AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1066150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1066150 MtrunA17_Chr7g0246701 96.552 638 22 0 1 638 1 638 0.0 1298
Msa1066150 MtrunA17_Chr8g0350391 75.197 633 153 4 4 633 7 638 0.0 1010
Msa1066150 MtrunA17_Chr6g0472571 63.550 631 215 6 7 633 15 634 0.0 852
Msa1066150 MtrunA17_Chr1g0203741 62.857 630 218 7 1 626 1 618 0.0 833
Msa1066150 MtrunA17_Chr8g0388881 59.040 625 233 6 18 634 20 629 0.0 774
Msa1066150 MtrunA17_Chr4g0055031 56.822 623 242 7 10 627 5 605 0.0 740
Msa1066150 MtrunA17_Chr8g0361791 55.099 608 246 6 23 626 17 601 0.0 714
Msa1066150 MtrunA17_Chr5g0416991 53.571 616 255 7 18 627 11 601 0.0 688
Msa1066150 MtrunA17_Chr3g0092501 51.929 622 263 7 10 627 10 599 0.0 662
Msa1066150 MtrunA17_Chr7g0214551 51.887 530 249 3 95 619 37 565 0.0 613
Msa1066150 MtrunA17_Chr8g0369481 50.379 528 248 10 102 625 71 588 1.04e-179 522
Msa1066150 MtrunA17_Chr5g0409411 44.778 632 298 17 12 636 11 598 3.16e-171 501
Msa1066150 MtrunA17_Chr8g0350351 44.465 542 271 10 93 626 82 601 3.06e-167 491
Msa1066150 MtrunA17_Chr7g0246681 46.981 530 253 9 104 625 78 587 1.23e-166 489
Msa1066150 MtrunA17_Chr1g0183721 41.783 572 295 12 69 625 37 585 7.22e-155 459
Msa1066150 MtrunA17_Chr3g0112341 44.299 535 269 13 103 627 155 670 9.65e-152 453
Msa1066150 MtrunA17_Chr1g0167381 45.117 512 253 10 102 601 93 588 1.24e-149 446
Msa1066150 MtrunA17_Chr1g0187601 43.704 540 271 12 102 625 92 614 3.54e-146 437
Msa1066150 MtrunA17_Chr5g0435751 38.650 652 295 20 25 622 17 617 4.23e-143 429
Msa1066150 MtrunA17_Chr1g0159741 42.481 532 275 14 105 624 146 658 8.14e-140 422
Msa1066150 MtrunA17_Chr3g0130381 39.733 599 312 21 56 631 210 782 9.39e-132 405
Msa1066150 MtrunA17_Chr1g0171781 36.143 617 341 13 27 626 24 604 7.19e-129 392
Msa1066150 MtrunA17_Chr5g0437501 36.076 632 337 22 21 625 14 605 3.38e-127 388
Msa1066150 MtrunA17_Chr8g0384431 39.711 554 294 17 69 602 254 787 6.44e-127 394
Msa1066150 MtrunA17_Chr3g0113981 39.474 532 277 14 110 630 175 672 2.34e-126 388
Msa1066150 MtrunA17_Chr3g0125511 39.926 541 283 18 109 631 232 748 7.79e-125 387
Msa1066150 MtrunA17_Chr8g0372471 39.299 542 280 16 103 625 379 890 5.05e-121 380
Msa1066150 MtrunA17_Chr1g0155141 34.659 528 294 16 111 625 210 699 2.32e-92 300
Msa1066150 MtrunA17_Chr3g0115931 30.435 644 365 20 20 625 90 688 1.78e-89 292
Msa1066150 MtrunA17_Chr5g0426281 29.937 638 366 22 20 625 82 670 5.34e-88 288
Msa1066150 MtrunA17_Chr5g0404771 48.101 237 102 6 103 327 321 548 1.98e-67 230
Msa1066150 MtrunA17_Chr4g0043121 29.691 421 258 12 1 411 5 397 4.40e-53 188
Msa1066150 MtrunA17_Chr5g0404761 33.566 286 160 11 353 625 4 272 1.19e-45 163
Msa1066150 MtrunA17_Chr4g0043131 43.151 146 77 4 482 624 40 182 1.15e-33 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1066150 AT2G45750.1 68.810 622 180 4 18 635 14 625 0.0 920
Msa1066150 AT4G00750.1 68.612 634 181 6 4 633 11 630 0.0 920
Msa1066150 AT4G10440.1 60.267 599 230 3 29 627 28 618 0.0 778
Msa1066150 AT1G33170.1 57.643 628 241 5 19 628 17 637 0.0 775
Msa1066150 AT1G26850.2 56.579 608 244 5 22 626 19 609 0.0 725
Msa1066150 AT1G26850.1 56.579 608 244 5 22 626 19 609 0.0 725
Msa1066150 AT4G18030.1 56.585 615 246 8 14 627 11 605 0.0 707
Msa1066150 AT2G43200.2 52.308 520 242 4 102 620 92 606 0.0 583
Msa1066150 AT2G43200.1 52.308 520 242 4 102 620 92 606 0.0 583
Msa1066150 AT1G26850.3 53.984 502 211 5 22 520 19 503 0.0 563
Msa1066150 AT1G31850.1 45.981 622 298 13 10 625 7 596 0.0 538
Msa1066150 AT1G31850.2 45.981 622 298 13 10 625 7 596 0.0 538
Msa1066150 AT1G31850.4 45.981 622 298 13 10 625 7 596 0.0 538
Msa1066150 AT1G31850.3 45.981 622 298 13 10 625 7 596 0.0 538
Msa1066150 AT4G19120.1 48.099 526 261 9 104 625 73 590 2.08e-176 514
Msa1066150 AT4G19120.2 48.099 526 261 9 104 625 73 590 2.08e-176 514
Msa1066150 AT4G00740.1 46.069 547 261 13 93 628 73 596 1.60e-167 492
Msa1066150 AT4G00740.2 46.069 547 261 13 93 628 73 596 1.60e-167 492
Msa1066150 AT1G04430.1 44.090 533 270 10 81 601 64 580 6.00e-151 450
Msa1066150 AT1G04430.3 44.090 533 270 10 81 601 64 580 6.00e-151 450
Msa1066150 AT1G04430.2 44.090 533 270 10 81 601 64 580 6.00e-151 450
Msa1066150 AT2G39750.1 42.308 546 284 13 93 627 169 694 5.86e-149 447
Msa1066150 AT4G19120.3 49.309 434 209 8 104 533 73 499 1.46e-146 434
Msa1066150 AT4G14360.1 44.727 512 255 10 102 601 77 572 1.53e-146 438
Msa1066150 AT4G14360.2 44.727 512 255 10 102 601 77 572 1.53e-146 438
Msa1066150 AT3G23300.2 42.251 542 283 11 102 629 80 605 7.23e-145 434
Msa1066150 AT3G23300.1 42.251 542 283 11 102 629 80 605 7.23e-145 434
Msa1066150 AT5G06050.1 41.530 549 286 15 90 624 136 663 9.77e-145 436
Msa1066150 AT5G14430.1 41.413 623 315 18 25 628 16 607 3.23e-144 432
Msa1066150 AT1G77260.1 42.541 543 279 14 92 623 134 654 9.63e-143 430
Msa1066150 AT5G14430.2 41.091 623 317 18 25 628 16 607 2.90e-142 427
Msa1066150 AT5G04060.1 39.781 548 289 12 92 626 79 598 3.86e-132 401
Msa1066150 AT3G10200.1 40.185 540 283 14 103 626 74 589 7.49e-131 397
Msa1066150 AT2G40280.1 40.968 537 263 17 110 631 90 587 4.63e-130 395
Msa1066150 AT3G56080.1 41.210 529 264 16 110 625 114 608 1.38e-128 392
Msa1066150 AT1G29470.1 36.977 622 340 19 37 634 173 766 1.92e-128 397
Msa1066150 AT1G29470.2 36.977 622 340 19 37 634 173 766 1.92e-128 397
Msa1066150 AT2G34300.2 40.290 551 287 16 103 637 242 766 1.30e-127 395
Msa1066150 AT2G34300.3 40.290 551 287 16 103 637 242 766 1.30e-127 395
Msa1066150 AT2G34300.1 40.290 551 287 16 103 637 242 766 1.30e-127 395
Msa1066150 AT5G64030.1 39.292 537 277 16 110 625 308 816 4.91e-125 390
Msa1066150 AT3G51070.1 40.367 545 277 19 109 634 380 895 6.45e-125 391
Msa1066150 AT3G10200.2 39.744 546 277 15 103 620 74 595 1.47e-122 376
Msa1066150 AT3G56080.2 42.765 463 226 15 110 559 114 550 1.31e-114 354
Msa1066150 AT3G51070.2 41.453 468 237 16 109 559 380 827 1.17e-107 344
Msa1066150 AT1G19430.1 35.606 528 290 16 111 625 232 722 1.27e-94 307
Msa1066150 AT1G19430.3 35.606 528 290 16 111 625 232 722 1.27e-94 307
Msa1066150 AT1G13860.4 33.333 549 302 15 97 614 77 592 8.36e-91 293
Msa1066150 AT1G13860.3 33.333 549 302 15 97 614 77 592 8.36e-91 293
Msa1066150 AT1G13860.1 33.333 549 302 15 97 614 77 592 8.36e-91 293
Msa1066150 AT1G13860.5 33.333 549 302 15 97 614 77 592 8.36e-91 293
Msa1066150 AT1G78240.1 33.874 555 308 17 104 624 149 678 1.29e-89 293
Msa1066150 AT1G78240.2 33.874 555 308 17 104 624 149 678 1.29e-89 293
Msa1066150 AT2G03480.2 32.616 558 303 15 95 624 80 592 8.93e-88 285
Msa1066150 AT2G03480.1 32.258 558 316 16 95 624 80 603 3.15e-84 276
Msa1066150 AT1G13860.2 34.649 456 248 13 187 614 3 436 1.31e-79 259
