AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1103450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103450 MtrunA17_Chr7g0233831 94.595 555 30 0 1 555 1 555 0.0 1098
Msa1103450 MtrunA17_Chr7g0233771 83.243 555 92 1 1 555 1 554 0.0 949
Msa1103450 MtrunA17_Chr7g0233801 78.739 555 116 2 1 555 1 553 0.0 898
Msa1103450 MtrunA17_Chr1g0147051 46.967 511 234 11 76 555 103 607 2.64e-157 462
Msa1103450 MtrunA17_Chr7g0269541 44.708 548 281 8 24 551 7 552 4.49e-155 455
Msa1103450 MtrunA17_Chr4g0069841 48.817 465 221 7 98 555 62 516 1.91e-151 444
Msa1103450 MtrunA17_Chr2g0302021 51.339 448 198 9 118 555 88 525 7.09e-151 443
Msa1103450 MtrunA17_Chr8g0345281 45.057 526 255 11 56 555 72 589 7.42e-148 437
Msa1103450 MtrunA17_Chr3g0126771 41.256 589 285 13 11 555 26 597 2.01e-146 434
Msa1103450 MtrunA17_Chr4g0011771 47.255 510 235 13 54 555 30 513 6.06e-144 425
Msa1103450 MtrunA17_Chr4g0069861 47.758 446 210 8 122 555 83 517 8.13e-141 417
Msa1103450 MtrunA17_Chr4g0011791 49.241 461 203 12 101 555 74 509 1.70e-140 416
Msa1103450 MtrunA17_Chr8g0391291 46.623 459 224 6 113 555 86 539 2.89e-139 414
Msa1103450 MtrunA17_Chr3g0079341 43.978 548 272 14 17 555 6 527 3.47e-139 413
Msa1103450 MtrunA17_Chr8g0391311 46.405 459 225 6 113 555 88 541 1.35e-138 412
Msa1103450 MtrunA17_Chr3g0079361 50.227 440 196 10 125 555 102 527 4.10e-137 408
Msa1103450 MtrunA17_Chr3g0090091 50.000 450 204 11 115 555 91 528 4.46e-137 408
Msa1103450 MtrunA17_Chr3g0079351 50.000 440 197 10 125 555 102 527 5.85e-137 407
Msa1103450 MtrunA17_Chr7g0272141 45.952 457 216 7 116 555 100 542 1.23e-134 402
Msa1103450 MtrunA17_Chr4g0011751 47.204 447 203 9 121 555 64 489 3.75e-133 396
Msa1103450 MtrunA17_Chr4g0018371 47.260 438 218 6 125 555 108 539 1.09e-131 394
Msa1103450 MtrunA17_Chr7g0269531 43.077 520 255 10 73 555 50 565 8.74e-129 388
Msa1103450 MtrunA17_Chr1g0175661 45.455 473 209 11 122 555 96 558 1.67e-128 387
Msa1103450 MtrunA17_Chr4g0069881 40.632 475 265 6 84 555 75 535 3.49e-127 383
Msa1103450 MtrunA17_Chr3g0080391 41.489 470 255 8 98 555 113 574 1.72e-125 380
Msa1103450 MtrunA17_Chr8g0354901 40.344 523 284 12 48 555 72 581 2.17e-125 380
Msa1103450 MtrunA17_Chr1g0192331 41.561 551 275 14 22 555 8 528 1.64e-124 375
Msa1103450 MtrunA17_Chr7g0269511 43.952 496 240 11 95 555 72 564 4.60e-124 376
Msa1103450 MtrunA17_Chr1g0195301 41.948 503 238 11 100 555 60 555 2.02e-122 371
Msa1103450 MtrunA17_Chr1g0195321 41.948 503 238 11 100 555 60 555 2.02e-122 371
Msa1103450 MtrunA17_Chr1g0195331 42.147 503 237 11 100 555 60 555 2.95e-122 371
Msa1103450 MtrunA17_Chr4g0069891 39.122 524 280 13 56 555 85 593 2.66e-119 364
Msa1103450 MtrunA17_Chr8g0345211 42.054 516 261 12 56 551 81 578 3.30e-119 363
Msa1103450 MtrunA17_Chr1g0195351 41.551 503 238 12 100 555 60 553 4.24e-117 357
Msa1103450 MtrunA17_Chr7g0269521 42.887 471 225 10 122 555 99 562 1.82e-116 356
Msa1103450 MtrunA17_Chr8g0354911 41.116 484 233 8 116 555 137 612 1.42e-113 350
Msa1103450 MtrunA17_Chr1g0194091 40.000 470 242 7 120 555 106 569 3.09e-113 348
Msa1103450 MtrunA17_Chr1g0194081 37.285 523 294 9 56 555 52 563 1.10e-111 344
Msa1103450 MtrunA17_Chr1g0192311 40.667 450 248 10 118 551 120 566 4.16e-111 343
Msa1103450 MtrunA17_Chr1g0192281 40.667 450 248 10 118 551 120 566 4.16e-111 343
Msa1103450 MtrunA17_Chr3g0080381 41.580 481 237 9 116 555 151 628 2.81e-110 342
Msa1103450 MtrunA17_Chr1g0192321 38.586 495 264 11 93 554 95 582 5.40e-109 337
Msa1103450 MtrunA17_Chr7g0272151 34.552 547 317 11 36 554 49 582 1.89e-107 333
Msa1103450 MtrunA17_Chr4g0000121 39.690 451 251 9 118 551 107 553 7.05e-107 332
Msa1103450 MtrunA17_Chr1g0195311 55.160 281 117 5 279 555 39 314 2.44e-105 319
Msa1103450 MtrunA17_Chr1g0192301 39.024 451 254 9 118 551 125 571 1.43e-104 326
Msa1103450 MtrunA17_Chr7g0270661 38.411 453 241 7 120 539 106 553 7.00e-101 316
Msa1103450 MtrunA17_Chr7g0270671 38.411 453 241 7 120 539 106 553 7.00e-101 316
Msa1103450 MtrunA17_Chr7g0270651 34.423 520 299 9 56 545 46 553 2.15e-99 312
Msa1103450 MtrunA17_Chr2g0295531 35.639 477 289 8 88 552 73 543 7.43e-99 312
Msa1103450 MtrunA17_Chr4g0067611 35.756 509 284 14 77 554 75 571 5.66e-96 303
Msa1103450 MtrunA17_Chr7g0270631 36.975 476 258 9 104 545 74 541 2.50e-95 314
Msa1103450 MtrunA17_Chr7g0270631 36.009 461 253 10 120 544 642 1096 5.33e-85 286
Msa1103450 MtrunA17_Chr2g0295551 37.107 477 267 12 106 554 92 563 1.37e-94 300
Msa1103450 MtrunA17_Chr7g0234711 61.233 227 85 2 330 555 45 269 3.10e-94 288
Msa1103450 MtrunA17_Chr4g0067601 35.294 510 285 12 77 554 75 571 5.06e-94 298
Msa1103450 MtrunA17_Chr7g0270691 35.022 454 269 8 120 555 104 549 2.53e-91 291
Msa1103450 MtrunA17_Chr2g0301931 49.129 287 137 5 270 555 14 292 8.22e-90 278
Msa1103450 MtrunA17_Chr8g0384121 34.226 523 301 13 56 554 60 563 1.46e-89 286
Msa1103450 MtrunA17_Chr3g0129921 33.390 584 313 19 19 554 8 563 2.74e-88 283
Msa1103450 MtrunA17_Chr2g0302001 46.619 281 141 4 278 555 163 437 7.91e-87 275
Msa1103450 MtrunA17_Chr2g0295541 32.423 586 302 16 57 554 15 594 9.05e-87 280
Msa1103450 MtrunA17_Chr5g0437831 38.529 340 198 5 221 555 50 383 3.51e-80 256
Msa1103450 MtrunA17_Chr8g0380581 38.710 341 201 5 214 552 39 373 1.04e-78 252
Msa1103450 MtrunA17_Chr7g0268241 40.190 316 175 4 241 555 48 350 5.55e-74 239
Msa1103450 MtrunA17_Chr2g0334111 39.683 315 174 4 242 555 24 323 2.29e-72 234
Msa1103450 MtrunA17_Chr7g0271381 32.115 520 306 18 56 555 64 556 1.94e-63 217
Msa1103450 MtrunA17_Chr6g0487101 36.066 305 167 7 251 544 93 380 1.08e-48 173
Msa1103450 MtrunA17_Chr6g0453551 32.026 306 182 7 243 538 6 295 4.50e-48 169
Msa1103450 MtrunA17_Chr1g0194311 33.333 315 183 8 240 544 71 368 9.15e-48 170
Msa1103450 MtrunA17_Chr8g0389771 34.603 315 174 8 244 544 81 377 5.63e-46 166
Msa1103450 MtrunA17_Chr2g0299431 39.224 232 138 2 218 448 29 258 9.33e-46 162
Msa1103450 MtrunA17_Chr8g0391261 53.237 139 63 1 417 555 30 166 6.78e-45 156
Msa1103450 MtrunA17_Chr7g0258341 32.268 313 188 6 243 545 90 388 9.51e-44 160
Msa1103450 MtrunA17_Chr7g0217941 30.742 283 173 4 245 517 8 277 2.39e-43 157
Msa1103450 MtrunA17_Chr5g0446301 33.010 309 178 7 249 545 67 358 1.75e-42 155
Msa1103450 MtrunA17_Chr4g0070051 31.629 313 182 8 243 545 54 344 8.36e-41 150
Msa1103450 MtrunA17_Chr6g0466961 32.143 280 165 5 243 517 40 299 1.53e-40 149
Msa1103450 MtrunA17_Chr6g0466951 30.851 282 170 6 241 517 67 328 8.12e-39 145
Msa1103450 MtrunA17_Chr4g0037751 31.833 311 183 9 243 544 71 361 2.71e-37 141
Msa1103450 MtrunA17_Chr5g0399221 29.114 316 197 6 243 547 63 362 3.05e-37 141
Msa1103450 MtrunA17_Chr5g0420831 31.395 344 195 11 215 544 45 361 6.70e-37 140
