AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1225890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225890 MtrunA17_Chr7g0246701 96.082 638 25 0 1 638 1 638 0.0 1295
Msa1225890 MtrunA17_Chr8g0350391 74.882 633 155 4 4 633 7 638 0.0 1008
Msa1225890 MtrunA17_Chr6g0472571 63.550 631 215 6 7 633 15 634 0.0 852
Msa1225890 MtrunA17_Chr1g0203741 62.698 630 219 7 1 626 1 618 0.0 832
Msa1225890 MtrunA17_Chr8g0388881 58.880 625 234 6 18 634 20 629 0.0 773
Msa1225890 MtrunA17_Chr4g0055031 56.661 623 243 7 10 627 5 605 0.0 739
Msa1225890 MtrunA17_Chr8g0361791 55.172 609 246 6 23 627 17 602 0.0 715
Msa1225890 MtrunA17_Chr5g0416991 53.571 616 255 7 18 627 11 601 0.0 688
Msa1225890 MtrunA17_Chr3g0092501 51.929 622 263 7 10 627 10 599 0.0 662
Msa1225890 MtrunA17_Chr7g0214551 52.075 530 248 3 95 619 37 565 0.0 613
Msa1225890 MtrunA17_Chr8g0369481 50.566 530 248 10 102 627 71 590 1.04e-180 525
Msa1225890 MtrunA17_Chr5g0409411 44.937 632 297 17 12 636 11 598 7.48e-172 502
Msa1225890 MtrunA17_Chr8g0350351 44.465 542 271 10 93 626 82 601 1.40e-167 491
Msa1225890 MtrunA17_Chr7g0246681 46.981 530 253 9 104 625 78 587 5.69e-167 489
Msa1225890 MtrunA17_Chr1g0183721 41.840 576 297 12 69 629 37 589 1.03e-155 461
Msa1225890 MtrunA17_Chr3g0112341 44.633 531 265 13 103 623 155 666 6.41e-152 454
Msa1225890 MtrunA17_Chr1g0167381 45.117 512 253 10 102 601 93 588 6.29e-150 447
Msa1225890 MtrunA17_Chr1g0187601 43.542 542 273 12 102 627 92 616 1.08e-146 439
Msa1225890 MtrunA17_Chr5g0435751 38.804 652 294 20 25 622 17 617 1.47e-143 431
Msa1225890 MtrunA17_Chr1g0159741 42.669 532 274 14 105 624 146 658 3.37e-140 423
Msa1225890 MtrunA17_Chr3g0130381 40.067 599 310 21 56 631 210 782 3.26e-132 407
Msa1225890 MtrunA17_Chr1g0171781 36.467 617 339 13 27 626 24 604 1.35e-129 394
Msa1225890 MtrunA17_Chr5g0437501 36.076 632 337 22 21 625 14 605 1.85e-127 389
Msa1225890 MtrunA17_Chr8g0384431 39.892 554 293 17 69 602 254 787 2.15e-127 395
Msa1225890 MtrunA17_Chr3g0113981 39.474 532 277 14 110 630 175 672 8.65e-127 389
Msa1225890 MtrunA17_Chr3g0125511 40.374 535 277 18 109 625 232 742 2.92e-125 388
Msa1225890 MtrunA17_Chr8g0372471 39.483 542 279 16 103 625 379 890 1.95e-121 382
Msa1225890 MtrunA17_Chr1g0155141 34.659 528 294 16 111 625 210 699 3.53e-92 300
Msa1225890 MtrunA17_Chr3g0115931 30.745 644 363 20 20 625 90 688 3.46e-90 294
Msa1225890 MtrunA17_Chr5g0426281 29.624 638 368 22 20 625 82 670 1.50e-87 286
Msa1225890 MtrunA17_Chr5g0404771 47.679 237 103 6 103 327 321 548 5.04e-67 229
Msa1225890 MtrunA17_Chr4g0043121 29.929 421 257 12 1 411 5 397 3.48e-53 188
Msa1225890 MtrunA17_Chr5g0404761 33.566 286 160 11 353 625 4 272 1.15e-45 163
Msa1225890 MtrunA17_Chr4g0043131 43.151 146 77 4 482 624 40 182 1.13e-33 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225890 AT2G45750.1 68.971 622 179 4 18 635 14 625 0.0 921
Msa1225890 AT4G00750.1 68.297 634 183 6 4 633 11 630 0.0 918
Msa1225890 AT4G10440.1 60.267 599 230 3 29 627 28 618 0.0 777
Msa1225890 AT1G33170.1 57.643 628 241 5 19 628 17 637 0.0 774
Msa1225890 AT1G26850.2 56.650 609 244 5 22 627 19 610 0.0 727
Msa1225890 AT1G26850.1 56.650 609 244 5 22 627 19 610 0.0 727
Msa1225890 AT4G18030.1 56.260 615 248 8 14 627 11 605 0.0 705
Msa1225890 AT2G43200.2 52.500 520 241 4 102 620 92 606 0.0 584
Msa1225890 AT2G43200.1 52.500 520 241 4 102 620 92 606 0.0 584
Msa1225890 AT1G26850.3 54.183 502 210 5 22 520 19 503 0.0 564
Msa1225890 AT1G31850.1 46.154 624 298 13 10 627 7 598 0.0 540
Msa1225890 AT1G31850.2 46.154 624 298 13 10 627 7 598 0.0 540
Msa1225890 AT1G31850.4 46.154 624 298 13 10 627 7 598 0.0 540
Msa1225890 AT1G31850.3 46.154 624 298 13 10 627 7 598 0.0 540
Msa1225890 AT4G19120.1 48.295 528 261 9 104 627 73 592 2.74e-177 517
Msa1225890 AT4G19120.2 48.295 528 261 9 104 627 73 592 2.74e-177 517
Msa1225890 AT4G00740.1 46.435 547 259 13 93 628 73 596 3.82e-168 493
Msa1225890 AT4G00740.2 46.435 547 259 13 93 628 73 596 3.82e-168 493
Msa1225890 AT1G04430.1 41.319 576 301 11 81 635 64 623 2.04e-151 451
Msa1225890 AT1G04430.3 41.319 576 301 11 81 635 64 623 2.04e-151 451
Msa1225890 AT1G04430.2 41.319 576 301 11 81 635 64 623 2.04e-151 451
Msa1225890 AT2G39750.1 42.620 542 280 13 93 623 169 690 3.04e-149 448
Msa1225890 AT4G19120.3 49.539 434 208 8 104 533 73 499 5.35e-147 436
Msa1225890 AT4G14360.1 44.727 512 255 10 102 601 77 572 9.00e-147 439
Msa1225890 AT4G14360.2 44.727 512 255 10 102 601 77 572 9.00e-147 439
Msa1225890 AT3G23300.2 42.620 542 281 11 102 629 80 605 9.11e-146 436
Msa1225890 AT3G23300.1 42.620 542 281 11 102 629 80 605 9.11e-146 436
Msa1225890 AT5G06050.1 41.667 552 287 15 90 627 136 666 2.57e-145 437
Msa1225890 AT5G14430.1 41.734 623 313 18 25 628 16 607 8.86e-145 434
Msa1225890 AT1G77260.1 42.726 543 278 14 92 623 134 654 4.16e-143 431
Msa1225890 AT5G14430.2 41.413 623 315 18 25 628 16 607 1.16e-142 428
Msa1225890 AT5G04060.1 40.146 548 287 12 92 626 79 598 6.76e-133 403
Msa1225890 AT3G10200.1 40.556 540 281 14 103 626 74 589 1.38e-131 399
Msa1225890 AT2G40280.1 41.155 537 262 17 110 631 90 587 1.74e-130 396
Msa1225890 AT1G29470.1 37.138 622 339 19 37 634 173 766 6.97e-129 398
Msa1225890 AT1G29470.2 37.138 622 339 19 37 634 173 766 6.97e-129 398
Msa1225890 AT3G56080.1 41.210 529 264 16 110 625 114 608 7.19e-129 393
Msa1225890 AT2G34300.2 40.472 551 286 16 103 637 242 766 4.32e-128 396
Msa1225890 AT2G34300.3 40.472 551 286 16 103 637 242 766 4.32e-128 396
Msa1225890 AT2G34300.1 40.472 551 286 16 103 637 242 766 4.32e-128 396
Msa1225890 AT5G64030.1 39.479 537 276 16 110 625 308 816 1.95e-125 390
Msa1225890 AT3G51070.1 40.183 545 278 19 109 634 380 895 1.69e-124 390
Msa1225890 AT3G10200.2 40.110 546 275 15 103 620 74 595 2.91e-123 378
Msa1225890 AT3G56080.2 42.765 463 226 15 110 559 114 550 6.58e-115 355
Msa1225890 AT3G51070.2 41.239 468 238 16 109 559 380 827 3.75e-107 343
Msa1225890 AT1G19430.1 35.417 528 291 16 111 625 232 722 4.06e-94 306
Msa1225890 AT1G19430.3 35.417 528 291 16 111 625 232 722 4.06e-94 306
Msa1225890 AT1G13860.4 33.333 549 302 15 97 614 77 592 1.22e-90 293
Msa1225890 AT1G13860.3 33.333 549 302 15 97 614 77 592 1.22e-90 293
Msa1225890 AT1G13860.1 33.333 549 302 15 97 614 77 592 1.22e-90 293
Msa1225890 AT1G13860.5 33.333 549 302 15 97 614 77 592 1.22e-90 293
Msa1225890 AT1G78240.1 33.514 555 310 17 104 624 149 678 3.87e-89 291
Msa1225890 AT1G78240.2 33.514 555 310 17 104 624 149 678 3.87e-89 291
Msa1225890 AT2G03480.2 32.616 558 303 15 95 624 80 592 1.24e-87 285
Msa1225890 AT2G03480.1 32.258 558 316 16 95 624 80 603 3.93e-84 276
Msa1225890 AT1G13860.2 34.430 456 249 13 187 614 3 436 3.12e-79 258
Msa1225890 AT1G19430.2 33.333 396 220 13 111 494 232 595 9.27e-54 194
