Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195770 | XP_003594074.1 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 684 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195770 | sp|Q9Y376|CAB39_HUMAN | 47.006 | 334 | 173 | 3 | 1 | 334 | 1 | 330 | 2.01e-93 | 285 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195770 | B7FJS9 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 684 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007080 | Msa0195770 | 0.803288 | 3.744782e-49 | -8.615850e-47 |
Msa0011720 | Msa0195770 | 0.837706 | 4.436881e-57 | -8.615850e-47 |
Msa0017510 | Msa0195770 | 0.816153 | 6.404837e-52 | -8.615850e-47 |
Msa0028640 | Msa0195770 | 0.811234 | 7.751757e-51 | -8.615850e-47 |
Msa0038350 | Msa0195770 | -0.804258 | 2.355289e-49 | -8.615850e-47 |
Msa0048000 | Msa0195770 | 0.802573 | 5.262976e-49 | -8.615850e-47 |
Msa0072000 | Msa0195770 | 0.802214 | 6.239845e-49 | -8.615850e-47 |
Msa0091770 | Msa0195770 | 0.824170 | 9.330719e-54 | -8.615850e-47 |
Msa0092990 | Msa0195770 | 0.807068 | 6.055846e-50 | -8.615850e-47 |
Msa0094100 | Msa0195770 | 0.800536 | 1.376354e-48 | -8.615850e-47 |
Msa0096450 | Msa0195770 | 0.810860 | 9.342921e-51 | -8.615850e-47 |
Msa0101810 | Msa0195770 | -0.809211 | 2.116464e-50 | -8.615850e-47 |
Msa0102750 | Msa0195770 | 0.806733 | 7.128733e-50 | -8.615850e-47 |
Msa0105340 | Msa0195770 | 0.807771 | 4.294497e-50 | -8.615850e-47 |
Msa0105420 | Msa0195770 | 0.839981 | 1.144333e-57 | -8.615850e-47 |
Msa0106370 | Msa0195770 | -0.802277 | 6.056371e-49 | -8.615850e-47 |
Msa0115810 | Msa0195770 | 0.811273 | 7.602724e-51 | -8.615850e-47 |
Msa0124110 | Msa0195770 | 0.800595 | 1.338861e-48 | -8.615850e-47 |
Msa0140780 | Msa0195770 | 0.808284 | 3.340082e-50 | -8.615850e-47 |
Msa0157290 | Msa0195770 | 0.815706 | 8.058327e-52 | -8.615850e-47 |
Msa0164360 | Msa0195770 | 0.800987 | 1.113606e-48 | -8.615850e-47 |
Msa0170320 | Msa0195770 | 0.800120 | 1.672499e-48 | -8.615850e-47 |
Msa0173990 | Msa0195770 | 0.814369 | 1.596099e-51 | -8.615850e-47 |
Msa0185640 | Msa0195770 | -0.838408 | 2.927575e-57 | -8.615850e-47 |
Msa0188630 | Msa0195770 | 0.812632 | 3.845358e-51 | -8.615850e-47 |
Msa0193650 | Msa0195770 | 0.814874 | 1.233646e-51 | -8.615850e-47 |
Msa0195770 | Msa0200260 | 0.807582 | 4.710649e-50 | -8.615850e-47 |
Msa0195770 | Msa0201070 | 0.824336 | 8.530017e-54 | -8.615850e-47 |
Msa0195770 | Msa0208630 | 0.804720 | 1.886263e-49 | -8.615850e-47 |
Msa0195770 | Msa0212310 | 0.806518 | 7.914230e-50 | -8.615850e-47 |
Msa0195770 | Msa0215320 | -0.811405 | 7.116909e-51 | -8.615850e-47 |
Msa0195770 | Msa0215830 | 0.805436 | 1.336104e-49 | -8.615850e-47 |
Msa0195770 | Msa0217400 | 0.853424 | 2.411263e-61 | -8.615850e-47 |
Msa0195770 | Msa0221060 | 0.837094 | 6.367401e-57 | -8.615850e-47 |
Msa0195770 | Msa0223380 | 0.806498 | 7.988459e-50 | -8.615850e-47 |
Msa0195770 | Msa0226250 | 0.805563 | 1.256880e-49 | -8.615850e-47 |
Msa0195770 | Msa0230770 | 0.831609 | 1.514686e-55 | -8.615850e-47 |
Msa0195770 | Msa0233190 | 0.800862 | 1.180870e-48 | -8.615850e-47 |
Msa0195770 | Msa0243100 | 0.814900 | 1.217064e-51 | -8.615850e-47 |
Msa0195770 | Msa0243690 | 0.806561 | 7.747148e-50 | -8.615850e-47 |
Msa0195770 | Msa0243710 | 0.810250 | 1.265372e-50 | -8.615850e-47 |
Msa0195770 | Msa0244860 | 0.803371 | 3.598700e-49 | -8.615850e-47 |
Msa0195770 | Msa0257250 | 0.852228 | 5.298186e-61 | -8.615850e-47 |
Msa0195770 | Msa0258760 | 0.849291 | 3.554255e-60 | -8.615850e-47 |
Msa0195770 | Msa0260810 | 0.812702 | 3.711124e-51 | -8.615850e-47 |
Msa0195770 | Msa0260910 | 0.807613 | 4.641372e-50 | -8.615850e-47 |
Msa0195770 | Msa0262520 | 0.839305 | 1.715481e-57 | -8.615850e-47 |
Msa0195770 | Msa0265820 | 0.813544 | 2.426129e-51 | -8.615850e-47 |
Msa0195770 | Msa0266000 | -0.852150 | 5.575867e-61 | -8.615850e-47 |
Msa0195770 | Msa0269360 | 0.834448 | 2.979211e-56 | -8.615850e-47 |
Msa0195770 | Msa0269450 | 0.818501 | 1.896820e-52 | -8.615850e-47 |
Msa0195770 | Msa0269820 | 0.810565 | 1.081849e-50 | -8.615850e-47 |
Msa0195770 | Msa0270100 | 0.803862 | 2.846399e-49 | -8.615850e-47 |
Msa0195770 | Msa0270270 | 0.837525 | 4.937682e-57 | -8.615850e-47 |
Msa0195770 | Msa0270440 | -0.809398 | 1.930353e-50 | -8.615850e-47 |
Msa0195770 | Msa0282250 | 0.858707 | 6.849965e-63 | -8.615850e-47 |
Msa0195770 | Msa0282590 | 0.822237 | 2.637788e-53 | -8.615850e-47 |
Msa0195770 | Msa0283450 | 0.812645 | 3.819150e-51 | -8.615850e-47 |
Msa0195770 | Msa0287650 | 0.805526 | 1.279332e-49 | -8.615850e-47 |
Msa0195770 | Msa0288330 | 0.802031 | 6.803545e-49 | -8.615850e-47 |
Msa0195770 | Msa0294950 | 0.824661 | 7.152336e-54 | -8.615850e-47 |
Msa0195770 | Msa0294960 | 0.839544 | 1.487269e-57 | -8.615850e-47 |
Msa0195770 | Msa0296160 | 0.817540 | 3.127716e-52 | -8.615850e-47 |
Msa0195770 | Msa0296560 | 0.855455 | 6.235812e-62 | -8.615850e-47 |
Msa0195770 | Msa0304740 | 0.831829 | 1.337429e-55 | -8.615850e-47 |
Msa0195770 | Msa0311580 | 0.807438 | 5.054975e-50 | -8.615850e-47 |
Msa0195770 | Msa0313990 | 0.845297 | 4.435044e-59 | -8.615850e-47 |
Msa0195770 | Msa0323080 | 0.847441 | 1.153878e-59 | -8.615850e-47 |
