AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1155140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155140 MtrunA17_Chr7g0246701 96.082 638 25 0 1 638 1 638 0.0 1294
Msa1155140 MtrunA17_Chr8g0350391 75.039 633 154 4 4 633 7 638 0.0 1010
Msa1155140 MtrunA17_Chr6g0472571 63.708 631 214 6 7 633 15 634 0.0 852
Msa1155140 MtrunA17_Chr1g0203741 62.857 630 218 7 1 626 1 618 0.0 833
Msa1155140 MtrunA17_Chr8g0388881 59.200 625 232 6 18 634 20 629 0.0 775
Msa1155140 MtrunA17_Chr4g0055031 56.501 623 244 7 10 627 5 605 0.0 739
Msa1155140 MtrunA17_Chr8g0361791 55.263 608 245 6 23 626 17 601 0.0 714
Msa1155140 MtrunA17_Chr5g0416991 53.734 616 254 7 18 627 11 601 0.0 688
Msa1155140 MtrunA17_Chr3g0092501 52.090 622 262 7 10 627 10 599 0.0 663
Msa1155140 MtrunA17_Chr7g0214551 51.887 530 249 3 95 619 37 565 0.0 611
Msa1155140 MtrunA17_Chr8g0369481 50.189 528 249 10 102 625 71 588 1.16e-179 522
Msa1155140 MtrunA17_Chr5g0409411 44.778 632 298 17 12 636 11 598 2.66e-171 501
Msa1155140 MtrunA17_Chr8g0350351 44.465 542 271 10 93 626 82 601 3.64e-167 491
Msa1155140 MtrunA17_Chr7g0246681 46.981 530 253 9 104 625 78 587 1.61e-166 488
Msa1155140 MtrunA17_Chr1g0183721 41.783 572 295 12 69 625 37 585 6.07e-155 459
Msa1155140 MtrunA17_Chr3g0112341 44.486 535 268 13 103 627 155 670 7.78e-152 454
Msa1155140 MtrunA17_Chr1g0167381 44.961 516 256 10 102 605 93 592 1.02e-149 447
Msa1155140 MtrunA17_Chr1g0187601 44.961 516 256 10 102 605 92 591 2.30e-146 438
Msa1155140 MtrunA17_Chr5g0435751 38.804 652 294 20 25 622 17 617 2.66e-143 430
Msa1155140 MtrunA17_Chr1g0159741 42.481 532 275 14 105 624 146 658 5.71e-140 422
Msa1155140 MtrunA17_Chr3g0130381 39.733 599 312 21 56 631 210 782 4.31e-132 406
Msa1155140 MtrunA17_Chr1g0171781 35.981 617 342 13 27 626 24 604 9.92e-129 392
Msa1155140 MtrunA17_Chr5g0437501 35.918 632 338 22 21 625 14 605 6.64e-127 387
Msa1155140 MtrunA17_Chr8g0384431 39.279 555 295 18 69 602 254 787 1.33e-126 393
Msa1155140 MtrunA17_Chr3g0113981 39.474 532 277 15 110 630 175 672 2.02e-126 388
Msa1155140 MtrunA17_Chr3g0125511 40.111 541 282 18 109 631 232 748 4.43e-125 387
Msa1155140 MtrunA17_Chr8g0372471 39.299 542 280 17 103 625 379 890 8.12e-121 380
Msa1155140 MtrunA17_Chr1g0155141 34.848 528 293 16 111 625 210 699 4.75e-93 302
Msa1155140 MtrunA17_Chr3g0115931 30.435 644 365 20 20 625 90 688 1.52e-89 292
Msa1155140 MtrunA17_Chr5g0426281 29.937 638 366 22 20 625 82 670 3.86e-88 288
Msa1155140 MtrunA17_Chr5g0404771 47.257 237 104 6 103 327 321 548 3.82e-67 229
Msa1155140 MtrunA17_Chr4g0043121 29.691 421 258 12 1 411 5 397 4.58e-53 188
Msa1155140 MtrunA17_Chr5g0404761 33.566 286 160 11 353 625 4 272 1.04e-45 163
Msa1155140 MtrunA17_Chr4g0043131 43.151 146 77 4 482 624 40 182 9.83e-34 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155140 AT2G45750.1 68.489 622 182 4 18 635 14 625 0.0 918
Msa1155140 AT4G00750.1 68.297 634 183 6 4 633 11 630 0.0 918
Msa1155140 AT4G10440.1 60.434 599 229 3 29 627 28 618 0.0 779
Msa1155140 AT1G33170.1 57.803 628 240 5 19 628 17 637 0.0 776
Msa1155140 AT1G26850.2 56.743 608 243 5 22 626 19 609 0.0 726
Msa1155140 AT1G26850.1 56.743 608 243 5 22 626 19 609 0.0 726
Msa1155140 AT4G18030.1 56.260 615 248 8 14 627 11 605 0.0 706
Msa1155140 AT2G43200.2 52.115 520 243 4 102 620 92 606 0.0 582
Msa1155140 AT2G43200.1 52.115 520 243 4 102 620 92 606 0.0 582
Msa1155140 AT1G26850.3 54.183 502 210 5 22 520 19 503 0.0 563
Msa1155140 AT1G31850.1 45.981 622 298 13 10 625 7 596 0.0 538
Msa1155140 AT1G31850.2 45.981 622 298 13 10 625 7 596 0.0 538
Msa1155140 AT1G31850.4 45.981 622 298 13 10 625 7 596 0.0 538
Msa1155140 AT1G31850.3 45.981 622 298 13 10 625 7 596 0.0 538
Msa1155140 AT4G19120.1 48.099 526 261 9 104 625 73 590 1.71e-176 514
Msa1155140 AT4G19120.2 48.099 526 261 9 104 625 73 590 1.71e-176 514
Msa1155140 AT4G00740.1 46.069 547 261 13 93 628 73 596 2.38e-167 491
Msa1155140 AT4G00740.2 46.069 547 261 13 93 628 73 596 2.38e-167 491
Msa1155140 AT1G04430.1 44.090 533 270 10 81 601 64 580 4.63e-151 450
Msa1155140 AT1G04430.3 44.090 533 270 10 81 601 64 580 4.63e-151 450
Msa1155140 AT1G04430.2 44.090 533 270 10 81 601 64 580 4.63e-151 450
Msa1155140 AT2G39750.1 42.491 546 283 13 93 627 169 694 3.77e-149 448
Msa1155140 AT4G19120.3 49.309 434 209 8 104 533 73 499 1.09e-146 435
Msa1155140 AT4G14360.1 44.727 512 255 10 102 601 77 572 1.56e-146 438
Msa1155140 AT4G14360.2 44.727 512 255 10 102 601 77 572 1.56e-146 438
Msa1155140 AT3G23300.2 42.435 542 282 11 102 629 80 605 1.34e-145 436
Msa1155140 AT3G23300.1 42.435 542 282 11 102 629 80 605 1.34e-145 436
Msa1155140 AT5G06050.1 41.712 549 285 15 90 624 136 663 9.36e-145 436
Msa1155140 AT5G14430.1 41.573 623 314 18 25 628 16 607 1.02e-144 434
Msa1155140 AT1G77260.1 42.726 543 278 14 92 623 134 654 9.22e-143 430
Msa1155140 AT5G14430.2 41.252 623 316 18 25 628 16 607 1.04e-142 429
Msa1155140 AT5G04060.1 39.599 548 290 12 92 626 79 598 4.12e-132 401
Msa1155140 AT3G10200.1 40.000 540 284 14 103 626 74 589 9.49e-131 397
Msa1155140 AT2G40280.1 40.782 537 264 17 110 631 90 587 5.62e-130 395
Msa1155140 AT1G29470.1 36.817 622 341 19 37 634 173 766 9.81e-129 397
Msa1155140 AT1G29470.2 36.817 622 341 19 37 634 173 766 9.81e-129 397
Msa1155140 AT3G56080.1 41.021 529 265 16 110 625 114 608 2.34e-128 392
Msa1155140 AT2G34300.2 40.516 543 282 15 110 637 250 766 4.71e-128 396
Msa1155140 AT2G34300.3 40.516 543 282 15 110 637 250 766 4.71e-128 396
Msa1155140 AT2G34300.1 40.516 543 282 15 110 637 250 766 4.71e-128 396
Msa1155140 AT5G64030.1 39.292 537 277 16 110 625 308 816 1.75e-125 391
Msa1155140 AT3G51070.1 40.367 545 277 19 109 634 380 895 2.98e-125 392
Msa1155140 AT3G10200.2 39.560 546 278 15 103 620 74 595 1.55e-122 376
Msa1155140 AT3G56080.2 42.549 463 227 15 110 559 114 550 2.28e-114 353
Msa1155140 AT3G51070.2 41.239 468 238 16 109 559 380 827 2.04e-107 343
Msa1155140 AT1G19430.1 35.606 528 290 16 111 625 232 722 5.04e-95 308
Msa1155140 AT1G19430.3 35.606 528 290 16 111 625 232 722 5.04e-95 308
Msa1155140 AT1G13860.4 33.333 549 302 15 97 614 77 592 6.99e-91 294
Msa1155140 AT1G13860.3 33.333 549 302 15 97 614 77 592 6.99e-91 294
Msa1155140 AT1G13860.1 33.333 549 302 15 97 614 77 592 6.99e-91 294
Msa1155140 AT1G13860.5 33.333 549 302 15 97 614 77 592 6.99e-91 294
Msa1155140 AT1G78240.1 34.054 555 307 17 104 624 149 678 6.44e-90 293
Msa1155140 AT1G78240.2 34.054 555 307 17 104 624 149 678 6.44e-90 293
Msa1155140 AT2G03480.2 32.616 558 303 15 95 624 80 592 6.94e-88 286
Msa1155140 AT2G03480.1 32.258 558 316 16 95 624 80 603 2.40e-84 276
Msa1155140 AT1G13860.2 34.649 456 248 13 187 614 3 436 1.26e-79 259