Msa1225890 AT2G03480.3 30.581 327 208 6 95 411 80 397 3.62e-46 169

Find 217 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAAATGAACCCAATTT+TGG 0.133779 8_1:-91448481 None:intergenic
TTGCAAACCACCCACATAAA+TGG 0.193676 8_1:-91452656 None:intergenic
TATCAGGGCCACCAATAAAT+TGG 0.228314 8_1:+91450327 Msa1225890:CDS
CAATGGCTCTCCCAATTTAT+TGG 0.228514 8_1:-91450338 None:intergenic
TTCGGACGGACCCATCTTTA+AGG 0.233056 8_1:-91448589 None:intergenic
TTTGACAACTTTGTAATTGA+TGG 0.245277 8_1:-91452734 None:intergenic
CATTCTGGCCCCAAGGAATT+AGG 0.252109 8_1:-91450152 None:intergenic
GTCACACGCGCTGCGGATTC+TGG 0.263634 8_1:-91448212 None:intergenic
GAGAGAAAGAGGGTTTAGTT+TGG 0.291150 8_1:-91447759 None:intergenic
CAAGGATATATTTACCATTC+TGG 0.298743 8_1:-91450167 None:intergenic
CTCACGTTGCCTAATTCCTT+GGG 0.309107 8_1:+91450143 Msa1225890:CDS
AAGGATTAGCAGTGGAAGTT+TGG 0.319848 8_1:+91451201 Msa1225890:CDS
TGTCAAACATGTATCCATTT+TGG 0.323300 8_1:-91451095 None:intergenic
GGAGGGTATTGGATTCTATC+AGG 0.324275 8_1:+91450311 Msa1225890:CDS
TGCAAACCACCCACATAAAT+GGG 0.324448 8_1:-91452655 None:intergenic
GGTGACCGGTTCAGGTTTCC+TGG 0.324820 8_1:+91448503 Msa1225890:CDS
GTGGGTCGGGGACGTTATGA+TGG 0.342914 8_1:-91448190 None:intergenic
AATTAATCAGGTTGCAAGTT+GGG 0.358924 8_1:+91449954 Msa1225890:intron
GCTGCGGATTCTGGTGGGTC+GGG 0.359022 8_1:-91448203 None:intergenic
ACAATATTCATGACCCAAAC+TGG 0.359706 8_1:-91451388 None:intergenic
GATGGCGGCGGAGGTGGTGG+TGG 0.359751 8_1:-91448066 None:intergenic
TTGCAATGAATATGATTAGT+AGG 0.361054 8_1:-91450482 None:intergenic
AGGAAGAAAGAGAGAGAAAG+AGG 0.367208 8_1:-91447770 None:intergenic
GCTCACGTTGCCTAATTCCT+TGG 0.368109 8_1:+91450142 Msa1225890:CDS
GGTGGCCTGAGAGCCGTGAT+TGG 0.371034 8_1:+91448408 Msa1225890:CDS
AAAGAATTAGCCATTGTTGT+TGG 0.377603 8_1:-91447930 None:intergenic
CAATGATTGATGATCCAGTT+TGG 0.380101 8_1:+91451374 Msa1225890:CDS
AGTCTTGAGAGAGGTTTGTT+GGG 0.382054 8_1:-91447975 None:intergenic
GAGTCTTGAGAGAGGTTTGT+TGG 0.382542 8_1:-91447976 None:intergenic
GCCGGAGATGGCGGCGGAGG+TGG 0.383733 8_1:-91448072 None:intergenic
AAATTAGTTTGTGGGCAATC+AGG 0.386232 8_1:-91448125 None:intergenic
GGCGGCGGAGGTGGTGGTGG+AGG 0.387506 8_1:-91448063 None:intergenic
ACCGCTTTAGACACCGGTTG+TGG 0.389827 8_1:+91448611 Msa1225890:CDS
CGAGGAGTTCCAGCTTTGAT+TGG 0.389949 8_1:+91450063 Msa1225890:CDS
CGGAGAGAAAGAGAAAGAAA+AGG 0.393918 8_1:-91447897 None:intergenic
TTGGGTCATGAATATTGTTC+CGG 0.398019 8_1:+91451393 Msa1225890:CDS
GTGGTGGAGGATTGTCCAAT+TGG 0.413518 8_1:+91451152 Msa1225890:CDS
ACTTGATATGAATGCTTACA+TGG 0.416586 8_1:+91451336 Msa1225890:CDS
CGGTTCAGGTTTCCTGGTGG+TGG 0.418362 8_1:+91448509 Msa1225890:CDS
GGAGATGGCGGCGGAGGTGG+TGG 0.420969 8_1:-91448069 None:intergenic
GGTATGTGACGTCGGTTTAT+CGG 0.428548 8_1:+91448244 Msa1225890:CDS
GGAACTGATGTTAGTCTCTC+AGG 0.432324 8_1:-91451175 None:intergenic
AAACTCATCAACCTTAAAGA+TGG 0.440201 8_1:+91448578 Msa1225890:CDS
CAATAAATTGGGAGAGCCAT+TGG 0.441065 8_1:+91450339 Msa1225890:CDS
AGGATCCTTTGCATCACAAA+AGG 0.443703 8_1:-91450534 None:intergenic
TGTTAGTCTCTCAGGCCAAT+TGG 0.446702 8_1:-91451167 None:intergenic
TCAATCGTCAATTCTTTATG+TGG 0.449181 8_1:-91448449 None:intergenic
CGCTGCGGATTCTGGTGGGT+CGG 0.450044 8_1:-91448204 None:intergenic
GGCGGAATGCGGTAGCCATA+TGG 0.458498 8_1:-91448383 None:intergenic
GTATATTACCATGCTGAGTC+AGG 0.460310 8_1:-91450554 None:intergenic
GGAGAGAAAGAGAAAGAAAA+GGG 0.460567 8_1:-91447896 None:intergenic
GGTGCATACATTGATGATAT+CGG 0.460690 8_1:+91448554 Msa1225890:CDS
TGATTATCAGCTAGCAGAGC+CGG 0.461365 8_1:+91451297 Msa1225890:CDS
CATTCATATCAAGTAAATTA+CGG 0.462099 8_1:-91451327 None:intergenic
TGCTACGTCCTGGAGGGTAT+TGG 0.462923 8_1:+91450300 Msa1225890:CDS
AGAAGGGTGACATTGCAATA+TGG 0.465380 8_1:+91450453 Msa1225890:CDS
ATCAGCATGTATAAAGTCAT+AGG 0.466475 8_1:-91452148 None:intergenic
CTGAGAGCCGTGATTGGGCT+TGG 0.467893 8_1:+91448414 Msa1225890:CDS
ATCAGGGCCACCAATAAATT+GGG 0.468994 8_1:+91450328 Msa1225890:CDS
TCCAACCCCATTTATGTGGG+TGG 0.470520 8_1:+91452649 Msa1225890:three_prime_UTR
GTGGCCTGAGAGCCGTGATT+GGG 0.470858 8_1:+91448409 Msa1225890:CDS
CATGAATATTGTTCCGGTCC+AGG 0.471627 8_1:+91451399 Msa1225890:CDS
ACCACCTCCGCCGCCATCTC+CGG 0.471918 8_1:+91448071 Msa1225890:CDS
TCAAAGAAAATACCGAGTTA+TGG 0.474678 8_1:+91451245 Msa1225890:CDS
GAGGGTTTAGTTTGGACTGA+GGG 0.476226 8_1:-91447751 None:intergenic
ACGTATATATAGAGAGAGAA+AGG 0.476648 8_1:-91447794 None:intergenic
GATTCTCCGGTGTCGGATAC+CGG 0.478052 8_1:+91448358 Msa1225890:CDS
GATTATCAGCTAGCAGAGCC+GGG 0.479427 8_1:+91451298 Msa1225890:CDS
GCCATGTCAAAGGCTCTTGA+AGG 0.481184 8_1:-91450114 None:intergenic
GCCATTGGAAAGGGTGGGAG+AGG 0.486448 8_1:+91450354 Msa1225890:CDS
GGTGGAGTGGTGATTATTGC+CGG 0.486771 8_1:-91448090 None:intergenic
TGATCGGAACATATCAGAAC+TGG 0.488249 8_1:+91451461 Msa1225890:CDS
TAGAATTGCAGACCATGAAA+AGG 0.489139 8_1:+91452444 Msa1225890:CDS
GTTTATGAACGCGGATTGAT+CGG 0.489841 8_1:+91451445 Msa1225890:CDS
CAAGCCCAATCACGGCTCTC+AGG 0.490524 8_1:-91448413 None:intergenic
ACATTCTTCTTGAGATGGAT+AGG 0.492398 8_1:+91452329 Msa1225890:CDS
TTGTAGCAGTCAAGCAGTAT+TGG 0.492709 8_1:+91452491 Msa1225890:CDS
ATATATAGAGAGAGAAAGGA+AGG 0.493536 8_1:-91447790 None:intergenic
TGGCTCTCCCAATTTATTGG+TGG 0.493582 8_1:-91450335 None:intergenic
TGAGCTTCATGTGTATCTCT+TGG 0.497157 8_1:-91450021 None:intergenic
CACCACCAGGAAACCTGAAC+CGG 0.497526 8_1:-91448508 None:intergenic
CTGCGGATTCTGGTGGGTCG+GGG 0.498213 8_1:-91448202 None:intergenic
CCGCTTTAGACACCGGTTGT+GGG 0.499535 8_1:+91448612 Msa1225890:CDS
ATTGCCGGAGATGGCGGCGG+AGG 0.500209 8_1:-91448075 None:intergenic
AATGATTGATGATCCAGTTT+GGG 0.502411 8_1:+91451375 Msa1225890:CDS
ATAAAAGAAGTTAGTGGTGG+AGG 0.502506 8_1:+91451139 Msa1225890:CDS
GAGACACTGTCCGGAGAAAG+AGG 0.505810 8_1:+91448334 Msa1225890:CDS
AGCGGTCGTTGAAATTTCCT+CGG 0.506218 8_1:+91448291 Msa1225890:CDS
GTTGATAGAGTGCTACGTCC+TGG 0.506357 8_1:+91450290 Msa1225890:CDS
CAATTTACCTGTCCTCATAG+AGG 0.506394 8_1:-91452182 None:intergenic
CTAATTCCTTGGGGCCAGAA+TGG 0.507755 8_1:+91450153 Msa1225890:CDS
GTCATAGGTTCGAGGATAAG+TGG 0.507789 8_1:-91452133 None:intergenic
ACCATGTTTCCACGTGGCGC+TGG 0.508694 8_1:+91448533 Msa1225890:CDS
CGGAGAATCTCCTCTTTCTC+CGG 0.508889 8_1:-91448344 None:intergenic
GAATTAATCAGGTTGCAAGT+TGG 0.509111 8_1:+91449953 Msa1225890:intron
ATTAGCAGTGGAAGTTTGGA+TGG 0.509258 8_1:+91451205 Msa1225890:CDS
TTGGTGTCATTGCCACAATT+AGG 0.510592 8_1:+91450082 Msa1225890:CDS
TCCTCTCCCACCCTTTCCAA+TGG 0.515898 8_1:-91450355 None:intergenic
TGGGCAATCAGGGCGGATGA+TGG 0.516410 8_1:-91448114 None:intergenic
AGAGGACATTCTTCTTGAGA+TGG 0.516456 8_1:+91452324 Msa1225890:CDS
AGAAAGTAGAGTCTTGAGAG+AGG 0.518829 8_1:-91447984 None:intergenic
ATGTCAGATACCTCAGGAAG+TGG 0.522438 8_1:-91451118 None:intergenic