Msa0195770 | Msa0323180 | 0.827631 | 1.406411e-54 | -8.615850e-47 |
Msa0195770 | Msa0323620 | 0.832467 | 9.296551e-56 | -8.615850e-47 |
Msa0195770 | Msa0326670 | 0.811322 | 7.418858e-51 | -8.615850e-47 |
Msa0195770 | Msa0331590 | 0.829095 | 6.235828e-55 | -8.615850e-47 |
Msa0195770 | Msa0331920 | 0.849998 | 2.255418e-60 | -8.615850e-47 |
Msa0195770 | Msa0333720 | -0.831841 | 1.327923e-55 | -8.615850e-47 |
Msa0195770 | Msa0334570 | 0.811506 | 6.767152e-51 | -8.615850e-47 |
Msa0195770 | Msa0335040 | 0.843918 | 1.042407e-58 | -8.615850e-47 |
Msa0195770 | Msa0336040 | -0.818090 | 2.349550e-52 | -8.615850e-47 |
Msa0195770 | Msa0338110 | 0.841062 | 5.967664e-58 | -8.615850e-47 |
Msa0195770 | Msa0342200 | 0.812457 | 4.199633e-51 | -8.615850e-47 |
Msa0195770 | Msa0342340 | -0.836305 | 1.011808e-56 | -8.615850e-47 |
Msa0195770 | Msa0342910 | 0.800172 | 1.632334e-48 | -8.615850e-47 |
Msa0195770 | Msa0344830 | 0.848378 | 6.366620e-60 | -8.615850e-47 |
Msa0195770 | Msa0349080 | 0.806265 | 8.948114e-50 | -8.615850e-47 |
Msa0195770 | Msa0350990 | 0.819196 | 1.318716e-52 | -8.615850e-47 |
Msa0195770 | Msa0351030 | 0.815571 | 8.635168e-52 | -8.615850e-47 |
Msa0195770 | Msa0351100 | 0.816457 | 5.475890e-52 | -8.615850e-47 |
Msa0195770 | Msa0351980 | 0.808923 | 2.439619e-50 | -8.615850e-47 |
Msa0195770 | Msa0362740 | 0.818750 | 1.665433e-52 | -8.615850e-47 |
Msa0195770 | Msa0365490 | 0.821747 | 3.425768e-53 | -8.615850e-47 |
Msa0195770 | Msa0371420 | -0.821582 | 3.740776e-53 | -8.615850e-47 |
Msa0195770 | Msa0373930 | 0.826701 | 2.347648e-54 | -8.615850e-47 |
Msa0195770 | Msa0376590 | 0.829846 | 4.095947e-55 | -8.615850e-47 |
Msa0195770 | Msa0379640 | 0.806173 | 9.352851e-50 | -8.615850e-47 |
Msa0195770 | Msa0381620 | -0.808270 | 3.362819e-50 | -8.615850e-47 |
Msa0195770 | Msa0388960 | 0.811238 | 7.738325e-51 | -8.615850e-47 |
Msa0195770 | Msa0389340 | 0.804420 | 2.178999e-49 | -8.615850e-47 |
Msa0195770 | Msa0414070 | 0.804017 | 2.642772e-49 | -8.615850e-47 |
Msa0195770 | Msa0423090 | 0.809158 | 2.172436e-50 | -8.615850e-47 |
Msa0195770 | Msa0423360 | -0.821826 | 3.284428e-53 | -8.615850e-47 |
Msa0195770 | Msa0426360 | 0.834301 | 3.244030e-56 | -8.615850e-47 |
Msa0195770 | Msa0426400 | 0.838207 | 3.298948e-57 | -8.615850e-47 |
Msa0195770 | Msa0428930 | 0.815185 | 1.052466e-51 | -8.615850e-47 |
Msa0195770 | Msa0431690 | 0.803715 | 3.054294e-49 | -8.615850e-47 |
Msa0195770 | Msa0432770 | 0.802125 | 6.506734e-49 | -8.615850e-47 |
Msa0195770 | Msa0437710 | 0.809278 | 2.047474e-50 | -8.615850e-47 |
Msa0195770 | Msa0442670 | 0.816901 | 4.353582e-52 | -8.615850e-47 |
Msa0195770 | Msa0442850 | 0.839512 | 1.515795e-57 | -8.615850e-47 |
Msa0195770 | Msa0448550 | -0.830971 | 2.174427e-55 | -8.615850e-47 |
Msa0195770 | Msa0449760 | 0.835312 | 1.805465e-56 | -8.615850e-47 |
Msa0195770 | Msa0452310 | 0.813440 | 2.556791e-51 | -8.615850e-47 |
Msa0195770 | Msa0458310 | 0.809663 | 1.692879e-50 | -8.615850e-47 |
Msa0195770 | Msa0458440 | 0.837533 | 4.913740e-57 | -8.615850e-47 |
Msa0195770 | Msa0459770 | -0.818575 | 1.824640e-52 | -8.615850e-47 |
Msa0195770 | Msa0465680 | -0.841502 | 4.569783e-58 | -8.615850e-47 |
Msa0195770 | Msa0466390 | 0.819088 | 1.395523e-52 | -8.615850e-47 |
Msa0195770 | Msa0467900 | -0.809806 | 1.577507e-50 | -8.615850e-47 |
Msa0195770 | Msa0469160 | 0.805218 | 1.484578e-49 | -8.615850e-47 |
Msa0195770 | Msa0469240 | 0.832077 | 1.161454e-55 | -8.615850e-47 |
Msa0195770 | Msa0469290 | 0.820969 | 5.178632e-53 | -8.615850e-47 |
Msa0195770 | Msa0471800 | 0.826034 | 3.385335e-54 | -8.615850e-47 |
Msa0195770 | Msa0473080 | 0.803306 | 3.712844e-49 | -8.615850e-47 |
Msa0195770 | Msa0473240 | 0.825276 | 5.119437e-54 | -8.615850e-47 |
Msa0195770 | Msa0480000 | 0.800108 | 1.682589e-48 | -8.615850e-47 |
Msa0195770 | Msa0480320 | 0.803578 | 3.261183e-49 | -8.615850e-47 |
Msa0195770 | Msa0480600 | 0.801640 | 8.184364e-49 | -8.615850e-47 |
Msa0195770 | Msa0484780 | 0.816654 | 4.947746e-52 | -8.615850e-47 |
Msa0195770 | Msa0488400 | 0.817059 | 4.013191e-52 | -8.615850e-47 |
Msa0195770 | Msa0490350 | 0.812045 | 5.165092e-51 | -8.615850e-47 |
Msa0195770 | Msa0491040 | 0.800890 | 1.165364e-48 | -8.615850e-47 |
Msa0195770 | Msa0508200 | 0.807258 | 5.519390e-50 | -8.615850e-47 |
Msa0195770 | Msa0509970 | 0.808092 | 3.669611e-50 | -8.615850e-47 |
Msa0195770 | Msa0512900 | 0.800846 | 1.189679e-48 | -8.615850e-47 |
Msa0195770 | Msa0514290 | -0.800429 | 1.447323e-48 | -8.615850e-47 |
Msa0195770 | Msa0515010 | 0.810066 | 1.386284e-50 | -8.615850e-47 |
Msa0195770 | Msa0516370 | 0.835315 | 1.802882e-56 | -8.615850e-47 |
Msa0195770 | Msa0517330 | 0.815068 | 1.117291e-51 | -8.615850e-47 |
Msa0195770 | Msa0518610 | 0.829594 | 4.716131e-55 | -8.615850e-47 |
Msa0195770 | Msa0524890 | -0.829635 | 4.611355e-55 | -8.615850e-47 |
Msa0195770 | Msa0528970 | 0.831923 | 1.267698e-55 | -8.615850e-47 |
Msa0195770 | Msa0533070 | 0.806730 | 7.137258e-50 | -8.615850e-47 |
Msa0195770 | Msa0535060 | 0.803273 | 3.771973e-49 | -8.615850e-47 |
Msa0195770 | Msa0535210 | 0.811178 | 7.972946e-51 | -8.615850e-47 |