Msa1103450 MtrunA17_Chr1g0161731 31.022 274 167 5 251 517 57 315 1.31e-36 139
Msa1103450 MtrunA17_Chr7g0265201 30.844 308 180 8 248 546 104 387 7.95e-33 129
Msa1103450 MtrunA17_Chr7g0234731 38.389 211 110 8 124 326 120 318 1.11e-31 124
Msa1103450 MtrunA17_Chr8g0391281 34.211 228 131 5 113 324 86 310 5.52e-31 122
Msa1103450 MtrunA17_Chr5g0440871 27.273 308 202 6 239 546 35 320 3.77e-30 120
Msa1103450 MtrunA17_Chr2g0294321 28.923 325 203 9 228 544 42 346 1.56e-29 119
Msa1103450 MtrunA17_Chr6g0459781 35.465 172 99 3 243 404 13 182 8.99e-26 105
Msa1103450 MtrunA17_Chr2g0314691 32.020 203 119 5 344 544 16 201 1.90e-25 104
Msa1103450 MtrunA17_Chr8g0351871 25.704 284 184 6 243 517 33 298 6.42e-25 105
Msa1103450 MtrunA17_Chr4g0025841 29.278 263 169 4 230 492 24 269 1.15e-23 100
Msa1103450 MtrunA17_Chr2g0295851 25.714 350 223 9 198 544 21 336 8.19e-23 99.8
Msa1103450 MtrunA17_Chr5g0437821 32.576 132 88 1 356 486 4 135 2.66e-22 93.2
Msa1103450 MtrunA17_Chr5g0440901 31.126 151 94 2 337 487 3 143 2.43e-19 85.1
Msa1103450 MtrunA17_Chr7g0265161 30.168 179 92 4 312 485 9 159 1.85e-17 82.0
Msa1103450 MtrunA17_Chr5g0440891 30.000 160 105 2 243 402 48 200 1.23e-15 75.9
Msa1103450 MtrunA17_Chr6g0459791 37.302 126 64 5 420 544 5 116 8.35e-15 71.2
Msa1103450 MtrunA17_Chr4g0073911 30.286 175 112 4 259 426 24 195 3.15e-14 72.8
Msa1103450 MtrunA17_Chr6g0460141 31.429 140 88 3 271 402 5 144 1.65e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103450 AT1G11580.1 56.814 565 221 9 3 555 4 557 0.0 618
Msa1103450 AT1G11580.2 56.814 565 221 9 3 555 25 578 0.0 617
Msa1103450 AT5G53370.1 47.234 470 228 7 102 555 120 585 9.88e-146 432
Msa1103450 AT5G53370.2 47.234 470 228 7 102 555 156 621 1.62e-145 433
Msa1103450 AT3G43270.1 46.186 472 234 7 100 555 58 525 8.15e-144 426
Msa1103450 AT2G45220.1 47.082 514 224 16 55 555 33 511 8.23e-143 422
Msa1103450 AT3G49220.1 47.007 451 223 5 118 555 149 596 1.35e-141 422
Msa1103450 AT3G49220.3 47.007 451 223 5 118 555 194 641 3.42e-141 422
Msa1103450 AT3G59010.1 49.011 455 201 9 116 555 90 528 4.34e-138 411
Msa1103450 AT4G33220.1 41.869 535 255 12 64 555 2 523 1.20e-137 409
Msa1103450 AT3G14310.1 45.868 484 221 7 109 555 113 592 5.85e-135 405
Msa1103450 AT2G43050.1 47.964 442 198 10 123 555 98 516 7.99e-135 402
Msa1103450 AT1G11590.1 47.248 436 215 7 127 555 97 524 2.13e-133 399
Msa1103450 AT4G02320.1 41.188 505 264 8 73 555 25 518 8.82e-133 397
Msa1103450 AT4G02300.1 42.515 501 261 8 68 555 46 532 3.11e-131 393
Msa1103450 AT4G03930.1 45.057 435 226 6 127 555 97 524 4.20e-131 393
Msa1103450 AT5G04960.1 46.136 440 217 5 122 551 131 560 2.82e-130 392
Msa1103450 AT1G53830.1 44.685 508 243 9 79 555 87 587 4.86e-130 392
Msa1103450 AT5G27870.1 42.605 453 238 6 118 555 117 562 1.62e-129 395
Msa1103450 AT2G26440.1 40.762 525 285 8 47 555 33 547 8.62e-129 387
Msa1103450 AT4G33220.2 52.907 344 154 4 213 555 66 402 9.21e-129 382
Msa1103450 AT3G05610.1 43.668 458 228 9 118 555 118 565 1.00e-128 391
Msa1103450 AT3G60730.1 43.871 465 221 6 120 555 66 519 6.35e-128 384
Msa1103450 AT3G05620.1 41.135 564 274 15 21 555 7 541 9.13e-128 385
Msa1103450 AT3G27980.1 47.146 403 199 6 156 555 106 497 2.56e-126 379
Msa1103450 AT5G51490.1 46.829 410 201 4 154 555 136 536 2.99e-124 375
Msa1103450 AT5G51500.1 44.989 449 228 7 118 555 100 540 1.23e-123 374
Msa1103450 AT3G47400.1 44.912 452 232 7 116 555 148 594 2.00e-120 368
Msa1103450 AT3G10710.1 41.722 453 250 7 108 555 118 561 1.48e-118 362
Msa1103450 AT1G53840.1 40.891 516 258 15 63 549 84 581 1.22e-117 360
Msa1103450 AT1G02810.1 40.304 526 243 13 93 555 60 577 1.26e-117 360
Msa1103450 AT5G49180.1 36.964 560 315 13 18 551 19 566 1.43e-116 357
Msa1103450 AT2G47550.1 43.215 479 230 13 111 555 88 558 2.86e-116 356
Msa1103450 AT4G02330.1 41.165 515 244 12 93 555 64 571 5.12e-116 355
Msa1103450 AT1G23200.1 40.726 496 240 9 100 555 73 554 1.94e-114 351
Msa1103450 AT2G26450.1 38.367 490 261 10 93 555 136 611 2.33e-114 353
Msa1103450 AT4G33230.1 38.600 500 274 10 80 555 116 606 1.67e-113 350
Msa1103450 AT5G20860.2 43.694 444 228 10 122 555 107 538 8.85e-113 346
Msa1103450 AT3G14300.1 40.443 497 257 10 69 541 473 954 1.54e-110 352
Msa1103450 AT4G00190.1 42.117 463 229 12 100 552 38 471 1.57e-110 338
Msa1103450 AT3G10720.2 41.684 487 237 13 112 555 133 615 2.19e-108 337
Msa1103450 AT5G04970.1 40.825 485 225 11 119 555 150 620 1.55e-105 330
Msa1103450 AT3G06830.1 39.421 449 246 11 126 552 121 565 7.18e-105 327
Msa1103450 AT1G11370.1 58.197 244 102 0 240 483 43 286 1.46e-103 313
Msa1103450 AT4G15980.1 44.800 375 199 5 182 551 327 698 1.17e-98 314
Msa1103450 AT4G15980.2 44.800 375 199 5 182 551 337 708 1.58e-98 314
Msa1103450 AT3G10720.1 53.817 262 118 2 294 555 1 259 2.56e-94 289
Msa1103450 AT5G20860.1 40.559 429 205 9 122 540 107 495 2.73e-91 290
Msa1103450 AT2G47030.1 41.918 365 192 6 204 555 231 588 1.22e-86 280
Msa1103450 AT5G09760.1 35.645 519 282 16 56 543 49 546 5.07e-86 277
Msa1103450 AT5G09760.2 35.645 519 282 16 56 543 75 572 8.00e-86 277
Msa1103450 AT5G64640.1 35.741 526 265 18 65 547 106 601 9.88e-85 275
Msa1103450 AT2G47040.1 41.989 362 193 6 204 555 241 595 6.96e-84 273
Msa1103450 AT3G62170.1 36.652 442 231 9 158 555 152 588 5.52e-80 262
Msa1103450 AT1G44980.1 42.174 230 127 3 181 407 16 242 4.02e-54 184
Msa1103450 AT2G21610.1 34.098 305 177 7 243 545 51 333 1.81e-46 167
Msa1103450 AT2G21610.2 34.098 305 177 7 243 545 56 338 2.11e-46 166
Msa1103450 AT3G29090.1 31.579 285 172 4 243 517 7 278 2.73e-46 165
Msa1103450 AT1G05310.1 32.710 321 186 6 238 545 86 389 3.59e-46 167
Msa1103450 AT5G19730.1 33.987 306 174 7 251 545 94 382 3.34e-44 161
Msa1103450 AT2G36710.1 32.602 319 192 7 240 549 86 390 4.08e-44 162
Msa1103450 AT2G36700.1 32.899 307 182 6 245 544 44 333 6.76e-44 159
Msa1103450 AT2G19150.1 30.721 319 199 6 239 551 37 339 9.29e-37 140
Msa1103450 AT5G47500.1 28.435 313 197 6 243 544 61 357 3.76e-36 139
Msa1103450 AT5G07430.1 28.495 372 221 11 195 544 7 355 8.39e-36 137
Msa1103450 AT5G55590.1 30.625 320 191 9 239 545 78 379 4.31e-35 136
Msa1103450 AT5G07420.1 30.547 311 185 9 243 544 67 355 1.39e-34 134
Msa1103450 AT3G17060.1 28.155 309 199 6 242 544 45 336 3.14e-34 133
Msa1103450 AT3G49220.2 34.335 233 136 5 118 337 194 422 1.03e-33 133
Msa1103450 AT5G18990.1 30.070 286 174 5 243 517 29 299 1.43e-33 130
Msa1103450 AT3G24130.1 29.431 299 184 6 231 517 21 304 3.70e-33 129
Msa1103450 AT2G19150.2 31.395 258 164 3 239 492 37 285 6.80e-33 127
Msa1103450 AT1G69940.1 28.746 327 201 10 229 544 50 355 1.96e-32 128
Msa1103450 AT5G55590.2 31.418 261 153 7 239 486 78 325 1.99e-32 127
Msa1103450 AT5G61680.1 28.939 311 191 8 243 544 69 358 5.95e-32 127