TGGAGGTGAAATTAGTTTGT+GGG 0.527107 8_1:-91448133 None:intergenic
TTGTTGTTGGATAAAGAAAA+CGG 0.527945 8_1:-91447917 None:intergenic
GGTTCAGGTTTCCTGGTGGT+GGG 0.530907 8_1:+91448510 Msa1225890:CDS
AAACTTCCACTGCTAATCCT+TGG 0.531039 8_1:-91451199 None:intergenic
ATTGGGAGAGCCATTGGAAA+GGG 0.532321 8_1:+91450345 Msa1225890:CDS
AACTCATCAACCTTAAAGAT+GGG 0.532726 8_1:+91448579 Msa1225890:CDS
TGATGTGGATGTGTTGTTGA+AGG 0.534088 8_1:+91452387 Msa1225890:CDS
CGCTTTAGACACCGGTTGTG+GGG 0.535671 8_1:+91448613 Msa1225890:CDS
TCTGACATAAAAGAAGTTAG+TGG 0.535713 8_1:+91451133 Msa1225890:CDS
AATTAGTTTGTGGGCAATCA+GGG 0.536410 8_1:-91448124 None:intergenic
TGGGTCGGGGACGTTATGAT+GGG 0.536486 8_1:-91448189 None:intergenic
GCGGTCGTTGAAATTTCCTC+GGG 0.540278 8_1:+91448292 Msa1225890:CDS
ATCAGGGCGGATGATGGTGG+TGG 0.540450 8_1:-91448108 None:intergenic
GGCGGATGATGGTGGTGGAG+TGG 0.540502 8_1:-91448103 None:intergenic
AGAATTGCAGACCATGAAAA+GGG 0.540625 8_1:+91452445 Msa1225890:CDS
TCAAAGGCTCTTGAAGGGTA+AGG 0.540759 8_1:-91450108 None:intergenic
CGGAGAAAGAGGAGATTCTC+CGG 0.542225 8_1:+91448345 Msa1225890:CDS
ACCACCCACATAAATGGGGT+TGG 0.543751 8_1:-91452650 None:intergenic
GCAATCAGGGCGGATGATGG+TGG 0.544035 8_1:-91448111 None:intergenic
ATTAATCAGGTTGCAAGTTG+GGG 0.545923 8_1:+91449955 Msa1225890:intron
GTCCGAACCGCTTTAGACAC+CGG 0.546098 8_1:+91448605 Msa1225890:CDS
CTTCCACTGCTAATCCTTGG+TGG 0.547020 8_1:-91451196 None:intergenic
ACCAGCGCCACGTGGAAACA+TGG 0.547702 8_1:-91448534 None:intergenic
AACCGGTGTCTAAAGCGGTT+CGG 0.547844 8_1:-91448607 None:intergenic
GTGTTGATCTCAGCCTGGAC+CGG 0.550617 8_1:-91451412 None:intergenic
AGAGGGTTTAGTTTGGACTG+AGG 0.551393 8_1:-91447752 None:intergenic
CAGGCCACCGCGGCGGAATG+CGG 0.551601 8_1:-91448394 None:intergenic
GCAATGACACCAATCAAAGC+TGG 0.552228 8_1:-91450072 None:intergenic
ACACGCGCTGCGGATTCTGG+TGG 0.554767 8_1:-91448209 None:intergenic
AATTTACCTGTCCTCATAGA+GGG 0.556718 8_1:-91452181 None:intergenic
GGAAACATGGTCCCACCACC+AGG 0.557115 8_1:-91448521 None:intergenic
GGAAGAAAGAGAGAGAAAGA+GGG 0.557775 8_1:-91447769 None:intergenic
CAAATCTTAAGAAGACCAAA+AGG 0.559693 8_1:-91452565 None:intergenic
GTGTGACAGATGTAATATAG+AGG 0.560024 8_1:+91452306 Msa1225890:intron
GTGGAGGTGAAATTAGTTTG+TGG 0.561988 8_1:-91448134 None:intergenic
TCATTGCAAAATAACAAGAA+AGG 0.562481 8_1:+91450496 Msa1225890:CDS
TGTCGGATACCGGCACCATA+TGG 0.563020 8_1:+91448368 Msa1225890:CDS
CGCGTTAGTCACACGCGCTG+CGG 0.563602 8_1:-91448219 None:intergenic
CACGCGCTGCGGATTCTGGT+GGG 0.563714 8_1:-91448208 None:intergenic
TTATCGTGAGAGACACTGTC+CGG 0.564748 8_1:+91448325 Msa1225890:CDS
GAGAAAGAGAAAGAAAAGGG+TGG 0.565117 8_1:-91447893 None:intergenic
TTGAGATGGATAGGATATTG+AGG 0.565653 8_1:+91452338 Msa1225890:CDS
GGATCCTTTGCATCACAAAA+GGG 0.566364 8_1:-91450533 None:intergenic
ATTATTGCCGGAGATGGCGG+CGG 0.566393 8_1:-91448078 None:intergenic
GTGGTGATTATTGCCGGAGA+TGG 0.566414 8_1:-91448084 None:intergenic
CCCTTCAAGAGCCTTTGACA+TGG 0.567074 8_1:+91450113 Msa1225890:CDS
ATTTGCAGATGCAATGCAAT+GGG 0.567404 8_1:+91452417 Msa1225890:CDS
GTGATTATTGCCGGAGATGG+CGG 0.568861 8_1:-91448081 None:intergenic
CGCAATATCACACTCCCTTG+TGG 0.570708 8_1:-91452361 None:intergenic
GGGAGAGCCATTGGAAAGGG+TGG 0.572041 8_1:+91450348 Msa1225890:CDS
TTTACAAATTCATCAAGCAA+AGG 0.572771 8_1:-91452820 None:intergenic
TGTGATATTGCGTGATGATG+TGG 0.575145 8_1:+91452372 Msa1225890:CDS
GATAGGATATTGAGGCCACA+AGG 0.581622 8_1:+91452346 Msa1225890:CDS
GATAAACCGACGTCACATAC+CGG 0.584172 8_1:-91448242 None:intergenic
CTTGATATGAATGCTTACAT+GGG 0.587393 8_1:+91451337 Msa1225890:CDS
GATTTGCAGATGCAATGCAA+TGG 0.589141 8_1:+91452416 Msa1225890:CDS
CAGGCTGAGATCAACACACT+TGG 0.589859 8_1:+91451418 Msa1225890:CDS
GATAGAATCCAATACCCTCC+AGG 0.591531 8_1:-91450308 None:intergenic
GATATGAATGCTTACATGGG+AGG 0.592658 8_1:+91451340 Msa1225890:CDS
GACCGCTGCACGTCCTCACA+CGG 0.592771 8_1:-91448275 None:intergenic
TATTTACCATTCTGGCCCCA+AGG 0.593811 8_1:-91450159 None:intergenic
AACTCTCTTCTTCCATAACT+CGG 0.594085 8_1:-91451257 None:intergenic
AAGAGGAGATTCTCCGGTGT+CGG 0.594261 8_1:+91448351 Msa1225890:CDS
GACATAAAAGAAGTTAGTGG+TGG 0.594804 8_1:+91451136 Msa1225890:CDS
AGGGTTTAGTTTGGACTGAG+GGG 0.599146 8_1:-91447750 None:intergenic
CAAAGGATCCTGACTCAGCA+TGG 0.601524 8_1:+91450546 Msa1225890:CDS
GAGGGTATTGGATTCTATCA+GGG 0.605036 8_1:+91450312 Msa1225890:CDS
CAAGTGTGTTGATCTCAGCC+TGG 0.607724 8_1:-91451417 None:intergenic
AGCGCGTGTGACTAACGCGC+CGG 0.610056 8_1:+91448223 Msa1225890:CDS
AATTGGGAGAGCCATTGGAA+AGG 0.610487 8_1:+91450344 Msa1225890:CDS
AGTAAATTACGGTATCTCCC+CGG 0.611082 8_1:-91451316 None:intergenic
AAGCGTGATGGAAGAAGTAG+TGG 0.611496 8_1:-91448156 None:intergenic
GATGGAAGAAGTAGTGGTGG+AGG 0.612403 8_1:-91448150 None:intergenic
CCATGTCAAAGGCTCTTGAA+GGG 0.615041 8_1:-91450113 None:intergenic
CATGAAACAAGTAACGTCCA+TGG 0.615898 8_1:+91447843 Msa1225890:five_prime_UTR
TAGCATACCAAGCCCAATCA+CGG 0.616099 8_1:-91448421 None:intergenic
TGAGCAATGAGCCATGTCAA+AGG 0.616646 8_1:-91450124 None:intergenic
ATGCGGTAGCCATATGGTGC+CGG 0.617366 8_1:-91448377 None:intergenic
ACAGACTTCAATTGAGAGAG+TGG 0.617914 8_1:+91450400 Msa1225890:CDS
GGAGAGCCATTGGAAAGGGT+GGG 0.618351 8_1:+91450349 Msa1225890:CDS
TCACGTTGCCTAATTCCTTG+GGG 0.618705 8_1:+91450144 Msa1225890:CDS
GTTCAATTTGCTCTTGAACG+AGG 0.620941 8_1:+91450045 Msa1225890:CDS
ATGTTTGACACCACTTCCTG+AGG 0.623014 8_1:+91451108 Msa1225890:CDS
CTTGGTGTCGTTTATGAACG+CGG 0.623640 8_1:+91451436 Msa1225890:CDS
ATGGTGCCGGTATCCGACAC+CGG 0.623922 8_1:-91448364 None:intergenic
CGGCTCTCAGGCCACCGCGG+CGG 0.628544 8_1:-91448401 None:intergenic
CTCCGTGTGAGGACGTGCAG+CGG 0.628570 8_1:+91448273 Msa1225890:CDS
CGTGATGGAAGAAGTAGTGG+TGG 0.629415 8_1:-91448153 None:intergenic
CGATAAATTAAATTCTCCCG+AGG 0.629535 8_1:-91448308 None:intergenic
CAATCAGCTATATGAAACCA+TGG 0.635286 8_1:-91447860 None:intergenic
TGTATAAAGTCATAGGTTCG+AGG 0.642463 8_1:-91452141 None:intergenic
ATAGAGTGCTACGTCCTGGA+GGG 0.642534 8_1:+91450294 Msa1225890:CDS
TCACGGCTCTCAGGCCACCG+CGG 0.646633 8_1:-91448404 None:intergenic
CCCACAACCGGTGTCTAAAG+CGG 0.650759 8_1:-91448612 None:intergenic
GGTGTCTAAAGCGGTTCGGA+CGG 0.653499 8_1:-91448603 None:intergenic
ATGTATGCACCAGCGCCACG+TGG 0.656665 8_1:-91448542 None:intergenic
GGTTCGAGGATAAGTGGACA+TGG 0.656711 8_1:-91452127 None:intergenic
CTTGTTTCATGAGAGTGACG+CGG 0.657630 8_1:-91447831 None:intergenic
GCAAACCACCCACATAAATG+GGG 0.658901 8_1:-91452654 None:intergenic
GTTCCACCAAGGATTAGCAG+TGG 0.659990 8_1:+91451193 Msa1225890:CDS
GATAGAGTGCTACGTCCTGG+AGG 0.664230 8_1:+91450293 Msa1225890:CDS
GGTGCAGAGGATGATGGTGA+AGG 0.675786 8_1:-91448009 None:intergenic
ATTATCAGCTAGCAGAGCCG+GGG 0.679309 8_1:+91451299 Msa1225890:CDS
AACGCGCCGGTATGTGACGT+CGG 0.682271 8_1:+91448236 Msa1225890:CDS
ATCGGAGTATACTCCGTGTG+AGG 0.687381 8_1:+91448262 Msa1225890:CDS