Msa0195770 | Msa0536220 | 0.807049 | 6.112232e-50 | -8.615850e-47 |
Msa0195770 | Msa0540320 | 0.824962 | 6.074166e-54 | -8.615850e-47 |
Msa0195770 | Msa0553460 | 0.827256 | 1.729585e-54 | -8.615850e-47 |
Msa0195770 | Msa0558690 | 0.812504 | 4.101363e-51 | -8.615850e-47 |
Msa0195770 | Msa0562440 | 0.801342 | 9.421268e-49 | -8.615850e-47 |
Msa0195770 | Msa0564510 | 0.804839 | 1.781700e-49 | -8.615850e-47 |
Msa0195770 | Msa0567020 | 0.818254 | 2.157464e-52 | -8.615850e-47 |
Msa0195770 | Msa0578970 | 0.846370 | 2.266451e-59 | -8.615850e-47 |
Msa0195770 | Msa0581760 | 0.806840 | 6.767060e-50 | -8.615850e-47 |
Msa0195770 | Msa0582110 | 0.812925 | 3.316565e-51 | -8.615850e-47 |
Msa0195770 | Msa0585000 | -0.823391 | 1.420285e-53 | -8.615850e-47 |
Msa0195770 | Msa0585700 | 0.842149 | 3.084867e-58 | -8.615850e-47 |
Msa0195770 | Msa0591770 | 0.809172 | 2.158121e-50 | -8.615850e-47 |
Msa0195770 | Msa0596100 | 0.811410 | 7.099005e-51 | -8.615850e-47 |
Msa0195770 | Msa0598460 | 0.807792 | 4.250570e-50 | -8.615850e-47 |
Msa0195770 | Msa0599290 | 0.811484 | 6.842341e-51 | -8.615850e-47 |
Msa0195770 | Msa0599580 | 0.808340 | 3.250390e-50 | -8.615850e-47 |
Msa0195770 | Msa0599770 | 0.806400 | 8.381000e-50 | -8.615850e-47 |
Msa0195770 | Msa0599890 | 0.845256 | 4.548393e-59 | -8.615850e-47 |
Msa0195770 | Msa0607540 | 0.824312 | 8.641403e-54 | -8.615850e-47 |
Msa0195770 | Msa0610590 | 0.845680 | 3.491809e-59 | -8.615850e-47 |
Msa0195770 | Msa0621590 | 0.952830 | 1.037982e-110 | -8.615850e-47 |
Msa0195770 | Msa0621890 | 0.814438 | 1.540653e-51 | -8.615850e-47 |
Msa0195770 | Msa0623080 | 0.803783 | 2.956486e-49 | -8.615850e-47 |
Msa0195770 | Msa0624730 | 0.827816 | 1.269492e-54 | -8.615850e-47 |
Msa0195770 | Msa0625930 | 0.807674 | 4.504695e-50 | -8.615850e-47 |
Msa0195770 | Msa0638280 | 0.823258 | 1.525912e-53 | -8.615850e-47 |
Msa0195770 | Msa0638320 | 0.829312 | 5.522038e-55 | -8.615850e-47 |
Msa0195770 | Msa0647450 | -0.807230 | 5.594629e-50 | -8.615850e-47 |
Msa0195770 | Msa0647830 | 0.814021 | 1.904651e-51 | -8.615850e-47 |
Msa0195770 | Msa0649970 | 0.813115 | 3.013686e-51 | -8.615850e-47 |
Msa0195770 | Msa0651190 | 0.846403 | 2.220331e-59 | -8.615850e-47 |
Msa0195770 | Msa0653020 | 0.827965 | 1.169138e-54 | -8.615850e-47 |
Msa0195770 | Msa0657670 | 0.824364 | 8.403007e-54 | -8.615850e-47 |
Msa0195770 | Msa0657970 | 0.827993 | 1.150817e-54 | -8.615850e-47 |
Msa0195770 | Msa0658570 | 0.835340 | 1.776603e-56 | -8.615850e-47 |
Msa0195770 | Msa0661190 | -0.800977 | 1.118898e-48 | -8.615850e-47 |
Msa0195770 | Msa0661870 | 0.809923 | 1.488311e-50 | -8.615850e-47 |
Msa0195770 | Msa0662650 | 0.834014 | 3.829277e-56 | -8.615850e-47 |
Msa0195770 | Msa0663710 | 0.807773 | 4.291618e-50 | -8.615850e-47 |
Msa0195770 | Msa0674220 | 0.805722 | 1.163466e-49 | -8.615850e-47 |
Msa0195770 | Msa0677270 | 0.824036 | 1.003052e-53 | -8.615850e-47 |
Msa0195770 | Msa0677400 | 0.808110 | 3.637241e-50 | -8.615850e-47 |
Msa0195770 | Msa0678820 | 0.809831 | 1.558168e-50 | -8.615850e-47 |
Msa0195770 | Msa0690440 | 0.812414 | 4.291946e-51 | -8.615850e-47 |
Msa0195770 | Msa0692230 | 0.821409 | 4.100856e-53 | -8.615850e-47 |
Msa0195770 | Msa0696640 | 0.807283 | 5.452479e-50 | -8.615850e-47 |
Msa0195770 | Msa0697140 | 0.822020 | 2.960979e-53 | -8.615850e-47 |
Msa0195770 | Msa0703490 | 0.818816 | 1.609086e-52 | -8.615850e-47 |
Msa0195770 | Msa0708860 | 0.833211 | 6.073686e-56 | -8.615850e-47 |
Msa0195770 | Msa0715720 | 0.822367 | 2.460755e-53 | -8.615850e-47 |
Msa0195770 | Msa0722930 | 0.837625 | 4.655941e-57 | -8.615850e-47 |
Msa0195770 | Msa0723140 | 0.833550 | 5.000145e-56 | -8.615850e-47 |
Msa0195770 | Msa0723650 | 0.807004 | 6.245434e-50 | -8.615850e-47 |
Msa0195770 | Msa0743200 | 0.800862 | 1.180730e-48 | -8.615850e-47 |
Msa0195770 | Msa0743260 | 0.808905 | 2.461667e-50 | -8.615850e-47 |
Msa0195770 | Msa0743720 | 0.809745 | 1.625246e-50 | -8.615850e-47 |
Msa0195770 | Msa0756630 | -0.809051 | 2.290225e-50 | -8.615850e-47 |
Msa0195770 | Msa0776030 | 0.803497 | 3.388766e-49 | -8.615850e-47 |
Msa0195770 | Msa0780400 | 0.830176 | 3.403651e-55 | -8.615850e-47 |
Msa0195770 | Msa0787470 | 0.821546 | 3.813189e-53 | -8.615850e-47 |
Msa0195770 | Msa0791070 | 0.954906 | 1.024338e-112 | -8.615850e-47 |
Msa0195770 | Msa0801760 | 0.815584 | 8.579954e-52 | -8.615850e-47 |
Msa0195770 | Msa0832370 | 0.821346 | 4.240287e-53 | -8.615850e-47 |
Msa0195770 | Msa0838940 | 0.806847 | 6.742881e-50 | -8.615850e-47 |
Msa0195770 | Msa0839330 | 0.823937 | 1.058181e-53 | -8.615850e-47 |
Msa0195770 | Msa0843280 | 0.850977 | 1.197562e-60 | -8.615850e-47 |
Msa0195770 | Msa0844240 | 0.807448 | 5.030103e-50 | -8.615850e-47 |
Msa0195770 | Msa0844900 | 0.815018 | 1.146348e-51 | -8.615850e-47 |
Msa0195770 | Msa0845590 | -0.803202 | 3.900670e-49 | -8.615850e-47 |
Msa0195770 | Msa0846810 | 0.809160 | 2.170324e-50 | -8.615850e-47 |
Msa0195770 | Msa0867890 | 0.806945 | 6.428388e-50 | -8.615850e-47 |
Msa0195770 | Msa0876850 | -0.823939 | 1.057085e-53 | -8.615850e-47 |
Msa0195770 | Msa0880140 | 0.814733 | 1.325739e-51 | -8.615850e-47 |