Msa1103450 AT5G07410.1 28.440 327 202 10 229 544 50 355 1.01e-31 126
Msa1103450 AT5G26810.1 27.193 342 206 7 231 546 11 335 5.38e-29 118
Msa1103450 AT2G47280.1 29.010 293 184 5 234 517 26 303 1.28e-28 117

Find 131 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGTGATGCAATCCTTTC+TGG 0.106056 7_3:-39291970 Msa1103450:CDS
ACTTGTCGATGAACAGAATT+TGG 0.169985 7_3:-39293215 Msa1103450:CDS
TGGCTGCGCCTGCCGTATTT+TGG 0.184844 7_3:+39292360 None:intergenic
TTGGTTGGCCATGGGCTTTC+GGG 0.209872 7_3:+39292148 None:intergenic
GTATGTTATCTATGTGAAAA+AGG 0.237847 7_3:-39292797 Msa1103450:CDS
TCTTGAGATGAGTAGAAATA+AGG 0.241933 7_3:+39293508 None:intergenic
TTTGGTTGGCCATGGGCTTT+CGG 0.265463 7_3:+39292147 None:intergenic
GGTACCATTGACTTCATCTT+TGG 0.274786 7_3:-39292209 Msa1103450:CDS
GGGCCACCAACTTGCACTTC+TGG 0.282244 7_3:+39292168 None:intergenic
AAGCAAAGATAGGAGGCTTT+TGG 0.282961 7_3:-39292932 Msa1103450:CDS
ACCTGGGTCTTCTCGACCTT+GGG 0.284528 7_3:+39292109 None:intergenic
TCAAAGACATTTCTTCTCTA+TGG 0.294262 7_3:+39293259 None:intergenic
TACAAAGAGAACATAGAAAT+TGG 0.317816 7_3:-39292769 Msa1103450:CDS
CTTCTCTATGGCTGTTAATT+CGG 0.330900 7_3:+39293271 None:intergenic
TTCATTGATGAAACATTGAT+TGG 0.340270 7_3:-39292976 Msa1103450:CDS
TGTAGTAGACTTGGTTAATA+AGG 0.343794 7_3:+39293335 None:intergenic
TTTGTAGCTGCGGTTGGGGA+TGG 0.349919 7_3:-39292407 Msa1103450:intron
TCAGACCTTAAGCCCGTTGC+GGG 0.354862 7_3:-39292041 Msa1103450:CDS
TACCGTGACTCCGTCATTAC+AGG 0.354963 7_3:-39292230 Msa1103450:CDS
TCAATGTTTCATCAATGAAT+TGG 0.363111 7_3:+39292980 None:intergenic
AGGTACATCTCGGGTCATTA+TGG 0.382270 7_3:-39293085 Msa1103450:CDS
CATTATGGAAAATGACCTTC+AGG 0.392665 7_3:-39293070 Msa1103450:CDS
GGTTTATAGCACAAGACATT+TGG 0.398305 7_3:-39292385 Msa1103450:CDS
GGGCTCCATCAAAACATTCC+TGG 0.399653 7_3:-39292021 Msa1103450:CDS
GGGCTGTAAACATGTTGTTT+TGG 0.401016 7_3:+39292129 None:intergenic
AACTAATCCAAGGAAATGTT+TGG 0.403386 7_3:-39291764 Msa1103450:CDS
ACTTGCTTGGATGGATTAGA+AGG 0.410175 7_3:-39293105 Msa1103450:CDS
TTTCTGAAAACATTGTATTA+CGG 0.410608 7_3:-39291894 Msa1103450:CDS
TAAGGTCTGAACTTGGTGTT+AGG 0.411739 7_3:+39292054 None:intergenic
TTGTAGCTGCGGTTGGGGAT+GGG 0.413401 7_3:-39292406 Msa1103450:intron
GACCTGGGTCTTCTCGACCT+TGG 0.420657 7_3:+39292108 None:intergenic
AGACATTTGGTTCCAAAATA+CGG 0.422166 7_3:-39292372 Msa1103450:CDS
CCCACTCAGCCCATCCTGTT+GGG 0.422248 7_3:+39291934 None:intergenic
CTCTTTACGCACACTCCAAT+AGG 0.427351 7_3:-39292259 Msa1103450:CDS
CACGAACCATGCAACTTGCT+TGG 0.427409 7_3:-39293118 Msa1103450:CDS
TGGAGCCCGCAACGGGCTTA+AGG 0.428606 7_3:+39292036 None:intergenic
TACTTTGTCTTACCATTGTC+AGG 0.437385 7_3:+39292817 None:intergenic
GAGAGCCACTGCCTGGTGCT+TGG 0.443278 7_3:+39292340 None:intergenic
AACCATGCAACTTGCTTGGA+TGG 0.446545 7_3:-39293114 Msa1103450:CDS
TCTTCAACCAAACATTTCCT+TGG 0.448984 7_3:+39291757 None:intergenic
GGCAGGCGCAGCCAAGCACC+AGG 0.455345 7_3:-39292351 Msa1103450:CDS
CTTGAGATGAGTAGAAATAA+GGG 0.456619 7_3:+39293509 None:intergenic
TGAGTGGGATGCTGCGAGTA+AGG 0.459391 7_3:-39291919 Msa1103450:CDS
GTCACGGTAAAATTGCCTAT+TGG 0.463466 7_3:+39292244 None:intergenic
GTCCGCGGTTGGGGACATAA+AGG 0.463856 7_3:-39292908 Msa1103450:CDS
CGTGGGTTACAAGCAAAGAT+AGG 0.464160 7_3:-39292942 Msa1103450:CDS
CGCAGCCAAGCACCAGGCAG+TGG 0.464837 7_3:-39292345 Msa1103450:CDS
GAGTGACTGTGAAGAACTAA+TGG 0.471419 7_3:-39293238 Msa1103450:CDS
AGTATCTCACGTCCCAACTT+TGG 0.472472 7_3:-39293394 Msa1103450:CDS
GTCCTGGAATATTTCTTCCA+TGG 0.474721 7_3:+39291993 None:intergenic
ATATTACAAGCCTTCGGTAA+AGG 0.475251 7_3:+39291722 None:intergenic
CAAGACTGTGGCTGAGGCTG+TGG 0.477930 7_3:-39292848 Msa1103450:CDS
TCCCACTCAGCCCATCCTGT+TGG 0.478365 7_3:+39291933 None:intergenic
GGCTCCATCAAAACATTCCT+GGG 0.481037 7_3:-39292020 Msa1103450:CDS
ACAATAGTACATGCAAGCTT+TGG 0.482029 7_3:+39293358 None:intergenic
CTTGTCGATGAACAGAATTT+GGG 0.483045 7_3:-39293214 Msa1103450:CDS
TCCTGGAATATTTCTTCCAT+GGG 0.487568 7_3:+39291994 None:intergenic
GCCCATGGAAGAAATATTCC+AGG 0.490494 7_3:-39291995 Msa1103450:CDS
GACAGCCACATTGACCCAAC+AGG 0.508812 7_3:-39291948 Msa1103450:CDS
GCCAAGAGAGTCACTTGGCC+AGG 0.512980 7_3:-39291837 Msa1103450:CDS
CAAGTTCAAGACTGTGGCTG+AGG 0.513507 7_3:-39292854 Msa1103450:CDS
ATTTCTTCCATGGGCGACCC+AGG 0.514021 7_3:+39292003 None:intergenic
ATGTTCATATTACAAGCCTT+CGG 0.514225 7_3:+39291716 None:intergenic
AGCTAGGGAAGATCTAGCTC+TGG 0.523111 7_3:+39293038 None:intergenic
GATTGGAGAATTTCCTTCGT+GGG 0.523944 7_3:-39292959 Msa1103450:CDS
GATAACATTAGCTGTGTCCA+TGG 0.524887 7_3:+39293299 None:intergenic
TTGGATGTGTGTAGTAGACT+TGG 0.530040 7_3:+39293326 None:intergenic
GGATTGCATCACAACAGTCC+TGG 0.534374 7_3:+39291977 None:intergenic
ATGAACAACGGACCAGGTGC+TGG 0.539031 7_3:-39291864 Msa1103450:CDS
AAACAACAAGAAACACAGCT+AGG 0.539292 7_3:+39293022 None:intergenic
AAACATTCCTGGGTCGCCCA+TGG 0.547284 7_3:-39292010 Msa1103450:CDS
GTTCCAGAAGTGCAAGTTGG+TGG 0.551113 7_3:-39292171 Msa1103450:CDS
ATTTGGTTCCAAAATACGGC+AGG 0.554840 7_3:-39292368 Msa1103450:CDS
ACCTGGCCAAGTGACTCTCT+TGG 0.556537 7_3:+39291836 None:intergenic
CATATCAAGATGCACATACA+TGG 0.557277 7_3:-39293155 Msa1103450:CDS
CGACACGGAGAGCCACTGCC+TGG 0.558715 7_3:+39292333 None:intergenic
GATGCTCGTTGGTGATGGTA+TGG 0.559856 7_3:-39292728 Msa1103450:CDS
GTCAATGTGGCTGTCCAGAA+AGG 0.560723 7_3:+39291956 None:intergenic
TTCAGACCTTAAGCCCGTTG+CGG 0.562066 7_3:-39292042 Msa1103450:CDS
AACAACATGTTTACAGCCCA+AGG 0.562803 7_3:-39292125 Msa1103450:CDS
TGATTGGAGAATTTCCTTCG+TGG 0.566291 7_3:-39292960 Msa1103450:CDS
CAGGCAGTGGCTCTCCGTGT+CGG 0.568536 7_3:-39292332 Msa1103450:CDS
AATGTTTGGTTGAAGAACAC+AGG 0.570110 7_3:-39291750 Msa1103450:CDS
CTCTTGGCAGTACCAGCACC+TGG 0.572859 7_3:+39291852 None:intergenic
TGGATTAGAAGGTACATCTC+GGG 0.575964 7_3:-39293094 Msa1103450:CDS
GTCAATGGTACCTGTAATGA+CGG 0.576527 7_3:+39292220 None:intergenic
AATGTTGTGGTGGCTCAAGA+TGG 0.578269 7_3:-39292883 Msa1103450:CDS
TGCCTTTATGTCCCCAACCG+CGG 0.578312 7_3:+39292906 None:intergenic
AACAACAAGAAACACAGCTA+GGG 0.578472 7_3:+39293023 None:intergenic
GTTGGTGGCCCGAAAGCCCA+TGG 0.580256 7_3:-39292156 Msa1103450:CDS
GTTTCCAAAGATGAAGTCAA+TGG 0.582146 7_3:+39292205 None:intergenic
GGCAACGGTTGATGACAGAT+TGG 0.583641 7_3:+39292303 None:intergenic
ATGGATTAGAAGGTACATCT+CGG 0.583723 7_3:-39293095 Msa1103450:CDS
CCACATTGACCCAACAGGAT+GGG 0.583831 7_3:-39291943 Msa1103450:CDS
ACAGGGGTGGCCTTTACCGA+AGG 0.584133 7_3:-39291732 Msa1103450:CDS
GCCACATTGACCCAACAGGA+TGG 0.584474 7_3:-39291944 Msa1103450:CDS
ACGGGCTTAAGGTCTGAACT+TGG 0.586940 7_3:+39292047 None:intergenic
CCCAACAGGATGGGCTGAGT+GGG 0.587397 7_3:-39291934 Msa1103450:CDS
CTCTGGATATCAAGTCCTGA+AGG 0.591651 7_3:+39293055 None:intergenic