GCTACCGCATTCCGCCGCGG+TGG 0.688347 8_1:+91448390 Msa1225890:CDS
TAGTTTGTGGGCAATCAGGG+CGG 0.688675 8_1:-91448121 None:intergenic
GACACTGCTAATATGTCACG+TGG 0.691648 8_1:-91449991 None:intergenic
GACTAACATCAGTTCCACCA+AGG 0.691717 8_1:+91451182 Msa1225890:CDS
GACCGGTTCAGGTTTCCTGG+TGG 0.693052 8_1:+91448506 Msa1225890:CDS
AGGGTGGGAGAGGACTCGTG+AGG 0.694135 8_1:+91450364 Msa1225890:CDS
ATGGCTACCGCATTCCGCCG+CGG 0.698700 8_1:+91448387 Msa1225890:CDS
ATAGGATATTGAGGCCACAA+GGG 0.708060 8_1:+91452347 Msa1225890:CDS
AGGGTAAGGAAGCCTAATTG+TGG 0.711879 8_1:-91450094 None:intergenic
GGTGGGACCATGTTTCCACG+TGG 0.790969 8_1:+91448527 Msa1225890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTCAATTAACTTTTTT+AGG + chr8_1:91448838-91448857 Msa1225890:intron 10.0%
!!! TTTATAAATGTATATGATTT+TGG + chr8_1:91449028-91449047 Msa1225890:intron 10.0%
!!! ATGAAAATTGTATATAATTT+TGG + chr8_1:91449065-91449084 Msa1225890:intron 10.0%
!!! TAAGTTACAAATATTTTAAT+TGG + chr8_1:91449908-91449927 Msa1225890:intron 10.0%
!!! ATAAATTATTTTTTTTGGAA+TGG - chr8_1:91450997-91451016 None:intergenic 10.0%
!!! GTTAATTGAAATTTTTCAAT+TGG - chr8_1:91448832-91448851 None:intergenic 15.0%
!! TTTAAACACTAAACTAAAAA+TGG + chr8_1:91449337-91449356 Msa1225890:intron 15.0%
!! ATGTTATAATTCGATATATA+TGG + chr8_1:91449362-91449381 Msa1225890:intron 15.0%
!! AATTGATATATAGTTAGTTA+AGG + chr8_1:91449430-91449449 Msa1225890:intron 15.0%
!!! CTAAATTGTATTTTTTTTGA+AGG + chr8_1:91449663-91449682 Msa1225890:intron 15.0%
!! ATATTTAAAAGAATAGGAAA+AGG - chr8_1:91450579-91450598 None:intergenic 15.0%
!!! TAATCTATTTATTTGTTAGT+TGG + chr8_1:91450934-91450953 Msa1225890:intron 15.0%
!!! AATTTTCTTTTCTTCATTTT+AGG + chr8_1:91451068-91451087 Msa1225890:intron 15.0%
!!! TATTTACCTTTCTTTAAAAT+TGG - chr8_1:91451557-91451576 None:intergenic 15.0%
!! ACTTTAAATTTAATTATTGG+TGG - chr8_1:91451795-91451814 None:intergenic 15.0%
!! TGCACTTTAAATTTAATTAT+TGG - chr8_1:91451798-91451817 None:intergenic 15.0%
!!! TTATAATTTGATTTTCCTTT+TGG + chr8_1:91452550-91452569 Msa1225890:exon 15.0%
!! TTGAGAAAAAAAACCAAAAT+TGG + chr8_1:91448468-91448487 Msa1225890:CDS 20.0%
!! TGAGAAAAAAAACCAAAATT+GGG + chr8_1:91448469-91448488 Msa1225890:CDS 20.0%
!!! TTGAAATTTTTCAATTGGTT+GGG - chr8_1:91448827-91448846 None:intergenic 20.0%
!!! ATTGAAATTTTTCAATTGGT+TGG - chr8_1:91448828-91448847 None:intergenic 20.0%
!!! TTTTAGGTTGATTTTAGTTT+TGG + chr8_1:91448854-91448873 Msa1225890:intron 20.0%
!! AGAAAAATAAAGTCAAATGT+AGG - chr8_1:91449194-91449213 None:intergenic 20.0%
!! TATATTTCAATTTCAAAGCA+TGG - chr8_1:91449389-91449408 None:intergenic 20.0%
!! AAACAATCTTCTTAAATTCT+TGG + chr8_1:91449556-91449575 Msa1225890:intron 20.0%
!! TTGAAGTTTATATTGTTTGT+TGG + chr8_1:91449753-91449772 Msa1225890:intron 20.0%
!! TGAAGTTTATATTGTTTGTT+GGG + chr8_1:91449754-91449773 Msa1225890:intron 20.0%
!! TTGTTACAATTGAATTAATC+AGG + chr8_1:91449942-91449961 Msa1225890:intron 20.0%
!! CTTTCAAATTAAAATTTGTC+GGG - chr8_1:91450200-91450219 None:intergenic 20.0%
!! GCTTTCAAATTAAAATTTGT+CGG - chr8_1:91450201-91450220 None:intergenic 20.0%
!!! TTGTTTTATGTATTTGTAGA+TGG + chr8_1:91450251-91450270 Msa1225890:intron 20.0%
!! CATTCATATCAAGTAAATTA+CGG - chr8_1:91451330-91451349 None:intergenic 20.0%
!! TTGTTGTTGGATAAAGAAAA+CGG - chr8_1:91447920-91447939 None:intergenic 25.0%
!! TTTTCTTTATCCAACAACAA+TGG + chr8_1:91447920-91447939 Msa1225890:exon 25.0%
!! TATTTAGAACGTTTGAGAAT+TGG + chr8_1:91448901-91448920 Msa1225890:intron 25.0%
! TATAGTTAGTTAAGGTATGT+TGG + chr8_1:91449438-91449457 Msa1225890:intron 25.0%
! TTGCAATGAATATGATTAGT+AGG - chr8_1:91450485-91450504 None:intergenic 25.0%
! TCATTGCAAAATAACAAGAA+AGG + chr8_1:91450496-91450515 Msa1225890:CDS 25.0%
! GTCACAATTCAATATCTTAA+AGG - chr8_1:91450611-91450630 None:intergenic 25.0%
! ACAAGTAACTAAAGAGAAAA+GGG - chr8_1:91451035-91451054 None:intergenic 25.0%
! AACAAGTAACTAAAGAGAAA+AGG - chr8_1:91451036-91451055 None:intergenic 25.0%
! TTAACAACTGCTATTAGAAA+GGG - chr8_1:91451499-91451518 None:intergenic 25.0%
!!! AACCAACCAATTTTAAAGAA+AGG + chr8_1:91451548-91451567 Msa1225890:intron 25.0%
!!! TACCTTTCTTTAAAATTGGT+TGG - chr8_1:91451553-91451572 None:intergenic 25.0%
!!! AATTTTAGTGAGCTAAGATT+AGG - chr8_1:91451822-91451841 None:intergenic 25.0%
! GATAAAGCTATACTATAAGT+GGG - chr8_1:91451919-91451938 None:intergenic 25.0%
! TCACAAAGTTATTATATGAG+TGG - chr8_1:91452275-91452294 None:intergenic 25.0%
!!! TTTCTTTGTTGATTTTGTTC+AGG - chr8_1:91452529-91452548 None:intergenic 25.0%
! AAGTTGACATGAAAAAAGAA+AGG - chr8_1:91452604-91452623 None:intergenic 25.0%
!! TCATGTCAACTTAAATTTTC+AGG + chr8_1:91452612-91452631 Msa1225890:three_prime_UTR 25.0%
!!! TAAACCCCAAACAATTTTTT+GGG - chr8_1:91452713-91452732 None:intergenic 25.0%
!!! ATAAACCCCAAACAATTTTT+TGG - chr8_1:91452714-91452733 None:intergenic 25.0%
! TTTGACAACTTTGTAATTGA+TGG - chr8_1:91452737-91452756 None:intergenic 25.0%
ATATATAGAGAGAGAAAGGA+AGG - chr8_1:91447793-91447812 None:intergenic 30.0%
ACGTATATATAGAGAGAGAA+AGG - chr8_1:91447797-91447816 None:intergenic 30.0%
AAAGAATTAGCCATTGTTGT+TGG - chr8_1:91447933-91447952 None:intergenic 30.0%
TCAATCGTCAATTCTTTATG+TGG - chr8_1:91448452-91448471 None:intergenic 30.0%
! CTTCAAAATGAACCCAATTT+TGG - chr8_1:91448484-91448503 None:intergenic 30.0%
! CAAAATTGGGTTCATTTTGA+AGG + chr8_1:91448482-91448501 Msa1225890:CDS 30.0%
AAACTCATCAACCTTAAAGA+TGG + chr8_1:91448578-91448597 Msa1225890:CDS 30.0%
AACTCATCAACCTTAAAGAT+GGG + chr8_1:91448579-91448598 Msa1225890:CDS 30.0%
TGCATGATAGTAAAAGAAAC+CGG - chr8_1:91448677-91448696 None:intergenic 30.0%
! CATTTTCAATGTCAATGAAC+CGG + chr8_1:91448707-91448726 Msa1225890:intron 30.0%
! ATTTTCAATGTCAATGAACC+GGG + chr8_1:91448708-91448727 Msa1225890:intron 30.0%
AAAGGGAATGTAGGTTAATT+GGG + chr8_1:91448924-91448943 Msa1225890:intron 30.0%
! TTTTCATAAGAAACGATTCC+TGG - chr8_1:91449006-91449025 None:intergenic 30.0%
TAATCATTGTGCAAAACAGA+CGG + chr8_1:91449088-91449107 Msa1225890:intron 30.0%
GTCTATTATTGTGACTTAGT+TGG + chr8_1:91449282-91449301 Msa1225890:intron 30.0%
CTACGAAAAGGATAGATTTA+CGG - chr8_1:91449484-91449503 None:intergenic 30.0%
CATGAAGTAACTTAGAAATC+AGG - chr8_1:91449803-91449822 None:intergenic 30.0%
TTCTAAGTTACTTCATGTTG+CGG + chr8_1:91449806-91449825 Msa1225890:intron 30.0%
! AATTAATCAGGTTGCAAGTT+GGG + chr8_1:91449954-91449973 Msa1225890:intron 30.0%
CAAGGATATATTTACCATTC+TGG - chr8_1:91450170-91450189 None:intergenic 30.0%
TTGGAAAAAACTAGTTCAGA+AGG + chr8_1:91450436-91450455 Msa1225890:CDS 30.0%
TGGAAAAAACTAGTTCAGAA+GGG + chr8_1:91450437-91450456 Msa1225890:CDS 30.0%
AAGATATTGAATTGTGACCA+CGG + chr8_1:91450613-91450632 Msa1225890:intron 30.0%
ACCAAAAAAAACTGATGTCA+CGG + chr8_1:91450711-91450730 Msa1225890:intron 30.0%