Msa1066150 AT1G19430.2 33.586 396 219 13 111 494 232 595 4.42e-54 195
Msa1066150 AT2G03480.3 30.581 327 208 6 95 411 80 397 2.68e-46 169

Find 215 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAAACCACCCACATAAA+TGG 0.193676 7_2:+60107042 None:intergenic
CTTCAAAATGAACCCAATTC+TGG 0.218015 7_2:+60111197 None:intergenic
TATCAGGGCCACCAATAAAT+TGG 0.228314 7_2:-60109344 Msa1066150:CDS
CAATGGCTCTCCCAATTTAT+TGG 0.228514 7_2:+60109333 None:intergenic
TTCGGACGGACCCATCTTTA+AGG 0.233056 7_2:+60111089 None:intergenic
TTTGACAACTTTGTAATTGA+TGG 0.245277 7_2:+60106964 None:intergenic
CATTCTGGCCCCAAGGAATT+AGG 0.252109 7_2:+60109579 None:intergenic
GTCACACGCGCTGCGGATTC+TGG 0.263634 7_2:+60111466 None:intergenic
GAGAGAAAGAGGGTTTAGTT+TGG 0.291150 7_2:+60111921 None:intergenic
TCAATGTATATTTACCATTC+TGG 0.300268 7_2:+60109564 None:intergenic
CTCACGTTGCCTAATTCCTT+GGG 0.309107 7_2:-60109588 Msa1066150:CDS
AAGGATTAGCAGTGGAAGTT+TGG 0.319848 7_2:-60108505 Msa1066150:CDS
TGTCAAACATGTATCCATTT+TGG 0.323300 7_2:+60108611 None:intergenic
GGAGGGTATTGGATTCTATC+AGG 0.324275 7_2:-60109360 Msa1066150:CDS
TGCAAACCACCCACATAAAT+GGG 0.324448 7_2:+60107043 None:intergenic
GGTGACCGGTTCAGGTTTCC+TGG 0.324820 7_2:-60111175 Msa1066150:CDS
AATTAATCAGGTTGCAAGTT+GGG 0.358924 7_2:-60109777 Msa1066150:intron
GCTGCGGATTCTGGTGGGTC+GGG 0.359022 7_2:+60111475 None:intergenic
ACAATATTCATGACCCAAAC+TGG 0.359706 7_2:+60108318 None:intergenic
GATGGCGGCGGAGGTGGTGG+TGG 0.359751 7_2:+60111612 None:intergenic
TTGCAATGAATATGATTAGT+AGG 0.361054 7_2:+60109189 None:intergenic
AGGAAGAAAGAGAGAGAAAG+AGG 0.367208 7_2:+60111910 None:intergenic
GCTCACGTTGCCTAATTCCT+TGG 0.368109 7_2:-60109589 Msa1066150:CDS
GGTGGCCTGAGAGCCGTGAT+TGG 0.371034 7_2:-60111270 Msa1066150:CDS
AAAGAATTAGCCATTGTTGT+TGG 0.377603 7_2:+60111748 None:intergenic
GCCGGAGATGGCGGCGGAGG+TGG 0.380019 7_2:+60111606 None:intergenic
CAATGATTGATGATCCAGTT+TGG 0.380101 7_2:-60108332 Msa1066150:CDS
AGTCTTGAGAGAGGTTTGTT+GGG 0.382054 7_2:+60111703 None:intergenic
GAGTCTTGAGAGAGGTTTGT+TGG 0.382542 7_2:+60111702 None:intergenic
AAATTAGTTTGTGGGCAATC+AGG 0.386232 7_2:+60111553 None:intergenic
GGCGGCGGAGGTGGTGGTGG+AGG 0.387506 7_2:+60111615 None:intergenic
ACCGCTTTAGACACCGGTTG+TGG 0.389827 7_2:-60111067 Msa1066150:CDS
CGAGGAGTTCCAGCTTTGAT+TGG 0.389949 7_2:-60109668 Msa1066150:CDS
CGGAGAGAAAGAGAAAGAAA+AGG 0.393918 7_2:+60111781 None:intergenic
TTGGGTCATGAATATTGTTC+CGG 0.398019 7_2:-60108313 Msa1066150:CDS
ACTTGATATGAATGCTTACA+TGG 0.416586 7_2:-60108370 Msa1066150:CDS
GGTATGCGACGTCGGTTTAT+CGG 0.416955 7_2:-60111434 Msa1066150:CDS
CGGTTCAGGTTTCCTGGTGG+TGG 0.418362 7_2:-60111169 Msa1066150:CDS
GGAGATGGCGGCGGAGGTGG+TGG 0.420969 7_2:+60111609 None:intergenic
GGAACTGATGTTAGTCTCTC+AGG 0.432324 7_2:+60108531 None:intergenic
GTGGTGGAGGATTGTCGAAT+TGG 0.432397 7_2:-60108554 Msa1066150:CDS
CAATAAATTGGGAGAGCCAT+TGG 0.441065 7_2:-60109332 Msa1066150:CDS
AGGATCCTTTGCATCACAAA+AGG 0.443703 7_2:+60109137 None:intergenic
TCAATCGTCAATTCTTTATG+TGG 0.449181 7_2:+60111229 None:intergenic
CGCTGCGGATTCTGGTGGGT+CGG 0.450044 7_2:+60111474 None:intergenic
GTATATTACCATGCTGAGTC+AGG 0.460310 7_2:+60109117 None:intergenic
GGAGAGAAAGAGAAAGAAAA+GGG 0.460567 7_2:+60111782 None:intergenic
GGCGGAACGCGGTAGCCATA+TGG 0.460938 7_2:+60111295 None:intergenic
TGATTATCAGCTAGCAGAGC+CGG 0.461365 7_2:-60108409 Msa1066150:CDS
TGAGCTTCATGTGTGTCTCT+TGG 0.461890 7_2:+60109710 None:intergenic
CATTCATATCAAGTAAATTA+CGG 0.462099 7_2:+60108379 None:intergenic
TGCTACGTCCTGGAGGGTAT+TGG 0.462923 7_2:-60109371 Msa1066150:CDS
AGAAGGGTGACATTGCAATA+TGG 0.465380 7_2:-60109218 Msa1066150:CDS
TTGGTGTTATTGCCTCAATT+AGG 0.466240 7_2:-60109649 Msa1066150:CDS
ATCAGCATGTATAAAGTCAT+AGG 0.466475 7_2:+60107551 None:intergenic
CTGAGAGCCGTGATTGGGCT+TGG 0.467893 7_2:-60111264 Msa1066150:CDS
ATCAGGGCCACCAATAAATT+GGG 0.468994 7_2:-60109343 Msa1066150:CDS
GGTGGAGTGGTGATTGTTGC+CGG 0.469902 7_2:+60111588 None:intergenic
TCCAACCCCATTTATGTGGG+TGG 0.470520 7_2:-60107049 Msa1066150:three_prime_UTR
GTGGCCTGAGAGCCGTGATT+GGG 0.470858 7_2:-60111269 Msa1066150:CDS
CATGAATATTGTTCCGGTCC+AGG 0.471627 7_2:-60108307 Msa1066150:CDS
ACCACCTCCGCCGCCATCTC+CGG 0.471918 7_2:-60111607 Msa1066150:CDS
TCAAAGAAAATACCGAGTTA+TGG 0.474678 7_2:-60108461 Msa1066150:CDS
AAGCTCATCAACCTTAAAGA+TGG 0.474916 7_2:-60111100 Msa1066150:CDS
GAGGGTTTAGTTTGGACTGA+GGG 0.476226 7_2:+60111929 None:intergenic
GGTGCGTACATTGATGATAT+CGG 0.477671 7_2:-60111124 Msa1066150:CDS
GATTCTCCGGTGTCGGATAC+CGG 0.478052 7_2:-60111320 Msa1066150:CDS
GATTATCAGCTAGCAGAGCC+GGG 0.479427 7_2:-60108408 Msa1066150:CDS
GCCATGTCAAAGGCTCTTGA+AGG 0.481184 7_2:+60109617 None:intergenic
ATATAGAGAGAGAGAAAGGA+AGG 0.481740 7_2:+60111890 None:intergenic
GTGGTGATTGTTGCCGGAGA+TGG 0.482734 7_2:+60111594 None:intergenic
GCCATTGGAAAGGGTGGGAG+AGG 0.486448 7_2:-60109317 Msa1066150:CDS
GTATATATAGAGAGAGAGAA+AGG 0.486854 7_2:+60111886 None:intergenic
TGATCGGAACATATCAGAAC+TGG 0.488249 7_2:-60108245 Msa1066150:intron
GTTGCCGGAGATGGCGGCGG+AGG 0.488922 7_2:+60111603 None:intergenic
TAGAATTGCAGACCATGAAA+AGG 0.489139 7_2:-60107255 Msa1066150:CDS
GTTTATGAACGCGGATTGAT+CGG 0.489841 7_2:-60108261 Msa1066150:CDS
CAAGCCCAATCACGGCTCTC+AGG 0.490524 7_2:+60111265 None:intergenic
ACATTCTTCTTGAGATGGAT+AGG 0.492398 7_2:-60107370 Msa1066150:CDS
TGGCTCTCCCAATTTATTGG+TGG 0.493582 7_2:+60109336 None:intergenic
CGACCGCTGCACGTCCTCAC+AGG 0.494021 7_2:+60111402 None:intergenic
CACCACCAGGAAACCTGAAC+CGG 0.497526 7_2:+60111170 None:intergenic
CTGCGGATTCTGGTGGGTCG+GGG 0.498213 7_2:+60111476 None:intergenic
GTGGAGGTGAAATTAGTTTG+TGG 0.499075 7_2:+60111544 None:intergenic
CCGCTTTAGACACCGGTTGT+GGG 0.499535 7_2:-60111066 Msa1066150:CDS
AATGATTGATGATCCAGTTT+GGG 0.502411 7_2:-60108331 Msa1066150:CDS
ATAAAAGAAGTTAGTGGTGG+AGG 0.502506 7_2:-60108567 Msa1066150:CDS
GAGACACTGTCCGGAGAAAG+AGG 0.505810 7_2:-60111344 Msa1066150:CDS
TTACATAATTCATCAAGTAA+AGG 0.506141 7_2:+60106878 None:intergenic
AGCGGTCGTTGAAATTTCCT+CGG 0.506218 7_2:-60111387 Msa1066150:CDS
GTTGATAGAGTGCTACGTCC+TGG 0.506357 7_2:-60109381 Msa1066150:CDS
CAATTTACCTGTCCTCATAG+AGG 0.506394 7_2:+60107517 None:intergenic
TCGTAGCAGTCAAGCAGTAT+TGG 0.506480 7_2:-60107208 Msa1066150:CDS
CTAATTCCTTGGGGCCAGAA+TGG 0.507755 7_2:-60109578 Msa1066150:intron
GTCATAGGTTCGAGGATAAG+TGG 0.507789 7_2:+60107566 None:intergenic
ACCATGTTTCCACGTGGCGC+TGG 0.508694 7_2:-60111145 Msa1066150:CDS
CGGAGAATCTCCTCTTTCTC+CGG 0.508889 7_2:+60111334 None:intergenic
GAATTAATCAGGTTGCAAGT+TGG 0.509111 7_2:-60109778 Msa1066150:intron
ATTAGCAGTGGAAGTTTGGA+TGG 0.509258 7_2:-60108501 Msa1066150:CDS
TCCTCTCCCACCCTTTCCAA+TGG 0.515898 7_2:+60109316 None:intergenic