GAGTACATGAACAACGGACC+AGG 0.591905 7_3:-39291870 Msa1103450:CDS
ATGGATGCAACAATAATCAC+AGG 0.596549 7_3:-39292709 Msa1103450:CDS
TGTCATCAAAACTGCTGCAG+AGG 0.604794 7_3:-39291808 Msa1103450:CDS
CATAAAGGCAAATGTTGTGG+TGG 0.610350 7_3:-39292893 Msa1103450:CDS
AATGTGATGCTCGTTGGTGA+TGG 0.611460 7_3:-39292733 Msa1103450:CDS
AAAACAAATGTGATGCTCGT+TGG 0.616382 7_3:-39292739 Msa1103450:CDS
ATGTTTGGTTGAAGAACACA+GGG 0.616958 7_3:-39291749 Msa1103450:CDS
GAAAGGAGTCAATGCGGCAA+CGG 0.618090 7_3:+39292288 None:intergenic
ACAGTAGCGCAACTAATCCA+AGG 0.618888 7_3:-39291774 Msa1103450:CDS
CAGATTGGTCAGAGCCGACA+CGG 0.619345 7_3:+39292318 None:intergenic
CCCATCCTGTTGGGTCAATG+TGG 0.620356 7_3:+39291943 None:intergenic
TACCTGTAATGACGGAGTCA+CGG 0.621284 7_3:+39292228 None:intergenic
ATGTTGTGGTGGCTCAAGAT+GGG 0.625532 7_3:-39292882 Msa1103450:CDS
ACCCAACAGGATGGGCTGAG+TGG 0.626812 7_3:-39291935 Msa1103450:CDS
ATCCATCCAAGCAAGTTGCA+TGG 0.627349 7_3:+39293112 None:intergenic
GTGGCATCTGCACCTGACAA+TGG 0.627680 7_3:-39292829 Msa1103450:CDS
TGCGTAAAGAGTGTCTTGAA+AGG 0.633032 7_3:+39292271 None:intergenic
GGGTTACAAGCAAAGATAGG+AGG 0.637188 7_3:-39292939 Msa1103450:CDS
TGTGTTCCAGAAGTGCAAGT+TGG 0.646155 7_3:-39292174 Msa1103450:CDS
ACCTTCAAAAGTTCAACCGT+CGG 0.654500 7_3:-39292658 Msa1103450:intron
GGACATAAAGGCAAATGTTG+TGG 0.654505 7_3:-39292896 Msa1103450:CDS
TTATGATAGCAACTAAAGAG+AGG 0.658604 7_3:+39293541 None:intergenic
TCTTTGCTTGTAACCCACGA+AGG 0.680540 7_3:+39292946 None:intergenic
GCCCAAGGTCGAGAAGACCC+AGG 0.680834 7_3:-39292110 Msa1103450:CDS
GAAGACCCAGGTCAAAACAC+AGG 0.681710 7_3:-39292098 Msa1103450:CDS
GTACTGCCAAGAGAGTCACT+TGG 0.684987 7_3:-39291842 Msa1103450:CDS
TTGGTTGAAGAACACAGGGG+TGG 0.685455 7_3:-39291745 Msa1103450:CDS
GTGGTGGCTCAAGATGGGAG+CGG 0.689791 7_3:-39292877 Msa1103450:CDS
TACGGAGAGTACATGAACAA+CGG 0.694392 7_3:-39291876 Msa1103450:CDS
GAGCGGCAAGTTCAAGACTG+TGG 0.736964 7_3:-39292860 Msa1103450:CDS
TGTCTTGAAAGGAGTCAATG+CGG 0.756946 7_3:+39292282 None:intergenic
TGTTTGGTTGAAGAACACAG+GGG 0.875092 7_3:-39291748 Msa1103450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGGTAATTACAAAAAAA+GGG + chr7_3:39292710-39292729 None:intergenic 15.0%
!! AAATATACATGAAAATGAAA+TGG + chr7_3:39292727-39292746 None:intergenic 15.0%
!! AAATGGTAATTACAAAAAAA+GGG + chr7_3:39292710-39292729 None:intergenic 15.0%
!! AAATATACATGAAAATGAAA+TGG + chr7_3:39292727-39292746 None:intergenic 15.0%
!! TATGTTATCTATGTGAAAAA+GGG - chr7_3:39292535-39292554 Msa1103450:intron 20.0%
!! GAAATGGTAATTACAAAAAA+AGG + chr7_3:39292711-39292730 None:intergenic 20.0%
!!! ATTTAGATCTAAAACAAATG+AGG + chr7_3:39292829-39292848 None:intergenic 20.0%
!! AAGTTCATATTCTAATTGTA+TGG - chr7_3:39292858-39292877 Msa1103450:CDS 20.0%
!!! TACAAAACCAGATTTTTATT+TGG + chr7_3:39292910-39292929 None:intergenic 20.0%
!!! TTTCTGAAAACATTGTATTA+CGG - chr7_3:39293437-39293456 Msa1103450:CDS 20.0%
!! TATGTTATCTATGTGAAAAA+GGG - chr7_3:39292535-39292554 Msa1103450:intron 20.0%
!! GAAATGGTAATTACAAAAAA+AGG + chr7_3:39292711-39292730 None:intergenic 20.0%
!!! ATTTAGATCTAAAACAAATG+AGG + chr7_3:39292829-39292848 None:intergenic 20.0%
!! AAGTTCATATTCTAATTGTA+TGG - chr7_3:39292858-39292877 Msa1103450:CDS 20.0%
!!! TACAAAACCAGATTTTTATT+TGG + chr7_3:39292910-39292929 None:intergenic 20.0%
!!! TTTCTGAAAACATTGTATTA+CGG - chr7_3:39293437-39293456 Msa1103450:CDS 20.0%
!! AGGATTAACCAAAAAGTTTT+GGG + chr7_3:39291773-39291792 None:intergenic 25.0%
!!! AATTGGTCACAATTTTTTTG+AGG + chr7_3:39292337-39292356 None:intergenic 25.0%
! TCAATGTTTCATCAATGAAT+TGG + chr7_3:39292354-39292373 None:intergenic 25.0%
! TTCATTGATGAAACATTGAT+TGG - chr7_3:39292355-39292374 Msa1103450:CDS 25.0%
! GTATGTTATCTATGTGAAAA+AGG - chr7_3:39292534-39292553 Msa1103450:intron 25.0%
! TACAAAGAGAACATAGAAAT+TGG - chr7_3:39292562-39292581 Msa1103450:intron 25.0%
!! GCAACTTAAATTTTATCGAT+GGG - chr7_3:39292644-39292663 Msa1103450:intron 25.0%
!!! AGTATGAGCTTTTTTTGATA+GGG + chr7_3:39292804-39292823 None:intergenic 25.0%
!!! TTTGGTTAGTGTTGATATTT+GGG + chr7_3:39292892-39292911 None:intergenic 25.0%
!!! ATTTGGTTAGTGTTGATATT+TGG + chr7_3:39292893-39292912 None:intergenic 25.0%
! ACACTAACCAAATAAAAATC+TGG - chr7_3:39292900-39292919 Msa1103450:CDS 25.0%
!! AGGATTAACCAAAAAGTTTT+GGG + chr7_3:39291773-39291792 None:intergenic 25.0%
!!! AATTGGTCACAATTTTTTTG+AGG + chr7_3:39292337-39292356 None:intergenic 25.0%
! TCAATGTTTCATCAATGAAT+TGG + chr7_3:39292354-39292373 None:intergenic 25.0%
! TTCATTGATGAAACATTGAT+TGG - chr7_3:39292355-39292374 Msa1103450:CDS 25.0%
! GTATGTTATCTATGTGAAAA+AGG - chr7_3:39292534-39292553 Msa1103450:intron 25.0%
! TACAAAGAGAACATAGAAAT+TGG - chr7_3:39292562-39292581 Msa1103450:intron 25.0%
!! GCAACTTAAATTTTATCGAT+GGG - chr7_3:39292644-39292663 Msa1103450:intron 25.0%
!!! AGTATGAGCTTTTTTTGATA+GGG + chr7_3:39292804-39292823 None:intergenic 25.0%
!!! TTTGGTTAGTGTTGATATTT+GGG + chr7_3:39292892-39292911 None:intergenic 25.0%
!!! ATTTGGTTAGTGTTGATATT+TGG + chr7_3:39292893-39292912 None:intergenic 25.0%
! ACACTAACCAAATAAAAATC+TGG - chr7_3:39292900-39292919 Msa1103450:CDS 25.0%
!!! TAACCAAAAAGTTTTGGGAA+GGG + chr7_3:39291768-39291787 None:intergenic 30.0%
!!! TTAACCAAAAAGTTTTGGGA+AGG + chr7_3:39291769-39291788 None:intergenic 30.0%
! GAGGATTAACCAAAAAGTTT+TGG + chr7_3:39291774-39291793 None:intergenic 30.0%
TTATGATAGCAACTAAAGAG+AGG + chr7_3:39291793-39291812 None:intergenic 30.0%
CTTGAGATGAGTAGAAATAA+GGG + chr7_3:39291825-39291844 None:intergenic 30.0%
TCTTGAGATGAGTAGAAATA+AGG + chr7_3:39291826-39291845 None:intergenic 30.0%
AGCATGTTCACAGTAAAAAT+GGG + chr7_3:39291882-39291901 None:intergenic 30.0%
! TGTAGTAGACTTGGTTAATA+AGG + chr7_3:39291999-39292018 None:intergenic 30.0%
TCAAAGACATTTCTTCTCTA+TGG + chr7_3:39292075-39292094 None:intergenic 30.0%
!!! GAGCATCACATTTGTTTTTT+TGG + chr7_3:39292590-39292609 None:intergenic 30.0%
! GGCAACTTAAATTTTATCGA+TGG - chr7_3:39292643-39292662 Msa1103450:intron 30.0%
GGTAATTACAAAAAAAGGGA+AGG + chr7_3:39292706-39292725 None:intergenic 30.0%
!!! GTATGAGCTTTTTTTGATAG+GGG + chr7_3:39292803-39292822 None:intergenic 30.0%
!!! GAGTATGAGCTTTTTTTGAT+AGG + chr7_3:39292805-39292824 None:intergenic 30.0%
! AGACATTTGGTTCCAAAATA+CGG - chr7_3:39292959-39292978 Msa1103450:CDS 30.0%
!!! TGTAAACATGTTGTTTTGGT+TGG + chr7_3:39293201-39293220 None:intergenic 30.0%
AACTAATCCAAGGAAATGTT+TGG - chr7_3:39293567-39293586 Msa1103450:CDS 30.0%
!!! TAACCAAAAAGTTTTGGGAA+GGG + chr7_3:39291768-39291787 None:intergenic 30.0%
!!! TTAACCAAAAAGTTTTGGGA+AGG + chr7_3:39291769-39291788 None:intergenic 30.0%
! GAGGATTAACCAAAAAGTTT+TGG + chr7_3:39291774-39291793 None:intergenic 30.0%