Msa0195770 | Msa0885280 | 0.816456 | 5.480272e-52 | -8.615850e-47 |
Msa0195770 | Msa0886330 | -0.820511 | 6.599450e-53 | -8.615850e-47 |
Msa0195770 | Msa0891040 | 0.850226 | 1.947298e-60 | -8.615850e-47 |
Msa0195770 | Msa0893810 | 0.802599 | 5.198221e-49 | -8.615850e-47 |
Msa0195770 | Msa0896210 | 0.830182 | 3.390924e-55 | -8.615850e-47 |
Msa0195770 | Msa0896220 | 0.801412 | 9.116779e-49 | -8.615850e-47 |
Msa0195770 | Msa0896750 | 0.814088 | 1.840559e-51 | -8.615850e-47 |
Msa0195770 | Msa0900200 | 0.807400 | 5.149056e-50 | -8.615850e-47 |
Msa0195770 | Msa0907070 | 0.808848 | 2.531550e-50 | -8.615850e-47 |
Msa0195770 | Msa0908170 | 0.808010 | 3.821311e-50 | -8.615850e-47 |
Msa0195770 | Msa0910980 | -0.826065 | 3.327642e-54 | -8.615850e-47 |
Msa0195770 | Msa0921330 | 0.806635 | 7.476285e-50 | -8.615850e-47 |
Msa0195770 | Msa0927670 | 0.803227 | 3.854632e-49 | -8.615850e-47 |
Msa0195770 | Msa0930460 | -0.813914 | 2.010915e-51 | -8.615850e-47 |
Msa0195770 | Msa0932780 | -0.800745 | 1.247707e-48 | -8.615850e-47 |
Msa0195770 | Msa0942080 | -0.826928 | 2.072441e-54 | -8.615850e-47 |
Msa0195770 | Msa0946120 | 0.827130 | 1.853981e-54 | -8.615850e-47 |
Msa0195770 | Msa0951720 | 0.815707 | 8.054822e-52 | -8.615850e-47 |
Msa0195770 | Msa0956390 | 0.803348 | 3.638694e-49 | -8.615850e-47 |
Msa0195770 | Msa0961420 | -0.841855 | 3.688717e-58 | -8.615850e-47 |
Msa0195770 | Msa0965520 | 0.832569 | 8.771616e-56 | -8.615850e-47 |
Msa0195770 | Msa0980440 | 0.817761 | 2.788665e-52 | -8.615850e-47 |
Msa0195770 | Msa0988500 | 0.804714 | 1.891623e-49 | -8.615850e-47 |
Msa0195770 | Msa0990960 | 0.825298 | 5.060361e-54 | -8.615850e-47 |
Msa0195770 | Msa0991670 | 0.824985 | 5.998393e-54 | -8.615850e-47 |
Msa0195770 | Msa0992490 | -0.813745 | 2.190674e-51 | -8.615850e-47 |
Msa0195770 | Msa0993290 | 0.804177 | 2.448555e-49 | -8.615850e-47 |
Msa0195770 | Msa0993600 | 0.806603 | 7.593901e-50 | -8.615850e-47 |
Msa0195770 | Msa0999040 | 0.805702 | 1.175180e-49 | -8.615850e-47 |
Msa0195770 | Msa1000020 | 0.825985 | 3.477708e-54 | -8.615850e-47 |
Msa0195770 | Msa1001200 | 0.813954 | 1.970482e-51 | -8.615850e-47 |
Msa0195770 | Msa1008490 | 0.829039 | 6.433727e-55 | -8.615850e-47 |
Msa0195770 | Msa1009000 | 0.816809 | 4.565570e-52 | -8.615850e-47 |
Msa0195770 | Msa1014540 | 0.802207 | 6.258350e-49 | -8.615850e-47 |
Msa0195770 | Msa1019020 | 0.803910 | 2.782161e-49 | -8.615850e-47 |
Msa0195770 | Msa1026760 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
Msa0195770 | Msa1026790 | 0.810546 | 1.092277e-50 | -8.615850e-47 |
Msa0195770 | Msa1036390 | 0.824747 | 6.825763e-54 | -8.615850e-47 |
Msa0195770 | Msa1037700 | -0.814228 | 1.714736e-51 | -8.615850e-47 |
Msa0195770 | Msa1038050 | 0.814247 | 1.698301e-51 | -8.615850e-47 |
Msa0195770 | Msa1043920 | 0.811123 | 8.194675e-51 | -8.615850e-47 |
Msa0195770 | Msa1055430 | 0.817214 | 3.704133e-52 | -8.615850e-47 |
Msa0195770 | Msa1056640 | 0.800085 | 1.700342e-48 | -8.615850e-47 |
Msa0195770 | Msa1068200 | -0.849344 | 3.435130e-60 | -8.615850e-47 |
Msa0195770 | Msa1072350 | 0.802923 | 4.455990e-49 | -8.615850e-47 |
Msa0195770 | Msa1075080 | -0.811778 | 5.905400e-51 | -8.615850e-47 |
Msa0195770 | Msa1075220 | -0.866821 | 2.153604e-65 | -8.615850e-47 |
Msa0195770 | Msa1076680 | 0.811377 | 7.216496e-51 | -8.615850e-47 |
Msa0195770 | Msa1077390 | 0.810549 | 1.090785e-50 | -8.615850e-47 |
Msa0195770 | Msa1080160 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
Msa0195770 | Msa1082500 | 0.833026 | 6.753573e-56 | -8.615850e-47 |
Msa0195770 | Msa1083410 | 0.806360 | 8.544294e-50 | -8.615850e-47 |
Msa0195770 | Msa1084260 | 0.810999 | 8.717172e-51 | -8.615850e-47 |
Msa0195770 | Msa1087470 | 0.817944 | 2.535161e-52 | -8.615850e-47 |
Msa0195770 | Msa1090260 | 0.809665 | 1.690866e-50 | -8.615850e-47 |
Msa0195770 | Msa1098560 | 0.840363 | 9.095594e-58 | -8.615850e-47 |
Msa0195770 | Msa1104000 | 0.811317 | 7.438519e-51 | -8.615850e-47 |
Msa0195770 | Msa1113200 | 0.813869 | 2.057503e-51 | -8.615850e-47 |
Msa0195770 | Msa1116130 | -0.859383 | 4.296738e-63 | -8.615850e-47 |
Msa0195770 | Msa1121660 | 0.800060 | 1.720509e-48 | -8.615850e-47 |
Msa0195770 | Msa1122250 | 0.810000 | 1.432387e-50 | -8.615850e-47 |
Msa0195770 | Msa1131940 | -0.837778 | 4.251769e-57 | -8.615850e-47 |
Msa0195770 | Msa1139000 | -0.849722 | 2.695008e-60 | -8.615850e-47 |
Msa0195770 | Msa1143270 | 0.807584 | 4.706703e-50 | -8.615850e-47 |
Msa0195770 | Msa1144390 | 0.807916 | 4.000009e-50 | -8.615850e-47 |
Msa0195770 | Msa1147570 | 0.807015 | 6.214015e-50 | -8.615850e-47 |
Msa0195770 | Msa1151730 | 0.802250 | 6.132771e-49 | -8.615850e-47 |
Msa0195770 | Msa1155470 | 0.809269 | 2.056796e-50 | -8.615850e-47 |
Msa0195770 | Msa1156340 | -0.833302 | 5.765832e-56 | -8.615850e-47 |
Msa0195770 | Msa1162550 | -0.863421 | 2.520287e-64 | -8.615850e-47 |
Msa0195770 | Msa1166500 | -0.802442 | 5.600561e-49 | -8.615850e-47 |
Msa0195770 | Msa1167110 | -0.816837 | 4.500519e-52 | -8.615850e-47 |
Msa0195770 | Msa1167220 | 0.816030 | 6.822893e-52 | -8.615850e-47 |
Msa0195770 | Msa1170730 | 0.835178 | 1.952283e-56 | -8.615850e-47 |