! CTTTATCATCTAAGTGGTTT+TGG - chr8_1:91450901-91450920 None:intergenic 30.0%
CAAACTCTTTATCATCTAAG+TGG - chr8_1:91450907-91450926 None:intergenic 30.0%
CAAGTAACTAAAGAGAAAAG+GGG - chr8_1:91451034-91451053 None:intergenic 30.0%
!! TCATTTTAGGTACACCAAAA+TGG + chr8_1:91451081-91451100 Msa1225890:intron 30.0%
! TGTCAAACATGTATCCATTT+TGG - chr8_1:91451098-91451117 None:intergenic 30.0%
TCTGACATAAAAGAAGTTAG+TGG + chr8_1:91451133-91451152 Msa1225890:CDS 30.0%
TCAAAGAAAATACCGAGTTA+TGG + chr8_1:91451245-91451264 Msa1225890:CDS 30.0%
ACTTGATATGAATGCTTACA+TGG + chr8_1:91451336-91451355 Msa1225890:CDS 30.0%
CTTGATATGAATGCTTACAT+GGG + chr8_1:91451337-91451356 Msa1225890:CDS 30.0%
! AATGATTGATGATCCAGTTT+GGG + chr8_1:91451375-91451394 Msa1225890:CDS 30.0%
GTTAACAACTGCTATTAGAA+AGG - chr8_1:91451500-91451519 None:intergenic 30.0%
TCTAATAGCAGTTGTTAACT+AGG + chr8_1:91451501-91451520 Msa1225890:intron 30.0%
CTGATTACAAAAAATGAGAG+AGG + chr8_1:91451641-91451660 Msa1225890:intron 30.0%
! AGCTCACTAAAATTTAGAGT+TGG + chr8_1:91451828-91451847 Msa1225890:intron 30.0%
! ACTTTATAACTGTGCACTTT+TGG + chr8_1:91451854-91451873 Msa1225890:intron 30.0%
CGATAAAGCTATACTATAAG+TGG - chr8_1:91451920-91451939 None:intergenic 30.0%
CTATTGTCAAGGACAAAATT+AGG - chr8_1:91451990-91452009 None:intergenic 30.0%
! CAATTTTCTGTCTATTGTCA+AGG - chr8_1:91452001-91452020 None:intergenic 30.0%
ATCAGCATGTATAAAGTCAT+AGG - chr8_1:91452151-91452170 None:intergenic 30.0%
GGACAGGTAAATTGTAAAAT+TGG + chr8_1:91452191-91452210 Msa1225890:intron 30.0%
! CTACAAGTATCTTTTCTCTT+TGG - chr8_1:91452477-91452496 None:intergenic 30.0%
CAAATCTTAAGAAGACCAAA+AGG - chr8_1:91452568-91452587 None:intergenic 30.0%
ATTGACCCCAAAAAATTGTT+TGG + chr8_1:91452704-91452723 Msa1225890:three_prime_UTR 30.0%
TTGACCCCAAAAAATTGTTT+GGG + chr8_1:91452705-91452724 Msa1225890:three_prime_UTR 30.0%
!!! AAACCCCAAACAATTTTTTG+GGG - chr8_1:91452712-91452731 None:intergenic 30.0%
CAATCAGCTATATGAAACCA+TGG - chr8_1:91447863-91447882 None:intergenic 35.0%
GGAGAGAAAGAGAAAGAAAA+GGG - chr8_1:91447899-91447918 None:intergenic 35.0%
!! AATTAGTTTGTGGGCAATCA+GGG - chr8_1:91448127-91448146 None:intergenic 35.0%
!! AAATTAGTTTGTGGGCAATC+AGG - chr8_1:91448128-91448147 None:intergenic 35.0%
!! TGGAGGTGAAATTAGTTTGT+GGG - chr8_1:91448136-91448155 None:intergenic 35.0%
CGATAAATTAAATTCTCCCG+AGG - chr8_1:91448311-91448330 None:intergenic 35.0%
! GGTGCATACATTGATGATAT+CGG + chr8_1:91448554-91448573 Msa1225890:CDS 35.0%
GGTTCAAGAAAACTTAAACC+GGG - chr8_1:91448656-91448675 None:intergenic 35.0%
CGGTTCAAGAAAACTTAAAC+CGG - chr8_1:91448657-91448676 None:intergenic 35.0%
!! CGGTTTAAGTTTTCTTGAAC+CGG + chr8_1:91448655-91448674 Msa1225890:intron 35.0%
TTGTTGAACTAACCATAGAG+GGG - chr8_1:91448744-91448763 None:intergenic 35.0%
GTTGTTGAACTAACCATAGA+GGG - chr8_1:91448745-91448764 None:intergenic 35.0%
TGTTGTTGAACTAACCATAG+AGG - chr8_1:91448746-91448765 None:intergenic 35.0%
TAGAAAAATGAACCATGAGC+AGG + chr8_1:91448770-91448789 Msa1225890:intron 35.0%
AGAACGTTTGAGAATTGGAA+AGG + chr8_1:91448906-91448925 Msa1225890:intron 35.0%
GAACGTTTGAGAATTGGAAA+GGG + chr8_1:91448907-91448926 Msa1225890:intron 35.0%
GAAAGGGAATGTAGGTTAAT+TGG + chr8_1:91448923-91448942 Msa1225890:intron 35.0%
AATCATTGTGCAAAACAGAC+GGG + chr8_1:91449089-91449108 Msa1225890:intron 35.0%
GAAAATTTCGTCACGTCTAT+AGG - chr8_1:91449317-91449336 None:intergenic 35.0%
! TCCTTTTCGTAGAGAGAAAA+AGG + chr8_1:91449492-91449511 Msa1225890:intron 35.0%
! CCTTTTCGTAGAGAGAAAAA+GGG + chr8_1:91449493-91449512 Msa1225890:intron 35.0%
! CTTTTCGTAGAGAGAAAAAG+GGG + chr8_1:91449494-91449513 Msa1225890:intron 35.0%
AGAGAAAAAGGGGAACATAT+AGG + chr8_1:91449504-91449523 Msa1225890:intron 35.0%
!! GCACAAATTTGTTGTATCAC+TGG + chr8_1:91449852-91449871 Msa1225890:intron 35.0%
! GAATTAATCAGGTTGCAAGT+TGG + chr8_1:91449953-91449972 Msa1225890:intron 35.0%
! ATTAATCAGGTTGCAAGTTG+GGG + chr8_1:91449955-91449974 Msa1225890:intron 35.0%
GTTTGTGATCGTTAAGATTG+CGG + chr8_1:91450659-91450678 Msa1225890:intron 35.0%
! GTTAAGATTGCGGAGAATTT+TGG + chr8_1:91450669-91450688 Msa1225890:intron 35.0%
TTGGTCAAATGAGACTGATA+TGG + chr8_1:91450688-91450707 Msa1225890:intron 35.0%
!!! ACCGTGACATCAGTTTTTTT+TGG - chr8_1:91450715-91450734 None:intergenic 35.0%
!!! GGTCGCGGATTTTTTTTATA+AGG + chr8_1:91450732-91450751 Msa1225890:intron 35.0%
TATCACTGCCAAACTCTATT+TGG - chr8_1:91450878-91450897 None:intergenic 35.0%
! TTTATGCACCTTTTCGAAAG+TGG + chr8_1:91450957-91450976 Msa1225890:intron 35.0%
AAGAATCTCCACTTTCGAAA+AGG - chr8_1:91450968-91450987 None:intergenic 35.0%
! TCGAAAGTGGAGATTCTTTT+TGG + chr8_1:91450970-91450989 Msa1225890:intron 35.0%
! TCTTTTATGTCAGATACCTC+AGG - chr8_1:91451127-91451146 None:intergenic 35.0%
GACATAAAAGAAGTTAGTGG+TGG + chr8_1:91451136-91451155 Msa1225890:CDS 35.0%
ATAAAAGAAGTTAGTGGTGG+AGG + chr8_1:91451139-91451158 Msa1225890:CDS 35.0%
AACTCTCTTCTTCCATAACT+CGG - chr8_1:91451260-91451279 None:intergenic 35.0%
! CAATGATTGATGATCCAGTT+TGG + chr8_1:91451374-91451393 Msa1225890:CDS 35.0%
ACAATATTCATGACCCAAAC+TGG - chr8_1:91451391-91451410 None:intergenic 35.0%
TTGGGTCATGAATATTGTTC+CGG + chr8_1:91451393-91451412 Msa1225890:CDS 35.0%
!! AAATGAGAGAGGTTTGCTAA+AGG + chr8_1:91451652-91451671 Msa1225890:intron 35.0%
! TTATAACTGTGCACTTTTGG+AGG + chr8_1:91451857-91451876 Msa1225890:intron 35.0%
GCTTTACACATTTCATCACA+TGG + chr8_1:91452050-91452069 Msa1225890:intron 35.0%
TGTATAAAGTCATAGGTTCG+AGG - chr8_1:91452144-91452163 None:intergenic 35.0%
! TTCTCTTTTTACCCTCTATG+AGG + chr8_1:91452170-91452189 Msa1225890:CDS 35.0%
AATTTACCTGTCCTCATAGA+GGG - chr8_1:91452184-91452203 None:intergenic 35.0%
GTGTGACAGATGTAATATAG+AGG + chr8_1:91452306-91452325 Msa1225890:intron 35.0%
ACATTCTTCTTGAGATGGAT+AGG + chr8_1:91452329-91452348 Msa1225890:CDS 35.0%
TTGAGATGGATAGGATATTG+AGG + chr8_1:91452338-91452357 Msa1225890:CDS 35.0%
ATTTGCAGATGCAATGCAAT+GGG + chr8_1:91452417-91452436 Msa1225890:CDS 35.0%
TAGAATTGCAGACCATGAAA+AGG + chr8_1:91452444-91452463 Msa1225890:CDS 35.0%
AGAATTGCAGACCATGAAAA+GGG + chr8_1:91452445-91452464 Msa1225890:CDS 35.0%
! AGTATCTTTTCTCTTTGGTG+TGG - chr8_1:91452472-91452491 None:intergenic 35.0%
!!! TTGATTTTGTTCAGGTTGTG+GGG - chr8_1:91452521-91452540 None:intergenic 35.0%
!!! GTTGATTTTGTTCAGGTTGT+GGG - chr8_1:91452522-91452541 None:intergenic 35.0%
!!! TGTTGATTTTGTTCAGGTTG+TGG - chr8_1:91452523-91452542 None:intergenic 35.0%
! TTTTCCAACCCCATTTATGT+GGG + chr8_1:91452646-91452665 Msa1225890:three_prime_UTR 35.0%
TGACCCCAAAAAATTGTTTG+GGG + chr8_1:91452706-91452725 Msa1225890:three_prime_UTR 35.0%
GAGAGAAAGAGGGTTTAGTT+TGG - chr8_1:91447762-91447781 None:intergenic 40.0%
GGAAGAAAGAGAGAGAAAGA+GGG - chr8_1:91447772-91447791 None:intergenic 40.0%