TTATGATAGCAACTAAAGAG+AGG + chr7_3:39291793-39291812 None:intergenic 30.0%
CTTGAGATGAGTAGAAATAA+GGG + chr7_3:39291825-39291844 None:intergenic 30.0%
TCTTGAGATGAGTAGAAATA+AGG + chr7_3:39291826-39291845 None:intergenic 30.0%
AGCATGTTCACAGTAAAAAT+GGG + chr7_3:39291882-39291901 None:intergenic 30.0%
! TGTAGTAGACTTGGTTAATA+AGG + chr7_3:39291999-39292018 None:intergenic 30.0%
TCAAAGACATTTCTTCTCTA+TGG + chr7_3:39292075-39292094 None:intergenic 30.0%
!!! GAGCATCACATTTGTTTTTT+TGG + chr7_3:39292590-39292609 None:intergenic 30.0%
! GGCAACTTAAATTTTATCGA+TGG - chr7_3:39292643-39292662 Msa1103450:intron 30.0%
GGTAATTACAAAAAAAGGGA+AGG + chr7_3:39292706-39292725 None:intergenic 30.0%
!!! GTATGAGCTTTTTTTGATAG+GGG + chr7_3:39292803-39292822 None:intergenic 30.0%
!!! GAGTATGAGCTTTTTTTGAT+AGG + chr7_3:39292805-39292824 None:intergenic 30.0%
! AGACATTTGGTTCCAAAATA+CGG - chr7_3:39292959-39292978 Msa1103450:CDS 30.0%
!!! TGTAAACATGTTGTTTTGGT+TGG + chr7_3:39293201-39293220 None:intergenic 30.0%
AACTAATCCAAGGAAATGTT+TGG - chr7_3:39293567-39293586 Msa1103450:CDS 30.0%
! AATCCCTTCCCAAAACTTTT+TGG - chr7_3:39291762-39291781 Msa1103450:CDS 35.0%
GTGAGGTGAAAAAAGGAAAT+TGG + chr7_3:39291851-39291870 None:intergenic 35.0%
GCATGTTCACAGTAAAAATG+GGG + chr7_3:39291881-39291900 None:intergenic 35.0%
CAGCATGTTCACAGTAAAAA+TGG + chr7_3:39291883-39291902 None:intergenic 35.0%
ACAATAGTACATGCAAGCTT+TGG + chr7_3:39291976-39291995 None:intergenic 35.0%
TACACACATCCAAAAAACCA+TGG - chr7_3:39292015-39292034 Msa1103450:CDS 35.0%
CTTCTCTATGGCTGTTAATT+CGG + chr7_3:39292063-39292082 None:intergenic 35.0%
ACTTGTCGATGAACAGAATT+TGG - chr7_3:39292116-39292135 Msa1103450:CDS 35.0%
CTTGTCGATGAACAGAATTT+GGG - chr7_3:39292117-39292136 Msa1103450:CDS 35.0%
CATATCAAGATGCACATACA+TGG - chr7_3:39292176-39292195 Msa1103450:CDS 35.0%
!! ATGGATTAGAAGGTACATCT+CGG - chr7_3:39292236-39292255 Msa1103450:CDS 35.0%
CATTATGGAAAATGACCTTC+AGG - chr7_3:39292261-39292280 Msa1103450:CDS 35.0%
AACAACAAGAAACACAGCTA+GGG + chr7_3:39292311-39292330 None:intergenic 35.0%
AAACAACAAGAAACACAGCT+AGG + chr7_3:39292312-39292331 None:intergenic 35.0%
TACTTTGTCTTACCATTGTC+AGG + chr7_3:39292517-39292536 None:intergenic 35.0%
AAAACAAATGTGATGCTCGT+TGG - chr7_3:39292592-39292611 Msa1103450:intron 35.0%
ATGGATGCAACAATAATCAC+AGG - chr7_3:39292622-39292641 Msa1103450:intron 35.0%
!!! AAAATCTGGTTTTGTAGCTG+CGG - chr7_3:39292914-39292933 Msa1103450:CDS 35.0%
GGTTTATAGCACAAGACATT+TGG - chr7_3:39292946-39292965 Msa1103450:CDS 35.0%
GTTTCCAAAGATGAAGTCAA+TGG + chr7_3:39293129-39293148 None:intergenic 35.0%
TCCTGGAATATTTCTTCCAT+GGG + chr7_3:39293340-39293359 None:intergenic 35.0%
!! GTTTTGATGACATGATAACC+TGG + chr7_3:39293515-39293534 None:intergenic 35.0%
TCTTCAACCAAACATTTCCT+TGG + chr7_3:39293577-39293596 None:intergenic 35.0%
AATGTTTGGTTGAAGAACAC+AGG - chr7_3:39293581-39293600 Msa1103450:CDS 35.0%
ATGTTTGGTTGAAGAACACA+GGG - chr7_3:39293582-39293601 Msa1103450:CDS 35.0%
! AATCCCTTCCCAAAACTTTT+TGG - chr7_3:39291762-39291781 Msa1103450:CDS 35.0%
GTGAGGTGAAAAAAGGAAAT+TGG + chr7_3:39291851-39291870 None:intergenic 35.0%
GCATGTTCACAGTAAAAATG+GGG + chr7_3:39291881-39291900 None:intergenic 35.0%
CAGCATGTTCACAGTAAAAA+TGG + chr7_3:39291883-39291902 None:intergenic 35.0%
ACAATAGTACATGCAAGCTT+TGG + chr7_3:39291976-39291995 None:intergenic 35.0%
TACACACATCCAAAAAACCA+TGG - chr7_3:39292015-39292034 Msa1103450:CDS 35.0%
CTTCTCTATGGCTGTTAATT+CGG + chr7_3:39292063-39292082 None:intergenic 35.0%
ACTTGTCGATGAACAGAATT+TGG - chr7_3:39292116-39292135 Msa1103450:CDS 35.0%
CTTGTCGATGAACAGAATTT+GGG - chr7_3:39292117-39292136 Msa1103450:CDS 35.0%
CATATCAAGATGCACATACA+TGG - chr7_3:39292176-39292195 Msa1103450:CDS 35.0%
!! ATGGATTAGAAGGTACATCT+CGG - chr7_3:39292236-39292255 Msa1103450:CDS 35.0%
CATTATGGAAAATGACCTTC+AGG - chr7_3:39292261-39292280 Msa1103450:CDS 35.0%
AACAACAAGAAACACAGCTA+GGG + chr7_3:39292311-39292330 None:intergenic 35.0%
AAACAACAAGAAACACAGCT+AGG + chr7_3:39292312-39292331 None:intergenic 35.0%
TACTTTGTCTTACCATTGTC+AGG + chr7_3:39292517-39292536 None:intergenic 35.0%
AAAACAAATGTGATGCTCGT+TGG - chr7_3:39292592-39292611 Msa1103450:intron 35.0%
ATGGATGCAACAATAATCAC+AGG - chr7_3:39292622-39292641 Msa1103450:intron 35.0%
!!! AAAATCTGGTTTTGTAGCTG+CGG - chr7_3:39292914-39292933 Msa1103450:CDS 35.0%
GGTTTATAGCACAAGACATT+TGG - chr7_3:39292946-39292965 Msa1103450:CDS 35.0%
GTTTCCAAAGATGAAGTCAA+TGG + chr7_3:39293129-39293148 None:intergenic 35.0%
TCCTGGAATATTTCTTCCAT+GGG + chr7_3:39293340-39293359 None:intergenic 35.0%
!! GTTTTGATGACATGATAACC+TGG + chr7_3:39293515-39293534 None:intergenic 35.0%
TCTTCAACCAAACATTTCCT+TGG + chr7_3:39293577-39293596 None:intergenic 35.0%
AATGTTTGGTTGAAGAACAC+AGG - chr7_3:39293581-39293600 Msa1103450:CDS 35.0%
ATGTTTGGTTGAAGAACACA+GGG - chr7_3:39293582-39293601 Msa1103450:CDS 35.0%
!!! GTTTTGGGAAGGGATTTTCT+AGG + chr7_3:39291758-39291777 None:intergenic 40.0%
! CTTTTGTGGTGACCAAAGTT+GGG + chr7_3:39291952-39291971 None:intergenic 40.0%
! TCTTTTGTGGTGACCAAAGT+TGG + chr7_3:39291953-39291972 None:intergenic 40.0%
!! ATGCAAGCTTTGGTCTTTTG+TGG + chr7_3:39291966-39291985 None:intergenic 40.0%
TTGGATGTGTGTAGTAGACT+TGG + chr7_3:39292008-39292027 None:intergenic 40.0%
!!! TAGCTGTGTCCATGGTTTTT+TGG + chr7_3:39292027-39292046 None:intergenic 40.0%
GATAACATTAGCTGTGTCCA+TGG + chr7_3:39292035-39292054 None:intergenic 40.0%
GAGTGACTGTGAAGAACTAA+TGG - chr7_3:39292093-39292112 Msa1103450:CDS 40.0%
!! ACTTGCTTGGATGGATTAGA+AGG - chr7_3:39292226-39292245 Msa1103450:CDS 40.0%
! TGGATTAGAAGGTACATCTC+GGG - chr7_3:39292237-39292256 Msa1103450:CDS 40.0%
TGATTGGAGAATTTCCTTCG+TGG - chr7_3:39292371-39292390 Msa1103450:CDS 40.0%
GATTGGAGAATTTCCTTCGT+GGG - chr7_3:39292372-39292391 Msa1103450:CDS 40.0%
! AAGCAAAGATAGGAGGCTTT+TGG - chr7_3:39292399-39292418 Msa1103450:CDS 40.0%
GGACATAAAGGCAAATGTTG+TGG - chr7_3:39292435-39292454 Msa1103450:intron 40.0%
CATAAAGGCAAATGTTGTGG+TGG - chr7_3:39292438-39292457 Msa1103450:intron 40.0%
ACCTTCAAAAGTTCAACCGT+CGG - chr7_3:39292673-39292692 Msa1103450:CDS 40.0%
! ATTTGGTTCCAAAATACGGC+AGG - chr7_3:39292963-39292982 Msa1103450:CDS 40.0%
TGTCTTGAAAGGAGTCAATG+CGG + chr7_3:39293052-39293071 None:intergenic 40.0%
!! TGCGTAAAGAGTGTCTTGAA+AGG + chr7_3:39293063-39293082 None:intergenic 40.0%
GTCACGGTAAAATTGCCTAT+TGG + chr7_3:39293090-39293109 None:intergenic 40.0%
GTCAATGGTACCTGTAATGA+CGG + chr7_3:39293114-39293133 None:intergenic 40.0%
!! GGTACCATTGACTTCATCTT+TGG - chr7_3:39293122-39293141 Msa1103450:CDS 40.0%
!!! ATGTTGTTTTGGTTGGCCAT+GGG + chr7_3:39293194-39293213 None:intergenic 40.0%
!! GGGCTGTAAACATGTTGTTT+TGG + chr7_3:39293205-39293224 None:intergenic 40.0%