Msa0195770 | Msa1172670 | 0.811733 | 6.039477e-51 | -8.615850e-47 |
Msa0195770 | Msa1179120 | 0.814685 | 1.358440e-51 | -8.615850e-47 |
Msa0195770 | Msa1181550 | 0.829086 | 6.267332e-55 | -8.615850e-47 |
Msa0195770 | Msa1184730 | 0.809933 | 1.480966e-50 | -8.615850e-47 |
Msa0195770 | Msa1186550 | 0.822546 | 2.235432e-53 | -8.615850e-47 |
Msa0195770 | Msa1188420 | 0.841352 | 5.007261e-58 | -8.615850e-47 |
Msa0195770 | Msa1199560 | 0.836682 | 8.107929e-57 | -8.615850e-47 |
Msa0195770 | Msa1204980 | -0.840727 | 7.307036e-58 | -8.615850e-47 |
Msa0195770 | Msa1205010 | -0.845050 | 5.170256e-59 | -8.615850e-47 |
Msa0195770 | Msa1205130 | 0.851772 | 7.139475e-61 | -8.615850e-47 |
Msa0195770 | Msa1206020 | 0.800357 | 1.496858e-48 | -8.615850e-47 |
Msa0195770 | Msa1211110 | 0.826542 | 2.562439e-54 | -8.615850e-47 |
Msa0195770 | Msa1211150 | -0.802853 | 4.605411e-49 | -8.615850e-47 |
Msa0195770 | Msa1217810 | 0.804993 | 1.654310e-49 | -8.615850e-47 |
Msa0195770 | Msa1217860 | 0.801609 | 8.305490e-49 | -8.615850e-47 |
Msa0195770 | Msa1220230 | 0.802056 | 6.722829e-49 | -8.615850e-47 |
Msa0195770 | Msa1222970 | 0.818749 | 1.666204e-52 | -8.615850e-47 |
Msa0195770 | Msa1226660 | 0.800057 | 1.722492e-48 | -8.615850e-47 |
Msa0195770 | Msa1228210 | 0.825028 | 5.861317e-54 | -8.615850e-47 |
Msa0195770 | Msa1229600 | 0.834087 | 3.671324e-56 | -8.615850e-47 |
Msa0195770 | Msa1233500 | 0.840521 | 8.272374e-58 | -8.615850e-47 |
Msa0195770 | Msa1233890 | 0.827369 | 1.625512e-54 | -8.615850e-47 |
Msa0195770 | Msa1239530 | 0.800069 | 1.713423e-48 | -8.615850e-47 |
Msa0195770 | Msa1242220 | 0.807377 | 5.207921e-50 | -8.615850e-47 |
Msa0195770 | Msa1244250 | 0.801566 | 8.476204e-49 | -8.615850e-47 |
Msa0195770 | Msa1245310 | 0.813419 | 2.584023e-51 | -8.615850e-47 |
Msa0195770 | Msa1249490 | 0.810047 | 1.399591e-50 | -8.615850e-47 |
Msa0195770 | Msa1254950 | 0.826642 | 2.425975e-54 | -8.615850e-47 |
Msa0195770 | Msa1256540 | -0.842360 | 2.711809e-58 | -8.615850e-47 |
Msa0195770 | Msa1264020 | 0.810975 | 8.822078e-51 | -8.615850e-47 |
Msa0195770 | Msa1265960 | 0.802387 | 5.746989e-49 | -8.615850e-47 |
Msa0195770 | Msa1271280 | 0.830378 | 3.037908e-55 | -8.615850e-47 |
Msa0195770 | Msa1271290 | 0.803684 | 3.100052e-49 | -8.615850e-47 |
Msa0195770 | Msa1271300 | 0.838280 | 3.158245e-57 | -8.615850e-47 |
Msa0195770 | Msa1275770 | 0.832829 | 7.559848e-56 | -8.615850e-47 |
Msa0195770 | Msa1278840 | 0.821628 | 3.649154e-53 | -8.615850e-47 |
Msa0195770 | Msa1279210 | 0.831545 | 1.570896e-55 | -8.615850e-47 |
Msa0195770 | Msa1279650 | 0.800862 | 1.180730e-48 | -8.615850e-47 |
Msa0195770 | Msa1280130 | 0.840948 | 6.393616e-58 | -8.615850e-47 |
Msa0195770 | Msa1283860 | 0.820534 | 6.518206e-53 | -8.615850e-47 |
Msa0195770 | Msa1284140 | 0.821473 | 3.963306e-53 | -8.615850e-47 |
Msa0195770 | Msa1284710 | 0.803695 | 3.083743e-49 | -8.615850e-47 |
Msa0195770 | Msa1295690 | 0.813553 | 2.415226e-51 | -8.615850e-47 |
Msa0195770 | Msa1296960 | -0.839043 | 2.006521e-57 | -8.615850e-47 |
Msa0195770 | Msa1297090 | 0.802449 | 5.581844e-49 | -8.615850e-47 |
Msa0195770 | Msa1308380 | 0.802621 | 5.143551e-49 | -8.615850e-47 |
Msa0195770 | Msa1310210 | 0.821900 | 3.156886e-53 | -8.615850e-47 |
Msa0195770 | Msa1312560 | 0.846034 | 2.798080e-59 | -8.615850e-47 |
Msa0195770 | Msa1313150 | 0.802888 | 4.529621e-49 | -8.615850e-47 |
Msa0195770 | Msa1314170 | 0.804779 | 1.834003e-49 | -8.615850e-47 |
Msa0195770 | Msa1314340 | 0.818409 | 1.989607e-52 | -8.615850e-47 |
Msa0195770 | Msa1316560 | -0.813598 | 2.360551e-51 | -8.615850e-47 |
Msa0195770 | Msa1318240 | 0.817869 | 2.636778e-52 | -8.615850e-47 |
Msa0195770 | Msa1318990 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
Msa0195770 | Msa1321350 | 0.815257 | 1.014452e-51 | -8.615850e-47 |
Msa0195770 | Msa1322860 | 0.800075 | 1.708549e-48 | -8.615850e-47 |
Msa0195770 | Msa1322890 | 0.816833 | 4.511119e-52 | -8.615850e-47 |
Msa0195770 | Msa1324780 | 0.815266 | 1.009431e-51 | -8.615850e-47 |
Msa0195770 | Msa1328700 | 0.833408 | 5.426119e-56 | -8.615850e-47 |
Msa0195770 | Msa1329990 | 0.803741 | 3.016539e-49 | -8.615850e-47 |
Msa0195770 | Msa1340650 | 0.863115 | 3.134588e-64 | -8.615850e-47 |
Msa0195770 | Msa1350840 | 0.808702 | 2.719535e-50 | -8.615850e-47 |
Msa0195770 | Msa1357530 | 0.811937 | 5.453770e-51 | -8.615850e-47 |
Msa0195770 | Msa1358870 | -0.808788 | 2.607356e-50 | -8.615850e-47 |
Msa0195770 | Msa1365040 | -0.826723 | 2.320183e-54 | -8.615850e-47 |
Msa0195770 | Msa1367080 | 0.818185 | 2.236650e-52 | -8.615850e-47 |
Msa0195770 | Msa1369530 | 0.838749 | 2.389678e-57 | -8.615850e-47 |
Msa0195770 | Msa1371430 | 0.810598 | 1.064511e-50 | -8.615850e-47 |
Msa0195770 | Msa1376890 | 0.829362 | 5.369658e-55 | -8.615850e-47 |
Msa0195770 | Msa1378760 | 0.805758 | 1.143468e-49 | -8.615850e-47 |
Msa0195770 | Msa1384350 | 0.831348 | 1.756599e-55 | -8.615850e-47 |
Msa0195770 | Msa1390050 | 0.813114 | 3.015350e-51 | -8.615850e-47 |
Msa0195770 | Msa1392260 | 0.811757 | 5.969097e-51 | -8.615850e-47 |
Msa0195770 | Msa1393040 | 0.801285 | 9.675718e-49 | -8.615850e-47 |