TGGGCAATCAGGGCGGATGA+TGG 0.516410 7_2:+60111564 None:intergenic
AGAGGACATTCTTCTTGAGA+TGG 0.516456 7_2:-60107375 Msa1066150:CDS
AGAAAGTAGAGTCTTGAGAG+AGG 0.518829 7_2:+60111694 None:intergenic
ATGTCAGATACCTCAGGAAG+TGG 0.522438 7_2:+60108588 None:intergenic
TGGAGGTGAAATTAGTTTGT+GGG 0.527107 7_2:+60111545 None:intergenic
TTGTTGTTGGATAAAGAAAA+CGG 0.527945 7_2:+60111761 None:intergenic
GGTTCAGGTTTCCTGGTGGT+GGG 0.530907 7_2:-60111168 Msa1066150:CDS
AAACTTCCACTGCTAATCCT+TGG 0.531039 7_2:+60108507 None:intergenic
AGTGATGGAAGAAGTGGTGG+TGG 0.532008 7_2:+60111525 None:intergenic
GATGGAAGAAGTGGTGGTGG+AGG 0.532285 7_2:+60111528 None:intergenic
ATTGGGAGAGCCATTGGAAA+GGG 0.532321 7_2:-60109326 Msa1066150:CDS
TGATGTGGATGTGTTGTTGA+AGG 0.534088 7_2:-60107312 Msa1066150:CDS
CGCTTTAGACACCGGTTGTG+GGG 0.535671 7_2:-60111065 Msa1066150:intron
TCTGACATAAAAGAAGTTAG+TGG 0.535713 7_2:-60108573 Msa1066150:CDS
AATTAGTTTGTGGGCAATCA+GGG 0.536410 7_2:+60111554 None:intergenic
GCGGTCGTTGAAATTTCCTC+GGG 0.540278 7_2:-60111386 Msa1066150:CDS
ATCAGGGCGGATGATGGTGG+TGG 0.540450 7_2:+60111570 None:intergenic
GGCGGATGATGGTGGTGGAG+TGG 0.540502 7_2:+60111575 None:intergenic
AGAATTGCAGACCATGAAAA+GGG 0.540625 7_2:-60107254 Msa1066150:CDS
TCAAAGGCTCTTGAAGGGTA+AGG 0.540759 7_2:+60109623 None:intergenic
CGGAGAAAGAGGAGATTCTC+CGG 0.542225 7_2:-60111333 Msa1066150:CDS
CATGAAACAAGTAACGTCAA+TGG 0.543022 7_2:-60111835 Msa1066150:five_prime_UTR
ACCACCCACATAAATGGGGT+TGG 0.543751 7_2:+60107048 None:intergenic
GCAATCAGGGCGGATGATGG+TGG 0.544035 7_2:+60111567 None:intergenic
ATTAATCAGGTTGCAAGTTG+GGG 0.545923 7_2:-60109776 Msa1066150:intron
GTCCGAACCGCTTTAGACAC+CGG 0.546098 7_2:-60111073 Msa1066150:CDS
CTTCCACTGCTAATCCTTGG+TGG 0.547020 7_2:+60108510 None:intergenic
AACCGGTGTCTAAAGCGGTT+CGG 0.547844 7_2:+60111071 None:intergenic
AGCTCATCAACCTTAAAGAT+GGG 0.549048 7_2:-60111099 Msa1066150:CDS
GTGTTGATCTCAGCCTGGAC+CGG 0.550617 7_2:+60108294 None:intergenic
ATTGTTGCCGGAGATGGCGG+CGG 0.550902 7_2:+60111600 None:intergenic
GCAATAACACCAATCAAAGC+TGG 0.551247 7_2:+60109659 None:intergenic
AGAGGGTTTAGTTTGGACTG+AGG 0.551393 7_2:+60111928 None:intergenic
CAGGCCACCGCGGCGGAACG+CGG 0.553063 7_2:+60111284 None:intergenic
ACCAGCGCCACGTGGAAACA+TGG 0.553389 7_2:+60111144 None:intergenic
ACACGCGCTGCGGATTCTGG+TGG 0.554767 7_2:+60111469 None:intergenic
AATTTACCTGTCCTCATAGA+GGG 0.556718 7_2:+60107518 None:intergenic
GGAAACATGGTCCCACCACC+AGG 0.557115 7_2:+60111157 None:intergenic
GGAAGAAAGAGAGAGAAAGA+GGG 0.557775 7_2:+60111911 None:intergenic
CAAATCTTAAGAAGACCAAA+AGG 0.559693 7_2:+60107133 None:intergenic
GTGTGACAGATGTAATATAG+AGG 0.560024 7_2:-60107393 Msa1066150:intron
ATCAAGAGTGATGGAAGAAG+TGG 0.562278 7_2:+60111519 None:intergenic
TCATTGCAAAATAACAAGAA+AGG 0.562481 7_2:-60109175 Msa1066150:CDS
TGTCGGATACCGGCACCATA+TGG 0.563020 7_2:-60111310 Msa1066150:CDS
CGCGTTAGTCACACGCGCTG+CGG 0.563602 7_2:+60111459 None:intergenic
CACGCGCTGCGGATTCTGGT+GGG 0.563714 7_2:+60111470 None:intergenic
TTATCGTGAGAGACACTGTC+CGG 0.564748 7_2:-60111353 Msa1066150:CDS
GAGAAAGAGAAAGAAAAGGG+TGG 0.565117 7_2:+60111785 None:intergenic
TTGAGATGGATAGGATATTG+AGG 0.565653 7_2:-60107361 Msa1066150:CDS
GGATCCTTTGCATCACAAAA+GGG 0.566364 7_2:+60109138 None:intergenic
CCCTTCAAGAGCCTTTGACA+TGG 0.567074 7_2:-60109618 Msa1066150:CDS
ATTTGCAGATGCAATGCAAT+GGG 0.567404 7_2:-60107282 Msa1066150:CDS
CGCAATATCACACTCCCTTG+TGG 0.570708 7_2:+60107338 None:intergenic
GGGAGAGCCATTGGAAAGGG+TGG 0.572041 7_2:-60109323 Msa1066150:CDS
TGTGATATTGCGTGATGATG+TGG 0.575145 7_2:-60107327 Msa1066150:CDS
GATAAACCGACGTCGCATAC+CGG 0.580254 7_2:+60111436 None:intergenic
GATAGGATATTGAGGCCACA+AGG 0.581622 7_2:-60107353 Msa1066150:CDS
TATTTACCATTCTGGCCCCA+AGG 0.581713 7_2:+60109572 None:intergenic
CTTGATATGAATGCTTACAT+GGG 0.587393 7_2:-60108369 Msa1066150:CDS
GATTTGCAGATGCAATGCAA+TGG 0.589141 7_2:-60107283 Msa1066150:CDS
CAGGCTGAGATCAACACACT+TGG 0.589859 7_2:-60108288 Msa1066150:CDS
GATAGAATCCAATACCCTCC+AGG 0.591531 7_2:+60109363 None:intergenic
GATATGAATGCTTACATGGG+AGG 0.592658 7_2:-60108366 Msa1066150:CDS
AACTCTCTTCTTCCATAACT+CGG 0.594085 7_2:+60108449 None:intergenic
AAGAGGAGATTCTCCGGTGT+CGG 0.594261 7_2:-60111327 Msa1066150:CDS
GACATAAAAGAAGTTAGTGG+TGG 0.594804 7_2:-60108570 Msa1066150:CDS
AGGGTTTAGTTTGGACTGAG+GGG 0.599146 7_2:+60111930 None:intergenic
CAAAGGATCCTGACTCAGCA+TGG 0.601524 7_2:-60109125 Msa1066150:intron
GAGGGTATTGGATTCTATCA+GGG 0.605036 7_2:-60109359 Msa1066150:CDS
GACCGCTGCACGTCCTCACA+GGG 0.605077 7_2:+60111403 None:intergenic
CAAGTGTGTTGATCTCAGCC+TGG 0.607724 7_2:+60108289 None:intergenic
ACGCGGTAGCCATATGGTGC+CGG 0.608965 7_2:+60111301 None:intergenic
AGCGCGTGTGACTAACGCGC+CGG 0.610056 7_2:-60111455 Msa1066150:CDS
AATTGGGAGAGCCATTGGAA+AGG 0.610487 7_2:-60109327 Msa1066150:CDS
AGTAAATTACGGTATCTCCC+CGG 0.611082 7_2:+60108390 None:intergenic
CCATGTCAAAGGCTCTTGAA+GGG 0.615041 7_2:+60109618 None:intergenic
TAGCATACCAAGCCCAATCA+CGG 0.616099 7_2:+60111257 None:intergenic
TGAGCAATGAGCCATGTCAA+AGG 0.616646 7_2:+60109607 None:intergenic
ACAGACTTCAATTGAGAGAG+TGG 0.617914 7_2:-60109271 Msa1066150:CDS
GGAGAGCCATTGGAAAGGGT+GGG 0.618351 7_2:-60109322 Msa1066150:CDS
TCACGTTGCCTAATTCCTTG+GGG 0.618705 7_2:-60109587 Msa1066150:CDS
GTTCAATTTGCTCTTGAACG+AGG 0.620941 7_2:-60109686 Msa1066150:CDS
ATGTTTGACACCACTTCCTG+AGG 0.623014 7_2:-60108598 Msa1066150:CDS
CTTGGTGTCGTTTATGAACG+CGG 0.623640 7_2:-60108270 Msa1066150:CDS
ATGGTGCCGGTATCCGACAC+CGG 0.623922 7_2:+60111314 None:intergenic
CTCCCTGTGAGGACGTGCAG+CGG 0.626087 7_2:-60111405 Msa1066150:CDS
GTGATTGTTGCCGGAGATGG+CGG 0.629068 7_2:+60111597 None:intergenic
CGATAAATTAAATTCTCCCG+AGG 0.629535 7_2:+60111370 None:intergenic
AACGCGCCGGTATGCGACGT+CGG 0.631415 7_2:-60111442 Msa1066150:CDS
AAGAGTGATGGAAGAAGTGG+TGG 0.632236 7_2:+60111522 None:intergenic
CGGCTCTCAGGCCACCGCGG+CGG 0.640963 7_2:+60111277 None:intergenic
TGTATAAAGTCATAGGTTCG+AGG 0.642463 7_2:+60107558 None:intergenic
ATAGAGTGCTACGTCCTGGA+GGG 0.642534 7_2:-60109377 Msa1066150:CDS
TCACGGCTCTCAGGCCACCG+CGG 0.646633 7_2:+60111274 None:intergenic
CCCACAACCGGTGTCTAAAG+CGG 0.650759 7_2:+60111066 None:intergenic
GGTGTCTAAAGCGGTTCGGA+CGG 0.653499 7_2:+60111075 None:intergenic
ATGGCTACCGCGTTCCGCCG+CGG 0.656127 7_2:-60111291 Msa1066150:CDS
GGTTCGAGGATAAGTGGACA+TGG 0.656711 7_2:+60107572 None:intergenic
CTTGTTTCATGAGAGTGACG+CGG 0.657630 7_2:+60111847 None:intergenic
GCAAACCACCCACATAAATG+GGG 0.658901 7_2:+60107044 None:intergenic
GTTCCACCAAGGATTAGCAG+TGG 0.659990 7_2:-60108513 Msa1066150:CDS
GCTACCGCGTTCCGCCGCGG+TGG 0.663765 7_2:-60111288 Msa1066150:CDS
GATAGAGTGCTACGTCCTGG+AGG 0.664230 7_2:-60109378 Msa1066150:CDS