Msa1155140 AT1G19430.2 33.333 396 220 13 111 494 232 595 6.60e-54 194
Msa1155140 AT2G03480.3 30.581 327 208 6 95 411 80 397 2.36e-46 170

Find 209 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAACCACCCACATAAAT+TGG 0.106464 7_4:+42976966 None:intergenic
CTTCAAAATGAATCCAATTC+TGG 0.198685 7_4:+42981065 None:intergenic
TATCAGGGCCACCAATAAAT+TGG 0.228314 7_4:-42979296 Msa1155140:CDS
CAATGGCTCTCCCAATTTAT+TGG 0.228514 7_4:+42979285 None:intergenic
TTCGGACGGACCCATCTTTA+AGG 0.233056 7_4:+42980957 None:intergenic
CTCTCGTTGCCTAATTCCTT+GGG 0.238832 7_4:-42979487 Msa1155140:CDS
CATTCTGGCCCCAAGGAATT+AGG 0.252109 7_4:+42979478 None:intergenic
GTCACACGCGCTGCGGATTC+TGG 0.263634 7_4:+42981334 None:intergenic
AGGATATATATTTACCATTC+TGG 0.284989 7_4:+42979463 None:intergenic
AAGGATTAGCAGTGGAAGTT+TGG 0.319848 7_4:-42978422 Msa1155140:CDS
TGTCAAACATGTATCCATTT+TGG 0.323300 7_4:+42978528 None:intergenic
GGAGGGTATTGGATTCTATC+AGG 0.324275 7_4:-42979312 Msa1155140:CDS
GGTGACCGGTTCAGGTTTCC+TGG 0.324820 7_4:-42981043 Msa1155140:CDS
GCTCTCGTTGCCTAATTCCT+TGG 0.326895 7_4:-42979488 Msa1155140:CDS
AATTAATCAGGTTGCAAGTT+GGG 0.358924 7_4:-42979676 Msa1155140:intron
GCTGCGGATTCTGGTGGGTC+GGG 0.359022 7_4:+42981343 None:intergenic
ACAATATTCATGACCCAAAC+TGG 0.359706 7_4:+42978235 None:intergenic
GATGGCGGCGGAGGTGGTGG+TGG 0.359751 7_4:+42981480 None:intergenic
TTGCAATGAATATGATTAGT+AGG 0.361054 7_4:+42979141 None:intergenic
AAAGAATTAGCCATTGTTGT+TGG 0.377603 7_4:+42981616 None:intergenic
GCCGGAGATGGCGGCGGAGG+TGG 0.380019 7_4:+42981474 None:intergenic
CAATGATTGATGATCCAGTT+TGG 0.380101 7_4:-42978249 Msa1155140:CDS
AGTCTTGAGAGAGGTTTGTT+GGG 0.382054 7_4:+42981571 None:intergenic
GAGTCTTGAGAGAGGTTTGT+TGG 0.382542 7_4:+42981570 None:intergenic
AAATTAGTTTGTGGGCAATC+AGG 0.386232 7_4:+42981421 None:intergenic
GGCGGCGGAGGTGGTGGTGG+AGG 0.387506 7_4:+42981483 None:intergenic
ACCGCTTTAGACACCGGTTG+TGG 0.389827 7_4:-42980935 Msa1155140:CDS
CGAGGAGTTCCAGCTTTGAT+TGG 0.389949 7_4:-42979567 Msa1155140:CDS
GGTGGCCTGAGAGCCGTGAT+TGG 0.392694 7_4:-42981138 Msa1155140:CDS
CGGAGAGAAAGAGAAAGAAA+AGG 0.393918 7_4:+42981649 None:intergenic
GCCATGTCAAAGGCTCTAGA+AGG 0.396534 7_4:+42979516 None:intergenic
TTGGGTCATGAATATTGTTC+CGG 0.398019 7_4:-42978230 Msa1155140:CDS
ACTTGATATGAATGCTTACA+TGG 0.416586 7_4:-42978287 Msa1155140:CDS
CGGTTCAGGTTTCCTGGTGG+TGG 0.418362 7_4:-42981037 Msa1155140:CDS
GGAGATGGCGGCGGAGGTGG+TGG 0.420969 7_4:+42981477 None:intergenic
GGAACTGATGTTAGTCTCTC+AGG 0.432324 7_4:+42978448 None:intergenic
GCAAACCACCCACATAAATT+GGG 0.432883 7_4:+42976967 None:intergenic
AAACTCATCAACCTTAAAGA+TGG 0.440201 7_4:-42980968 Msa1155140:CDS
CAATAAATTGGGAGAGCCAT+TGG 0.441065 7_4:-42979284 Msa1155140:CDS
AGGATCCTTTGCATCACAAA+AGG 0.443703 7_4:+42979089 None:intergenic
TGTTAGTCTCTCAGGCCAAT+TGG 0.447407 7_4:+42978456 None:intergenic
TCAATCGTCAATTCTTTATG+TGG 0.449181 7_4:+42981097 None:intergenic
CGCTGCGGATTCTGGTGGGT+CGG 0.450044 7_4:+42981342 None:intergenic
GTGGCCTGAGAGCCGTGATT+GGG 0.452100 7_4:-42981137 Msa1155140:CDS
TAGAATTACAGACCATGAAA+AGG 0.453338 7_4:-42977172 Msa1155140:CDS
GTATATTACCATGCTGAGTC+AGG 0.460310 7_4:+42979069 None:intergenic
GGAGAGAAAGAGAAAGAAAA+GGG 0.460567 7_4:+42981650 None:intergenic
TGATTATCAGCTAGCAGAGC+CGG 0.461365 7_4:-42978326 Msa1155140:CDS
CATTCATATCAAGTAAATTA+CGG 0.462099 7_4:+42978296 None:intergenic
TGCTACGTCCTGGAGGGTAT+TGG 0.462923 7_4:-42979323 Msa1155140:CDS
ACATTCTTCTTGAGATGGAT+AGG 0.463381 7_4:-42977287 Msa1155140:CDS
AGAAGGGTGACATTGCAATA+TGG 0.465380 7_4:-42979170 Msa1155140:CDS
TTGGTGTTATTGCCTCAATT+AGG 0.466240 7_4:-42979548 Msa1155140:CDS
ATCAGCATGTATAAAGTCAT+AGG 0.466475 7_4:+42977468 None:intergenic
CTGAGAGCCGTGATTGGGCT+TGG 0.467893 7_4:-42981132 Msa1155140:CDS
ATCAGGGCCACCAATAAATT+GGG 0.468994 7_4:-42979295 Msa1155140:CDS
GGTGGAGTGGTGATTGTTGC+CGG 0.469902 7_4:+42981456 None:intergenic
CATGAATATTGTTCCGGTCC+AGG 0.471627 7_4:-42978224 Msa1155140:CDS
ACCACCTCCGCCGCCATCTC+CGG 0.471918 7_4:-42981475 Msa1155140:CDS
GTGGTGGAGGATTATCCAAT+TGG 0.473772 7_4:-42978471 Msa1155140:CDS
TCAAAGAAAATACCGAGTTA+TGG 0.474678 7_4:-42978378 Msa1155140:CDS
TCCAACCCAATTTATGTGGG+TGG 0.475080 7_4:-42976972 Msa1155140:three_prime_UTR
GGTGCGTACATTGATGATAT+CGG 0.477671 7_4:-42980992 Msa1155140:CDS
GATTCTCCGGTGTCGGATAC+CGG 0.478052 7_4:-42981188 Msa1155140:CDS
GATTATCAGCTAGCAGAGCC+GGG 0.479427 7_4:-42978325 Msa1155140:CDS
GTGGTGATTGTTGCCGGAGA+TGG 0.482734 7_4:+42981462 None:intergenic
GCCATTGGAAAGGGTGGGAG+AGG 0.486448 7_4:-42979269 Msa1155140:CDS
AGAGAGAGGAAGGAAGAAAG+AGG 0.487287 7_4:+42981784 None:intergenic
TGATCGGAACATATCAGAAC+TGG 0.488249 7_4:-42978162 Msa1155140:intron
GTTGCCGGAGATGGCGGCGG+AGG 0.488922 7_4:+42981471 None:intergenic
GTTTATGAACGCGGATTGAT+CGG 0.489841 7_4:-42978178 Msa1155140:CDS
CAAGCCCAATCACGGCTCTC+AGG 0.490524 7_4:+42981133 None:intergenic
TTGTAGCAGTCAAGCAGTAT+TGG 0.492709 7_4:-42977125 Msa1155140:CDS
TGGCTCTCCCAATTTATTGG+TGG 0.493582 7_4:+42979288 None:intergenic
GGTATGCGACATCGGTTTAT+CGG 0.497056 7_4:-42981302 Msa1155140:CDS
TGAGCTTCATGTGTATCTCT+TGG 0.497157 7_4:+42979609 None:intergenic
CACCACCAGGAAACCTGAAC+CGG 0.497526 7_4:+42981038 None:intergenic
CTGCGGATTCTGGTGGGTCG+GGG 0.498213 7_4:+42981344 None:intergenic
GAGAGAGGAAGGAAGAAAGA+GGG 0.498492 7_4:+42981785 None:intergenic
GTGGAGGTGAAATTAGTTTG+TGG 0.499075 7_4:+42981412 None:intergenic
CCGCTTTAGACACCGGTTGT+GGG 0.499535 7_4:-42980934 Msa1155140:CDS
TCACAAATCTCAAGACCAAA+AGG 0.500926 7_4:+42977051 None:intergenic
AATGATTGATGATCCAGTTT+GGG 0.502411 7_4:-42978248 Msa1155140:CDS
ATAAAAGAAGTTAGTGGTGG+AGG 0.502506 7_4:-42978484 Msa1155140:CDS
GAGACACTGTCCGGAGAAAG+AGG 0.505810 7_4:-42981212 Msa1155140:CDS
TTACATAATTCATCAAGTAA+AGG 0.506141 7_4:+42976802 None:intergenic
AGCGGTCGTTGAAATTTCCT+CGG 0.506218 7_4:-42981255 Msa1155140:CDS
GTTGATAGAGTGCTACGTCC+TGG 0.506357 7_4:-42979333 Msa1155140:CDS
CAATTTACCTGTCCTCATAG+AGG 0.506394 7_4:+42977434 None:intergenic
CTAATTCCTTGGGGCCAGAA+TGG 0.507755 7_4:-42979477 Msa1155140:intron
GTCATAGGTTCGAGGATAAG+TGG 0.507789 7_4:+42977483 None:intergenic
ACCATGTTTCCACGTGGCGC+TGG 0.508694 7_4:-42981013 Msa1155140:CDS
CGGAGAATCTCCTCTTTCTC+CGG 0.508889 7_4:+42981202 None:intergenic
GGCGGAACGCGGTAGCCATA+TGG 0.508936 7_4:+42981163 None:intergenic
GAATTAATCAGGTTGCAAGT+TGG 0.509111 7_4:-42979677 Msa1155140:intron
ATTAGCAGTGGAAGTTTGGA+TGG 0.509258 7_4:-42978418 Msa1155140:CDS
GAGGGTTTAGCTTGGACTGA+GGG 0.513669 7_4:+42981803 None:intergenic
TCCTCTCCCACCCTTTCCAA+TGG 0.515898 7_4:+42979268 None:intergenic
TGGGCAATCAGGGCGGATGA+TGG 0.516410 7_4:+42981432 None:intergenic
AGAGGACATTCTTCTTGAGA+TGG 0.516456 7_4:-42977292 Msa1155140:CDS