Msa0195770 | Msa1393410 | 0.839229 | 1.795274e-57 | -8.615850e-47 |
Msa0195770 | Msa1403930 | -0.801788 | 7.632556e-49 | -8.615850e-47 |
Msa0195770 | Msa1404540 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
Msa0195770 | Msa1404670 | 0.805850 | 1.094034e-49 | -8.615850e-47 |
Msa0195770 | Msa1408790 | 0.826107 | 3.252784e-54 | -8.615850e-47 |
Msa0195770 | Msa1409870 | 0.808209 | 3.465594e-50 | -8.615850e-47 |
Msa0195770 | Msa1411090 | 0.814565 | 1.444113e-51 | -8.615850e-47 |
Msa0195770 | Msa1414740 | 0.819025 | 1.441953e-52 | -8.615850e-47 |
Msa0195770 | Msa1423880 | 0.823768 | 1.159469e-53 | -8.615850e-47 |
Msa0195770 | Msa1431000 | 0.804376 | 2.225265e-49 | -8.615850e-47 |
Msa0195770 | Msa1431430 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
Msa0195770 | Msa1435420 | 0.833874 | 4.149898e-56 | -8.615850e-47 |
Msa0195770 | Msa1436040 | 0.825706 | 4.049178e-54 | -8.615850e-47 |
Msa0195770 | Msa1438270 | 0.824022 | 1.010671e-53 | -8.615850e-47 |
Msa0195770 | Msa1441190 | 0.812011 | 5.254196e-51 | -8.615850e-47 |
Msa0195770 | Msa1445610 | -0.815238 | 1.024306e-51 | -8.615850e-47 |
Msa0195770 | Msa1451620 | -0.835329 | 1.788355e-56 | -8.615850e-47 |
Msa0195770 | Msa1453710 | 0.809964 | 1.458506e-50 | -8.615850e-47 |
Msa0195770 | Msa1454120 | 0.826278 | 2.961180e-54 | -8.615850e-47 |
Msa0195770 | Msa1455390 | 0.804200 | 2.421618e-49 | -8.615850e-47 |
Msa0195770 | Msa1456810 | 0.817299 | 3.543223e-52 | -8.615850e-47 |
Msa0195770 | Msa1457670 | -0.834816 | 2.408283e-56 | -8.615850e-47 |
Msa0195770 | Msa1458550 | 0.808399 | 3.156246e-50 | -8.615850e-47 |
Msa0195770 | Msa1458900 | 0.803400 | 3.549282e-49 | -8.615850e-47 |
Msa0195770 | Msa1461250 | -0.820888 | 5.407160e-53 | -8.615850e-47 |
Msa0195770 | Msa1464560 | 0.821099 | 4.833605e-53 | -8.615850e-47 |
Msa0195770 | Msa1464940 | 0.841989 | 3.399118e-58 | -8.615850e-47 |
Msa0195770 | Msa1465900 | 0.806681 | 7.310020e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195770 | MtrunA17_Chr2g0287011 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 684 |
Msa0195770 | MtrunA17_Chr4g0020191 | 71.920 | 349 | 83 | 7 | 1 | 339 | 1 | 344 | 2.10e-156 | 442 |
Msa0195770 | MtrunA17_Chr4g0076031 | 48.057 | 283 | 144 | 2 | 53 | 334 | 1 | 281 | 3.26e-90 | 271 |
Msa0195770 | MtrunA17_Chr2g0290111 | 42.813 | 327 | 183 | 3 | 10 | 334 | 8 | 332 | 1.22e-88 | 269 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195770 | AT5G18940.1 | 78.947 | 323 | 68 | 0 | 1 | 323 | 1 | 323 | 0.0 | 530 |
Msa0195770 | AT5G18940.2 | 78.328 | 323 | 68 | 1 | 1 | 323 | 1 | 321 | 0.0 | 520 |
Msa0195770 | AT5G47540.1 | 44.411 | 331 | 176 | 4 | 9 | 334 | 7 | 334 | 2.22e-92 | 279 |
Msa0195770 | AT4G17270.1 | 43.202 | 331 | 180 | 4 | 9 | 334 | 7 | 334 | 9.91e-91 | 275 |
Msa0195770 | AT2G03410.1 | 39.466 | 337 | 195 | 5 | 9 | 339 | 7 | 340 | 2.29e-72 | 228 |
Find 71 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGTCGTTCTCGTTCTTTA+AGG | 0.218679 | 2_1:+12693974 | Msa0195770:exon |
TTTACATCTCGCGGCTTATT+AGG | 0.268568 | 2_1:-12698962 | None:intergenic |
ACAATGAGAACTATGCTTTC+TGG | 0.269593 | 2_1:+12695074 | Msa0195770:CDS |
TGCCTCCTTGTGACATAATT+AGG | 0.329250 | 2_1:-12698125 | None:intergenic |
TTTAACTTCAACAACAGTTT+TGG | 0.330848 | 2_1:-12694063 | None:intergenic |
ACCAAGAAAATATAGTAATA+AGG | 0.337120 | 2_1:+12699524 | Msa0195770:three_prime_UTR |
ATATCTTACTTTGCAAGATT+CGG | 0.337851 | 2_1:-12696583 | None:intergenic |
TACTTTATTGTAGGCTTTAG+AGG | 0.341874 | 2_1:+12695031 | Msa0195770:intron |
ATAAATTTAGCTTCTCCTAA+TGG | 0.349788 | 2_1:+12699607 | Msa0195770:three_prime_UTR |
ATTCACAAGTTGCCTATACT+TGG | 0.363293 | 2_1:+12695179 | Msa0195770:CDS |
CGCTTCATTATCTGAGCATT+GGG | 0.365807 | 2_1:-12698288 | None:intergenic |
GGGTGTTCTCAGATACATAT+TGG | 0.370824 | 2_1:+12696917 | Msa0195770:intron |
ATCAAATCTAAACAGTTTAG+AGG | 0.372849 | 2_1:-12699649 | None:intergenic |
TAGCTTCTCCTAATGGTGTT+GGG | 0.378725 | 2_1:+12699614 | Msa0195770:three_prime_UTR |
TGAAAAGAAAGAAATGAAAA+TGG | 0.396672 | 2_1:-12693902 | None:intergenic |
GAGCTCTGGCATAATGTTGC+GGG | 0.412362 | 2_1:+12696546 | Msa0195770:CDS |
AATCTCAACCCAACACCATT+AGG | 0.416234 | 2_1:-12699622 | None:intergenic |
GTGTGTTTCTAGATGTTGTT+GGG | 0.422839 | 2_1:-12693926 | None:intergenic |
TGTGTGTTTCTAGATGTTGT+TGG | 0.429825 | 2_1:-12693927 | None:intergenic |
TGTGAAACCTGATCTAAATT+CGG | 0.430120 | 2_1:-12695113 | None:intergenic |
ATCAGAACCGAATTTAGATC+AGG | 0.437545 | 2_1:+12695106 | Msa0195770:CDS |
CACAAGGAGGCAGTCTATAA+AGG | 0.441867 | 2_1:+12698136 | Msa0195770:CDS |
GACGATATTGTTGAAACAAA+AGG | 0.442977 | 2_1:+12695319 | Msa0195770:CDS |
AAAGAAATTGCCCTGAGCTC+TGG | 0.447061 | 2_1:+12696532 | Msa0195770:CDS |
GTATTCTACACAGCAATCAT+TGG | 0.448420 | 2_1:-12695348 | None:intergenic |
CTTACTTCCCATCCAAGTAT+AGG | 0.450135 | 2_1:-12695191 | None:intergenic |
ATTCGCTAAGATCTTGATAC+TGG | 0.454245 | 2_1:+12699563 | Msa0195770:three_prime_UTR |
ATTACTTCATAATCTATCTC+CGG | 0.460743 | 2_1:+12699021 | Msa0195770:CDS |
GTCTATCAAAGAGAGTCTTA+TGG | 0.461061 | 2_1:+12694031 | Msa0195770:CDS |