ATGTACGCACCAGCGCCACG+TGG 0.671011 7_2:+60111136 None:intergenic
GGTGCAGAGGATGATGGTGA+AGG 0.675786 7_2:+60111669 None:intergenic
ATTATCAGCTAGCAGAGCCG+GGG 0.679309 7_2:-60108407 Msa1066150:CDS
TAGTTTGTGGGCAATCAGGG+CGG 0.688675 7_2:+60111557 None:intergenic
GACACTGCTAATATGTCACG+TGG 0.691648 7_2:+60109740 None:intergenic
GACTAACATCAGTTCCACCA+AGG 0.691717 7_2:-60108524 Msa1066150:CDS
GACCGGTTCAGGTTTCCTGG+TGG 0.693052 7_2:-60111172 Msa1066150:CDS
AGGGTGGGAGAGGACTCGTG+AGG 0.694135 7_2:-60109307 Msa1066150:CDS
AGGGTAAGGAAGCCTAATTG+AGG 0.701746 7_2:+60109637 None:intergenic
ATAGGATATTGAGGCCACAA+GGG 0.708060 7_2:-60107352 Msa1066150:CDS
ATCGGAGTATACTCCCTGTG+AGG 0.727002 7_2:-60111416 Msa1066150:CDS
GGTGGGACCATGTTTCCACG+TGG 0.790969 7_2:-60111151 Msa1066150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATAAATGTATATGATTT+TGG - chr7_2:60108156-60108175 Msa1066150:intron 10.0%
!!! ATGAAAATTGTATATAATTT+TGG - chr7_2:60108193-60108212 Msa1066150:intron 10.0%
!! TAAATAAAAAATTACAAAAC+TGG + chr7_2:60108277-60108296 None:intergenic 10.0%
!! AAATTAATAGTTAAAAGAAT+AGG + chr7_2:60109732-60109751 None:intergenic 10.0%
!!! ATAAATTATTTTTTTTGGAA+TGG + chr7_2:60110109-60110128 None:intergenic 10.0%
!!! AAATTTCAATTAACGTTTTT+AGG - chr7_2:60107965-60107984 Msa1066150:intron 15.0%
!!! TAATCTATTTATTTGATAGT+TGG - chr7_2:60110046-60110065 Msa1066150:intron 15.0%
!!! AATTTTCTTTTCTTCATTTT+AGG - chr7_2:60110180-60110199 Msa1066150:intron 15.0%
!!! TATTTACCTTTCTTTAAAAT+TGG + chr7_2:60110638-60110657 None:intergenic 15.0%
!! ACTTTAAATTTAATTATTGG+TGG + chr7_2:60110914-60110933 None:intergenic 15.0%
!! TGCACTTTAAATTTAATTAT+TGG + chr7_2:60110917-60110936 None:intergenic 15.0%
!!! TAAATAGTTATTTCTGAATT+TGG + chr7_2:60111341-60111360 None:intergenic 15.0%
!!! TATAATTTGATTTTTCCTTT+TGG - chr7_2:60111670-60111689 Msa1066150:CDS 15.0%
!! GTTAATTGAAATTTCTCAAT+TGG + chr7_2:60107959-60107978 None:intergenic 20.0%
!!! TTTTAGGTTGATTTTAGTTT+TGG - chr7_2:60107981-60108000 Msa1066150:intron 20.0%
!! AGAAAAATAAAGTCAAATGT+AGG + chr7_2:60108322-60108341 None:intergenic 20.0%
!! TTTAAACACTAAACGAAAAA+TGG - chr7_2:60108468-60108487 Msa1066150:CDS 20.0%
!! TATATTTCAATTTCAAAGCA+TGG + chr7_2:60108501-60108520 None:intergenic 20.0%
!! ACTTGATATATAGTTAGTTA+AGG - chr7_2:60108542-60108561 Msa1066150:CDS 20.0%
!! TATAGTTAGTTAAGGTATAT+TGG - chr7_2:60108550-60108569 Msa1066150:CDS 20.0%
!! TTGAAGTTATATTGTTTGTT+AGG - chr7_2:60108838-60108857 Msa1066150:intron 20.0%
!! ATGTTACAATTGAATTAATC+AGG - chr7_2:60109029-60109048 Msa1066150:intron 20.0%
!!! TTGTTTTATGTATTTGTAGA+TGG - chr7_2:60109398-60109417 Msa1066150:CDS 20.0%
!! ATAGTTAAAAGAATAGGAAA+AGG + chr7_2:60109726-60109745 None:intergenic 20.0%
!! TCAGAATTCAATATCTTAAA+AGG + chr7_2:60109758-60109777 None:intergenic 20.0%
!! CATTCATATCAAGTAAATTA+CGG + chr7_2:60110442-60110461 None:intergenic 20.0%
!! TTGTTGTTGGATAAAGAAAA+CGG + chr7_2:60107060-60107079 None:intergenic 25.0%
!! TTTTCTTTATCCAACAACAA+TGG - chr7_2:60107060-60107079 Msa1066150:three_prime_UTR 25.0%
! TTGAGAAAAAAAACCAGAAT+TGG - chr7_2:60107608-60107627 Msa1066150:intron 25.0%
! TGAGAAAAAAAACCAGAATT+GGG - chr7_2:60107609-60107628 Msa1066150:intron 25.0%
! ATTTCTCAATTGGTTGAATA+GGG + chr7_2:60107949-60107968 None:intergenic 25.0%
! AATTTCTCAATTGGTTGAAT+AGG + chr7_2:60107950-60107969 None:intergenic 25.0%
!! TATTTAGAACGTTTGAGAAT+TGG - chr7_2:60108029-60108048 Msa1066150:intron 25.0%
! AGAAAAAAGGGAAACATATA+GGG - chr7_2:60108618-60108637 Msa1066150:CDS 25.0%
!! TTCTAAGTTACTTCATTTTG+TGG - chr7_2:60108890-60108909 Msa1066150:intron 25.0%
! TCACAGTAAATTTCAAAGTA+AGG - chr7_2:60108941-60108960 Msa1066150:intron 25.0%
! CACAGTAAATTTCAAAGTAA+GGG - chr7_2:60108942-60108961 Msa1066150:intron 25.0%
! TCAATGTATATTTACCATTC+TGG + chr7_2:60109257-60109276 None:intergenic 25.0%
! GAATGGTAAATATACATTGA+CGG - chr7_2:60109257-60109276 Msa1066150:CDS 25.0%
! CTTTCAAATTAAAATGTGTC+TGG + chr7_2:60109346-60109365 None:intergenic 25.0%
! TTGCAATGAATATGATTAGT+AGG + chr7_2:60109632-60109651 None:intergenic 25.0%
! TCATTGCAAAATAACAAGAA+AGG - chr7_2:60109643-60109662 Msa1066150:CDS 25.0%
! ACAAGTAACTAAAGAGAAAA+GGG + chr7_2:60110147-60110166 None:intergenic 25.0%
! AACAAGTAACTAAAGAGAAA+AGG + chr7_2:60110148-60110167 None:intergenic 25.0%
!!! TTCTTTAAAATTGGTTGGTT+AGG + chr7_2:60110629-60110648 None:intergenic 25.0%
!!! AACCAACCAATTTTAAAGAA+AGG - chr7_2:60110629-60110648 Msa1066150:intron 25.0%
!!! TACCTTTCTTTAAAATTGGT+TGG + chr7_2:60110634-60110653 None:intergenic 25.0%
!!! AGTTTTTAAGAGAGTTGTAT+TGG - chr7_2:60110683-60110702 Msa1066150:intron 25.0%
!! TTTATTAGAGATGCTATTTG+AGG - chr7_2:60110730-60110749 Msa1066150:intron 25.0%
!!! AATTTTAGTGAGCTAAGATT+AGG + chr7_2:60110941-60110960 None:intergenic 25.0%
! GATAAAGCTATACTATAAGT+GGG + chr7_2:60111038-60111057 None:intergenic 25.0%
! CTATTGTAAAGGACAAAATT+AGG + chr7_2:60111109-60111128 None:intergenic 25.0%
!! CAATTTTCTGTCTATTGTAA+AGG + chr7_2:60111120-60111139 None:intergenic 25.0%
! TCACAAAGTTATTATATGAG+TGG + chr7_2:60111394-60111413 None:intergenic 25.0%
!!! TTTCTTTGTTGATTTTGTTC+AGG + chr7_2:60111648-60111667 None:intergenic 25.0%
! AAGTTGACATGAAAAAAGAA+AGG + chr7_2:60111724-60111743 None:intergenic 25.0%
!! TCATGTCAACTTAAATTTTC+AGG - chr7_2:60111732-60111751 Msa1066150:CDS 25.0%
!!! TAAACCCCAAACAATTTTTT+GGG + chr7_2:60111833-60111852 None:intergenic 25.0%
!!! ATAAACCCCAAACAATTTTT+TGG + chr7_2:60111834-60111853 None:intergenic 25.0%
! TTTGACAACTTTGTAATTGA+TGG + chr7_2:60111857-60111876 None:intergenic 25.0%
GTATATATAGAGAGAGAGAA+AGG + chr7_2:60106935-60106954 None:intergenic 30.0%
AAAGAATTAGCCATTGTTGT+TGG + chr7_2:60107073-60107092 None:intergenic 30.0%
TCAATCGTCAATTCTTTATG+TGG + chr7_2:60107592-60107611 None:intergenic 30.0%
TGCATGATAGTAAAAGAAAC+CGG + chr7_2:60107818-60107837 None:intergenic 30.0%
! CATTTTCAATGTCAATGAAC+CGG - chr7_2:60107848-60107867 Msa1066150:intron 30.0%
! ATTTTCAATGTCAATGAACC+GGG - chr7_2:60107849-60107868 Msa1066150:intron 30.0%
AAAGGGAATGTAGGTTAATT+GGG - chr7_2:60108052-60108071 Msa1066150:intron 30.0%
! TTTTCATAAGAAACGATTCC+TGG + chr7_2:60108135-60108154 None:intergenic 30.0%
GTCTATTATTGTGACTTAGT+TGG - chr7_2:60108413-60108432 Msa1066150:CDS 30.0%
CACTAAACGAAAAATGGATA+TGG - chr7_2:60108474-60108493 Msa1066150:CDS 30.0%
CTACGAAAAGGATAGATTTA+CGG + chr7_2:60108596-60108615 None:intergenic 30.0%
! CTTTTCGTAGAGAGAAAAAA+GGG - chr7_2:60108606-60108625 Msa1066150:CDS 30.0%
GAGAAAAAAGGGAAACATAT+AGG - chr7_2:60108617-60108636 Msa1066150:CDS 30.0%
TATGTTTGTGCACAAATTTG+TGG - chr7_2:60108916-60108935 Msa1066150:intron 30.0%