AGAAAGTAGAGTCTTGAGAG+AGG 0.518829 7_4:+42981562 None:intergenic
ATGTCAGATACCTCAGGAAG+TGG 0.522438 7_4:+42978505 None:intergenic
AGAATTACAGACCATGAAAA+GGG 0.524571 7_4:-42977171 Msa1155140:CDS
CCCTTCTAGAGCCTTTGACA+TGG 0.525416 7_4:-42979517 Msa1155140:CDS
TGGAGGTGAAATTAGTTTGT+GGG 0.527107 7_4:+42981413 None:intergenic
TTGTTGTTGGATAAAGAAAA+CGG 0.527945 7_4:+42981629 None:intergenic
GGTTCAGGTTTCCTGGTGGT+GGG 0.530907 7_4:-42981036 Msa1155140:CDS
AAACTTCCACTGCTAATCCT+TGG 0.531039 7_4:+42978424 None:intergenic
AGTGATGGAAGAAGTGGTGG+TGG 0.532008 7_4:+42981393 None:intergenic
GATGGAAGAAGTGGTGGTGG+AGG 0.532285 7_4:+42981396 None:intergenic
ATTGGGAGAGCCATTGGAAA+GGG 0.532321 7_4:-42979278 Msa1155140:CDS
AACTCATCAACCTTAAAGAT+GGG 0.532726 7_4:-42980967 Msa1155140:CDS
TGATGTGGATGTGTTGTTGA+AGG 0.534088 7_4:-42977229 Msa1155140:CDS
CGCTTTAGACACCGGTTGTG+GGG 0.535671 7_4:-42980933 Msa1155140:intron
TCTGACATAAAAGAAGTTAG+TGG 0.535713 7_4:-42978490 Msa1155140:CDS
AATTAGTTTGTGGGCAATCA+GGG 0.536410 7_4:+42981422 None:intergenic
GCGGTCGTTGAAATTTCCTC+GGG 0.540278 7_4:-42981254 Msa1155140:CDS
ATCAGGGCGGATGATGGTGG+TGG 0.540450 7_4:+42981438 None:intergenic
GGCGGATGATGGTGGTGGAG+TGG 0.540502 7_4:+42981443 None:intergenic
CGGAGAAAGAGGAGATTCTC+CGG 0.542225 7_4:-42981201 Msa1155140:CDS
TGTGATATTGCGTGATGATG+TGG 0.543342 7_4:-42977244 Msa1155140:CDS
GCAATCAGGGCGGATGATGG+TGG 0.544035 7_4:+42981435 None:intergenic
ATTAATCAGGTTGCAAGTTG+GGG 0.545923 7_4:-42979675 Msa1155140:intron
GTCCGAACCGCTTTAGACAC+CGG 0.546098 7_4:-42980941 Msa1155140:CDS
ACCACCCACATAAATTGGGT+TGG 0.546854 7_4:+42976971 None:intergenic
CTTCCACTGCTAATCCTTGG+TGG 0.547020 7_4:+42978427 None:intergenic
TCAAAGGCTCTAGAAGGGTA+AGG 0.547116 7_4:+42979522 None:intergenic
AACCGGTGTCTAAAGCGGTT+CGG 0.547844 7_4:+42980939 None:intergenic
GTGTTGATCTCAGCCTGGAC+CGG 0.550617 7_4:+42978211 None:intergenic
ATTGTTGCCGGAGATGGCGG+CGG 0.550902 7_4:+42981468 None:intergenic
GCAATAACACCAATCAAAGC+TGG 0.551247 7_4:+42979558 None:intergenic
ACCAGCGCCACGTGGAAACA+TGG 0.553389 7_4:+42981012 None:intergenic
ACACGCGCTGCGGATTCTGG+TGG 0.554767 7_4:+42981337 None:intergenic
AATTTACCTGTCCTCATAGA+GGG 0.556718 7_4:+42977435 None:intergenic
GGAAACATGGTCCCACCACC+AGG 0.557115 7_4:+42981025 None:intergenic
GGAAGAAAGAGGGTTTAGCT+TGG 0.557631 7_4:+42981795 None:intergenic
GTGTGACAGATGTAATATAG+AGG 0.560024 7_4:-42977310 Msa1155140:intron
ATCAAGAGTGATGGAAGAAG+TGG 0.562278 7_4:+42981387 None:intergenic
TCATTGCAAAATAACAAGAA+AGG 0.562481 7_4:-42979127 Msa1155140:CDS
TGTCGGATACCGGCACCATA+TGG 0.563020 7_4:-42981178 Msa1155140:CDS
CGCGTTAGTCACACGCGCTG+CGG 0.563602 7_4:+42981327 None:intergenic
CACGCGCTGCGGATTCTGGT+GGG 0.563714 7_4:+42981338 None:intergenic
TTATCGTGAGAGACACTGTC+CGG 0.564748 7_4:-42981221 Msa1155140:CDS
GAGAAAGAGAAAGAAAAGGG+TGG 0.565117 7_4:+42981653 None:intergenic
GGATCCTTTGCATCACAAAA+GGG 0.566364 7_4:+42979090 None:intergenic
CAGGCCACCTCGGCGGAACG+CGG 0.566737 7_4:+42981152 None:intergenic
ATTTGCAGATGCAATGCAAT+GGG 0.567404 7_4:-42977199 Msa1155140:CDS
GATAAACCGATGTCGCATAC+CGG 0.568016 7_4:+42981304 None:intergenic
CGCAATATCACACTTCCTTG+TGG 0.568412 7_4:+42977255 None:intergenic
GGGAGAGCCATTGGAAAGGG+TGG 0.572041 7_4:-42979275 Msa1155140:CDS
CTTGATATGAATGCTTACAT+GGG 0.587393 7_4:-42978286 Msa1155140:CDS
GATTTGCAGATGCAATGCAA+TGG 0.589141 7_4:-42977200 Msa1155140:CDS
CAGGCTGAGATCAACACACT+TGG 0.589859 7_4:-42978205 Msa1155140:CDS
GATAGAATCCAATACCCTCC+AGG 0.591531 7_4:+42979315 None:intergenic
GATATGAATGCTTACATGGG+AGG 0.592658 7_4:-42978283 Msa1155140:CDS
GACCGCTGCACGTCCTCACA+CGG 0.592771 7_4:+42981271 None:intergenic
TATTTACCATTCTGGCCCCA+AGG 0.593811 7_4:+42979471 None:intergenic
AACTCTCTTCTTCCATAACT+CGG 0.594085 7_4:+42978366 None:intergenic
AAGAGGAGATTCTCCGGTGT+CGG 0.594261 7_4:-42981195 Msa1155140:CDS
GACATAAAAGAAGTTAGTGG+TGG 0.594804 7_4:-42978487 Msa1155140:CDS
TCACGGCTCTCAGGCCACCT+CGG 0.595773 7_4:+42981142 None:intergenic
AACGCGCCGGTATGCGACAT+CGG 0.598426 7_4:-42981310 Msa1155140:CDS
CAAAGGATCCTGACTCAGCA+TGG 0.601524 7_4:-42979077 Msa1155140:intron
GAGGGTATTGGATTCTATCA+GGG 0.605036 7_4:-42979311 Msa1155140:CDS
CAAGTGTGTTGATCTCAGCC+TGG 0.607724 7_4:+42978206 None:intergenic
ACGCGGTAGCCATATGGTGC+CGG 0.608965 7_4:+42981169 None:intergenic
AGAGGGTTTAGCTTGGACTG+AGG 0.609769 7_4:+42981802 None:intergenic
AGCGCGTGTGACTAACGCGC+CGG 0.610056 7_4:-42981323 Msa1155140:CDS
AATTGGGAGAGCCATTGGAA+AGG 0.610487 7_4:-42979279 Msa1155140:CDS
AGTAAATTACGGTATCTCCC+CGG 0.611082 7_4:+42978307 None:intergenic
CATGAAACAAGTAACGTCCA+TGG 0.615898 7_4:-42981703 Msa1155140:five_prime_UTR
TAGCATACCAAGCCCAATCA+CGG 0.616099 7_4:+42981125 None:intergenic
ACAGACTTCAATTGAGAGAG+TGG 0.617914 7_4:-42979223 Msa1155140:CDS
GGAGAGCCATTGGAAAGGGT+GGG 0.618351 7_4:-42979274 Msa1155140:CDS
AGAGCAATGAGCCATGTCAA+AGG 0.619085 7_4:+42979506 None:intergenic
GTTCAATTTGCTCTTGAACG+AGG 0.620941 7_4:-42979585 Msa1155140:CDS
ATGTTTGACACCACTTCCTG+AGG 0.623014 7_4:-42978515 Msa1155140:CDS
CTTGGTGTCGTTTATGAACG+CGG 0.623640 7_4:-42978187 Msa1155140:CDS
ATGGTGCCGGTATCCGACAC+CGG 0.623922 7_4:+42981182 None:intergenic
TCTCGTTGCCTAATTCCTTG+GGG 0.627177 7_4:-42979486 Msa1155140:CDS
CTCCGTGTGAGGACGTGCAG+CGG 0.628570 7_4:-42981273 Msa1155140:CDS
GTGATTGTTGCCGGAGATGG+CGG 0.629068 7_4:+42981465 None:intergenic
CCATGTCAAAGGCTCTAGAA+GGG 0.629227 7_4:+42979517 None:intergenic
CGATAAATTAAATTCTCCCG+AGG 0.629535 7_4:+42981238 None:intergenic
AAGAGTGATGGAAGAAGTGG+TGG 0.632236 7_4:+42981390 None:intergenic
CGATCAGCTATATGAAACCA+TGG 0.636044 7_4:+42981686 None:intergenic
TGTATAAAGTCATAGGTTCG+AGG 0.642463 7_4:+42977475 None:intergenic
ATAGAGTGCTACGTCCTGGA+GGG 0.642534 7_4:-42979329 Msa1155140:CDS
AGGGTTTAGCTTGGACTGAG+GGG 0.644551 7_4:+42981804 None:intergenic
CCCACAACCGGTGTCTAAAG+CGG 0.650759 7_4:+42980934 None:intergenic
ATGGCTACCGCGTTCCGCCG+AGG 0.652046 7_4:-42981159 Msa1155140:CDS
GGTGTCTAAAGCGGTTCGGA+CGG 0.653499 7_4:+42980943 None:intergenic
CGGCTCTCAGGCCACCTCGG+CGG 0.655059 7_4:+42981145 None:intergenic
GGTTCGAGGATAAGTGGACA+TGG 0.656711 7_4:+42977489 None:intergenic
CTTGTTTCATGAGAGTGACG+CGG 0.657630 7_4:+42981715 None:intergenic
GTTCCACCAAGGATTAGCAG+TGG 0.659990 7_4:-42978430 Msa1155140:CDS
GATAGAGTGCTACGTCCTGG+AGG 0.664230 7_4:-42979330 Msa1155140:CDS
ATGTACGCACCAGCGCCACG+TGG 0.671011 7_4:+42981004 None:intergenic
GGTGCAGAGGATGATGGTGA+AGG 0.675786 7_4:+42981537 None:intergenic
ATTATCAGCTAGCAGAGCCG+GGG 0.679309 7_4:-42978324 Msa1155140:CDS
ATCGGAGTATACTCCGTGTG+AGG 0.687381 7_4:-42981284 Msa1155140:CDS
GCTACCGCGTTCCGCCGAGG+TGG 0.687926 7_4:-42981156 Msa1155140:CDS
TAGTTTGTGGGCAATCAGGG+CGG 0.688675 7_4:+42981425 None:intergenic