AGGAAGAAAGAGAGAGAAAG+AGG - chr8_1:91447773-91447792 None:intergenic 40.0%
CATGAAACAAGTAACGTCCA+TGG + chr8_1:91447843-91447862 Msa1225890:five_prime_UTR 40.0%
GAGAAAGAGAAAGAAAAGGG+TGG - chr8_1:91447896-91447915 None:intergenic 40.0%
CGGAGAGAAAGAGAAAGAAA+AGG - chr8_1:91447900-91447919 None:intergenic 40.0%
! AGTCTTGAGAGAGGTTTGTT+GGG - chr8_1:91447978-91447997 None:intergenic 40.0%
AGAAAGTAGAGTCTTGAGAG+AGG - chr8_1:91447987-91448006 None:intergenic 40.0%
! AAAAAAGGTGCAGAGGATGA+TGG - chr8_1:91448018-91448037 None:intergenic 40.0%
!!! TGCACCTTTTTTTACCTCCT+TGG + chr8_1:91448026-91448045 Msa1225890:CDS 40.0%
! GTGGAGGTGAAATTAGTTTG+TGG - chr8_1:91448137-91448156 None:intergenic 40.0%
! GTACGTTTTTCTTGAACTCC+CGG + chr8_1:91448635-91448654 Msa1225890:intron 40.0%
TTGGGTCCAAACCTTGAATA+GGG - chr8_1:91448809-91448828 None:intergenic 40.0%
GAGAATTGGAAAGGGAATGT+AGG + chr8_1:91448915-91448934 Msa1225890:intron 40.0%
TTCTTTCCTTAGTTGCTTCC+AGG + chr8_1:91448985-91449004 Msa1225890:intron 40.0%
! CCCTTTTTCTCTCTACGAAA+AGG - chr8_1:91449496-91449515 None:intergenic 40.0%
TGAGCTTCATGTGTATCTCT+TGG - chr8_1:91450024-91450043 None:intergenic 40.0%
! GTTCAATTTGCTCTTGAACG+AGG + chr8_1:91450045-91450064 Msa1225890:CDS 40.0%
!! TTGGTGTCATTGCCACAATT+AGG + chr8_1:91450082-91450101 Msa1225890:CDS 40.0%
!! GAGGGTATTGGATTCTATCA+GGG + chr8_1:91450312-91450331 Msa1225890:CDS 40.0%
TATCAGGGCCACCAATAAAT+TGG + chr8_1:91450327-91450346 Msa1225890:CDS 40.0%
ATCAGGGCCACCAATAAATT+GGG + chr8_1:91450328-91450347 Msa1225890:CDS 40.0%
CAATGGCTCTCCCAATTTAT+TGG - chr8_1:91450341-91450360 None:intergenic 40.0%
CAATAAATTGGGAGAGCCAT+TGG + chr8_1:91450339-91450358 Msa1225890:CDS 40.0%
ACAGACTTCAATTGAGAGAG+TGG + chr8_1:91450400-91450419 Msa1225890:CDS 40.0%
GAGTGGCAAAAAGTCTTTGT+TGG + chr8_1:91450417-91450436 Msa1225890:CDS 40.0%
AGAAGGGTGACATTGCAATA+TGG + chr8_1:91450453-91450472 Msa1225890:CDS 40.0%
! TAGACCCTTTTGTGATGCAA+AGG + chr8_1:91450529-91450548 Msa1225890:CDS 40.0%
GGATCCTTTGCATCACAAAA+GGG - chr8_1:91450536-91450555 None:intergenic 40.0%
AGGATCCTTTGCATCACAAA+AGG - chr8_1:91450537-91450556 None:intergenic 40.0%
GTATATTACCATGCTGAGTC+AGG - chr8_1:91450557-91450576 None:intergenic 40.0%
AAACTTCCACTGCTAATCCT+TGG - chr8_1:91451202-91451221 None:intergenic 40.0%
! AAGGATTAGCAGTGGAAGTT+TGG + chr8_1:91451201-91451220 Msa1225890:CDS 40.0%
ATTAGCAGTGGAAGTTTGGA+TGG + chr8_1:91451205-91451224 Msa1225890:CDS 40.0%
AGTAAATTACGGTATCTCCC+CGG - chr8_1:91451319-91451338 None:intergenic 40.0%
GATATGAATGCTTACATGGG+AGG + chr8_1:91451340-91451359 Msa1225890:CDS 40.0%
! GTTTATGAACGCGGATTGAT+CGG + chr8_1:91451445-91451464 Msa1225890:CDS 40.0%
TGATCGGAACATATCAGAAC+TGG + chr8_1:91451461-91451480 Msa1225890:CDS 40.0%
! TTTTTACCCTCTATGAGGAC+AGG + chr8_1:91452175-91452194 Msa1225890:CDS 40.0%
CAATTTACCTGTCCTCATAG+AGG - chr8_1:91452185-91452204 None:intergenic 40.0%
AGAGGACATTCTTCTTGAGA+TGG + chr8_1:91452324-91452343 Msa1225890:CDS 40.0%
ATAGGATATTGAGGCCACAA+GGG + chr8_1:91452347-91452366 Msa1225890:CDS 40.0%
! TGTGATATTGCGTGATGATG+TGG + chr8_1:91452372-91452391 Msa1225890:CDS 40.0%
! TGATGTGGATGTGTTGTTGA+AGG + chr8_1:91452387-91452406 Msa1225890:CDS 40.0%
GATTTGCAGATGCAATGCAA+TGG + chr8_1:91452416-91452435 Msa1225890:CDS 40.0%
TTGTAGCAGTCAAGCAGTAT+TGG + chr8_1:91452491-91452510 Msa1225890:CDS 40.0%
! CTTTTCCAACCCCATTTATG+TGG + chr8_1:91452645-91452664 Msa1225890:three_prime_UTR 40.0%
TGCAAACCACCCACATAAAT+GGG - chr8_1:91452658-91452677 None:intergenic 40.0%
TTGCAAACCACCCACATAAA+TGG - chr8_1:91452659-91452678 None:intergenic 40.0%
!! AGGGTTTAGTTTGGACTGAG+GGG - chr8_1:91447753-91447772 None:intergenic 45.0%
!! GAGGGTTTAGTTTGGACTGA+GGG - chr8_1:91447754-91447773 None:intergenic 45.0%
!! AGAGGGTTTAGTTTGGACTG+AGG - chr8_1:91447755-91447774 None:intergenic 45.0%
CTTGTTTCATGAGAGTGACG+CGG - chr8_1:91447834-91447853 None:intergenic 45.0%
GAGTCTTGAGAGAGGTTTGT+TGG - chr8_1:91447979-91447998 None:intergenic 45.0%
! GGAGGTAAAAAAAGGTGCAG+AGG - chr8_1:91448025-91448044 None:intergenic 45.0%
GAGGCCAAGGAGGTAAAAAA+AGG - chr8_1:91448033-91448052 None:intergenic 45.0%
!!! TTTTTTACCTCCTTGGCCTC+TGG + chr8_1:91448033-91448052 Msa1225890:CDS 45.0%
! AAGCGTGATGGAAGAAGTAG+TGG - chr8_1:91448159-91448178 None:intergenic 45.0%
GGCTGAAAAATCAAGCGTGA+TGG - chr8_1:91448171-91448190 None:intergenic 45.0%
GATAAACCGACGTCACATAC+CGG - chr8_1:91448245-91448264 None:intergenic 45.0%
!! GGTATGTGACGTCGGTTTAT+CGG + chr8_1:91448244-91448263 Msa1225890:CDS 45.0%
AGCGGTCGTTGAAATTTCCT+CGG + chr8_1:91448291-91448310 Msa1225890:CDS 45.0%
TTATCGTGAGAGACACTGTC+CGG + chr8_1:91448325-91448344 Msa1225890:CDS 45.0%
TAGCATACCAAGCCCAATCA+CGG - chr8_1:91448424-91448443 None:intergenic 45.0%
!! GGGTTCATTTTGAAGGTGAC+CGG + chr8_1:91448489-91448508 Msa1225890:CDS 45.0%
!! ATTTTGAAGGTGACCGGTTC+AGG + chr8_1:91448495-91448514 Msa1225890:CDS 45.0%
AGAAAAACGTACCCCACAAC+CGG - chr8_1:91448627-91448646 None:intergenic 45.0%
TTCAATGTCAATGAACCGGG+TGG + chr8_1:91448711-91448730 Msa1225890:intron 45.0%
ACCATGAGCAGGAATGTGAT+TGG + chr8_1:91448781-91448800 Msa1225890:intron 45.0%
ACCAATCACATTCCTGCTCA+TGG - chr8_1:91448785-91448804 None:intergenic 45.0%
! TGTGATTGGTCCCCTATTCA+AGG + chr8_1:91448795-91448814 Msa1225890:intron 45.0%
TTGGTCCCCTATTCAAGGTT+TGG + chr8_1:91448800-91448819 Msa1225890:intron 45.0%
TGGGTCCAAACCTTGAATAG+GGG - chr8_1:91448808-91448827 None:intergenic 45.0%
GTTGGGTCCAAACCTTGAAT+AGG - chr8_1:91448810-91448829 None:intergenic 45.0%
ACGATTCCTGGAAGCAACTA+AGG - chr8_1:91448994-91449013 None:intergenic 45.0%
GACACTGCTAATATGTCACG+TGG - chr8_1:91449994-91450013 None:intergenic 45.0%
GCAATGACACCAATCAAAGC+TGG - chr8_1:91450075-91450094 None:intergenic 45.0%
AGGGTAAGGAAGCCTAATTG+TGG - chr8_1:91450097-91450116 None:intergenic 45.0%
TCAAAGGCTCTTGAAGGGTA+AGG - chr8_1:91450111-91450130 None:intergenic 45.0%
CCATGTCAAAGGCTCTTGAA+GGG - chr8_1:91450116-91450135 None:intergenic 45.0%
TGAGCAATGAGCCATGTCAA+AGG - chr8_1:91450127-91450146 None:intergenic 45.0%
CTCACGTTGCCTAATTCCTT+GGG + chr8_1:91450143-91450162 Msa1225890:CDS 45.0%
TCACGTTGCCTAATTCCTTG+GGG + chr8_1:91450144-91450163 Msa1225890:CDS 45.0%
TATTTACCATTCTGGCCCCA+AGG - chr8_1:91450162-91450181 None:intergenic 45.0%
GATAGAATCCAATACCCTCC+AGG - chr8_1:91450311-91450330 None:intergenic 45.0%
!! GGAGGGTATTGGATTCTATC+AGG + chr8_1:91450311-91450330 Msa1225890:CDS 45.0%
TGGCTCTCCCAATTTATTGG+TGG - chr8_1:91450338-91450357 None:intergenic 45.0%
AATTGGGAGAGCCATTGGAA+AGG + chr8_1:91450344-91450363 Msa1225890:CDS 45.0%
ATTGGGAGAGCCATTGGAAA+GGG + chr8_1:91450345-91450364 Msa1225890:CDS 45.0%
AAAAACTGATGTCACGGTCG+CGG + chr8_1:91450717-91450736 Msa1225890:intron 45.0%
! GCTTGCTGCCAAATAGAGTT+TGG + chr8_1:91450867-91450886 Msa1225890:intron 45.0%