AACAACATGTTTACAGCCCA+AGG - chr7_3:39293206-39293225 Msa1103450:CDS 40.0%
!!! AAGTTCCTGTGTTTTGACCT+GGG + chr7_3:39293241-39293260 None:intergenic 40.0%
!! TAAGGTCTGAACTTGGTGTT+AGG + chr7_3:39293280-39293299 None:intergenic 40.0%
GTCCTGGAATATTTCTTCCA+TGG + chr7_3:39293341-39293360 None:intergenic 40.0%
TGTTGTGATGCAATCCTTTC+TGG - chr7_3:39293361-39293380 Msa1103450:CDS 40.0%
! TACGGAGAGTACATGAACAA+CGG - chr7_3:39293455-39293474 Msa1103450:CDS 40.0%
TGTTTGGTTGAAGAACACAG+GGG - chr7_3:39293583-39293602 Msa1103450:CDS 40.0%
!!! GTTTTGGGAAGGGATTTTCT+AGG + chr7_3:39291758-39291777 None:intergenic 40.0%
! CTTTTGTGGTGACCAAAGTT+GGG + chr7_3:39291952-39291971 None:intergenic 40.0%
! TCTTTTGTGGTGACCAAAGT+TGG + chr7_3:39291953-39291972 None:intergenic 40.0%
!! ATGCAAGCTTTGGTCTTTTG+TGG + chr7_3:39291966-39291985 None:intergenic 40.0%
TTGGATGTGTGTAGTAGACT+TGG + chr7_3:39292008-39292027 None:intergenic 40.0%
!!! TAGCTGTGTCCATGGTTTTT+TGG + chr7_3:39292027-39292046 None:intergenic 40.0%
GATAACATTAGCTGTGTCCA+TGG + chr7_3:39292035-39292054 None:intergenic 40.0%
GAGTGACTGTGAAGAACTAA+TGG - chr7_3:39292093-39292112 Msa1103450:CDS 40.0%
!! ACTTGCTTGGATGGATTAGA+AGG - chr7_3:39292226-39292245 Msa1103450:CDS 40.0%
! TGGATTAGAAGGTACATCTC+GGG - chr7_3:39292237-39292256 Msa1103450:CDS 40.0%
TGATTGGAGAATTTCCTTCG+TGG - chr7_3:39292371-39292390 Msa1103450:CDS 40.0%
GATTGGAGAATTTCCTTCGT+GGG - chr7_3:39292372-39292391 Msa1103450:CDS 40.0%
! AAGCAAAGATAGGAGGCTTT+TGG - chr7_3:39292399-39292418 Msa1103450:CDS 40.0%
GGACATAAAGGCAAATGTTG+TGG - chr7_3:39292435-39292454 Msa1103450:intron 40.0%
CATAAAGGCAAATGTTGTGG+TGG - chr7_3:39292438-39292457 Msa1103450:intron 40.0%
ACCTTCAAAAGTTCAACCGT+CGG - chr7_3:39292673-39292692 Msa1103450:CDS 40.0%
! ATTTGGTTCCAAAATACGGC+AGG - chr7_3:39292963-39292982 Msa1103450:CDS 40.0%
TGTCTTGAAAGGAGTCAATG+CGG + chr7_3:39293052-39293071 None:intergenic 40.0%
!! TGCGTAAAGAGTGTCTTGAA+AGG + chr7_3:39293063-39293082 None:intergenic 40.0%
GTCACGGTAAAATTGCCTAT+TGG + chr7_3:39293090-39293109 None:intergenic 40.0%
GTCAATGGTACCTGTAATGA+CGG + chr7_3:39293114-39293133 None:intergenic 40.0%
!! GGTACCATTGACTTCATCTT+TGG - chr7_3:39293122-39293141 Msa1103450:CDS 40.0%
!!! ATGTTGTTTTGGTTGGCCAT+GGG + chr7_3:39293194-39293213 None:intergenic 40.0%
!! GGGCTGTAAACATGTTGTTT+TGG + chr7_3:39293205-39293224 None:intergenic 40.0%
AACAACATGTTTACAGCCCA+AGG - chr7_3:39293206-39293225 Msa1103450:CDS 40.0%
!!! AAGTTCCTGTGTTTTGACCT+GGG + chr7_3:39293241-39293260 None:intergenic 40.0%
!! TAAGGTCTGAACTTGGTGTT+AGG + chr7_3:39293280-39293299 None:intergenic 40.0%
GTCCTGGAATATTTCTTCCA+TGG + chr7_3:39293341-39293360 None:intergenic 40.0%
TGTTGTGATGCAATCCTTTC+TGG - chr7_3:39293361-39293380 Msa1103450:CDS 40.0%
! TACGGAGAGTACATGAACAA+CGG - chr7_3:39293455-39293474 Msa1103450:CDS 40.0%
TGTTTGGTTGAAGAACACAG+GGG - chr7_3:39293583-39293602 Msa1103450:CDS 40.0%
AGCTGTGGTGAGGTGAAAAA+AGG + chr7_3:39291858-39291877 None:intergenic 45.0%
ACAGTAAAAATGGGGAGCTG+TGG + chr7_3:39291873-39291892 None:intergenic 45.0%
AGTATCTCACGTCCCAACTT+TGG - chr7_3:39291937-39291956 Msa1103450:CDS 45.0%
! AACCATGCAACTTGCTTGGA+TGG - chr7_3:39292217-39292236 Msa1103450:CDS 45.0%
ATCCATCCAAGCAAGTTGCA+TGG + chr7_3:39292222-39292241 None:intergenic 45.0%
AGGTACATCTCGGGTCATTA+TGG - chr7_3:39292246-39292265 Msa1103450:CDS 45.0%
CTCTGGATATCAAGTCCTGA+AGG + chr7_3:39292279-39292298 None:intergenic 45.0%
TCTTTGCTTGTAACCCACGA+AGG + chr7_3:39292388-39292407 None:intergenic 45.0%
! CGTGGGTTACAAGCAAAGAT+AGG - chr7_3:39292389-39292408 Msa1103450:CDS 45.0%
GGGTTACAAGCAAAGATAGG+AGG - chr7_3:39292392-39292411 Msa1103450:CDS 45.0%
AATGTTGTGGTGGCTCAAGA+TGG - chr7_3:39292448-39292467 Msa1103450:intron 45.0%
ATGTTGTGGTGGCTCAAGAT+GGG - chr7_3:39292449-39292468 Msa1103450:intron 45.0%
! AATGTGATGCTCGTTGGTGA+TGG - chr7_3:39292598-39292617 Msa1103450:intron 45.0%
! ACCGACGGTTGAACTTTTGA+AGG + chr7_3:39292677-39292696 None:intergenic 45.0%
CAAAAGTTCAACCGTCGGTA+TGG - chr7_3:39292678-39292697 Msa1103450:CDS 45.0%
CTCTTTACGCACACTCCAAT+AGG - chr7_3:39293072-39293091 Msa1103450:CDS 45.0%
! TACCTGTAATGACGGAGTCA+CGG + chr7_3:39293106-39293125 None:intergenic 45.0%
! TGTGTTCCAGAAGTGCAAGT+TGG - chr7_3:39293157-39293176 Msa1103450:CDS 45.0%
!!! CATGTTGTTTTGGTTGGCCA+TGG + chr7_3:39293195-39293214 None:intergenic 45.0%
!!! GAAGTTCCTGTGTTTTGACC+TGG + chr7_3:39293242-39293261 None:intergenic 45.0%
GGCTCCATCAAAACATTCCT+GGG - chr7_3:39293311-39293330 Msa1103450:CDS 45.0%
GCCCATGGAAGAAATATTCC+AGG - chr7_3:39293336-39293355 Msa1103450:CDS 45.0%
TGTCATCAAAACTGCTGCAG+AGG - chr7_3:39293523-39293542 Msa1103450:CDS 45.0%
ACAGTAGCGCAACTAATCCA+AGG - chr7_3:39293557-39293576 Msa1103450:CDS 45.0%
AGCTGTGGTGAGGTGAAAAA+AGG + chr7_3:39291858-39291877 None:intergenic 45.0%
ACAGTAAAAATGGGGAGCTG+TGG + chr7_3:39291873-39291892 None:intergenic 45.0%
AGTATCTCACGTCCCAACTT+TGG - chr7_3:39291937-39291956 Msa1103450:CDS 45.0%
! AACCATGCAACTTGCTTGGA+TGG - chr7_3:39292217-39292236 Msa1103450:CDS 45.0%
ATCCATCCAAGCAAGTTGCA+TGG + chr7_3:39292222-39292241 None:intergenic 45.0%
AGGTACATCTCGGGTCATTA+TGG - chr7_3:39292246-39292265 Msa1103450:CDS 45.0%
CTCTGGATATCAAGTCCTGA+AGG + chr7_3:39292279-39292298 None:intergenic 45.0%
TCTTTGCTTGTAACCCACGA+AGG + chr7_3:39292388-39292407 None:intergenic 45.0%
! CGTGGGTTACAAGCAAAGAT+AGG - chr7_3:39292389-39292408 Msa1103450:CDS 45.0%
GGGTTACAAGCAAAGATAGG+AGG - chr7_3:39292392-39292411 Msa1103450:CDS 45.0%
AATGTTGTGGTGGCTCAAGA+TGG - chr7_3:39292448-39292467 Msa1103450:intron 45.0%
ATGTTGTGGTGGCTCAAGAT+GGG - chr7_3:39292449-39292468 Msa1103450:intron 45.0%
! AATGTGATGCTCGTTGGTGA+TGG - chr7_3:39292598-39292617 Msa1103450:intron 45.0%
! ACCGACGGTTGAACTTTTGA+AGG + chr7_3:39292677-39292696 None:intergenic 45.0%
CAAAAGTTCAACCGTCGGTA+TGG - chr7_3:39292678-39292697 Msa1103450:CDS 45.0%
CTCTTTACGCACACTCCAAT+AGG - chr7_3:39293072-39293091 Msa1103450:CDS 45.0%
! TACCTGTAATGACGGAGTCA+CGG + chr7_3:39293106-39293125 None:intergenic 45.0%
! TGTGTTCCAGAAGTGCAAGT+TGG - chr7_3:39293157-39293176 Msa1103450:CDS 45.0%
!!! CATGTTGTTTTGGTTGGCCA+TGG + chr7_3:39293195-39293214 None:intergenic 45.0%
!!! GAAGTTCCTGTGTTTTGACC+TGG + chr7_3:39293242-39293261 None:intergenic 45.0%
GGCTCCATCAAAACATTCCT+GGG - chr7_3:39293311-39293330 Msa1103450:CDS 45.0%
GCCCATGGAAGAAATATTCC+AGG - chr7_3:39293336-39293355 Msa1103450:CDS 45.0%
TGTCATCAAAACTGCTGCAG+AGG - chr7_3:39293523-39293542 Msa1103450:CDS 45.0%
ACAGTAGCGCAACTAATCCA+AGG - chr7_3:39293557-39293576 Msa1103450:CDS 45.0%
AAAAATGGGGAGCTGTGGTG+AGG + chr7_3:39291868-39291887 None:intergenic 50.0%
! CACGAACCATGCAACTTGCT+TGG - chr7_3:39292213-39292232 Msa1103450:CDS 50.0%