AGGGTAAGGAAGCCTAATTG+AGG 0.690921 7_4:+42979536 None:intergenic
GACACTGCTAATATGTCACG+TGG 0.691648 7_4:+42979639 None:intergenic
GACTAACATCAGTTCCACCA+AGG 0.691717 7_4:-42978441 Msa1155140:CDS
GACCGGTTCAGGTTTCCTGG+TGG 0.693052 7_4:-42981040 Msa1155140:CDS
AGGGTGGGAGAGGACTCGTG+AGG 0.694135 7_4:-42979259 Msa1155140:CDS
GGTGGGACCATGTTTCCACG+TGG 0.790969 7_4:-42981019 Msa1155140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTCAATTAACTTTTTT+AGG - chr7_4:42977908-42977927 Msa1155140:intron 10.0%
!!! TTTATAAATGTATATGATTT+TGG - chr7_4:42978098-42978117 Msa1155140:intron 10.0%
!!! ATGAAAATTGTATATAATTT+TGG - chr7_4:42978135-42978154 Msa1155140:intron 10.0%
!!! ATAAATTATTTTTTTTGGAA+TGG + chr7_4:42979990-42980009 None:intergenic 10.0%
!!! GTTAATTGAAATTTTTCAAT+TGG + chr7_4:42977902-42977921 None:intergenic 15.0%
!! AATTGATATATAGTTAGTTA+AGG - chr7_4:42978449-42978468 Msa1155140:CDS 15.0%
!! ATATTTAAAAGAATAGGAAA+AGG + chr7_4:42979572-42979591 None:intergenic 15.0%
!!! TAATCTATTTATTTGTTAGT+TGG - chr7_4:42979927-42979946 Msa1155140:intron 15.0%
!!! AATTTTCTTTTCTTCATTTT+AGG - chr7_4:42980061-42980080 Msa1155140:intron 15.0%
!!! TATTTACCTTTCTTTAAAAT+TGG + chr7_4:42980519-42980538 None:intergenic 15.0%
!!! TAAATAGTTATTTCTGAATT+TGG + chr7_4:42981222-42981241 None:intergenic 15.0%
!!! TTATAATTTGATTTTCCTTT+TGG - chr7_4:42981550-42981569 Msa1155140:CDS 15.0%
!!! TTGAAATTTTTCAATTGGTT+GGG + chr7_4:42977897-42977916 None:intergenic 20.0%
!!! ATTGAAATTTTTCAATTGGT+TGG + chr7_4:42977898-42977917 None:intergenic 20.0%
!!! TTTTAGGTTGATTTTAGTTT+TGG - chr7_4:42977924-42977943 Msa1155140:intron 20.0%
!! TATAGTTAGTTAAGGTATAT+TGG - chr7_4:42978457-42978476 Msa1155140:CDS 20.0%
!! AAACAATCTTCTTAAATTCT+TGG - chr7_4:42978576-42978595 Msa1155140:intron 20.0%
!! TTGTTACAATTGAATTAATC+AGG - chr7_4:42978928-42978947 Msa1155140:intron 20.0%
!!! TTGTTTTATGTATTTGTAGA+TGG - chr7_4:42979244-42979263 Msa1155140:CDS 20.0%
!! CATTCATATCAAGTAAATTA+CGG + chr7_4:42980323-42980342 None:intergenic 20.0%
!! ACTTTAAATTCAATTATTGG+TGG + chr7_4:42980795-42980814 None:intergenic 20.0%
!! TGCACTTTAAATTCAATTAT+TGG + chr7_4:42980798-42980817 None:intergenic 20.0%
!! TTGTTGTTGGATAAAGAAAA+CGG + chr7_4:42976990-42977009 None:intergenic 25.0%
!! TTTTCTTTATCCAACAACAA+TGG - chr7_4:42976990-42977009 Msa1155140:three_prime_UTR 25.0%
! TTGAGAAAAAAAACCAGAAT+TGG - chr7_4:42977538-42977557 Msa1155140:intron 25.0%
!! TATTTAGAACGTTTGAGAAT+TGG - chr7_4:42977971-42977990 Msa1155140:intron 25.0%
! TCAGAAAAAAAAGTCAAATG+TGG + chr7_4:42978264-42978283 None:intergenic 25.0%
! TATGTTTCAATTTCAAAGCA+TGG + chr7_4:42978408-42978427 None:intergenic 25.0%
! AGAAAAAAGGGTAACATATA+GGG - chr7_4:42978525-42978544 Msa1155140:CDS 25.0%
!!! TGAAGTTATTTTGTTTGTTG+AGG - chr7_4:42978751-42978770 Msa1155140:intron 25.0%
! CATGAAGTAACTTAGAAATA+AGG + chr7_4:42978799-42978818 None:intergenic 25.0%
! AGGATATATATTTACCATTC+TGG + chr7_4:42979156-42979175 None:intergenic 25.0%
! CTTTCAAATTAAAATGTGTC+GGG + chr7_4:42979193-42979212 None:intergenic 25.0%
! GCTTTCAAATTAAAATGTGT+CGG + chr7_4:42979194-42979213 None:intergenic 25.0%
! TTGCAATGAATATGATTAGT+AGG + chr7_4:42979478-42979497 None:intergenic 25.0%
! TCATTGCAAAATAACAAGAA+AGG - chr7_4:42979489-42979508 Msa1155140:CDS 25.0%
! GTCACAATTCAATATCTTAA+AGG + chr7_4:42979604-42979623 None:intergenic 25.0%
! ACAAGTAACTAAAGAGAAAA+GGG + chr7_4:42980028-42980047 None:intergenic 25.0%
! AACAAGTAACTAAAGAGAAA+AGG + chr7_4:42980029-42980048 None:intergenic 25.0%
!!! TTCTTTAAAATTGGTTGGTT+AGG + chr7_4:42980510-42980529 None:intergenic 25.0%
!!! AACCAACCAATTTTAAAGAA+AGG - chr7_4:42980510-42980529 Msa1155140:intron 25.0%
!!! TACCTTTCTTTAAAATTGGT+TGG + chr7_4:42980515-42980534 None:intergenic 25.0%
!! TTTATTAGAGATGCTATTTG+AGG - chr7_4:42980611-42980630 Msa1155140:intron 25.0%
!!! AATTTTAGTGAGCTAAGATT+AGG + chr7_4:42980822-42980841 None:intergenic 25.0%
!! ACTTTATAATTGTGCACTTT+TGG - chr7_4:42980854-42980873 Msa1155140:intron 25.0%
! GATAAAGCTATACTATAAGT+GGG + chr7_4:42980919-42980938 None:intergenic 25.0%
! CTATTGTAAAGGACAAAATT+AGG + chr7_4:42980990-42981009 None:intergenic 25.0%
!! CAATTTTCTGTCTATTGTAA+AGG + chr7_4:42981001-42981020 None:intergenic 25.0%
! TCACAAAGTTATTATATGAG+TGG + chr7_4:42981275-42981294 None:intergenic 25.0%
!!! TTTCTTTGTTGATTTTGTTC+AGG + chr7_4:42981529-42981548 None:intergenic 25.0%
!! TCATGTCAACTTAAATTTTC+AGG - chr7_4:42981607-42981626 Msa1155140:CDS 25.0%
AAAGAATTAGCCATTGTTGT+TGG + chr7_4:42977003-42977022 None:intergenic 30.0%
TCAATCGTCAATTCTTTATG+TGG + chr7_4:42977522-42977541 None:intergenic 30.0%
CTTCAAAATGAATCCAATTC+TGG + chr7_4:42977554-42977573 None:intergenic 30.0%
! CAGAATTGGATTCATTTTGA+AGG - chr7_4:42977552-42977571 Msa1155140:intron 30.0%
AAACTCATCAACCTTAAAGA+TGG - chr7_4:42977648-42977667 Msa1155140:intron 30.0%
AACTCATCAACCTTAAAGAT+GGG - chr7_4:42977649-42977668 Msa1155140:intron 30.0%
TGCATGATAGTAAAAGAAAC+CGG + chr7_4:42977747-42977766 None:intergenic 30.0%
! CATTTTCAATGTCAATGAAC+CGG - chr7_4:42977777-42977796 Msa1155140:intron 30.0%
! ATTTTCAATGTCAATGAACC+GGG - chr7_4:42977778-42977797 Msa1155140:intron 30.0%
AAAGGGAATGTAGGTTAATT+GGG - chr7_4:42977994-42978013 Msa1155140:intron 30.0%
! TTTTCATAAGAAACGATTCC+TGG + chr7_4:42978076-42978095 None:intergenic 30.0%
TCTTAAAGACGTGATGAATA+TGG - chr7_4:42978381-42978400 Msa1155140:CDS 30.0%
CTACGAAAAGGATAGATTTA+CGG + chr7_4:42978503-42978522 None:intergenic 30.0%
! CTTTTCGTAGAGAGAAAAAA+GGG - chr7_4:42978513-42978532 Msa1155140:CDS 30.0%
GAGAAAAAAGGGTAACATAT+AGG - chr7_4:42978524-42978543 Msa1155140:CDS 30.0%
TCATTAGTCAACATGAAACT+AGG + chr7_4:42978620-42978639 None:intergenic 30.0%
TTCTAAGTTACTTCATGTTG+TGG - chr7_4:42978802-42978821 Msa1155140:intron 30.0%
! AATTAATCAGGTTGCAAGTT+GGG - chr7_4:42978940-42978959 Msa1155140:intron 30.0%
TTGGAAAAAACTAGTTCAGA+AGG - chr7_4:42979429-42979448 Msa1155140:intron 30.0%
TGGAAAAAACTAGTTCAGAA+GGG - chr7_4:42979430-42979449 Msa1155140:intron 30.0%
AAGATATTGAATTGTGACCA+CGG - chr7_4:42979606-42979625 Msa1155140:CDS 30.0%
ACCAAAAAAAACTGATGTCA+CGG - chr7_4:42979704-42979723 Msa1155140:intron 30.0%
! CTTTATCATCTAAGTGGTTT+TGG + chr7_4:42979894-42979913 None:intergenic 30.0%
CAAACTCTTTATCATCTAAG+TGG + chr7_4:42979900-42979919 None:intergenic 30.0%
CAAGTAACTAAAGAGAAAAG+GGG + chr7_4:42980027-42980046 None:intergenic 30.0%
!! TCATTTTAGGTACACCAAAA+TGG - chr7_4:42980074-42980093 Msa1155140:intron 30.0%
! TGTCAAACATGTATCCATTT+TGG + chr7_4:42980091-42980110 None:intergenic 30.0%
TCTGACATAAAAGAAGTTAG+TGG - chr7_4:42980126-42980145 Msa1155140:intron 30.0%
TCAAAGAAAATACCGAGTTA+TGG - chr7_4:42980238-42980257 Msa1155140:intron 30.0%