ATGTTTGACACCACTTCCTG+AGG + chr8_1:91451108-91451127 Msa1225890:CDS 45.0%
ATGTCAGATACCTCAGGAAG+TGG - chr8_1:91451121-91451140 None:intergenic 45.0%
! TGTTAGTCTCTCAGGCCAAT+TGG - chr8_1:91451170-91451189 None:intergenic 45.0%
! GGAACTGATGTTAGTCTCTC+AGG - chr8_1:91451178-91451197 None:intergenic 45.0%
GACTAACATCAGTTCCACCA+AGG + chr8_1:91451182-91451201 Msa1225890:CDS 45.0%
TGATTATCAGCTAGCAGAGC+CGG + chr8_1:91451297-91451316 Msa1225890:CDS 45.0%
CATGAATATTGTTCCGGTCC+AGG + chr8_1:91451399-91451418 Msa1225890:CDS 45.0%
!! CTTGGTGTCGTTTATGAACG+CGG + chr8_1:91451436-91451455 Msa1225890:CDS 45.0%
GTCATAGGTTCGAGGATAAG+TGG - chr8_1:91452136-91452155 None:intergenic 45.0%
GATAGGATATTGAGGCCACA+AGG + chr8_1:91452346-91452365 Msa1225890:CDS 45.0%
!! TTTGGTGTGGTCCCTTTTCA+TGG - chr8_1:91452459-91452478 None:intergenic 45.0%
GCAAACCACCCACATAAATG+GGG - chr8_1:91452657-91452676 None:intergenic 45.0%
!! TAATTAATATTTAAAAGAAT+AGG - chr8_1:91450585-91450604 None:intergenic 5.0%
!!! AACAAATAAATTATTTTTTT+TGG - chr8_1:91451002-91451021 None:intergenic 5.0%
GTGATTATTGCCGGAGATGG+CGG - chr8_1:91448084-91448103 None:intergenic 50.0%
GTGGTGATTATTGCCGGAGA+TGG - chr8_1:91448087-91448106 None:intergenic 50.0%
GGTGGAGTGGTGATTATTGC+CGG - chr8_1:91448093-91448112 None:intergenic 50.0%
! TAGTTTGTGGGCAATCAGGG+CGG - chr8_1:91448124-91448143 None:intergenic 50.0%
GATGGAAGAAGTAGTGGTGG+AGG - chr8_1:91448153-91448172 None:intergenic 50.0%
! CGTGATGGAAGAAGTAGTGG+TGG - chr8_1:91448156-91448175 None:intergenic 50.0%
ATCGGAGTATACTCCGTGTG+AGG + chr8_1:91448262-91448281 Msa1225890:CDS 50.0%
GCGGTCGTTGAAATTTCCTC+GGG + chr8_1:91448292-91448311 Msa1225890:CDS 50.0%
CGGAGAATCTCCTCTTTCTC+CGG - chr8_1:91448347-91448366 None:intergenic 50.0%
CGGAGAAAGAGGAGATTCTC+CGG + chr8_1:91448345-91448364 Msa1225890:CDS 50.0%
AAGAGGAGATTCTCCGGTGT+CGG + chr8_1:91448351-91448370 Msa1225890:CDS 50.0%
TTCGGACGGACCCATCTTTA+AGG - chr8_1:91448592-91448611 None:intergenic 50.0%
! AACCGGTGTCTAAAGCGGTT+CGG - chr8_1:91448610-91448629 None:intergenic 50.0%
! CGAGGAGTTCCAGCTTTGAT+TGG + chr8_1:91450063-91450082 Msa1225890:CDS 50.0%
CCCTTCAAGAGCCTTTGACA+TGG + chr8_1:91450113-91450132 Msa1225890:CDS 50.0%
GCCATGTCAAAGGCTCTTGA+AGG - chr8_1:91450117-91450136 None:intergenic 50.0%
GCTCACGTTGCCTAATTCCT+TGG + chr8_1:91450142-91450161 Msa1225890:CDS 50.0%
CATTCTGGCCCCAAGGAATT+AGG - chr8_1:91450155-91450174 None:intergenic 50.0%
CTAATTCCTTGGGGCCAGAA+TGG + chr8_1:91450153-91450172 Msa1225890:CDS 50.0%
AATTTGTCGGGCACACGACA+AGG - chr8_1:91450188-91450207 None:intergenic 50.0%
! GTTGATAGAGTGCTACGTCC+TGG + chr8_1:91450290-91450309 Msa1225890:CDS 50.0%
! ATAGAGTGCTACGTCCTGGA+GGG + chr8_1:91450294-91450313 Msa1225890:CDS 50.0%
CAAAGGATCCTGACTCAGCA+TGG + chr8_1:91450546-91450565 Msa1225890:CDS 50.0%
TGAATTCTCGATTGCGACCG+TGG - chr8_1:91450633-91450652 None:intergenic 50.0%
! GTGGTGGAGGATTGTCCAAT+TGG + chr8_1:91451152-91451171 Msa1225890:CDS 50.0%
! GTTCCACCAAGGATTAGCAG+TGG + chr8_1:91451193-91451212 Msa1225890:CDS 50.0%
CTTCCACTGCTAATCCTTGG+TGG - chr8_1:91451199-91451218 None:intergenic 50.0%
GATTATCAGCTAGCAGAGCC+GGG + chr8_1:91451298-91451317 Msa1225890:CDS 50.0%
ATTATCAGCTAGCAGAGCCG+GGG + chr8_1:91451299-91451318 Msa1225890:CDS 50.0%
! CAAGTGTGTTGATCTCAGCC+TGG - chr8_1:91451420-91451439 None:intergenic 50.0%
CAGGCTGAGATCAACACACT+TGG + chr8_1:91451418-91451437 Msa1225890:CDS 50.0%
!!! ACTGCTTTTTGTCTCCACCC+AGG + chr8_1:91452097-91452116 Msa1225890:intron 50.0%
GGTTCGAGGATAAGTGGACA+TGG - chr8_1:91452130-91452149 None:intergenic 50.0%
CGCAATATCACACTCCCTTG+TGG - chr8_1:91452364-91452383 None:intergenic 50.0%
TCCAACCCCATTTATGTGGG+TGG + chr8_1:91452649-91452668 Msa1225890:three_prime_UTR 50.0%
ACCACCCACATAAATGGGGT+TGG - chr8_1:91452653-91452672 None:intergenic 50.0%
! GGTGCAGAGGATGATGGTGA+AGG - chr8_1:91448012-91448031 None:intergenic 55.0%
! AGTTTTGCCAGAGGCCAAGG+AGG - chr8_1:91448043-91448062 None:intergenic 55.0%
! AGGAGTTTTGCCAGAGGCCA+AGG - chr8_1:91448046-91448065 None:intergenic 55.0%
! TGGTGGAGGAGTTTTGCCAG+AGG - chr8_1:91448052-91448071 None:intergenic 55.0%
! ATTATTGCCGGAGATGGCGG+CGG - chr8_1:91448081-91448100 None:intergenic 55.0%
TGGGTCGGGGACGTTATGAT+GGG - chr8_1:91448192-91448211 None:intergenic 55.0%
GAGACACTGTCCGGAGAAAG+AGG + chr8_1:91448334-91448353 Msa1225890:CDS 55.0%
! GATTCTCCGGTGTCGGATAC+CGG + chr8_1:91448358-91448377 Msa1225890:CDS 55.0%
TGTCGGATACCGGCACCATA+TGG + chr8_1:91448368-91448387 Msa1225890:CDS 55.0%
ATGCGGTAGCCATATGGTGC+CGG - chr8_1:91448380-91448399 None:intergenic 55.0%
CACCACCAGGAAACCTGAAC+CGG - chr8_1:91448511-91448530 None:intergenic 55.0%
! GGTTCAGGTTTCCTGGTGGT+GGG + chr8_1:91448510-91448529 Msa1225890:CDS 55.0%
! GGTGTCTAAAGCGGTTCGGA+CGG - chr8_1:91448606-91448625 None:intergenic 55.0%
! GTCCGAACCGCTTTAGACAC+CGG + chr8_1:91448605-91448624 Msa1225890:CDS 55.0%
! ACCGCTTTAGACACCGGTTG+TGG + chr8_1:91448611-91448630 Msa1225890:CDS 55.0%
CCCACAACCGGTGTCTAAAG+CGG - chr8_1:91448615-91448634 None:intergenic 55.0%
! CCGCTTTAGACACCGGTTGT+GGG + chr8_1:91448612-91448631 Msa1225890:CDS 55.0%
! CGCTTTAGACACCGGTTGTG+GGG + chr8_1:91448613-91448632 Msa1225890:CDS 55.0%
TAGAGGGGAAGTGAACCACC+CGG - chr8_1:91448729-91448748 None:intergenic 55.0%
GGTGGTTCACTTCCCCTCTA+TGG + chr8_1:91448729-91448748 Msa1225890:intron 55.0%
! GATAGAGTGCTACGTCCTGG+AGG + chr8_1:91450293-91450312 Msa1225890:CDS 55.0%
! TGCTACGTCCTGGAGGGTAT+TGG + chr8_1:91450300-91450319 Msa1225890:CDS 55.0%
GGAGAGCCATTGGAAAGGGT+GGG + chr8_1:91450349-91450368 Msa1225890:CDS 55.0%
TCCTCTCCCACCCTTTCCAA+TGG - chr8_1:91450358-91450377 None:intergenic 55.0%
! GTGTTGATCTCAGCCTGGAC+CGG - chr8_1:91451415-91451434 None:intergenic 55.0%
GTGGACATGGCTTCACACCT+GGG - chr8_1:91452117-91452136 None:intergenic 55.0%
AGTGGACATGGCTTCACACC+TGG - chr8_1:91452118-91452137 None:intergenic 55.0%
!! ATCAGGGCGGATGATGGTGG+TGG - chr8_1:91448111-91448130 None:intergenic 60.0%
! GCAATCAGGGCGGATGATGG+TGG - chr8_1:91448114-91448133 None:intergenic 60.0%
TGGGCAATCAGGGCGGATGA+TGG - chr8_1:91448117-91448136 None:intergenic 60.0%
GTGGGTCGGGGACGTTATGA+TGG - chr8_1:91448193-91448212 None:intergenic 60.0%
! AACGCGCCGGTATGTGACGT+CGG + chr8_1:91448236-91448255 Msa1225890:CDS 60.0%
!! ATGGTGCCGGTATCCGACAC+CGG - chr8_1:91448367-91448386 None:intergenic 60.0%
GGCGGAATGCGGTAGCCATA+TGG - chr8_1:91448386-91448405 None:intergenic 60.0%
GTGGCCTGAGAGCCGTGATT+GGG + chr8_1:91448409-91448428 Msa1225890:CDS 60.0%
CAAGCCCAATCACGGCTCTC+AGG - chr8_1:91448416-91448435 None:intergenic 60.0%
CTGAGAGCCGTGATTGGGCT+TGG + chr8_1:91448414-91448433 Msa1225890:CDS 60.0%
! GGTGACCGGTTCAGGTTTCC+TGG + chr8_1:91448503-91448522 Msa1225890:CDS 60.0%
! GACCGGTTCAGGTTTCCTGG+TGG + chr8_1:91448506-91448525 Msa1225890:CDS 60.0%