! AGCTAGGGAAGATCTAGCTC+TGG + chr7_3:39292296-39292315 None:intergenic 50.0%
CAAGTTCAAGACTGTGGCTG+AGG - chr7_3:39292477-39292496 Msa1103450:intron 50.0%
!! GATGCTCGTTGGTGATGGTA+TGG - chr7_3:39292603-39292622 Msa1103450:intron 50.0%
AAGGGAAGGATCCATACCGA+CGG + chr7_3:39292692-39292711 None:intergenic 50.0%
!!! TCTGGTTTTGTAGCTGCGGT+TGG - chr7_3:39292918-39292937 Msa1103450:CDS 50.0%
!!! CTGGTTTTGTAGCTGCGGTT+GGG - chr7_3:39292919-39292938 Msa1103450:CDS 50.0%
!!! TGGTTTTGTAGCTGCGGTTG+GGG - chr7_3:39292920-39292939 Msa1103450:CDS 50.0%
!! GGCAACGGTTGATGACAGAT+TGG + chr7_3:39293031-39293050 None:intergenic 50.0%
GAAAGGAGTCAATGCGGCAA+CGG + chr7_3:39293046-39293065 None:intergenic 50.0%
TACCGTGACTCCGTCATTAC+AGG - chr7_3:39293101-39293120 Msa1103450:CDS 50.0%
! GTTCCAGAAGTGCAAGTTGG+TGG - chr7_3:39293160-39293179 Msa1103450:CDS 50.0%
! TTTGGTTGGCCATGGGCTTT+CGG + chr7_3:39293187-39293206 None:intergenic 50.0%
GAAGACCCAGGTCAAAACAC+AGG - chr7_3:39293233-39293252 Msa1103450:CDS 50.0%
ACGGGCTTAAGGTCTGAACT+TGG + chr7_3:39293287-39293306 None:intergenic 50.0%
TTCAGACCTTAAGCCCGTTG+CGG - chr7_3:39293289-39293308 Msa1103450:CDS 50.0%
!!! TGTTTTGATGGAGCCCGCAA+CGG + chr7_3:39293306-39293325 None:intergenic 50.0%
GGGCTCCATCAAAACATTCC+TGG - chr7_3:39293310-39293329 Msa1103450:CDS 50.0%
!! GCGACCCAGGAATGTTTTGA+TGG + chr7_3:39293318-39293337 None:intergenic 50.0%
GGATTGCATCACAACAGTCC+TGG + chr7_3:39293357-39293376 None:intergenic 50.0%
GTCAATGTGGCTGTCCAGAA+AGG + chr7_3:39293378-39293397 None:intergenic 50.0%
CCACATTGACCCAACAGGAT+GGG - chr7_3:39293388-39293407 Msa1103450:CDS 50.0%
GAGTACATGAACAACGGACC+AGG - chr7_3:39293461-39293480 Msa1103450:CDS 50.0%
GTACTGCCAAGAGAGTCACT+TGG - chr7_3:39293489-39293508 Msa1103450:CDS 50.0%
TTGGTTGAAGAACACAGGGG+TGG - chr7_3:39293586-39293605 Msa1103450:CDS 50.0%
AAAAATGGGGAGCTGTGGTG+AGG + chr7_3:39291868-39291887 None:intergenic 50.0%
! CACGAACCATGCAACTTGCT+TGG - chr7_3:39292213-39292232 Msa1103450:CDS 50.0%
! AGCTAGGGAAGATCTAGCTC+TGG + chr7_3:39292296-39292315 None:intergenic 50.0%
CAAGTTCAAGACTGTGGCTG+AGG - chr7_3:39292477-39292496 Msa1103450:intron 50.0%
!! GATGCTCGTTGGTGATGGTA+TGG - chr7_3:39292603-39292622 Msa1103450:intron 50.0%
AAGGGAAGGATCCATACCGA+CGG + chr7_3:39292692-39292711 None:intergenic 50.0%
!!! TCTGGTTTTGTAGCTGCGGT+TGG - chr7_3:39292918-39292937 Msa1103450:CDS 50.0%
!!! CTGGTTTTGTAGCTGCGGTT+GGG - chr7_3:39292919-39292938 Msa1103450:CDS 50.0%
!!! TGGTTTTGTAGCTGCGGTTG+GGG - chr7_3:39292920-39292939 Msa1103450:CDS 50.0%
!! GGCAACGGTTGATGACAGAT+TGG + chr7_3:39293031-39293050 None:intergenic 50.0%
GAAAGGAGTCAATGCGGCAA+CGG + chr7_3:39293046-39293065 None:intergenic 50.0%
TACCGTGACTCCGTCATTAC+AGG - chr7_3:39293101-39293120 Msa1103450:CDS 50.0%
! GTTCCAGAAGTGCAAGTTGG+TGG - chr7_3:39293160-39293179 Msa1103450:CDS 50.0%
! TTTGGTTGGCCATGGGCTTT+CGG + chr7_3:39293187-39293206 None:intergenic 50.0%
GAAGACCCAGGTCAAAACAC+AGG - chr7_3:39293233-39293252 Msa1103450:CDS 50.0%
ACGGGCTTAAGGTCTGAACT+TGG + chr7_3:39293287-39293306 None:intergenic 50.0%
TTCAGACCTTAAGCCCGTTG+CGG - chr7_3:39293289-39293308 Msa1103450:CDS 50.0%
!!! TGTTTTGATGGAGCCCGCAA+CGG + chr7_3:39293306-39293325 None:intergenic 50.0%
GGGCTCCATCAAAACATTCC+TGG - chr7_3:39293310-39293329 Msa1103450:CDS 50.0%
!! GCGACCCAGGAATGTTTTGA+TGG + chr7_3:39293318-39293337 None:intergenic 50.0%
GGATTGCATCACAACAGTCC+TGG + chr7_3:39293357-39293376 None:intergenic 50.0%
GTCAATGTGGCTGTCCAGAA+AGG + chr7_3:39293378-39293397 None:intergenic 50.0%
CCACATTGACCCAACAGGAT+GGG - chr7_3:39293388-39293407 Msa1103450:CDS 50.0%
GAGTACATGAACAACGGACC+AGG - chr7_3:39293461-39293480 Msa1103450:CDS 50.0%
GTACTGCCAAGAGAGTCACT+TGG - chr7_3:39293489-39293508 Msa1103450:CDS 50.0%
TTGGTTGAAGAACACAGGGG+TGG - chr7_3:39293586-39293605 Msa1103450:CDS 50.0%
!!! TAGGAGGCTTTTGGAGTCCG+CGG - chr7_3:39292408-39292427 Msa1103450:intron 55.0%
TGCCTTTATGTCCCCAACCG+CGG + chr7_3:39292428-39292447 None:intergenic 55.0%
GAGCGGCAAGTTCAAGACTG+TGG - chr7_3:39292471-39292490 Msa1103450:intron 55.0%
GTGGCATCTGCACCTGACAA+TGG - chr7_3:39292502-39292521 Msa1103450:intron 55.0%
TTTGTAGCTGCGGTTGGGGA+TGG - chr7_3:39292924-39292943 Msa1103450:CDS 55.0%
TTGTAGCTGCGGTTGGGGAT+GGG - chr7_3:39292925-39292944 Msa1103450:CDS 55.0%
! CAGATTGGTCAGAGCCGACA+CGG + chr7_3:39293016-39293035 None:intergenic 55.0%
! TTGGTTGGCCATGGGCTTTC+GGG + chr7_3:39293186-39293205 None:intergenic 55.0%
ACCTGGGTCTTCTCGACCTT+GGG + chr7_3:39293225-39293244 None:intergenic 55.0%
TCAGACCTTAAGCCCGTTGC+GGG - chr7_3:39293290-39293309 Msa1103450:CDS 55.0%
!! GTTTTGATGGAGCCCGCAAC+GGG + chr7_3:39293305-39293324 None:intergenic 55.0%
AAACATTCCTGGGTCGCCCA+TGG - chr7_3:39293321-39293340 Msa1103450:CDS 55.0%
ATTTCTTCCATGGGCGACCC+AGG + chr7_3:39293331-39293350 None:intergenic 55.0%
GACAGCCACATTGACCCAAC+AGG - chr7_3:39293383-39293402 Msa1103450:CDS 55.0%
GCCACATTGACCCAACAGGA+TGG - chr7_3:39293387-39293406 Msa1103450:CDS 55.0%
CCCATCCTGTTGGGTCAATG+TGG + chr7_3:39293391-39293410 None:intergenic 55.0%
TGAGTGGGATGCTGCGAGTA+AGG - chr7_3:39293412-39293431 Msa1103450:CDS 55.0%
ATGAACAACGGACCAGGTGC+TGG - chr7_3:39293467-39293486 Msa1103450:CDS 55.0%
ACCTGGCCAAGTGACTCTCT+TGG + chr7_3:39293498-39293517 None:intergenic 55.0%
!!! TAGGAGGCTTTTGGAGTCCG+CGG - chr7_3:39292408-39292427 Msa1103450:intron 55.0%
TGCCTTTATGTCCCCAACCG+CGG + chr7_3:39292428-39292447 None:intergenic 55.0%
GAGCGGCAAGTTCAAGACTG+TGG - chr7_3:39292471-39292490 Msa1103450:intron 55.0%
GTGGCATCTGCACCTGACAA+TGG - chr7_3:39292502-39292521 Msa1103450:intron 55.0%
TTTGTAGCTGCGGTTGGGGA+TGG - chr7_3:39292924-39292943 Msa1103450:CDS 55.0%
TTGTAGCTGCGGTTGGGGAT+GGG - chr7_3:39292925-39292944 Msa1103450:CDS 55.0%
! CAGATTGGTCAGAGCCGACA+CGG + chr7_3:39293016-39293035 None:intergenic 55.0%
! TTGGTTGGCCATGGGCTTTC+GGG + chr7_3:39293186-39293205 None:intergenic 55.0%
ACCTGGGTCTTCTCGACCTT+GGG + chr7_3:39293225-39293244 None:intergenic 55.0%
TCAGACCTTAAGCCCGTTGC+GGG - chr7_3:39293290-39293309 Msa1103450:CDS 55.0%
!! GTTTTGATGGAGCCCGCAAC+GGG + chr7_3:39293305-39293324 None:intergenic 55.0%
AAACATTCCTGGGTCGCCCA+TGG - chr7_3:39293321-39293340 Msa1103450:CDS 55.0%
ATTTCTTCCATGGGCGACCC+AGG + chr7_3:39293331-39293350 None:intergenic 55.0%
GACAGCCACATTGACCCAAC+AGG - chr7_3:39293383-39293402 Msa1103450:CDS 55.0%
GCCACATTGACCCAACAGGA+TGG - chr7_3:39293387-39293406 Msa1103450:CDS 55.0%
CCCATCCTGTTGGGTCAATG+TGG + chr7_3:39293391-39293410 None:intergenic 55.0%
TGAGTGGGATGCTGCGAGTA+AGG - chr7_3:39293412-39293431 Msa1103450:CDS 55.0%
ATGAACAACGGACCAGGTGC+TGG - chr7_3:39293467-39293486 Msa1103450:CDS 55.0%
ACCTGGCCAAGTGACTCTCT+TGG + chr7_3:39293498-39293517 None:intergenic 55.0%