ACTTGATATGAATGCTTACA+TGG - chr7_4:42980329-42980348 Msa1155140:intron 30.0%
CTTGATATGAATGCTTACAT+GGG - chr7_4:42980330-42980349 Msa1155140:intron 30.0%
! AATGATTGATGATCCAGTTT+GGG - chr7_4:42980368-42980387 Msa1155140:intron 30.0%
! TAAAATTGGTTGGTTAGGAA+CGG + chr7_4:42980505-42980524 None:intergenic 30.0%
CTGATTACAAAAAATGAGAG+AGG - chr7_4:42980641-42980660 Msa1155140:intron 30.0%
! AGCTCACTAAAATTTAGAGT+TGG - chr7_4:42980828-42980847 Msa1155140:intron 30.0%
! TTATAATTGTGCACTTTTGG+AGG - chr7_4:42980857-42980876 Msa1155140:intron 30.0%
CGATAAAGCTATACTATAAG+TGG + chr7_4:42980920-42980939 None:intergenic 30.0%
ATCAGCATGTATAAAGTCAT+AGG + chr7_4:42981151-42981170 None:intergenic 30.0%
GGACAGGTAAATTGTAAAAT+TGG - chr7_4:42981191-42981210 Msa1155140:CDS 30.0%
! TTGAGATGGATAGGATTTTA+AGG - chr7_4:42981338-42981357 Msa1155140:CDS 30.0%
TAGAATTACAGACCATGAAA+AGG - chr7_4:42981444-42981463 Msa1155140:CDS 30.0%
AGAATTACAGACCATGAAAA+GGG - chr7_4:42981445-42981464 Msa1155140:CDS 30.0%
! CTACAAGTATCTTTTCTCTT+TGG + chr7_4:42981477-42981496 None:intergenic 30.0%
! TTTTCCAACCCAATTTATGT+GGG - chr7_4:42981641-42981660 Msa1155140:five_prime_UTR 30.0%
TATTGCCCCAAAAAATTGTT+TGG - chr7_4:42981698-42981717 Msa1155140:five_prime_UTR 30.0%
ATTGCCCCAAAAAATTGTTT+GGG - chr7_4:42981699-42981718 Msa1155140:five_prime_UTR 30.0%
!!! TAAGCCCCAAACAATTTTTT+GGG + chr7_4:42981707-42981726 None:intergenic 30.0%
!!! ATAAGCCCCAAACAATTTTT+TGG + chr7_4:42981708-42981727 None:intergenic 30.0%
GGAGAGAAAGAGAAAGAAAA+GGG + chr7_4:42976969-42976988 None:intergenic 35.0%
!! AATTAGTTTGTGGGCAATCA+GGG + chr7_4:42977197-42977216 None:intergenic 35.0%
!! AAATTAGTTTGTGGGCAATC+AGG + chr7_4:42977198-42977217 None:intergenic 35.0%
!! TGGAGGTGAAATTAGTTTGT+GGG + chr7_4:42977206-42977225 None:intergenic 35.0%
TGCTGAAAAATCAAGAGTGA+TGG + chr7_4:42977241-42977260 None:intergenic 35.0%
CGATAAATTAAATTCTCCCG+AGG + chr7_4:42977381-42977400 None:intergenic 35.0%
GGTTCAAGAAAACTTAAACC+GGG + chr7_4:42977726-42977745 None:intergenic 35.0%
CGGTTCAAGAAAACTTAAAC+CGG + chr7_4:42977727-42977746 None:intergenic 35.0%
!! CGGTTTAAGTTTTCTTGAAC+CGG - chr7_4:42977725-42977744 Msa1155140:intron 35.0%
TTGTTGAACTAACCATAGAG+GGG + chr7_4:42977814-42977833 None:intergenic 35.0%
GTTGTTGAACTAACCATAGA+GGG + chr7_4:42977815-42977834 None:intergenic 35.0%
TGTTGTTGAACTAACCATAG+AGG + chr7_4:42977816-42977835 None:intergenic 35.0%
TAGAAAAATGAACCATGAGC+AGG - chr7_4:42977840-42977859 Msa1155140:intron 35.0%
AGAACGTTTGAGAATTGGAA+AGG - chr7_4:42977976-42977995 Msa1155140:intron 35.0%
GAACGTTTGAGAATTGGAAA+GGG - chr7_4:42977977-42977996 Msa1155140:intron 35.0%
GAAAGGGAATGTAGGTTAAT+TGG - chr7_4:42977993-42978012 Msa1155140:intron 35.0%
TAATCATTGTGCGAAACAGA+CGG - chr7_4:42978158-42978177 Msa1155140:intron 35.0%
TCCAGTCTATTATTGTGACT+TGG - chr7_4:42978346-42978365 Msa1155140:CDS 35.0%
ACCAAGTCACAATAATAGAC+TGG + chr7_4:42978350-42978369 None:intergenic 35.0%
!! GTCTATTATTGTGACTTGGT+TGG - chr7_4:42978350-42978369 Msa1155140:CDS 35.0%
!!! CCTTTTTTCTCTCTACGAAA+AGG + chr7_4:42978515-42978534 None:intergenic 35.0%
! CCTTTTCGTAGAGAGAAAAA+AGG - chr7_4:42978512-42978531 Msa1155140:CDS 35.0%
! GAATTAATCAGGTTGCAAGT+TGG - chr7_4:42978939-42978958 Msa1155140:intron 35.0%
! ATTAATCAGGTTGCAAGTTG+GGG - chr7_4:42978941-42978960 Msa1155140:intron 35.0%
!! TTGGTGTTATTGCCTCAATT+AGG - chr7_4:42979068-42979087 Msa1155140:intron 35.0%
ATATATATCCTTGTCGTGTC+CGG - chr7_4:42979165-42979184 Msa1155140:CDS 35.0%
GTTTGTGATCGTTAAGATTG+CGG - chr7_4:42979652-42979671 Msa1155140:CDS 35.0%
! GTTAAGATTGCGGAGAATTT+TGG - chr7_4:42979662-42979681 Msa1155140:CDS 35.0%
TTGGTCAAATGAGACTGATA+TGG - chr7_4:42979681-42979700 Msa1155140:intron 35.0%
!!! ACCGTGACATCAGTTTTTTT+TGG + chr7_4:42979708-42979727 None:intergenic 35.0%
!!! GGTCGCGGATTTTTTTTATA+AGG - chr7_4:42979725-42979744 Msa1155140:intron 35.0%
TATCACTGCCAAACTCTATT+TGG + chr7_4:42979871-42979890 None:intergenic 35.0%
! TTTATGCACCTTTTCGAAAG+TGG - chr7_4:42979950-42979969 Msa1155140:intron 35.0%
AAGAATCTCCACTTTCGAAA+AGG + chr7_4:42979961-42979980 None:intergenic 35.0%
! TCGAAAGTGGAGATTCTTTT+TGG - chr7_4:42979963-42979982 Msa1155140:intron 35.0%
! TCTTTTATGTCAGATACCTC+AGG + chr7_4:42980120-42980139 None:intergenic 35.0%
GACATAAAAGAAGTTAGTGG+TGG - chr7_4:42980129-42980148 Msa1155140:intron 35.0%
ATAAAAGAAGTTAGTGGTGG+AGG - chr7_4:42980132-42980151 Msa1155140:intron 35.0%
AACTCTCTTCTTCCATAACT+CGG + chr7_4:42980253-42980272 None:intergenic 35.0%
! CAATGATTGATGATCCAGTT+TGG - chr7_4:42980367-42980386 Msa1155140:intron 35.0%
ACAATATTCATGACCCAAAC+TGG + chr7_4:42980384-42980403 None:intergenic 35.0%
TTGGGTCATGAATATTGTTC+CGG - chr7_4:42980386-42980405 Msa1155140:intron 35.0%
TTAGGAACGGCTATTAGAAA+GGG + chr7_4:42980492-42980511 None:intergenic 35.0%
!! AAATGAGAGAGGTTTGCTAA+AGG - chr7_4:42980652-42980671 Msa1155140:intron 35.0%
GCTTTACACATTTCATCACA+TGG - chr7_4:42981050-42981069 Msa1155140:CDS 35.0%
TGTATAAAGTCATAGGTTCG+AGG + chr7_4:42981144-42981163 None:intergenic 35.0%
! TTCTCTTTTTACCCTCTATG+AGG - chr7_4:42981170-42981189 Msa1155140:CDS 35.0%
AATTTACCTGTCCTCATAGA+GGG + chr7_4:42981184-42981203 None:intergenic 35.0%
GTGTGACAGATGTAATATAG+AGG - chr7_4:42981306-42981325 Msa1155140:CDS 35.0%
ACATTCTTCTTGAGATGGAT+AGG - chr7_4:42981329-42981348 Msa1155140:CDS 35.0%
ATTTGCAGATGCAATGCAAT+GGG - chr7_4:42981417-42981436 Msa1155140:CDS 35.0%
! AGTATCTTTTCTCTTTGGTG+TGG + chr7_4:42981472-42981491 None:intergenic 35.0%
!!! TTGATTTTGTTCAGGTTGTG+GGG + chr7_4:42981521-42981540 None:intergenic 35.0%
!!! GTTGATTTTGTTCAGGTTGT+GGG + chr7_4:42981522-42981541 None:intergenic 35.0%
!!! TGTTGATTTTGTTCAGGTTG+TGG + chr7_4:42981523-42981542 None:intergenic 35.0%
TCACAAATCTCAAGACCAAA+AGG + chr7_4:42981568-42981587 None:intergenic 35.0%
! CTTTTCCAACCCAATTTATG+TGG - chr7_4:42981640-42981659 Msa1155140:five_prime_UTR 35.0%
TTGCCCCAAAAAATTGTTTG+GGG - chr7_4:42981700-42981719 Msa1155140:five_prime_UTR 35.0%
!!! AAGCCCCAAACAATTTTTTG+GGG + chr7_4:42981706-42981725 None:intergenic 35.0%
CATGAAACAAGTAACGTCCA+TGG - chr7_4:42976913-42976932 Msa1155140:three_prime_UTR 40.0%
CGATCAGCTATATGAAACCA+TGG + chr7_4:42976933-42976952 None:intergenic 40.0%
GAGAAAGAGAAAGAAAAGGG+TGG + chr7_4:42976966-42976985 None:intergenic 40.0%
CGGAGAGAAAGAGAAAGAAA+AGG + chr7_4:42976970-42976989 None:intergenic 40.0%
! AGTCTTGAGAGAGGTTTGTT+GGG + chr7_4:42977048-42977067 None:intergenic 40.0%
AGAAAGTAGAGTCTTGAGAG+AGG + chr7_4:42977057-42977076 None:intergenic 40.0%
! AAAAAAGGTGCAGAGGATGA+TGG + chr7_4:42977088-42977107 None:intergenic 40.0%
!!! TGCACCTTTTTTTACCTCCT+TGG - chr7_4:42977096-42977115 Msa1155140:CDS 40.0%