GCAACATTATGCCAGAGCTC+AGG | 0.463232 | 2_1:-12696543 | None:intergenic |
AGAACTATGCTTTCTGGAGA+TGG | 0.464715 | 2_1:+12695080 | Msa0195770:CDS |
TCTCGTTCTTTAAGGTTTCG+AGG | 0.472625 | 2_1:+12693982 | Msa0195770:CDS |
CAGTTGCATGTTTAGAAAGA+AGG | 0.473512 | 2_1:-12697131 | None:intergenic |
ACGCTTCATTATCTGAGCAT+TGG | 0.476990 | 2_1:-12698289 | None:intergenic |
TTAGCTTCTCCTAATGGTGT+TGG | 0.478686 | 2_1:+12699613 | Msa0195770:three_prime_UTR |
CCTTCTTTCTTCCACTTCGA+TGG | 0.479876 | 2_1:+12693780 | Msa0195770:five_prime_UTR |
CATAATCTATCTCCGGGAAA+AGG | 0.480348 | 2_1:+12699028 | Msa0195770:CDS |
TTCAAATCTAATTTGATGCA+AGG | 0.482900 | 2_1:+12699312 | Msa0195770:three_prime_UTR |
CTTTGATACTAAAAGTAAGT+AGG | 0.493693 | 2_1:+12699460 | Msa0195770:three_prime_UTR |
TACTAGACTTTCTTGTTGCA+TGG | 0.494982 | 2_1:+12695390 | Msa0195770:CDS |
ACAAGTTGCCTATACTTGGA+TGG | 0.498032 | 2_1:+12695183 | Msa0195770:CDS |
GAAAGGATTTAGTCCACTGT+TGG | 0.511448 | 2_1:+12695297 | Msa0195770:CDS |
CAAGTTGCCTATACTTGGAT+GGG | 0.523597 | 2_1:+12695184 | Msa0195770:CDS |
AGATCAGGTTTCACAGCTTG+TGG | 0.526178 | 2_1:+12695121 | Msa0195770:CDS |
TCAGATGCTACATCGAAGTT+AGG | 0.532582 | 2_1:-12696981 | None:intergenic |
CCATCGAAGTGGAAGAAAGA+AGG | 0.535417 | 2_1:-12693780 | None:intergenic |
AGAAGATGAGCAATTTGAAG+AGG | 0.542432 | 2_1:+12699187 | Msa0195770:CDS |
TGAGCTCTGGCATAATGTTG+CGG | 0.544211 | 2_1:+12696545 | Msa0195770:CDS |
TTACTTCATAATCTATCTCC+GGG | 0.560293 | 2_1:+12699022 | Msa0195770:CDS |
CAACATTATGCCAGAGCTCA+GGG | 0.566104 | 2_1:-12696542 | None:intergenic |
ACTTCGATGGTATTGCTATG+TGG | 0.580552 | 2_1:+12693793 | Msa0195770:five_prime_UTR |
TTCGAGGCCTAAAACGCCGC+AGG | 0.582226 | 2_1:+12693998 | Msa0195770:CDS |
TGAAGTTAAAGCTCTTGAGA+AGG | 0.595727 | 2_1:+12694076 | Msa0195770:CDS |
TCTGTGAGCAAGTAATGTGT+TGG | 0.610638 | 2_1:+12699349 | Msa0195770:three_prime_UTR |
ACATAGCAATACCATCGAAG+TGG | 0.612537 | 2_1:-12693791 | None:intergenic |
TAATTCTAGGGAAGAACAAG+GGG | 0.613993 | 2_1:+12698987 | Msa0195770:CDS |
AGTCATGATGACATTGTTGA+CGG | 0.620587 | 2_1:+12698338 | Msa0195770:CDS |
ATAATTCTAGGGAAGAACAA+GGG | 0.620745 | 2_1:+12698986 | Msa0195770:CDS |
TCAGGTTTCACAGCTTGTGG+AGG | 0.621980 | 2_1:+12695124 | Msa0195770:CDS |
TTGATGCAAGGATTTCATGT+TGG | 0.626855 | 2_1:+12699324 | Msa0195770:three_prime_UTR |
AATAATTCTAGGGAAGAACA+AGG | 0.636933 | 2_1:+12698985 | Msa0195770:CDS |
CATCTCCTAATTATGTCACA+AGG | 0.648740 | 2_1:+12698120 | Msa0195770:CDS |
TTCAAATCTGACCTTAAACG+TGG | 0.653367 | 2_1:-12697012 | None:intergenic |
GCTTGTGGAGGAAATCTGCA+AGG | 0.666944 | 2_1:+12695136 | Msa0195770:CDS |
AAAGAAAGAAATGAAAATGG+TGG | 0.669721 | 2_1:-12693899 | None:intergenic |
TTTGACAACTCACTACGATG+AGG | 0.670117 | 2_1:+12697167 | Msa0195770:CDS |
TGAGCAAGTAATGTGTTGGA+AGG | 0.678382 | 2_1:+12699353 | Msa0195770:three_prime_UTR |
ATAGACTTGACAACTTCCTG+CGG | 0.688823 | 2_1:-12694014 | None:intergenic |
TCAACAATATCGTCCAACAG+TGG | 0.704888 | 2_1:-12695310 | None:intergenic |
CTCCTAATTATGTCACAAGG+AGG | 0.705583 | 2_1:+12698123 | Msa0195770:CDS |
TGTGGAGGAAATCTGCAAGG+AGG | 0.743747 | 2_1:+12695139 | Msa0195770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTATTTTCACAAAATT+GGG | - | chr2_1:12694569-12694588 | None:intergenic | 10.0% |
!! | TAAAATTACTCATAAATATA+TGG | + | chr2_1:12694729-12694748 | Msa0195770:intron | 10.0% |
!! | AATTAAGAGATATTTAAAAA+AGG | - | chr2_1:12697852-12697871 | None:intergenic | 10.0% |
!! | AACAATTGAATTTAATTATA+TGG | + | chr2_1:12698231-12698250 | Msa0195770:intron | 10.0% |
!!! | ATTTATTTGATGTTATTTTA+TGG | + | chr2_1:12698489-12698508 | Msa0195770:intron | 10.0% |
!! | TATTACAATACTAATAAAAA+TGG | - | chr2_1:12699406-12699425 | None:intergenic | 10.0% |
!!! | AATTGAAAATTTAGAACAAA+GGG | - | chr2_1:12694135-12694154 | None:intergenic | 15.0% |
!!! | TAATTGAAAATTTAGAACAA+AGG | - | chr2_1:12694136-12694155 | None:intergenic | 15.0% |
!!! | CTATTTTATTTTCACAAAAT+TGG | - | chr2_1:12694570-12694589 | None:intergenic | 15.0% |
!!! | TTTTGTGAAAATAAAATAGT+TGG | + | chr2_1:12694571-12694590 | Msa0195770:intron | 15.0% |
!! | AATATATAATGTTTCCAATT+TGG | - | chr2_1:12695540-12695559 | None:intergenic | 15.0% |
!! | AAATTGGAAACATTATATAT+TGG | + | chr2_1:12695539-12695558 | Msa0195770:intron | 15.0% |
!!! | TCTTTTAATAATTGCTTTAA+AGG | - | chr2_1:12695906-12695925 | None:intergenic | 15.0% |
!!! | TTAATTTTCTTGTTTTGTTA+AGG | + | chr2_1:12695991-12696010 | Msa0195770:intron | 15.0% |
!!! | AAAATGATTTTTCTAAAATC+AGG | + | chr2_1:12696365-12696384 | Msa0195770:intron | 15.0% |
!! | AAAAAAGTAGATTCTAATAT+TGG | + | chr2_1:12696718-12696737 | Msa0195770:intron | 15.0% |
!! | AAAAAGTAGATTCTAATATT+GGG | + | chr2_1:12696719-12696738 | Msa0195770:intron | 15.0% |
!! | TTGATTATCAATGATTATTT+AGG | + | chr2_1:12696824-12696843 | Msa0195770:intron | 15.0% |
!!! | TTTTAACTTTCTGATTTTTT+TGG | + | chr2_1:12696896-12696915 | Msa0195770:intron | 15.0% |
!!! | TTTAACTTTCTGATTTTTTT+GGG | + | chr2_1:12696897-12696916 | Msa0195770:intron | 15.0% |
!! | TTTAACATATATGTAACAAA+CGG | - | chr2_1:12697388-12697407 | None:intergenic | 15.0% |
!! | GACAAAAAAAGTTAAAAAAT+TGG | + | chr2_1:12697423-12697442 | Msa0195770:intron | 15.0% |