! AATTAATCAGGTTGCAAGTT+GGG - chr7_2:60109041-60109060 Msa1066150:intron 30.0%
AAATATACATTGACGGTCTT+CGG - chr7_2:60109264-60109283 Msa1066150:CDS 30.0%
TTGGAAAAAACTAGTTCAGA+AGG - chr7_2:60109583-60109602 Msa1066150:CDS 30.0%
TGGAAAAAACTAGTTCAGAA+GGG - chr7_2:60109584-60109603 Msa1066150:CDS 30.0%
CATTGTGATCATTAAGATTG+CGG - chr7_2:60109799-60109818 Msa1066150:intron 30.0%
ATTAAGATTGCGGAAAATTG+TGG - chr7_2:60109809-60109828 Msa1066150:intron 30.0%
! CTTTATCATCTAAGTGGTTT+TGG + chr7_2:60110013-60110032 None:intergenic 30.0%
CAAACTCTTTATCATCTAAG+TGG + chr7_2:60110019-60110038 None:intergenic 30.0%
AATAATCTCCACTTTCGAAA+AGG + chr7_2:60110080-60110099 None:intergenic 30.0%
! TCGAAAGTGGAGATTATTTT+TGG - chr7_2:60110082-60110101 Msa1066150:intron 30.0%
CAAGTAACTAAAGAGAAAAG+GGG + chr7_2:60110146-60110165 None:intergenic 30.0%
!! TCATTTTAGGTACACCAAAA+TGG - chr7_2:60110193-60110212 Msa1066150:intron 30.0%
! TGTCAAACATGTATCCATTT+TGG + chr7_2:60110210-60110229 None:intergenic 30.0%
TCTGACATAAAAGAAGTTAG+TGG - chr7_2:60110245-60110264 Msa1066150:intron 30.0%
TCAAAGAAAATACCGAGTTA+TGG - chr7_2:60110357-60110376 Msa1066150:intron 30.0%
ACTTGATATGAATGCTTACA+TGG - chr7_2:60110448-60110467 Msa1066150:intron 30.0%
CTTGATATGAATGCTTACAT+GGG - chr7_2:60110449-60110468 Msa1066150:intron 30.0%
! AATGATTGATGATCCAGTTT+GGG - chr7_2:60110487-60110506 Msa1066150:intron 30.0%
! TAAAATTGGTTGGTTAGGAA+CGG + chr7_2:60110624-60110643 None:intergenic 30.0%
CTGATTACAAAAAATGAGAG+AGG - chr7_2:60110760-60110779 Msa1066150:intron 30.0%
! AGCTCACTAAAATTTAGAGT+TGG - chr7_2:60110947-60110966 Msa1066150:intron 30.0%
! ACTTTATAACTGTGCACTTT+TGG - chr7_2:60110973-60110992 Msa1066150:intron 30.0%
CGATAAAGCTATACTATAAG+TGG + chr7_2:60111039-60111058 None:intergenic 30.0%
ATCAGCATGTATAAAGTCAT+AGG + chr7_2:60111270-60111289 None:intergenic 30.0%
GGACAGGTAAATTGTAAAAT+TGG - chr7_2:60111310-60111329 Msa1066150:CDS 30.0%
CAAATCTTAAGAAGACCAAA+AGG + chr7_2:60111688-60111707 None:intergenic 30.0%
ATTGACCCCAAAAAATTGTT+TGG - chr7_2:60111824-60111843 Msa1066150:five_prime_UTR 30.0%
TTGACCCCAAAAAATTGTTT+GGG - chr7_2:60111825-60111844 Msa1066150:five_prime_UTR 30.0%
!!! AAACCCCAAACAATTTTTTG+GGG + chr7_2:60111832-60111851 None:intergenic 30.0%
ATATAGAGAGAGAGAAAGGA+AGG + chr7_2:60106931-60106950 None:intergenic 35.0%
CATGAAACAAGTAACGTCAA+TGG - chr7_2:60106983-60107002 Msa1066150:three_prime_UTR 35.0%
GGAGAGAAAGAGAAAGAAAA+GGG + chr7_2:60107039-60107058 None:intergenic 35.0%
!! AATTAGTTTGTGGGCAATCA+GGG + chr7_2:60107267-60107286 None:intergenic 35.0%
!! AAATTAGTTTGTGGGCAATC+AGG + chr7_2:60107268-60107287 None:intergenic 35.0%
!! TGGAGGTGAAATTAGTTTGT+GGG + chr7_2:60107276-60107295 None:intergenic 35.0%
TGCTGAAAAATCAAGAGTGA+TGG + chr7_2:60107311-60107330 None:intergenic 35.0%
CGATAAATTAAATTCTCCCG+AGG + chr7_2:60107451-60107470 None:intergenic 35.0%
CTTCAAAATGAACCCAATTC+TGG + chr7_2:60107624-60107643 None:intergenic 35.0%
! CAGAATTGGGTTCATTTTGA+AGG - chr7_2:60107622-60107641 Msa1066150:intron 35.0%
AAGCTCATCAACCTTAAAGA+TGG - chr7_2:60107718-60107737 Msa1066150:intron 35.0%
AGCTCATCAACCTTAAAGAT+GGG - chr7_2:60107719-60107738 Msa1066150:intron 35.0%
! TACGTTTTTCTTCAATCTCC+CGG - chr7_2:60107776-60107795 Msa1066150:intron 35.0%
TTGTTGAACTAACCATAGAG+GGG + chr7_2:60107885-60107904 None:intergenic 35.0%
GTTGTTGAACTAACCATAGA+GGG + chr7_2:60107886-60107905 None:intergenic 35.0%
TGTTGTTGAACTAACCATAG+AGG + chr7_2:60107887-60107906 None:intergenic 35.0%
AGAACGTTTGAGAATTGGAA+AGG - chr7_2:60108034-60108053 Msa1066150:intron 35.0%
GAACGTTTGAGAATTGGAAA+GGG - chr7_2:60108035-60108054 Msa1066150:intron 35.0%
GAAAGGGAATGTAGGTTAAT+TGG - chr7_2:60108051-60108070 Msa1066150:intron 35.0%
TAATCATTGTGCGAAACAGA+CGG - chr7_2:60108216-60108235 Msa1066150:intron 35.0%
GAAAATTTCGTCACGTCTTT+AGG + chr7_2:60108448-60108467 None:intergenic 35.0%
!!! CCTTTTTTCTCTCTACGAAA+AGG + chr7_2:60108608-60108627 None:intergenic 35.0%
! CCTTTTCGTAGAGAGAAAAA+AGG - chr7_2:60108605-60108624 Msa1066150:CDS 35.0%
! GAATTAATCAGGTTGCAAGT+TGG - chr7_2:60109040-60109059 Msa1066150:intron 35.0%
! ATTAATCAGGTTGCAAGTTG+GGG - chr7_2:60109042-60109061 Msa1066150:intron 35.0%
!! TTGGTGTTATTGCCTCAATT+AGG - chr7_2:60109169-60109188 Msa1066150:CDS 35.0%
AGCAAATGTGTGTGAATATG+TGG - chr7_2:60109364-60109383 Msa1066150:CDS 35.0%
GTCAAATAAGACTGATGTCA+CGG - chr7_2:60109831-60109850 Msa1066150:intron 35.0%
TATCACTGCCAAACTCTATT+TGG + chr7_2:60109990-60110009 None:intergenic 35.0%
! TTTATGCACCTTTTCGAAAG+TGG - chr7_2:60110069-60110088 Msa1066150:intron 35.0%
! TCTTTTATGTCAGATACCTC+AGG + chr7_2:60110239-60110258 None:intergenic 35.0%
GACATAAAAGAAGTTAGTGG+TGG - chr7_2:60110248-60110267 Msa1066150:intron 35.0%
ATAAAAGAAGTTAGTGGTGG+AGG - chr7_2:60110251-60110270 Msa1066150:intron 35.0%
AACTCTCTTCTTCCATAACT+CGG + chr7_2:60110372-60110391 None:intergenic 35.0%
! CAATGATTGATGATCCAGTT+TGG - chr7_2:60110486-60110505 Msa1066150:intron 35.0%
ACAATATTCATGACCCAAAC+TGG + chr7_2:60110503-60110522 None:intergenic 35.0%
TTGGGTCATGAATATTGTTC+CGG - chr7_2:60110505-60110524 Msa1066150:intron 35.0%
TTAGGAACGGCTATTAGAAA+GGG + chr7_2:60110611-60110630 None:intergenic 35.0%
!! AAATGAGAGAGGTTTGCTAA+AGG - chr7_2:60110771-60110790 Msa1066150:intron 35.0%
GCTTTACACATTTCATCACA+TGG - chr7_2:60111169-60111188 Msa1066150:CDS 35.0%
TGTATAAAGTCATAGGTTCG+AGG + chr7_2:60111263-60111282 None:intergenic 35.0%
! TTCTCTTTTTACCCTCTATG+AGG - chr7_2:60111289-60111308 Msa1066150:CDS 35.0%
AATTTACCTGTCCTCATAGA+GGG + chr7_2:60111303-60111322 None:intergenic 35.0%
GTGTGACAGATGTAATATAG+AGG - chr7_2:60111425-60111444 Msa1066150:CDS 35.0%
ACATTCTTCTTGAGATGGAT+AGG - chr7_2:60111448-60111467 Msa1066150:CDS 35.0%
TTGAGATGGATAGGATATTG+AGG - chr7_2:60111457-60111476 Msa1066150:CDS 35.0%
ATTTGCAGATGCAATGCAAT+GGG - chr7_2:60111536-60111555 Msa1066150:CDS 35.0%
TAGAATTGCAGACCATGAAA+AGG - chr7_2:60111563-60111582 Msa1066150:CDS 35.0%
AGAATTGCAGACCATGAAAA+GGG - chr7_2:60111564-60111583 Msa1066150:CDS 35.0%
! AGTATCTTTTCTCTTTGGTG+TGG + chr7_2:60111591-60111610 None:intergenic 35.0%
! CTACGAGTATCTTTTCTCTT+TGG + chr7_2:60111596-60111615 None:intergenic 35.0%
!!! TTGATTTTGTTCAGGTTGTG+GGG + chr7_2:60111640-60111659 None:intergenic 35.0%
!!! GTTGATTTTGTTCAGGTTGT+GGG + chr7_2:60111641-60111660 None:intergenic 35.0%
!!! TGTTGATTTTGTTCAGGTTG+TGG + chr7_2:60111642-60111661 None:intergenic 35.0%
! TTTTCCAACCCCATTTATGT+GGG - chr7_2:60111766-60111785 Msa1066150:five_prime_UTR 35.0%
TGACCCCAAAAAATTGTTTG+GGG - chr7_2:60111826-60111845 Msa1066150:five_prime_UTR 35.0%
GAGAGAAAGAGGGTTTAGTT+TGG + chr7_2:60106900-60106919 None:intergenic 40.0%
GGAAGAAAGAGAGAGAAAGA+GGG + chr7_2:60106910-60106929 None:intergenic 40.0%