! GTGGAGGTGAAATTAGTTTG+TGG + chr7_4:42977207-42977226 None:intergenic 40.0%
! ATCAAGAGTGATGGAAGAAG+TGG + chr7_4:42977232-42977251 None:intergenic 40.0%
!! GGATTCATTTTGAAGGTGAC+CGG - chr7_4:42977559-42977578 Msa1155140:intron 40.0%
! GGTGCGTACATTGATGATAT+CGG - chr7_4:42977624-42977643 Msa1155140:intron 40.0%
! GTACGTTTTTCTTGAACTCC+CGG - chr7_4:42977705-42977724 Msa1155140:intron 40.0%
TTGGGTCCAAACCTTGAATA+GGG + chr7_4:42977879-42977898 None:intergenic 40.0%
GAGAATTGGAAAGGGAATGT+AGG - chr7_4:42977985-42978004 Msa1155140:intron 40.0%
TTCTTTCCTTAGTTGCTTCC+AGG - chr7_4:42978055-42978074 Msa1155140:intron 40.0%
AATCATTGTGCGAAACAGAC+GGG - chr7_4:42978159-42978178 Msa1155140:intron 40.0%
GTCACATGTGCACAAATTTG+TGG - chr7_4:42978839-42978858 Msa1155140:intron 40.0%
TGAGCTTCATGTGTATCTCT+TGG + chr7_4:42979010-42979029 None:intergenic 40.0%
! GTTCAATTTGCTCTTGAACG+AGG - chr7_4:42979031-42979050 Msa1155140:intron 40.0%
GCAATAACACCAATCAAAGC+TGG + chr7_4:42979061-42979080 None:intergenic 40.0%
AATTAAAATGTGTCGGGCAC+CGG + chr7_4:42979187-42979206 None:intergenic 40.0%
!! GAGGGTATTGGATTCTATCA+GGG - chr7_4:42979305-42979324 Msa1155140:CDS 40.0%
TATCAGGGCCACCAATAAAT+TGG - chr7_4:42979320-42979339 Msa1155140:CDS 40.0%
ATCAGGGCCACCAATAAATT+GGG - chr7_4:42979321-42979340 Msa1155140:CDS 40.0%
CAATGGCTCTCCCAATTTAT+TGG + chr7_4:42979334-42979353 None:intergenic 40.0%
CAATAAATTGGGAGAGCCAT+TGG - chr7_4:42979332-42979351 Msa1155140:CDS 40.0%
ACAGACTTCAATTGAGAGAG+TGG - chr7_4:42979393-42979412 Msa1155140:intron 40.0%
GAGTGGCAAAAAGTCTTTGT+TGG - chr7_4:42979410-42979429 Msa1155140:intron 40.0%
AGAAGGGTGACATTGCAATA+TGG - chr7_4:42979446-42979465 Msa1155140:intron 40.0%
! TAGACCCTTTTGTGATGCAA+AGG - chr7_4:42979522-42979541 Msa1155140:CDS 40.0%
GGATCCTTTGCATCACAAAA+GGG + chr7_4:42979529-42979548 None:intergenic 40.0%
AGGATCCTTTGCATCACAAA+AGG + chr7_4:42979530-42979549 None:intergenic 40.0%
GTATATTACCATGCTGAGTC+AGG + chr7_4:42979550-42979569 None:intergenic 40.0%
AAACTTCCACTGCTAATCCT+TGG + chr7_4:42980195-42980214 None:intergenic 40.0%
! AAGGATTAGCAGTGGAAGTT+TGG - chr7_4:42980194-42980213 Msa1155140:intron 40.0%
ATTAGCAGTGGAAGTTTGGA+TGG - chr7_4:42980198-42980217 Msa1155140:intron 40.0%
AGTAAATTACGGTATCTCCC+CGG + chr7_4:42980312-42980331 None:intergenic 40.0%
GATATGAATGCTTACATGGG+AGG - chr7_4:42980333-42980352 Msa1155140:intron 40.0%
! GTTTATGAACGCGGATTGAT+CGG - chr7_4:42980438-42980457 Msa1155140:intron 40.0%
TGATCGGAACATATCAGAAC+TGG - chr7_4:42980454-42980473 Msa1155140:intron 40.0%
GTTAGGAACGGCTATTAGAA+AGG + chr7_4:42980493-42980512 None:intergenic 40.0%
! TTTTTACCCTCTATGAGGAC+AGG - chr7_4:42981175-42981194 Msa1155140:CDS 40.0%
CAATTTACCTGTCCTCATAG+AGG + chr7_4:42981185-42981204 None:intergenic 40.0%
AGAGGACATTCTTCTTGAGA+TGG - chr7_4:42981324-42981343 Msa1155140:CDS 40.0%
!!! GATAGGATTTTAAGGCCACA+AGG - chr7_4:42981346-42981365 Msa1155140:CDS 40.0%
! TGTGATATTGCGTGATGATG+TGG - chr7_4:42981372-42981391 Msa1155140:CDS 40.0%
! TGATGTGGATGTGTTGTTGA+AGG - chr7_4:42981387-42981406 Msa1155140:CDS 40.0%
GATTTGCAGATGCAATGCAA+TGG - chr7_4:42981416-42981435 Msa1155140:CDS 40.0%
TTGTAGCAGTCAAGCAGTAT+TGG - chr7_4:42981491-42981510 Msa1155140:CDS 40.0%
GCAAACCACCCACATAAATT+GGG + chr7_4:42981652-42981671 None:intergenic 40.0%
TGCAAACCACCCACATAAAT+TGG + chr7_4:42981653-42981672 None:intergenic 40.0%
GGAAGAAAGAGGGTTTAGCT+TGG + chr7_4:42976824-42976843 None:intergenic 45.0%
GAGAGAGGAAGGAAGAAAGA+GGG + chr7_4:42976834-42976853 None:intergenic 45.0%
AGAGAGAGGAAGGAAGAAAG+AGG + chr7_4:42976835-42976854 None:intergenic 45.0%
CTTGTTTCATGAGAGTGACG+CGG + chr7_4:42976904-42976923 None:intergenic 45.0%
GAGTCTTGAGAGAGGTTTGT+TGG + chr7_4:42977049-42977068 None:intergenic 45.0%
! GGAGGTAAAAAAAGGTGCAG+AGG + chr7_4:42977095-42977114 None:intergenic 45.0%
GAGGCCAAGGAGGTAAAAAA+AGG + chr7_4:42977103-42977122 None:intergenic 45.0%
!!! TTTTTTACCTCCTTGGCCTC+TGG - chr7_4:42977103-42977122 Msa1155140:CDS 45.0%
! AAGAGTGATGGAAGAAGTGG+TGG + chr7_4:42977229-42977248 None:intergenic 45.0%
GATAAACCGATGTCGCATAC+CGG + chr7_4:42977315-42977334 None:intergenic 45.0%
!! GGTATGCGACATCGGTTTAT+CGG - chr7_4:42977314-42977333 Msa1155140:intron 45.0%
AGCGGTCGTTGAAATTTCCT+CGG - chr7_4:42977361-42977380 Msa1155140:intron 45.0%
TTATCGTGAGAGACACTGTC+CGG - chr7_4:42977395-42977414 Msa1155140:intron 45.0%
TAGCATACCAAGCCCAATCA+CGG + chr7_4:42977494-42977513 None:intergenic 45.0%
!! ATTTTGAAGGTGACCGGTTC+AGG - chr7_4:42977565-42977584 Msa1155140:intron 45.0%
AGAAAAACGTACCCCACAAC+CGG + chr7_4:42977697-42977716 None:intergenic 45.0%
TTCAATGTCAATGAACCGGG+TGG - chr7_4:42977781-42977800 Msa1155140:intron 45.0%
ACCATGAGCAGGAATGTGAT+TGG - chr7_4:42977851-42977870 Msa1155140:intron 45.0%
ACCAATCACATTCCTGCTCA+TGG + chr7_4:42977855-42977874 None:intergenic 45.0%
! TGTGATTGGTCCCCTATTCA+AGG - chr7_4:42977865-42977884 Msa1155140:intron 45.0%
TTGGTCCCCTATTCAAGGTT+TGG - chr7_4:42977870-42977889 Msa1155140:intron 45.0%
TGGGTCCAAACCTTGAATAG+GGG + chr7_4:42977878-42977897 None:intergenic 45.0%
GTTGGGTCCAAACCTTGAAT+AGG + chr7_4:42977880-42977899 None:intergenic 45.0%
ACGATTCCTGGAAGCAACTA+AGG + chr7_4:42978064-42978083 None:intergenic 45.0%
GACACTGCTAATATGTCACG+TGG + chr7_4:42978980-42978999 None:intergenic 45.0%
AGGGTAAGGAAGCCTAATTG+AGG + chr7_4:42979083-42979102 None:intergenic 45.0%
!! TCAAAGGCTCTAGAAGGGTA+AGG + chr7_4:42979097-42979116 None:intergenic 45.0%
!! CCATGTCAAAGGCTCTAGAA+GGG + chr7_4:42979102-42979121 None:intergenic 45.0%
AGAGCAATGAGCCATGTCAA+AGG + chr7_4:42979113-42979132 None:intergenic 45.0%
CTCTCGTTGCCTAATTCCTT+GGG - chr7_4:42979129-42979148 Msa1155140:CDS 45.0%
TCTCGTTGCCTAATTCCTTG+GGG - chr7_4:42979130-42979149 Msa1155140:CDS 45.0%
TATTTACCATTCTGGCCCCA+AGG + chr7_4:42979148-42979167 None:intergenic 45.0%
GATAGAATCCAATACCCTCC+AGG + chr7_4:42979304-42979323 None:intergenic 45.0%
!! GGAGGGTATTGGATTCTATC+AGG - chr7_4:42979304-42979323 Msa1155140:CDS 45.0%
TGGCTCTCCCAATTTATTGG+TGG + chr7_4:42979331-42979350 None:intergenic 45.0%
AATTGGGAGAGCCATTGGAA+AGG - chr7_4:42979337-42979356 Msa1155140:CDS 45.0%
ATTGGGAGAGCCATTGGAAA+GGG - chr7_4:42979338-42979357 Msa1155140:CDS 45.0%
AAAAACTGATGTCACGGTCG+CGG - chr7_4:42979710-42979729 Msa1155140:intron 45.0%
! GCTTGCTGCCAAATAGAGTT+TGG - chr7_4:42979860-42979879 Msa1155140:intron 45.0%
ATGTTTGACACCACTTCCTG+AGG - chr7_4:42980101-42980120 Msa1155140:intron 45.0%
ATGTCAGATACCTCAGGAAG+TGG + chr7_4:42980114-42980133 None:intergenic 45.0%
! GTGGTGGAGGATTATCCAAT+TGG - chr7_4:42980145-42980164 Msa1155140:intron 45.0%
! TGTTAGTCTCTCAGGCCAAT+TGG + chr7_4:42980163-42980182 None:intergenic 45.0%