! CGGTTCAGGTTTCCTGGTGG+TGG + chr8_1:91448509-91448528 Msa1225890:CDS 60.0%
GGAAACATGGTCCCACCACC+AGG - chr8_1:91448524-91448543 None:intergenic 60.0%
GGTGGGACCATGTTTCCACG+TGG + chr8_1:91448527-91448546 Msa1225890:CDS 60.0%
ACCATGTTTCCACGTGGCGC+TGG + chr8_1:91448533-91448552 Msa1225890:CDS 60.0%
ACCAGCGCCACGTGGAAACA+TGG - chr8_1:91448537-91448556 None:intergenic 60.0%
ATGTATGCACCAGCGCCACG+TGG - chr8_1:91448545-91448564 None:intergenic 60.0%
GGGAGAGCCATTGGAAAGGG+TGG + chr8_1:91450348-91450367 Msa1225890:CDS 60.0%
GCCATTGGAAAGGGTGGGAG+AGG + chr8_1:91450354-91450373 Msa1225890:CDS 60.0%
GACATGGCTTCACACCTGGG+TGG - chr8_1:91452114-91452133 None:intergenic 60.0%
!! GGCGGATGATGGTGGTGGAG+TGG - chr8_1:91448106-91448125 None:intergenic 65.0%
! CTGCGGATTCTGGTGGGTCG+GGG - chr8_1:91448205-91448224 None:intergenic 65.0%
! GCTGCGGATTCTGGTGGGTC+GGG - chr8_1:91448206-91448225 None:intergenic 65.0%
! CGCTGCGGATTCTGGTGGGT+CGG - chr8_1:91448207-91448226 None:intergenic 65.0%
CACGCGCTGCGGATTCTGGT+GGG - chr8_1:91448211-91448230 None:intergenic 65.0%
ACACGCGCTGCGGATTCTGG+TGG - chr8_1:91448212-91448231 None:intergenic 65.0%
GTCACACGCGCTGCGGATTC+TGG - chr8_1:91448215-91448234 None:intergenic 65.0%
CGCGTTAGTCACACGCGCTG+CGG - chr8_1:91448222-91448241 None:intergenic 65.0%
AGCGCGTGTGACTAACGCGC+CGG + chr8_1:91448223-91448242 Msa1225890:CDS 65.0%
CTCCGTGTGAGGACGTGCAG+CGG + chr8_1:91448273-91448292 Msa1225890:CDS 65.0%
GACCGCTGCACGTCCTCACA+CGG - chr8_1:91448278-91448297 None:intergenic 65.0%
ATGGCTACCGCATTCCGCCG+CGG + chr8_1:91448387-91448406 Msa1225890:CDS 65.0%
GGTGGCCTGAGAGCCGTGAT+TGG + chr8_1:91448408-91448427 Msa1225890:CDS 65.0%
AGGGTGGGAGAGGACTCGTG+AGG + chr8_1:91450364-91450383 Msa1225890:CDS 65.0%
ACCACCTCCGCCGCCATCTC+CGG + chr8_1:91448071-91448090 Msa1225890:CDS 70.0%
! ATTGCCGGAGATGGCGGCGG+AGG - chr8_1:91448078-91448097 None:intergenic 70.0%
TCACGGCTCTCAGGCCACCG+CGG - chr8_1:91448407-91448426 None:intergenic 70.0%
! GATGGCGGCGGAGGTGGTGG+TGG - chr8_1:91448069-91448088 None:intergenic 75.0%
! GGAGATGGCGGCGGAGGTGG+TGG - chr8_1:91448072-91448091 None:intergenic 75.0%
GCTACCGCATTCCGCCGCGG+TGG + chr8_1:91448390-91448409 Msa1225890:CDS 75.0%
CAGGCCACCGCGGCGGAATG+CGG - chr8_1:91448397-91448416 None:intergenic 75.0%
!!! GGCGGCGGAGGTGGTGGTGG+AGG - chr8_1:91448066-91448085 None:intergenic 80.0%
!! GCCGGAGATGGCGGCGGAGG+TGG - chr8_1:91448075-91448094 None:intergenic 80.0%
! CGGCTCTCAGGCCACCGCGG+CGG - chr8_1:91448404-91448423 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 91447741 91452840 91447741 ID=Msa1225890;Name=Msa1225890
chr8_1 mRNA 91447741 91452840 91447741 ID=Msa1225890-mRNA-1;Parent=Msa1225890;Name=Msa1225890-mRNA-1;_AED=0.04;_eAED=0.04;_QI=198|1|1|1|1|1|6|285|638
chr8_1 exon 91447741 91448634 91447741 ID=Msa1225890-mRNA-1:exon:33335;Parent=Msa1225890-mRNA-1
chr8_1 exon 91449964 91450174 91449964 ID=Msa1225890-mRNA-1:exon:33336;Parent=Msa1225890-mRNA-1
chr8_1 exon 91450270 91450567 91450270 ID=Msa1225890-mRNA-1:exon:33337;Parent=Msa1225890-mRNA-1
chr8_1 exon 91451090 91451482 91451090 ID=Msa1225890-mRNA-1:exon:33338;Parent=Msa1225890-mRNA-1
chr8_1 exon 91452119 91452196 91452119 ID=Msa1225890-mRNA-1:exon:33339;Parent=Msa1225890-mRNA-1
chr8_1 exon 91452315 91452840 91452315 ID=Msa1225890-mRNA-1:exon:33340;Parent=Msa1225890-mRNA-1
chr8_1 five_prime_UTR 91447741 91447938 91447741 ID=Msa1225890-mRNA-1:five_prime_utr;Parent=Msa1225890-mRNA-1
chr8_1 CDS 91447939 91448634 91447939 ID=Msa1225890-mRNA-1:cds;Parent=Msa1225890-mRNA-1
chr8_1 CDS 91449964 91450174 91449964 ID=Msa1225890-mRNA-1:cds;Parent=Msa1225890-mRNA-1
chr8_1 CDS 91450270 91450567 91450270 ID=Msa1225890-mRNA-1:cds;Parent=Msa1225890-mRNA-1
chr8_1 CDS 91451090 91451482 91451090 ID=Msa1225890-mRNA-1:cds;Parent=Msa1225890-mRNA-1
chr8_1 CDS 91452119 91452196 91452119 ID=Msa1225890-mRNA-1:cds;Parent=Msa1225890-mRNA-1
chr8_1 CDS 91452315 91452555 91452315 ID=Msa1225890-mRNA-1:cds;Parent=Msa1225890-mRNA-1
chr8_1 three_prime_UTR 91452556 91452840 91452556 ID=Msa1225890-mRNA-1:three_prime_utr;Parent=Msa1225890-mRNA-1
Gene Sequence

>Msa1225890

ATGGCTAATTCTTTCTTATCAATTTTCAACAAGAAACCCAACAAACCTCTCTCAAGACTCTACTTTCTCACCTTCACCATCATCCTCTGCACCTTTTTTTACCTCCTTGGCCTCTGGCAAAACTCCTCCACCACCACCTCCGCCGCCATCTCCGGCAATAATCACCACTCCACCACCATCATCCGCCCTGATTGCCCACAAACTAATTTCACCTCCACCACTACTTCTTCCATCACGCTTGATTTTTCAGCCCATCATAACGTCCCCGACCCACCAGAATCCGCAGCGCGTGTGACTAACGCGCCGGTATGTGACGTCGGTTTATCGGAGTATACTCCGTGTGAGGACGTGCAGCGGTCGTTGAAATTTCCTCGGGAGAATTTAATTTATCGTGAGAGACACTGTCCGGAGAAAGAGGAGATTCTCCGGTGTCGGATACCGGCACCATATGGCTACCGCATTCCGCCGCGGTGGCCTGAGAGCCGTGATTGGGCTTGGTATGCTAATGTGCCACATAAAGAATTGACGATTGAGAAAAAAAACCAAAATTGGGTTCATTTTGAAGGTGACCGGTTCAGGTTTCCTGGTGGTGGGACCATGTTTCCACGTGGCGCTGGTGCATACATTGATGATATCGGAAAACTCATCAACCTTAAAGATGGGTCCGTCCGAACCGCTTTAGACACCGGTTGTGGGGTTGCAAGTTGGGGAGCATATCTTTTGCCACGTGACATATTAGCAGTGTCATTTGCACCAAGAGATACACATGAAGCTCAAGTTCAATTTGCTCTTGAACGAGGAGTTCCAGCTTTGATTGGTGTCATTGCCACAATTAGGCTTCCTTACCCTTCAAGAGCCTTTGACATGGCTCATTGCTCACGTTGCCTAATTCCTTGGGGCCAGAATGATGGAATTTATTTAACTGAAGTTGATAGAGTGCTACGTCCTGGAGGGTATTGGATTCTATCAGGGCCACCAATAAATTGGGAGAGCCATTGGAAAGGGTGGGAGAGGACTCGTGAGGATCTAAATGCTGAACAGACTTCAATTGAGAGAGTGGCAAAAAGTCTTTGTTGGAAAAAACTAGTTCAGAAGGGTGACATTGCAATATGGCAAAAGCCTACTAATCATATTCATTGCAAAATAACAAGAAAGGTCTTCAAGAATAGACCCTTTTGTGATGCAAAGGATCCTGACTCAGCATGGTACACCAAAATGGATACATGTTTGACACCACTTCCTGAGGTATCTGACATAAAAGAAGTTAGTGGTGGAGGATTGTCCAATTGGCCTGAGAGACTAACATCAGTTCCACCAAGGATTAGCAGTGGAAGTTTGGATGGAATCACAGCTGAGATGTTCAAAGAAAATACCGAGTTATGGAAGAAGAGAGTTGCATACTACAAGACACTTGATTATCAGCTAGCAGAGCCGGGGAGATACCGTAATTTACTTGATATGAATGCTTACATGGGAGGATTTGCAGCTGCAATGATTGATGATCCAGTTTGGGTCATGAATATTGTTCCGGTCCAGGCTGAGATCAACACACTTGGTGTCGTTTATGAACGCGGATTGATCGGAACATATCAGAACTGGTGTGAAGCCATGTCCACTTATCCTCGAACCTATGACTTTATACATGCTGATTCTCTTTTTACCCTCTATGAGGACAGATGTAATATAGAGGACATTCTTCTTGAGATGGATAGGATATTGAGGCCACAAGGGAGTGTGATATTGCGTGATGATGTGGATGTGTTGTTGAAGGTAAAAAGATTTGCAGATGCAATGCAATGGGATGCTAGAATTGCAGACCATGAAAAGGGACCACACCAAAGAGAAAAGATACTTGTAGCAGTCAAGCAGTATTGGACATCCCCACAACCTGAACAAAATCAACAAAGAAAGTTATAA
Protein sequence

>Msa1225890

MANSFLSIFNKKPNKPLSRLYFLTFTIILCTFFYLLGLWQNSSTTTSAAISGNNHHSTTIIRPDCPQTNFTSTTTSSITLDFSAHHNVPDPPESAARVTNAPVCDVGLSEYTPCEDVQRSLKFPRENLIYRERHCPEKEEILRCRIPAPYGYRIPPRWPESRDWAWYANVPHKELTIEKKNQNWVHFEGDRFRFPGGGTMFPRGAGAYIDDIGKLINLKDGSVRTALDTGCGVASWGAYLLPRDILAVSFAPRDTHEAQVQFALERGVPALIGVIATIRLPYPSRAFDMAHCSRCLIPWGQNDGIYLTEVDRVLRPGGYWILSGPPINWESHWKGWERTREDLNAEQTSIERVAKSLCWKKLVQKGDIAIWQKPTNHIHCKITRKVFKNRPFCDAKDPDSAWYTKMDTCLTPLPEVSDIKEVSGGGLSNWPERLTSVPPRISSGSLDGITAEMFKENTELWKKRVAYYKTLDYQLAEPGRYRNLLDMNAYMGGFAAAMIDDPVWVMNIVPVQAEINTLGVVYERGLIGTYQNWCEAMSTYPRTYDFIHADSLFTLYEDRCNIEDILLEMDRILRPQGSVILRDDVDVLLKVKRFADAMQWDARIADHEKGPHQREKILVAVKQYWTSPQPEQNQQRKL*