AGGAAGAAAGAGAGAGAAAG+AGG + chr7_2:60106911-60106930 None:intergenic 40.0%
GAGAAAGAGAAAGAAAAGGG+TGG + chr7_2:60107036-60107055 None:intergenic 40.0%
CGGAGAGAAAGAGAAAGAAA+AGG + chr7_2:60107040-60107059 None:intergenic 40.0%
! AGTCTTGAGAGAGGTTTGTT+GGG + chr7_2:60107118-60107137 None:intergenic 40.0%
AGAAAGTAGAGTCTTGAGAG+AGG + chr7_2:60107127-60107146 None:intergenic 40.0%
! AAAAAAGGTGCAGAGGATGA+TGG + chr7_2:60107158-60107177 None:intergenic 40.0%
!!! TGCACCTTTTTTTACCTCCT+TGG - chr7_2:60107166-60107185 Msa1066150:CDS 40.0%
! GTGGAGGTGAAATTAGTTTG+TGG + chr7_2:60107277-60107296 None:intergenic 40.0%
! ATCAAGAGTGATGGAAGAAG+TGG + chr7_2:60107302-60107321 None:intergenic 40.0%
! GGTGCGTACATTGATGATAT+CGG - chr7_2:60107694-60107713 Msa1066150:intron 40.0%
ACCATGAGCAGTAATGTGAT+TGG - chr7_2:60107922-60107941 Msa1066150:intron 40.0%
ACCAATCACATTACTGCTCA+TGG + chr7_2:60107926-60107945 None:intergenic 40.0%
GAGAATTGGAAAGGGAATGT+AGG - chr7_2:60108043-60108062 Msa1066150:intron 40.0%
TTCTTTCCTTAGTTGCTTCC+AGG - chr7_2:60108114-60108133 Msa1066150:intron 40.0%
AATCATTGTGCGAAACAGAC+GGG - chr7_2:60108217-60108236 Msa1066150:intron 40.0%
! GTTCAATTTGCTCTTGAACG+AGG - chr7_2:60109132-60109151 Msa1066150:CDS 40.0%
GCAATAACACCAATCAAAGC+TGG + chr7_2:60109162-60109181 None:intergenic 40.0%
CATGACTATTGTGTCGTGTT+TGG - chr7_2:60109318-60109337 Msa1066150:CDS 40.0%
!! GAGGGTATTGGATTCTATCA+GGG - chr7_2:60109459-60109478 Msa1066150:intron 40.0%
TATCAGGGCCACCAATAAAT+TGG - chr7_2:60109474-60109493 Msa1066150:intron 40.0%
ATCAGGGCCACCAATAAATT+GGG - chr7_2:60109475-60109494 Msa1066150:intron 40.0%
CAATGGCTCTCCCAATTTAT+TGG + chr7_2:60109488-60109507 None:intergenic 40.0%
CAATAAATTGGGAGAGCCAT+TGG - chr7_2:60109486-60109505 Msa1066150:intron 40.0%
ACAGACTTCAATTGAGAGAG+TGG - chr7_2:60109547-60109566 Msa1066150:intron 40.0%
GAGTGGCAAAAAGTCTTTGT+TGG - chr7_2:60109564-60109583 Msa1066150:intron 40.0%
AGAAGGGTGACATTGCAATA+TGG - chr7_2:60109600-60109619 Msa1066150:CDS 40.0%
! TAGACCCTTTTGTGATGCAA+AGG - chr7_2:60109676-60109695 Msa1066150:CDS 40.0%
GGATCCTTTGCATCACAAAA+GGG + chr7_2:60109683-60109702 None:intergenic 40.0%
AGGATCCTTTGCATCACAAA+AGG + chr7_2:60109684-60109703 None:intergenic 40.0%
GTATATTACCATGCTGAGTC+AGG + chr7_2:60109704-60109723 None:intergenic 40.0%
AAACTTCCACTGCTAATCCT+TGG + chr7_2:60110314-60110333 None:intergenic 40.0%
! AAGGATTAGCAGTGGAAGTT+TGG - chr7_2:60110313-60110332 Msa1066150:intron 40.0%
ATTAGCAGTGGAAGTTTGGA+TGG - chr7_2:60110317-60110336 Msa1066150:intron 40.0%
AGTAAATTACGGTATCTCCC+CGG + chr7_2:60110431-60110450 None:intergenic 40.0%
GATATGAATGCTTACATGGG+AGG - chr7_2:60110452-60110471 Msa1066150:intron 40.0%
! GTTTATGAACGCGGATTGAT+CGG - chr7_2:60110557-60110576 Msa1066150:intron 40.0%
TGATCGGAACATATCAGAAC+TGG - chr7_2:60110573-60110592 Msa1066150:intron 40.0%
GTTAGGAACGGCTATTAGAA+AGG + chr7_2:60110612-60110631 None:intergenic 40.0%
! TTTTTACCCTCTATGAGGAC+AGG - chr7_2:60111294-60111313 Msa1066150:CDS 40.0%
CAATTTACCTGTCCTCATAG+AGG + chr7_2:60111304-60111323 None:intergenic 40.0%
AGAGGACATTCTTCTTGAGA+TGG - chr7_2:60111443-60111462 Msa1066150:CDS 40.0%
ATAGGATATTGAGGCCACAA+GGG - chr7_2:60111466-60111485 Msa1066150:CDS 40.0%
! TGTGATATTGCGTGATGATG+TGG - chr7_2:60111491-60111510 Msa1066150:CDS 40.0%
! TGATGTGGATGTGTTGTTGA+AGG - chr7_2:60111506-60111525 Msa1066150:CDS 40.0%
GATTTGCAGATGCAATGCAA+TGG - chr7_2:60111535-60111554 Msa1066150:CDS 40.0%
! CTTTTCCAACCCCATTTATG+TGG - chr7_2:60111765-60111784 Msa1066150:five_prime_UTR 40.0%
TGCAAACCACCCACATAAAT+GGG + chr7_2:60111778-60111797 None:intergenic 40.0%
TTGCAAACCACCCACATAAA+TGG + chr7_2:60111779-60111798 None:intergenic 40.0%
!! AGGGTTTAGTTTGGACTGAG+GGG + chr7_2:60106891-60106910 None:intergenic 45.0%
!! GAGGGTTTAGTTTGGACTGA+GGG + chr7_2:60106892-60106911 None:intergenic 45.0%
!! AGAGGGTTTAGTTTGGACTG+AGG + chr7_2:60106893-60106912 None:intergenic 45.0%
CTTGTTTCATGAGAGTGACG+CGG + chr7_2:60106974-60106993 None:intergenic 45.0%
GAGTCTTGAGAGAGGTTTGT+TGG + chr7_2:60107119-60107138 None:intergenic 45.0%
! GGAGGTAAAAAAAGGTGCAG+AGG + chr7_2:60107165-60107184 None:intergenic 45.0%
GAGGCCAAGGAGGTAAAAAA+AGG + chr7_2:60107173-60107192 None:intergenic 45.0%
!!! TTTTTTACCTCCTTGGCCTC+TGG - chr7_2:60107173-60107192 Msa1066150:CDS 45.0%
! AAGAGTGATGGAAGAAGTGG+TGG + chr7_2:60107299-60107318 None:intergenic 45.0%
AGCGGTCGTTGAAATTTCCT+CGG - chr7_2:60107431-60107450 Msa1066150:intron 45.0%
TTATCGTGAGAGACACTGTC+CGG - chr7_2:60107465-60107484 Msa1066150:intron 45.0%
TAGCATACCAAGCCCAATCA+CGG + chr7_2:60107564-60107583 None:intergenic 45.0%
!! GGGTTCATTTTGAAGGTGAC+CGG - chr7_2:60107629-60107648 Msa1066150:intron 45.0%
!! ATTTTGAAGGTGACCGGTTC+AGG - chr7_2:60107635-60107654 Msa1066150:intron 45.0%
AGAAAAACGTACCCCACAAC+CGG + chr7_2:60107767-60107786 None:intergenic 45.0%
TTTCTTCAATCTCCCGGTTC+AGG - chr7_2:60107782-60107801 Msa1066150:intron 45.0%
GGTTCAAGAAAACCTGAACC+GGG + chr7_2:60107797-60107816 None:intergenic 45.0%
CGGTTCAAGAAAACCTGAAC+CGG + chr7_2:60107798-60107817 None:intergenic 45.0%
!! CGGTTCAGGTTTTCTTGAAC+CGG - chr7_2:60107796-60107815 Msa1066150:intron 45.0%
TTCAATGTCAATGAACCGGG+TGG - chr7_2:60107852-60107871 Msa1066150:intron 45.0%
ACGATTCCTGGAAGCAACTA+AGG + chr7_2:60108123-60108142 None:intergenic 45.0%
GACACTGCTAATATGTCACG+TGG + chr7_2:60109081-60109100 None:intergenic 45.0%
TGAGCTTCATGTGTGTCTCT+TGG + chr7_2:60109111-60109130 None:intergenic 45.0%
AGGGTAAGGAAGCCTAATTG+AGG + chr7_2:60109184-60109203 None:intergenic 45.0%
TCAAAGGCTCTTGAAGGGTA+AGG + chr7_2:60109198-60109217 None:intergenic 45.0%
CCATGTCAAAGGCTCTTGAA+GGG + chr7_2:60109203-60109222 None:intergenic 45.0%
TGAGCAATGAGCCATGTCAA+AGG + chr7_2:60109214-60109233 None:intergenic 45.0%
CTCACGTTGCCTAATTCCTT+GGG - chr7_2:60109230-60109249 Msa1066150:CDS 45.0%
TCACGTTGCCTAATTCCTTG+GGG - chr7_2:60109231-60109250 Msa1066150:CDS 45.0%
TATTTACCATTCTGGCCCCA+AGG + chr7_2:60109249-60109268 None:intergenic 45.0%
!! TTCGGTGTCTAACATGTGTC+AGG - chr7_2:60109282-60109301 Msa1066150:CDS 45.0%
! TCGGTGTCTAACATGTGTCA+GGG - chr7_2:60109283-60109302 Msa1066150:CDS 45.0%
GATAGAATCCAATACCCTCC+AGG + chr7_2:60109458-60109477 None:intergenic 45.0%
!! GGAGGGTATTGGATTCTATC+AGG - chr7_2:60109458-60109477 Msa1066150:intron 45.0%
TGGCTCTCCCAATTTATTGG+TGG + chr7_2:60109485-60109504 None:intergenic 45.0%
AATTGGGAGAGCCATTGGAA+AGG - chr7_2:60109491-60109510 Msa1066150:intron 45.0%
ATTGGGAGAGCCATTGGAAA+GGG - chr7_2:60109492-60109511 Msa1066150:intron 45.0%
TGTGATCTCGATTGTGAACG+CGG + chr7_2:60109781-60109800 None:intergenic 45.0%
! GCTTGCTGCCAAATAGAGTT+TGG - chr7_2:60109979-60109998 Msa1066150:intron 45.0%