! GGAACTGATGTTAGTCTCTC+AGG + chr7_4:42980171-42980190 None:intergenic 45.0%
GACTAACATCAGTTCCACCA+AGG - chr7_4:42980175-42980194 Msa1155140:intron 45.0%
TGATTATCAGCTAGCAGAGC+CGG - chr7_4:42980290-42980309 Msa1155140:intron 45.0%
CATGAATATTGTTCCGGTCC+AGG - chr7_4:42980392-42980411 Msa1155140:intron 45.0%
!! CTTGGTGTCGTTTATGAACG+CGG - chr7_4:42980429-42980448 Msa1155140:intron 45.0%
!!! ACTGCTTTTTGTCTCCACTC+AGG - chr7_4:42981097-42981116 Msa1155140:CDS 45.0%
GTCATAGGTTCGAGGATAAG+TGG + chr7_4:42981136-42981155 None:intergenic 45.0%
CGCAATATCACACTTCCTTG+TGG + chr7_4:42981364-42981383 None:intergenic 45.0%
!! TTTGGTGTGGTCCCTTTTCA+TGG + chr7_4:42981459-42981478 None:intergenic 45.0%
TCCAACCCAATTTATGTGGG+TGG - chr7_4:42981644-42981663 Msa1155140:five_prime_UTR 45.0%
ACCACCCACATAAATTGGGT+TGG + chr7_4:42981648-42981667 None:intergenic 45.0%
!!! ATAAGTTAAAATATTTTAAT+TGG - chr7_4:42978894-42978913 Msa1155140:intron 5.0%
!! TAATTAATATTTAAAAGAAT+AGG + chr7_4:42979578-42979597 None:intergenic 5.0%
!!! AACAAATAAATTATTTTTTT+TGG + chr7_4:42979995-42980014 None:intergenic 5.0%
!! AGGGTTTAGCTTGGACTGAG+GGG + chr7_4:42976815-42976834 None:intergenic 50.0%
!! GAGGGTTTAGCTTGGACTGA+GGG + chr7_4:42976816-42976835 None:intergenic 50.0%
!! AGAGGGTTTAGCTTGGACTG+AGG + chr7_4:42976817-42976836 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGGA+AGG + chr7_4:42976845-42976864 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr7_4:42976847-42976866 None:intergenic 50.0%
! TAGTTTGTGGGCAATCAGGG+CGG + chr7_4:42977194-42977213 None:intergenic 50.0%
! AGTGATGGAAGAAGTGGTGG+TGG + chr7_4:42977226-42977245 None:intergenic 50.0%
ATCGGAGTATACTCCGTGTG+AGG - chr7_4:42977332-42977351 Msa1155140:intron 50.0%
GCGGTCGTTGAAATTTCCTC+GGG - chr7_4:42977362-42977381 Msa1155140:intron 50.0%
CGGAGAATCTCCTCTTTCTC+CGG + chr7_4:42977417-42977436 None:intergenic 50.0%
CGGAGAAAGAGGAGATTCTC+CGG - chr7_4:42977415-42977434 Msa1155140:intron 50.0%
AAGAGGAGATTCTCCGGTGT+CGG - chr7_4:42977421-42977440 Msa1155140:intron 50.0%
TTCGGACGGACCCATCTTTA+AGG + chr7_4:42977662-42977681 None:intergenic 50.0%
! AACCGGTGTCTAAAGCGGTT+CGG + chr7_4:42977680-42977699 None:intergenic 50.0%
! CGAGGAGTTCCAGCTTTGAT+TGG - chr7_4:42979049-42979068 Msa1155140:intron 50.0%
!! CCCTTCTAGAGCCTTTGACA+TGG - chr7_4:42979099-42979118 Msa1155140:CDS 50.0%
!! GCCATGTCAAAGGCTCTAGA+AGG + chr7_4:42979103-42979122 None:intergenic 50.0%
GCTCTCGTTGCCTAATTCCT+TGG - chr7_4:42979128-42979147 Msa1155140:CDS 50.0%
CATTCTGGCCCCAAGGAATT+AGG + chr7_4:42979141-42979160 None:intergenic 50.0%
CTAATTCCTTGGGGCCAGAA+TGG - chr7_4:42979139-42979158 Msa1155140:CDS 50.0%
! GTTGATAGAGTGCTACGTCC+TGG - chr7_4:42979283-42979302 Msa1155140:CDS 50.0%
! ATAGAGTGCTACGTCCTGGA+GGG - chr7_4:42979287-42979306 Msa1155140:CDS 50.0%
CAAAGGATCCTGACTCAGCA+TGG - chr7_4:42979539-42979558 Msa1155140:CDS 50.0%
TGAATTCTCGATTGCGACCG+TGG + chr7_4:42979626-42979645 None:intergenic 50.0%
! GTTCCACCAAGGATTAGCAG+TGG - chr7_4:42980186-42980205 Msa1155140:intron 50.0%
CTTCCACTGCTAATCCTTGG+TGG + chr7_4:42980192-42980211 None:intergenic 50.0%
GATTATCAGCTAGCAGAGCC+GGG - chr7_4:42980291-42980310 Msa1155140:intron 50.0%
ATTATCAGCTAGCAGAGCCG+GGG - chr7_4:42980292-42980311 Msa1155140:intron 50.0%
! CAAGTGTGTTGATCTCAGCC+TGG + chr7_4:42980413-42980432 None:intergenic 50.0%
CAGGCTGAGATCAACACACT+TGG - chr7_4:42980411-42980430 Msa1155140:intron 50.0%
GGTTCGAGGATAAGTGGACA+TGG + chr7_4:42981130-42981149 None:intergenic 50.0%
! GGTGCAGAGGATGATGGTGA+AGG + chr7_4:42977082-42977101 None:intergenic 55.0%
! AGTTTTGCCAGAGGCCAAGG+AGG + chr7_4:42977113-42977132 None:intergenic 55.0%
! AGGAGTTTTGCCAGAGGCCA+AGG + chr7_4:42977116-42977135 None:intergenic 55.0%
! TGGTGGAGGAGTTTTGCCAG+AGG + chr7_4:42977122-42977141 None:intergenic 55.0%
GTGATTGTTGCCGGAGATGG+CGG + chr7_4:42977154-42977173 None:intergenic 55.0%
GTGGTGATTGTTGCCGGAGA+TGG + chr7_4:42977157-42977176 None:intergenic 55.0%
GGTGGAGTGGTGATTGTTGC+CGG + chr7_4:42977163-42977182 None:intergenic 55.0%
!! GATGGAAGAAGTGGTGGTGG+AGG + chr7_4:42977223-42977242 None:intergenic 55.0%
GAGACACTGTCCGGAGAAAG+AGG - chr7_4:42977404-42977423 Msa1155140:intron 55.0%
! GATTCTCCGGTGTCGGATAC+CGG - chr7_4:42977428-42977447 Msa1155140:intron 55.0%
TGTCGGATACCGGCACCATA+TGG - chr7_4:42977438-42977457 Msa1155140:intron 55.0%
CACCACCAGGAAACCTGAAC+CGG + chr7_4:42977581-42977600 None:intergenic 55.0%
! GGTTCAGGTTTCCTGGTGGT+GGG - chr7_4:42977580-42977599 Msa1155140:intron 55.0%
! GGTGTCTAAAGCGGTTCGGA+CGG + chr7_4:42977676-42977695 None:intergenic 55.0%
! GTCCGAACCGCTTTAGACAC+CGG - chr7_4:42977675-42977694 Msa1155140:intron 55.0%
! ACCGCTTTAGACACCGGTTG+TGG - chr7_4:42977681-42977700 Msa1155140:intron 55.0%
CCCACAACCGGTGTCTAAAG+CGG + chr7_4:42977685-42977704 None:intergenic 55.0%
! CCGCTTTAGACACCGGTTGT+GGG - chr7_4:42977682-42977701 Msa1155140:intron 55.0%
! CGCTTTAGACACCGGTTGTG+GGG - chr7_4:42977683-42977702 Msa1155140:intron 55.0%
TAGAGGGGAAGTGAACCACC+CGG + chr7_4:42977799-42977818 None:intergenic 55.0%
GGTGGTTCACTTCCCCTCTA+TGG - chr7_4:42977799-42977818 Msa1155140:intron 55.0%
! GATAGAGTGCTACGTCCTGG+AGG - chr7_4:42979286-42979305 Msa1155140:CDS 55.0%
! TGCTACGTCCTGGAGGGTAT+TGG - chr7_4:42979293-42979312 Msa1155140:CDS 55.0%
GGAGAGCCATTGGAAAGGGT+GGG - chr7_4:42979342-42979361 Msa1155140:CDS 55.0%
TCCTCTCCCACCCTTTCCAA+TGG + chr7_4:42979351-42979370 None:intergenic 55.0%
! GTGTTGATCTCAGCCTGGAC+CGG + chr7_4:42980408-42980427 None:intergenic 55.0%
GACATGGCTTCACACCTGAG+TGG + chr7_4:42981114-42981133 None:intergenic 55.0%
! ATTGTTGCCGGAGATGGCGG+CGG + chr7_4:42977151-42977170 None:intergenic 60.0%
!! ATCAGGGCGGATGATGGTGG+TGG + chr7_4:42977181-42977200 None:intergenic 60.0%
! GCAATCAGGGCGGATGATGG+TGG + chr7_4:42977184-42977203 None:intergenic 60.0%
TGGGCAATCAGGGCGGATGA+TGG + chr7_4:42977187-42977206 None:intergenic 60.0%
! AACGCGCCGGTATGCGACAT+CGG - chr7_4:42977306-42977325 Msa1155140:intron 60.0%
!! ATGGTGCCGGTATCCGACAC+CGG + chr7_4:42977437-42977456 None:intergenic 60.0%
ACGCGGTAGCCATATGGTGC+CGG + chr7_4:42977450-42977469 None:intergenic 60.0%
GTGGCCTGAGAGCCGTGATT+GGG - chr7_4:42977479-42977498 Msa1155140:CDS 60.0%
CAAGCCCAATCACGGCTCTC+AGG + chr7_4:42977486-42977505 None:intergenic 60.0%
CTGAGAGCCGTGATTGGGCT+TGG - chr7_4:42977484-42977503 Msa1155140:CDS 60.0%
! GGTGACCGGTTCAGGTTTCC+TGG - chr7_4:42977573-42977592 Msa1155140:intron 60.0%
! GACCGGTTCAGGTTTCCTGG+TGG - chr7_4:42977576-42977595 Msa1155140:intron 60.0%
! CGGTTCAGGTTTCCTGGTGG+TGG - chr7_4:42977579-42977598 Msa1155140:intron 60.0%
GGAAACATGGTCCCACCACC+AGG + chr7_4:42977594-42977613 None:intergenic 60.0%