!!! AGGCTTTTGGAGTCCGCGGT+TGG - chr7_3:39292412-39292431 Msa1103450:intron 60.0%
!!! GGCTTTTGGAGTCCGCGGTT+GGG - chr7_3:39292413-39292432 Msa1103450:intron 60.0%
!!! GCTTTTGGAGTCCGCGGTTG+GGG - chr7_3:39292414-39292433 Msa1103450:intron 60.0%
GTCCGCGGTTGGGGACATAA+AGG - chr7_3:39292423-39292442 Msa1103450:intron 60.0%
GTGGTGGCTCAAGATGGGAG+CGG - chr7_3:39292454-39292473 Msa1103450:intron 60.0%
CAAGACTGTGGCTGAGGCTG+TGG - chr7_3:39292483-39292502 Msa1103450:intron 60.0%
! TGGCTGCGCCTGCCGTATTT+TGG + chr7_3:39292974-39292993 None:intergenic 60.0%
GGGCCACCAACTTGCACTTC+TGG + chr7_3:39293166-39293185 None:intergenic 60.0%
GACCTGGGTCTTCTCGACCT+TGG + chr7_3:39293226-39293245 None:intergenic 60.0%
!! ACCCAACAGGATGGGCTGAG+TGG - chr7_3:39293396-39293415 Msa1103450:CDS 60.0%
CCCACTCAGCCCATCCTGTT+GGG + chr7_3:39293400-39293419 None:intergenic 60.0%
!! CCCAACAGGATGGGCTGAGT+GGG - chr7_3:39293397-39293416 Msa1103450:CDS 60.0%
TCCCACTCAGCCCATCCTGT+TGG + chr7_3:39293401-39293420 None:intergenic 60.0%
CTCTTGGCAGTACCAGCACC+TGG + chr7_3:39293482-39293501 None:intergenic 60.0%
GCCAAGAGAGTCACTTGGCC+AGG - chr7_3:39293494-39293513 Msa1103450:CDS 60.0%
ACAGGGGTGGCCTTTACCGA+AGG - chr7_3:39293599-39293618 Msa1103450:CDS 60.0%
!!! AGGCTTTTGGAGTCCGCGGT+TGG - chr7_3:39292412-39292431 Msa1103450:intron 60.0%
!!! GGCTTTTGGAGTCCGCGGTT+GGG - chr7_3:39292413-39292432 Msa1103450:intron 60.0%
!!! GCTTTTGGAGTCCGCGGTTG+GGG - chr7_3:39292414-39292433 Msa1103450:intron 60.0%
GTCCGCGGTTGGGGACATAA+AGG - chr7_3:39292423-39292442 Msa1103450:intron 60.0%
GTGGTGGCTCAAGATGGGAG+CGG - chr7_3:39292454-39292473 Msa1103450:intron 60.0%
CAAGACTGTGGCTGAGGCTG+TGG - chr7_3:39292483-39292502 Msa1103450:intron 60.0%
! TGGCTGCGCCTGCCGTATTT+TGG + chr7_3:39292974-39292993 None:intergenic 60.0%
GGGCCACCAACTTGCACTTC+TGG + chr7_3:39293166-39293185 None:intergenic 60.0%
GACCTGGGTCTTCTCGACCT+TGG + chr7_3:39293226-39293245 None:intergenic 60.0%
!! ACCCAACAGGATGGGCTGAG+TGG - chr7_3:39293396-39293415 Msa1103450:CDS 60.0%
CCCACTCAGCCCATCCTGTT+GGG + chr7_3:39293400-39293419 None:intergenic 60.0%
!! CCCAACAGGATGGGCTGAGT+GGG - chr7_3:39293397-39293416 Msa1103450:CDS 60.0%
TCCCACTCAGCCCATCCTGT+TGG + chr7_3:39293401-39293420 None:intergenic 60.0%
CTCTTGGCAGTACCAGCACC+TGG + chr7_3:39293482-39293501 None:intergenic 60.0%
GCCAAGAGAGTCACTTGGCC+AGG - chr7_3:39293494-39293513 Msa1103450:CDS 60.0%
ACAGGGGTGGCCTTTACCGA+AGG - chr7_3:39293599-39293618 Msa1103450:CDS 60.0%
GAGAGCCACTGCCTGGTGCT+TGG + chr7_3:39292994-39293013 None:intergenic 65.0%
CAGGCAGTGGCTCTCCGTGT+CGG - chr7_3:39292999-39293018 Msa1103450:CDS 65.0%
!! GTTGGTGGCCCGAAAGCCCA+TGG - chr7_3:39293175-39293194 Msa1103450:CDS 65.0%
GCCCAAGGTCGAGAAGACCC+AGG - chr7_3:39293221-39293240 Msa1103450:CDS 65.0%
! TGGAGCCCGCAACGGGCTTA+AGG + chr7_3:39293298-39293317 None:intergenic 65.0%
GAGAGCCACTGCCTGGTGCT+TGG + chr7_3:39292994-39293013 None:intergenic 65.0%
CAGGCAGTGGCTCTCCGTGT+CGG - chr7_3:39292999-39293018 Msa1103450:CDS 65.0%
!! GTTGGTGGCCCGAAAGCCCA+TGG - chr7_3:39293175-39293194 Msa1103450:CDS 65.0%
GCCCAAGGTCGAGAAGACCC+AGG - chr7_3:39293221-39293240 Msa1103450:CDS 65.0%
! TGGAGCCCGCAACGGGCTTA+AGG + chr7_3:39293298-39293317 None:intergenic 65.0%
CGCAGCCAAGCACCAGGCAG+TGG - chr7_3:39292986-39293005 Msa1103450:CDS 70.0%
CGACACGGAGAGCCACTGCC+TGG + chr7_3:39293001-39293020 None:intergenic 70.0%
CGCAGCCAAGCACCAGGCAG+TGG - chr7_3:39292986-39293005 Msa1103450:CDS 70.0%
CGACACGGAGAGCCACTGCC+TGG + chr7_3:39293001-39293020 None:intergenic 70.0%
GGCAGGCGCAGCCAAGCACC+AGG - chr7_3:39292980-39292999 Msa1103450:CDS 75.0%
GGCAGGCGCAGCCAAGCACC+AGG - chr7_3:39292980-39292999 Msa1103450:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 39291725 39293628 39291725 ID=Msa1103450;Name=Msa1103450
chr7_3 mRNA 39291725 39293628 39291725 ID=Msa1103450-mRNA-1;Parent=Msa1103450;Name=Msa1103450-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|1|0|1|1|1|2|0|555
chr7_3 exon 39292659 39293628 39292659 ID=Msa1103450-mRNA-1:exon:7994;Parent=Msa1103450-mRNA-1
chr7_3 exon 39291725 39292422 39291725 ID=Msa1103450-mRNA-1:exon:7993;Parent=Msa1103450-mRNA-1
chr7_3 CDS 39292659 39293628 39292659 ID=Msa1103450-mRNA-1:cds;Parent=Msa1103450-mRNA-1
chr7_3 CDS 39291725 39292422 39291725 ID=Msa1103450-mRNA-1:cds;Parent=Msa1103450-mRNA-1
Gene Sequence

>Msa1103450

ATGGCTAGTCAACAATCTTTGCTAGACAATCCTAGAAAATCCCTTCCCAAAACTTTTTGGTTAATCCTCTCTTTAGTTGCTATCATAAGCTCATCAGCCCTTATTTCTACTCATCTCAAGAAACCAATTTCCTTTTTTCACCTCACCACAGCTCCCCATTTTTACTGTGAACATGCTGTCGATGCAAAATCGTGTTTAGCTCATGTATCAGAAGTATCTCACGTCCCAACTTTGGTCACCACAAAAGACCAAAGCTTGCATGTACTATTGTCCTTATTAACCAAGTCTACTACACACATCCAAAAAACCATGGACACAGCTAATGTTATCAAACGCCGAATTAACAGCCATAGAGAAGAAATGTCTTTGAGTGACTGTGAAGAACTAATGGACTTGTCGATGAACAGAATTTGGGACTCGATGTTAAAGCTAACAAAAAATAATATTGACTCATATCAAGATGCACATACATGGCTAAGCAGTGTGCTCACGAACCATGCAACTTGCTTGGATGGATTAGAAGGTACATCTCGGGTCATTATGGAAAATGACCTTCAGGACTTGATATCCAGAGCTAGATCTTCCCTAGCTGTGTTTCTTGTTGTTTTTCCTCAAAAAAATTGTGACCAATTCATTGATGAAACATTGATTGGAGAATTTCCTTCGTGGGTTACAAGCAAAGATAGGAGGCTTTTGGAGTCCGCGGTTGGGGACATAAAGGCAAATGTTGTGGTGGCTCAAGATGGGAGCGGCAAGTTCAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGACAATGGTAAGACAAAGTATGTTATCTATGTGAAAAAGGGAACATACAAAGAGAACATAGAAATTGGTTCCAAAAAAACAAATGTGATGCTCGTTGGTGATGGTATGGATGCAACAATAATCACAGGCAACTTAAATTTTATCGATGGGACAACAACCTTCAAAAGTTCAACCGTCGCTGCGGTTGGGGATGGGTTTATAGCACAAGACATTTGGTTCCAAAATACGGCAGGCGCAGCCAAGCACCAGGCAGTGGCTCTCCGTGTCGGCTCTGACCAATCTGTCATCAACCGTTGCCGCATTGACTCCTTTCAAGACACTCTTTACGCACACTCCAATAGGCAATTTTACCGTGACTCCGTCATTACAGGTACCATTGACTTCATCTTTGGAAACGCAGCTGTTGTGTTCCAGAAGTGCAAGTTGGTGGCCCGAAAGCCCATGGCCAACCAAAACAACATGTTTACAGCCCAAGGTCGAGAAGACCCAGGTCAAAACACAGGAACTTCAATTCAACAATGTGACCTAACACCAAGTTCAGACCTTAAGCCCGTTGCGGGCTCCATCAAAACATTCCTGGGTCGCCCATGGAAGAAATATTCCAGGACTGTTGTGATGCAATCCTTTCTGGACAGCCACATTGACCCAACAGGATGGGCTGAGTGGGATGCTGCGAGTAAGGACTTTCTGAAAACATTGTATTACGGAGAGTACATGAACAACGGACCAGGTGCTGGTACTGCCAAGAGAGTCACTTGGCCAGGTTATCATGTCATCAAAACTGCTGCAGAGGCTAGCAAGTTTACAGTAGCGCAACTAATCCAAGGAAATGTTTGGTTGAAGAACACAGGGGTGGCCTTTACCGAAGGCTTGTAA
Protein sequence

>Msa1103450

MASQQSLLDNPRKSLPKTFWLILSLVAIISSSALISTHLKKPISFFHLTTAPHFYCEHAVDAKSCLAHVSEVSHVPTLVTTKDQSLHVLLSLLTKSTTHIQKTMDTANVIKRRINSHREEMSLSDCEELMDLSMNRIWDSMLKLTKNNIDSYQDAHTWLSSVLTNHATCLDGLEGTSRVIMENDLQDLISRARSSLAVFLVVFPQKNCDQFIDETLIGEFPSWVTSKDRRLLESAVGDIKANVVVAQDGSGKFKTVAEAVASAPDNGKTKYVIYVKKGTYKENIEIGSKKTNVMLVGDGMDATIITGNLNFIDGTTTFKSSTVAAVGDGFIAQDIWFQNTAGAAKHQAVALRVGSDQSVINRCRIDSFQDTLYAHSNRQFYRDSVITGTIDFIFGNAAVVFQKCKLVARKPMANQNNMFTAQGREDPGQNTGTSIQQCDLTPSSDLKPVAGSIKTFLGRPWKKYSRTVVMQSFLDSHIDPTGWAEWDAASKDFLKTLYYGEYMNNGPGAGTAKRVTWPGYHVIKTAAEASKFTVAQLIQGNVWLKNTGVAFTEGL*