ATGTTTGACACCACTTCCTG+AGG - chr7_2:60110220-60110239 Msa1066150:intron 45.0%
ATGTCAGATACCTCAGGAAG+TGG + chr7_2:60110233-60110252 None:intergenic 45.0%
! GGAACTGATGTTAGTCTCTC+AGG + chr7_2:60110290-60110309 None:intergenic 45.0%
GACTAACATCAGTTCCACCA+AGG - chr7_2:60110294-60110313 Msa1066150:intron 45.0%
TGATTATCAGCTAGCAGAGC+CGG - chr7_2:60110409-60110428 Msa1066150:intron 45.0%
CATGAATATTGTTCCGGTCC+AGG - chr7_2:60110511-60110530 Msa1066150:intron 45.0%
!! CTTGGTGTCGTTTATGAACG+CGG - chr7_2:60110548-60110567 Msa1066150:intron 45.0%
!!! ACTGCTTTTTGTCTCCACTC+AGG - chr7_2:60111216-60111235 Msa1066150:CDS 45.0%
GTCATAGGTTCGAGGATAAG+TGG + chr7_2:60111255-60111274 None:intergenic 45.0%
GATAGGATATTGAGGCCACA+AGG - chr7_2:60111465-60111484 Msa1066150:CDS 45.0%
!! TTTGGTGTGGTCCCTTTTCA+TGG + chr7_2:60111578-60111597 None:intergenic 45.0%
TCGTAGCAGTCAAGCAGTAT+TGG - chr7_2:60111610-60111629 Msa1066150:CDS 45.0%
GCAAACCACCCACATAAATG+GGG + chr7_2:60111777-60111796 None:intergenic 45.0%
!!! AACAAATAAATTATTTTTTT+TGG + chr7_2:60110114-60110133 None:intergenic 5.0%
! TAGTTTGTGGGCAATCAGGG+CGG + chr7_2:60107264-60107283 None:intergenic 50.0%
! AGTGATGGAAGAAGTGGTGG+TGG + chr7_2:60107296-60107315 None:intergenic 50.0%
GATAAACCGACGTCGCATAC+CGG + chr7_2:60107385-60107404 None:intergenic 50.0%
!! GGTATGCGACGTCGGTTTAT+CGG - chr7_2:60107384-60107403 Msa1066150:CDS 50.0%
ATCGGAGTATACTCCCTGTG+AGG - chr7_2:60107402-60107421 Msa1066150:intron 50.0%
GCGGTCGTTGAAATTTCCTC+GGG - chr7_2:60107432-60107451 Msa1066150:intron 50.0%
CGGAGAATCTCCTCTTTCTC+CGG + chr7_2:60107487-60107506 None:intergenic 50.0%
CGGAGAAAGAGGAGATTCTC+CGG - chr7_2:60107485-60107504 Msa1066150:intron 50.0%
AAGAGGAGATTCTCCGGTGT+CGG - chr7_2:60107491-60107510 Msa1066150:intron 50.0%
TTCGGACGGACCCATCTTTA+AGG + chr7_2:60107732-60107751 None:intergenic 50.0%
! AACCGGTGTCTAAAGCGGTT+CGG + chr7_2:60107750-60107769 None:intergenic 50.0%
! CGAGGAGTTCCAGCTTTGAT+TGG - chr7_2:60109150-60109169 Msa1066150:CDS 50.0%
CCCTTCAAGAGCCTTTGACA+TGG - chr7_2:60109200-60109219 Msa1066150:CDS 50.0%
GCCATGTCAAAGGCTCTTGA+AGG + chr7_2:60109204-60109223 None:intergenic 50.0%
GCTCACGTTGCCTAATTCCT+TGG - chr7_2:60109229-60109248 Msa1066150:CDS 50.0%
CATTCTGGCCCCAAGGAATT+AGG + chr7_2:60109242-60109261 None:intergenic 50.0%
CTAATTCCTTGGGGCCAGAA+TGG - chr7_2:60109240-60109259 Msa1066150:CDS 50.0%
! GTTGATAGAGTGCTACGTCC+TGG - chr7_2:60109437-60109456 Msa1066150:intron 50.0%
! ATAGAGTGCTACGTCCTGGA+GGG - chr7_2:60109441-60109460 Msa1066150:intron 50.0%
CAAAGGATCCTGACTCAGCA+TGG - chr7_2:60109693-60109712 Msa1066150:CDS 50.0%
! GTGGTGGAGGATTGTCGAAT+TGG - chr7_2:60110264-60110283 Msa1066150:intron 50.0%
! GTTCCACCAAGGATTAGCAG+TGG - chr7_2:60110305-60110324 Msa1066150:intron 50.0%
CTTCCACTGCTAATCCTTGG+TGG + chr7_2:60110311-60110330 None:intergenic 50.0%
GATTATCAGCTAGCAGAGCC+GGG - chr7_2:60110410-60110429 Msa1066150:intron 50.0%
ATTATCAGCTAGCAGAGCCG+GGG - chr7_2:60110411-60110430 Msa1066150:intron 50.0%
! CAAGTGTGTTGATCTCAGCC+TGG + chr7_2:60110532-60110551 None:intergenic 50.0%
CAGGCTGAGATCAACACACT+TGG - chr7_2:60110530-60110549 Msa1066150:intron 50.0%
GGTTCGAGGATAAGTGGACA+TGG + chr7_2:60111249-60111268 None:intergenic 50.0%
CGCAATATCACACTCCCTTG+TGG + chr7_2:60111483-60111502 None:intergenic 50.0%
TCCAACCCCATTTATGTGGG+TGG - chr7_2:60111769-60111788 Msa1066150:five_prime_UTR 50.0%
ACCACCCACATAAATGGGGT+TGG + chr7_2:60111773-60111792 None:intergenic 50.0%
! GGTGCAGAGGATGATGGTGA+AGG + chr7_2:60107152-60107171 None:intergenic 55.0%
! AGTTTTGCCAGAGGCCAAGG+AGG + chr7_2:60107183-60107202 None:intergenic 55.0%
! AGGAGTTTTGCCAGAGGCCA+AGG + chr7_2:60107186-60107205 None:intergenic 55.0%
! TGGTGGAGGAGTTTTGCCAG+AGG + chr7_2:60107192-60107211 None:intergenic 55.0%
GTGATTGTTGCCGGAGATGG+CGG + chr7_2:60107224-60107243 None:intergenic 55.0%
GTGGTGATTGTTGCCGGAGA+TGG + chr7_2:60107227-60107246 None:intergenic 55.0%
GGTGGAGTGGTGATTGTTGC+CGG + chr7_2:60107233-60107252 None:intergenic 55.0%
!! GATGGAAGAAGTGGTGGTGG+AGG + chr7_2:60107293-60107312 None:intergenic 55.0%
GAGACACTGTCCGGAGAAAG+AGG - chr7_2:60107474-60107493 Msa1066150:intron 55.0%
! GATTCTCCGGTGTCGGATAC+CGG - chr7_2:60107498-60107517 Msa1066150:intron 55.0%
TGTCGGATACCGGCACCATA+TGG - chr7_2:60107508-60107527 Msa1066150:intron 55.0%
CACCACCAGGAAACCTGAAC+CGG + chr7_2:60107651-60107670 None:intergenic 55.0%
! GGTTCAGGTTTCCTGGTGGT+GGG - chr7_2:60107650-60107669 Msa1066150:intron 55.0%
! GGTGTCTAAAGCGGTTCGGA+CGG + chr7_2:60107746-60107765 None:intergenic 55.0%
! GTCCGAACCGCTTTAGACAC+CGG - chr7_2:60107745-60107764 Msa1066150:intron 55.0%
! ACCGCTTTAGACACCGGTTG+TGG - chr7_2:60107751-60107770 Msa1066150:intron 55.0%
CCCACAACCGGTGTCTAAAG+CGG + chr7_2:60107755-60107774 None:intergenic 55.0%
! CCGCTTTAGACACCGGTTGT+GGG - chr7_2:60107752-60107771 Msa1066150:intron 55.0%
! CGCTTTAGACACCGGTTGTG+GGG - chr7_2:60107753-60107772 Msa1066150:intron 55.0%
TAGAGGGGAAGTGAACCACC+CGG + chr7_2:60107870-60107889 None:intergenic 55.0%
GGTGGTTCACTTCCCCTCTA+TGG - chr7_2:60107870-60107889 Msa1066150:intron 55.0%
! GATAGAGTGCTACGTCCTGG+AGG - chr7_2:60109440-60109459 Msa1066150:intron 55.0%
! TGCTACGTCCTGGAGGGTAT+TGG - chr7_2:60109447-60109466 Msa1066150:intron 55.0%
GGAGAGCCATTGGAAAGGGT+GGG - chr7_2:60109496-60109515 Msa1066150:intron 55.0%
TCCTCTCCCACCCTTTCCAA+TGG + chr7_2:60109505-60109524 None:intergenic 55.0%
! GTGTTGATCTCAGCCTGGAC+CGG + chr7_2:60110527-60110546 None:intergenic 55.0%
GACATGGCTTCACACCTGAG+TGG + chr7_2:60111233-60111252 None:intergenic 55.0%
! ATTGTTGCCGGAGATGGCGG+CGG + chr7_2:60107221-60107240 None:intergenic 60.0%
!! ATCAGGGCGGATGATGGTGG+TGG + chr7_2:60107251-60107270 None:intergenic 60.0%
! GCAATCAGGGCGGATGATGG+TGG + chr7_2:60107254-60107273 None:intergenic 60.0%
TGGGCAATCAGGGCGGATGA+TGG + chr7_2:60107257-60107276 None:intergenic 60.0%
!! ATGGTGCCGGTATCCGACAC+CGG + chr7_2:60107507-60107526 None:intergenic 60.0%
ACGCGGTAGCCATATGGTGC+CGG + chr7_2:60107520-60107539 None:intergenic 60.0%
GTGGCCTGAGAGCCGTGATT+GGG - chr7_2:60107549-60107568 Msa1066150:CDS 60.0%
CAAGCCCAATCACGGCTCTC+AGG + chr7_2:60107556-60107575 None:intergenic 60.0%
CTGAGAGCCGTGATTGGGCT+TGG - chr7_2:60107554-60107573 Msa1066150:CDS 60.0%
! GGTGACCGGTTCAGGTTTCC+TGG - chr7_2:60107643-60107662 Msa1066150:intron 60.0%
! GACCGGTTCAGGTTTCCTGG+TGG - chr7_2:60107646-60107665 Msa1066150:intron 60.0%
! CGGTTCAGGTTTCCTGGTGG+TGG - chr7_2:60107649-60107668 Msa1066150:intron 60.0%
GGAAACATGGTCCCACCACC+AGG + chr7_2:60107664-60107683 None:intergenic 60.0%
GGTGGGACCATGTTTCCACG+TGG - chr7_2:60107667-60107686 Msa1066150:intron 60.0%
