ID=Msa1305180-mRNA-1:five_prime_utr;Parent=Msa1305180-mRNA-1 |
| chr8_3 | CDS | 68515333 | 68515710 | 68515333 | ID=Msa1305180-mRNA-1:cds;Parent=Msa1305180-mRNA-1 |
| chr8_3 | CDS | 68512956 | 68513081 | 68512956 | ID=Msa1305180-mRNA-1:cds;Parent=Msa1305180-mRNA-1 |
| chr8_3 | CDS | 68512526 | 68512807 | 68512526 | ID=Msa1305180-mRNA-1:cds;Parent=Msa1305180-mRNA-1 |
| chr8_3 | three_prime_UTR | 68512390 | 68512525 | 68512390 | ID=Msa1305180-mRNA-1:three_prime_utr;Parent=Msa1305180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