GGTGGGACCATGTTTCCACG+TGG - chr7_4:42977597-42977616 Msa1155140:intron 60.0%
ACCATGTTTCCACGTGGCGC+TGG - chr7_4:42977603-42977622 Msa1155140:intron 60.0%
ACCAGCGCCACGTGGAAACA+TGG + chr7_4:42977607-42977626 None:intergenic 60.0%
GGGAGAGCCATTGGAAAGGG+TGG - chr7_4:42979341-42979360 Msa1155140:CDS 60.0%
GCCATTGGAAAGGGTGGGAG+AGG - chr7_4:42979347-42979366 Msa1155140:CDS 60.0%
!! GGCGGATGATGGTGGTGGAG+TGG + chr7_4:42977176-42977195 None:intergenic 65.0%
! CTGCGGATTCTGGTGGGTCG+GGG + chr7_4:42977275-42977294 None:intergenic 65.0%
! GCTGCGGATTCTGGTGGGTC+GGG + chr7_4:42977276-42977295 None:intergenic 65.0%
! CGCTGCGGATTCTGGTGGGT+CGG + chr7_4:42977277-42977296 None:intergenic 65.0%
CACGCGCTGCGGATTCTGGT+GGG + chr7_4:42977281-42977300 None:intergenic 65.0%
ACACGCGCTGCGGATTCTGG+TGG + chr7_4:42977282-42977301 None:intergenic 65.0%
GTCACACGCGCTGCGGATTC+TGG + chr7_4:42977285-42977304 None:intergenic 65.0%
CGCGTTAGTCACACGCGCTG+CGG + chr7_4:42977292-42977311 None:intergenic 65.0%
AGCGCGTGTGACTAACGCGC+CGG - chr7_4:42977293-42977312 Msa1155140:CDS 65.0%
CTCCGTGTGAGGACGTGCAG+CGG - chr7_4:42977343-42977362 Msa1155140:intron 65.0%
GACCGCTGCACGTCCTCACA+CGG + chr7_4:42977348-42977367 None:intergenic 65.0%
GGCGGAACGCGGTAGCCATA+TGG + chr7_4:42977456-42977475 None:intergenic 65.0%
TCACGGCTCTCAGGCCACCT+CGG + chr7_4:42977477-42977496 None:intergenic 65.0%
GGTGGCCTGAGAGCCGTGAT+TGG - chr7_4:42977478-42977497 Msa1155140:CDS 65.0%
ATGTACGCACCAGCGCCACG+TGG + chr7_4:42977615-42977634 None:intergenic 65.0%
AGGGTGGGAGAGGACTCGTG+AGG - chr7_4:42979357-42979376 Msa1155140:intron 65.0%
ACCACCTCCGCCGCCATCTC+CGG - chr7_4:42977141-42977160 Msa1155140:CDS 70.0%
ATGGCTACCGCGTTCCGCCG+AGG - chr7_4:42977457-42977476 Msa1155140:CDS 70.0%
!! GTCGGGCACCGGACACGACA+AGG + chr7_4:42979176-42979195 None:intergenic 70.0%
! GATGGCGGCGGAGGTGGTGG+TGG + chr7_4:42977139-42977158 None:intergenic 75.0%
! GGAGATGGCGGCGGAGGTGG+TGG + chr7_4:42977142-42977161 None:intergenic 75.0%
! GTTGCCGGAGATGGCGGCGG+AGG + chr7_4:42977148-42977167 None:intergenic 75.0%
GCTACCGCGTTCCGCCGAGG+TGG - chr7_4:42977460-42977479 Msa1155140:CDS 75.0%
CAGGCCACCTCGGCGGAACG+CGG + chr7_4:42977467-42977486 None:intergenic 75.0%
CGGCTCTCAGGCCACCTCGG+CGG + chr7_4:42977474-42977493 None:intergenic 75.0%
!!! GGCGGCGGAGGTGGTGGTGG+AGG + chr7_4:42977136-42977155 None:intergenic 80.0%
!! GCCGGAGATGGCGGCGGAGG+TGG + chr7_4:42977145-42977164 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 42976803 42981835 42976803 ID=Msa1155140;Name=Msa1155140
chr7_4 mRNA 42976803 42981835 42976803 ID=Msa1155140-mRNA-1;Parent=Msa1155140;Name=Msa1155140-mRNA-1;_AED=0.05;_eAED=0.05;_QI=206|1|1|1|1|1|6|280|638
chr7_4 exon 42976803 42977323 42976803 ID=Msa1155140-mRNA-1:exon:10673;Parent=Msa1155140-mRNA-1
chr7_4 exon 42977442 42977519 42977442 ID=Msa1155140-mRNA-1:exon:10672;Parent=Msa1155140-mRNA-1
chr7_4 exon 42978163 42978555 42978163 ID=Msa1155140-mRNA-1:exon:10671;Parent=Msa1155140-mRNA-1
chr7_4 exon 42979078 42979375 42979078 ID=Msa1155140-mRNA-1:exon:10670;Parent=Msa1155140-mRNA-1
chr7_4 exon 42979478 42979688 42979478 ID=Msa1155140-mRNA-1:exon:10669;Parent=Msa1155140-mRNA-1
chr7_4 exon 42980934 42981835 42980934 ID=Msa1155140-mRNA-1:exon:10668;Parent=Msa1155140-mRNA-1
chr7_4 five_prime_UTR 42981630 42981835 42981630 ID=Msa1155140-mRNA-1:five_prime_utr;Parent=Msa1155140-mRNA-1
chr7_4 CDS 42980934 42981629 42980934 ID=Msa1155140-mRNA-1:cds;Parent=Msa1155140-mRNA-1
chr7_4 CDS 42979478 42979688 42979478 ID=Msa1155140-mRNA-1:cds;Parent=Msa1155140-mRNA-1
chr7_4 CDS 42979078 42979375 42979078 ID=Msa1155140-mRNA-1:cds;Parent=Msa1155140-mRNA-1
chr7_4 CDS 42978163 42978555 42978163 ID=Msa1155140-mRNA-1:cds;Parent=Msa1155140-mRNA-1
chr7_4 CDS 42977442 42977519 42977442 ID=Msa1155140-mRNA-1:cds;Parent=Msa1155140-mRNA-1
chr7_4 CDS 42977083 42977323 42977083 ID=Msa1155140-mRNA-1:cds;Parent=Msa1155140-mRNA-1
chr7_4 three_prime_UTR 42976803 42977082 42976803 ID=Msa1155140-mRNA-1:three_prime_utr;Parent=Msa1155140-mRNA-1
Gene Sequence

>Msa1155140

ATGGCTAATTCTTTCTTATCAATTTTCAACAAGAAACCCAACAAACCTCTCTCAAGACTCTACTTTCTCACCTTCACCATCATCCTCTGCACCTTTTTTTACCTCCTTGGCCTCTGGCAAAACTCCTCCACCACCACCTCCGCCGCCATCTCCGGCAACAATCACCACTCCACCACCATCATCCGCCCTGATTGCCCACAAACTAATTTCACCTCCACCACCACTTCTTCCATCACTCTTGATTTTTCAGCACATCATAACGTCCCCGACCCACCAGAATCCGCAGCGCGTGTGACTAACGCGCCGGTATGCGACATCGGTTTATCGGAGTATACTCCGTGTGAGGACGTGCAGCGGTCGTTGAAATTTCCTCGGGAGAATTTAATTTATCGTGAGAGACACTGTCCGGAGAAAGAGGAGATTCTCCGGTGTCGGATACCGGCACCATATGGCTACCGCGTTCCGCCGAGGTGGCCTGAGAGCCGTGATTGGGCTTGGTATGCTAATGTGCCACATAAAGAATTGACGATTGAGAAAAAAAACCAGAATTGGATTCATTTTGAAGGTGACCGGTTCAGGTTTCCTGGTGGTGGGACCATGTTTCCACGTGGCGCTGGTGCGTACATTGATGATATCGGAAAACTCATCAACCTTAAAGATGGGTCCGTCCGAACCGCTTTAGACACCGGTTGTGGGGTTGCAAGTTGGGGAGCATATCTTTTGCCACGTGACATATTAGCAGTGTCATTTGCACCAAGAGATACACATGAAGCTCAAGTTCAATTTGCTCTTGAACGAGGAGTTCCAGCTTTGATTGGTGTTATTGCCTCAATTAGGCTTCCTTACCCTTCTAGAGCCTTTGACATGGCTCATTGCTCTCGTTGCCTAATTCCTTGGGGCCAGAATGATGGAATTTATTTAACTGAAGTTGATAGAGTGCTACGTCCTGGAGGGTATTGGATTCTATCAGGGCCACCAATAAATTGGGAGAGCCATTGGAAAGGGTGGGAGAGGACTCGTGAGGATCTAAATGCTGAACAGACTTCAATTGAGAGAGTGGCAAAAAGTCTTTGTTGGAAAAAACTAGTTCAGAAGGGTGACATTGCAATATGGCAAAAGCCTACTAATCATATTCATTGCAAAATAACAAGAAAGGTCTTCAAGAATAGACCCTTTTGTGATGCAAAGGATCCTGACTCAGCATGGTACACCAAAATGGATACATGTTTGACACCACTTCCTGAGGTATCTGACATAAAAGAAGTTAGTGGTGGAGGATTATCCAATTGGCCTGAGAGACTAACATCAGTTCCACCAAGGATTAGCAGTGGAAGTTTGGATGGAATCACAGCTGAGATGTTCAAAGAAAATACCGAGTTATGGAAGAAGAGAGTTGCATACTACAAGACACTTGATTATCAGCTAGCAGAGCCGGGGAGATACCGTAATTTACTTGATATGAATGCTTACATGGGAGGATTTGCAGCTGCAATGATTGATGATCCAGTTTGGGTCATGAATATTGTTCCGGTCCAGGCTGAGATCAACACACTTGGTGTCGTTTATGAACGCGGATTGATCGGAACATATCAGAACTGGTGTGAAGCCATGTCCACTTATCCTCGAACCTATGACTTTATACATGCTGATTCTCTTTTTACCCTCTATGAGGACAGATGTAATATAGAGGACATTCTTCTTGAGATGGATAGGATTTTAAGGCCACAAGGAAGTGTGATATTGCGTGATGATGTGGATGTGTTGTTGAAGGTAAAAAGATTTGCAGATGCAATGCAATGGGATGCTAGAATTACAGACCATGAAAAGGGACCACACCAAAGAGAAAAGATACTTGTAGCAGTCAAGCAGTATTGGACAGCCCCACAACCTGAACAAAATCAACAAAGAAAGTTATAA
Protein sequence

>Msa1155140

MANSFLSIFNKKPNKPLSRLYFLTFTIILCTFFYLLGLWQNSSTTTSAAISGNNHHSTTIIRPDCPQTNFTSTTTSSITLDFSAHHNVPDPPESAARVTNAPVCDIGLSEYTPCEDVQRSLKFPRENLIYRERHCPEKEEILRCRIPAPYGYRVPPRWPESRDWAWYANVPHKELTIEKKNQNWIHFEGDRFRFPGGGTMFPRGAGAYIDDIGKLINLKDGSVRTALDTGCGVASWGAYLLPRDILAVSFAPRDTHEAQVQFALERGVPALIGVIASIRLPYPSRAFDMAHCSRCLIPWGQNDGIYLTEVDRVLRPGGYWILSGPPINWESHWKGWERTREDLNAEQTSIERVAKSLCWKKLVQKGDIAIWQKPTNHIHCKITRKVFKNRPFCDAKDPDSAWYTKMDTCLTPLPEVSDIKEVSGGGLSNWPERLTSVPPRISSGSLDGITAEMFKENTELWKKRVAYYKTLDYQLAEPGRYRNLLDMNAYMGGFAAAMIDDPVWVMNIVPVQAEINTLGVVYERGLIGTYQNWCEAMSTYPRTYDFIHADSLFTLYEDRCNIEDILLEMDRILRPQGSVILRDDVDVLLKVKRFADAMQWDARITDHEKGPHQREKILVAVKQYWTAPQPEQNQQRKL*