ACCATGTTTCCACGTGGCGC+TGG - chr7_2:60107673-60107692 Msa1066150:intron 60.0%
ACCAGCGCCACGTGGAAACA+TGG + chr7_2:60107677-60107696 None:intergenic 60.0%
GGGAGAGCCATTGGAAAGGG+TGG - chr7_2:60109495-60109514 Msa1066150:intron 60.0%
GCCATTGGAAAGGGTGGGAG+AGG - chr7_2:60109501-60109520 Msa1066150:intron 60.0%
!! GGCGGATGATGGTGGTGGAG+TGG + chr7_2:60107246-60107265 None:intergenic 65.0%
! CTGCGGATTCTGGTGGGTCG+GGG + chr7_2:60107345-60107364 None:intergenic 65.0%
! GCTGCGGATTCTGGTGGGTC+GGG + chr7_2:60107346-60107365 None:intergenic 65.0%
! CGCTGCGGATTCTGGTGGGT+CGG + chr7_2:60107347-60107366 None:intergenic 65.0%
CACGCGCTGCGGATTCTGGT+GGG + chr7_2:60107351-60107370 None:intergenic 65.0%
ACACGCGCTGCGGATTCTGG+TGG + chr7_2:60107352-60107371 None:intergenic 65.0%
GTCACACGCGCTGCGGATTC+TGG + chr7_2:60107355-60107374 None:intergenic 65.0%
CGCGTTAGTCACACGCGCTG+CGG + chr7_2:60107362-60107381 None:intergenic 65.0%
AGCGCGTGTGACTAACGCGC+CGG - chr7_2:60107363-60107382 Msa1066150:CDS 65.0%
! AACGCGCCGGTATGCGACGT+CGG - chr7_2:60107376-60107395 Msa1066150:CDS 65.0%
CTCCCTGTGAGGACGTGCAG+CGG - chr7_2:60107413-60107432 Msa1066150:intron 65.0%
GACCGCTGCACGTCCTCACA+GGG + chr7_2:60107418-60107437 None:intergenic 65.0%
GGCGGAACGCGGTAGCCATA+TGG + chr7_2:60107526-60107545 None:intergenic 65.0%
GGTGGCCTGAGAGCCGTGAT+TGG - chr7_2:60107548-60107567 Msa1066150:CDS 65.0%
ATGTACGCACCAGCGCCACG+TGG + chr7_2:60107685-60107704 None:intergenic 65.0%
AGGGTGGGAGAGGACTCGTG+AGG - chr7_2:60109511-60109530 Msa1066150:intron 65.0%
ACCACCTCCGCCGCCATCTC+CGG - chr7_2:60107211-60107230 Msa1066150:CDS 70.0%
CGACCGCTGCACGTCCTCAC+AGG + chr7_2:60107419-60107438 None:intergenic 70.0%
ATGGCTACCGCGTTCCGCCG+CGG - chr7_2:60107527-60107546 Msa1066150:CDS 70.0%
TCACGGCTCTCAGGCCACCG+CGG + chr7_2:60107547-60107566 None:intergenic 70.0%
! GATGGCGGCGGAGGTGGTGG+TGG + chr7_2:60107209-60107228 None:intergenic 75.0%
! GGAGATGGCGGCGGAGGTGG+TGG + chr7_2:60107212-60107231 None:intergenic 75.0%
! GTTGCCGGAGATGGCGGCGG+AGG + chr7_2:60107218-60107237 None:intergenic 75.0%
!!! GGCGGCGGAGGTGGTGGTGG+AGG + chr7_2:60107206-60107225 None:intergenic 80.0%
!! GCCGGAGATGGCGGCGGAGG+TGG + chr7_2:60107215-60107234 None:intergenic 80.0%
! GCTACCGCGTTCCGCCGCGG+TGG - chr7_2:60107530-60107549 Msa1066150:CDS 80.0%
! CAGGCCACCGCGGCGGAACG+CGG + chr7_2:60107537-60107556 None:intergenic 80.0%
! CGGCTCTCAGGCCACCGCGG+CGG + chr7_2:60107544-60107563 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 60106879 60111961 60106879 ID=Msa1066150;Name=Msa1066150
chr7_2 mRNA 60106879 60111961 60106879 ID=Msa1066150-mRNA-1;Parent=Msa1066150;Name=Msa1066150-mRNA-1;_AED=0.04;_eAED=0.04;_QI=200|1|1|1|1|1|6|287|638
chr7_2 exon 60106879 60107406 60106879 ID=Msa1066150-mRNA-1:exon:11719;Parent=Msa1066150-mRNA-1
chr7_2 exon 60107525 60107602 60107525 ID=Msa1066150-mRNA-1:exon:11718;Parent=Msa1066150-mRNA-1
chr7_2 exon 60108246 60108638 60108246 ID=Msa1066150-mRNA-1:exon:11717;Parent=Msa1066150-mRNA-1
chr7_2 exon 60109126 60109423 60109126 ID=Msa1066150-mRNA-1:exon:11716;Parent=Msa1066150-mRNA-1
chr7_2 exon 60109579 60109789 60109579 ID=Msa1066150-mRNA-1:exon:11715;Parent=Msa1066150-mRNA-1
chr7_2 exon 60111066 60111961 60111066 ID=Msa1066150-mRNA-1:exon:11714;Parent=Msa1066150-mRNA-1
chr7_2 five_prime_UTR 60111762 60111961 60111762 ID=Msa1066150-mRNA-1:five_prime_utr;Parent=Msa1066150-mRNA-1
chr7_2 CDS 60111066 60111761 60111066 ID=Msa1066150-mRNA-1:cds;Parent=Msa1066150-mRNA-1
chr7_2 CDS 60109579 60109789 60109579 ID=Msa1066150-mRNA-1:cds;Parent=Msa1066150-mRNA-1
chr7_2 CDS 60109126 60109423 60109126 ID=Msa1066150-mRNA-1:cds;Parent=Msa1066150-mRNA-1
chr7_2 CDS 60108246 60108638 60108246 ID=Msa1066150-mRNA-1:cds;Parent=Msa1066150-mRNA-1
chr7_2 CDS 60107525 60107602 60107525 ID=Msa1066150-mRNA-1:cds;Parent=Msa1066150-mRNA-1
chr7_2 CDS 60107166 60107406 60107166 ID=Msa1066150-mRNA-1:cds;Parent=Msa1066150-mRNA-1
chr7_2 three_prime_UTR 60106879 60107165 60106879 ID=Msa1066150-mRNA-1:three_prime_utr;Parent=Msa1066150-mRNA-1
Gene Sequence

>Msa1066150

ATGGCTAATTCTTTCTTATCAATTTTCAACAAGAAACCCAACAAACCTCTCTCAAGACTCTACTTTCTCACCTTCACCATCATCCTCTGCACCTTTTTTTACCTCCTTGGCCTCTGGCAAAACTCCTCCACCACCACCTCCGCCGCCATCTCCGGCAACAATCACCACTCCACCACCATCATCCGCCCTGATTGCCCACAAACTAATTTCACCTCCACCACCACTTCTTCCATCACTCTTGATTTTTCAGCACATCATAACGTCCCCGACCCACCAGAATCCGCAGCGCGTGTGACTAACGCGCCGGTATGCGACGTCGGTTTATCGGAGTATACTCCCTGTGAGGACGTGCAGCGGTCGTTGAAATTTCCTCGGGAGAATTTAATTTATCGTGAGAGACACTGTCCGGAGAAAGAGGAGATTCTCCGGTGTCGGATACCGGCACCATATGGCTACCGCGTTCCGCCGCGGTGGCCTGAGAGCCGTGATTGGGCTTGGTATGCTAATGTGCCACATAAAGAATTGACGATTGAGAAAAAAAACCAGAATTGGGTTCATTTTGAAGGTGACCGGTTCAGGTTTCCTGGTGGTGGGACCATGTTTCCACGTGGCGCTGGTGCGTACATTGATGATATCGGAAAGCTCATCAACCTTAAAGATGGGTCCGTCCGAACCGCTTTAGACACCGGTTGTGGGGTTGCAAGTTGGGGAGCATATCTTTTGCCACGTGACATATTAGCAGTGTCATTTGCACCAAGAGACACACATGAAGCTCAAGTTCAATTTGCTCTTGAACGAGGAGTTCCAGCTTTGATTGGTGTTATTGCCTCAATTAGGCTTCCTTACCCTTCAAGAGCCTTTGACATGGCTCATTGCTCACGTTGCCTAATTCCTTGGGGCCAGAATGATGGAATTTATTTAACTGAAGTTGATAGAGTGCTACGTCCTGGAGGGTATTGGATTCTATCAGGGCCACCAATAAATTGGGAGAGCCATTGGAAAGGGTGGGAGAGGACTCGTGAGGATCTAAATGCTGAACAGACTTCAATTGAGAGAGTGGCAAAAAGTCTTTGTTGGAAAAAACTAGTTCAGAAGGGTGACATTGCAATATGGCAAAAGCCTACTAATCATATTCATTGCAAAATAACAAGAAAGGTCTTCAAGAATAGACCCTTTTGTGATGCAAAGGATCCTGACTCAGCATGGTACACCAAAATGGATACATGTTTGACACCACTTCCTGAGGTATCTGACATAAAAGAAGTTAGTGGTGGAGGATTGTCGAATTGGCCTGAGAGACTAACATCAGTTCCACCAAGGATTAGCAGTGGAAGTTTGGATGGAATCACAGCTGAGATGTTCAAAGAAAATACCGAGTTATGGAAGAAGAGAGTTGCATACTACAAGACACTTGATTATCAGCTAGCAGAGCCGGGGAGATACCGTAATTTACTTGATATGAATGCTTACATGGGAGGATTTGCAGCTGCAATGATTGATGATCCAGTTTGGGTCATGAATATTGTTCCGGTCCAGGCTGAGATCAACACACTTGGTGTCGTTTATGAACGCGGATTGATCGGAACATATCAGAACTGGTGTGAAGCCATGTCCACTTATCCTCGAACCTATGACTTTATACATGCTGATTCTCTTTTTACCCTCTATGAGGACAGATGTAATATAGAGGACATTCTTCTTGAGATGGATAGGATATTGAGGCCACAAGGGAGTGTGATATTGCGTGATGATGTGGATGTGTTGTTGAAGGTAAAAAGATTTGCAGATGCAATGCAATGGGATGCTAGAATTGCAGACCATGAAAAGGGACCACACCAAAGAGAAAAGATACTCGTAGCAGTCAAGCAGTATTGGACAGCCCCACAACCTGAACAAAATCAACAAAGAAAGTTATAA
Protein sequence

>Msa1066150

MANSFLSIFNKKPNKPLSRLYFLTFTIILCTFFYLLGLWQNSSTTTSAAISGNNHHSTTIIRPDCPQTNFTSTTTSSITLDFSAHHNVPDPPESAARVTNAPVCDVGLSEYTPCEDVQRSLKFPRENLIYRERHCPEKEEILRCRIPAPYGYRVPPRWPESRDWAWYANVPHKELTIEKKNQNWVHFEGDRFRFPGGGTMFPRGAGAYIDDIGKLINLKDGSVRTALDTGCGVASWGAYLLPRDILAVSFAPRDTHEAQVQFALERGVPALIGVIASIRLPYPSRAFDMAHCSRCLIPWGQNDGIYLTEVDRVLRPGGYWILSGPPINWESHWKGWERTREDLNAEQTSIERVAKSLCWKKLVQKGDIAIWQKPTNHIHCKITRKVFKNRPFCDAKDPDSAWYTKMDTCLTPLPEVSDIKEVSGGGLSNWPERLTSVPPRISSGSLDGITAEMFKENTELWKKRVAYYKTLDYQLAEPGRYRNLLDMNAYMGGFAAAMIDDPVWVMNIVPVQAEINTLGVVYERGLIGTYQNWCEAMSTYPRTYDFIHADSLFTLYEDRCNIEDILLEMDRILRPQGSVILRDDVDVLLKVKRFADAMQWDARIADHEKGPHQREKILVAVKQYWTAPQPEQNQQRKL*