!! | TATGATAAAAAAACACAAAA+TGG | + | chr2_1:12697820-12697839 | Msa0195770:intron | 15.0% |
!! | TTGTTTATAATCATAACAAA+TGG | + | chr2_1:12697892-12697911 | Msa0195770:intron | 15.0% |
!! | CATGTACATAAAAAAAAAAA+AGG | - | chr2_1:12698205-12698224 | None:intergenic | 15.0% |
!!! | TCGAATTTTTTTTTAATAAC+AGG | + | chr2_1:12698753-12698772 | Msa0195770:intron | 15.0% |
!! | TTTAATGTATTTATTCTAGT+TGG | + | chr2_1:12698792-12698811 | Msa0195770:intron | 15.0% |
!!! | TATTAATTTTATCTCTTTTG+CGG | + | chr2_1:12699153-12699172 | Msa0195770:intron | 15.0% |
!! | CTTAATTATAAACAAAAAGT+AGG | + | chr2_1:12699489-12699508 | Msa0195770:three_prime_UTR | 15.0% |
!! | TGAAAAGAAAGAAATGAAAA+TGG | - | chr2_1:12693905-12693924 | None:intergenic | 20.0% |
!!! | ATTGAAAATTTAGAACAAAG+GGG | - | chr2_1:12694134-12694153 | None:intergenic | 20.0% |
!!! | AAATTTTCAATTACTCTATC+TGG | + | chr2_1:12694143-12694162 | Msa0195770:intron | 20.0% |
!!! | AATTTTCAATTACTCTATCT+GGG | + | chr2_1:12694144-12694163 | Msa0195770:intron | 20.0% |
!! | ATAATTGTCTCTTTATAAGA+AGG | + | chr2_1:12694500-12694519 | Msa0195770:intron | 20.0% |
!! | CATAGATCATTGAAAAATTA+TGG | + | chr2_1:12695771-12695790 | Msa0195770:intron | 20.0% |
!! | TATATCTCTATAATATTCTC+GGG | - | chr2_1:12696187-12696206 | None:intergenic | 20.0% |
!! | CTATATCTCTATAATATTCT+CGG | - | chr2_1:12696188-12696207 | None:intergenic | 20.0% |
!!! | TAAAATTGATTCATGCAAAA+CGG | + | chr2_1:12696318-12696337 | Msa0195770:intron | 20.0% |
!! | TCCAAAATATATGTATGAAA+TGG | - | chr2_1:12697093-12697112 | None:intergenic | 20.0% |
!! | TAAATAATAATAACCACTGT+TGG | + | chr2_1:12697352-12697371 | Msa0195770:intron | 20.0% |
!! | AAATAATAATAACCACTGTT+GGG | + | chr2_1:12697353-12697372 | Msa0195770:intron | 20.0% |
!! | ATACAATAAGAAATGAACTT+TGG | - | chr2_1:12698841-12698860 | None:intergenic | 20.0% |
!! | AAAACTAAAACTCAAATGAT+TGG | - | chr2_1:12698903-12698922 | None:intergenic | 20.0% |
!! | GAGATGTAAAAATAATTCTA+GGG | + | chr2_1:12698975-12698994 | Msa0195770:CDS | 20.0% |
!! | ATTATAAACAAAAAGTAGGT+AGG | + | chr2_1:12699493-12699512 | Msa0195770:three_prime_UTR | 20.0% |
!! | ACCAAGAAAATATAGTAATA+AGG | + | chr2_1:12699524-12699543 | Msa0195770:three_prime_UTR | 20.0% |
!!! | ACCTTATTACTATATTTTCT+TGG | - | chr2_1:12699528-12699547 | None:intergenic | 20.0% |
! | AAAGAAAGAAATGAAAATGG+TGG | - | chr2_1:12693902-12693921 | None:intergenic | 25.0% |
!!! | TTTAACTTCAACAACAGTTT+TGG | - | chr2_1:12694066-12694085 | None:intergenic | 25.0% |
!!! | AAAGTTTCCGTTTTTAATCA+TGG | + | chr2_1:12694184-12694203 | Msa0195770:intron | 25.0% |
!!! | AAGTTTCCGTTTTTAATCAT+GGG | + | chr2_1:12694185-12694204 | Msa0195770:intron | 25.0% |
! | TACATACCCATGATTAAAAA+CGG | - | chr2_1:12694194-12694213 | None:intergenic | 25.0% |
!!! | TTGTTGTTAAGTAGTTTTGT+TGG | + | chr2_1:12694308-12694327 | Msa0195770:intron | 25.0% |
!! | AAAGAAGATAGCATTTTGTT+TGG | + | chr2_1:12694611-12694630 | Msa0195770:intron | 25.0% |
!!! | AAGAAGATAGCATTTTGTTT+GGG | + | chr2_1:12694612-12694631 | Msa0195770:intron | 25.0% |
! | AATATATGGAAAATGCTTGT+TGG | + | chr2_1:12694743-12694762 | Msa0195770:intron | 25.0% |
!!! | TGCTTGTTTTACTTTATTGT+AGG | + | chr2_1:12695022-12695041 | Msa0195770:intron | 25.0% |
!! | GTTTTTCTTTCAATGTCTTT+TGG | + | chr2_1:12695561-12695580 | Msa0195770:intron | 25.0% |
!!! | AATTTTTCAGACTTCTTATC+AGG | - | chr2_1:12695596-12695615 | None:intergenic | 25.0% |
! | GATAAGAAGTCTGAAAAATT+TGG | + | chr2_1:12695596-12695615 | Msa0195770:intron | 25.0% |
! | ATATTCAGTTCTTCGAAAAT+TGG | - | chr2_1:12695722-12695741 | None:intergenic | 25.0% |
!! | TAGAACATTATGTCATCTTT+TGG | - | chr2_1:12695750-12695769 | None:intergenic | 25.0% |
! | ACTTTCTACTCTAAATTTAG+CGG | - | chr2_1:12695934-12695953 | None:intergenic | 25.0% |
!!! | TTTCTTGTTTTGTTAAGGAT+TGG | + | chr2_1:12695996-12696015 | Msa0195770:intron | 25.0% |
!!! | TCCATTTTGAAATGAGTTTT+TGG | + | chr2_1:12696076-12696095 | Msa0195770:intron | 25.0% |
! | TCCAAAAACTCATTTCAAAA+TGG | - | chr2_1:12696080-12696099 | None:intergenic | 25.0% |
! | ATATCTCTATAATATTCTCG+GGG | - | chr2_1:12696186-12696205 | None:intergenic | 25.0% |
! | TATTATAGAGATATAGCATG+TGG | + | chr2_1:12696192-12696211 | Msa0195770:intron | 25.0% |
! | GAAATAAACTTTCAAGGAAA+AGG | - | chr2_1:12696228-12696247 | None:intergenic | 25.0% |
! | GAAAGAGAAATAAACTTTCA+AGG | - | chr2_1:12696234-12696253 | None:intergenic | 25.0% |
!! | TACTTTGAAGATTATAGTCT+AGG | + | chr2_1:12696290-12696309 | Msa0195770:intron | 25.0% |
!! | ACTTTGAAGATTATAGTCTA+GGG | + | chr2_1:12696291-12696310 | Msa0195770:intron | 25.0% |
!! | AATTTCTTTGTTATCATAGC+TGG | - | chr2_1:12696521-12696540 | None:intergenic | 25.0% |
! | ATATCTTACTTTGCAAGATT+CGG | - | chr2_1:12696586-12696605 | None:intergenic | 25.0% |
!! | TCTTGCAAAGTAAGATATTT+TGG | + | chr2_1:12696588-12696607 | Msa0195770:intron | 25.0% |
!! | CTTGCAAAGTAAGATATTTT+GGG | + | chr2_1:12696589-12696608 | Msa0195770:intron | 25.0% |
! | AATATTGGGATAATATACTG+TGG | + | chr2_1:12696733-12696752 | Msa0195770:intron | 25.0% |
! | TCATGCAATCTATTAGAAAA+AGG | + | chr2_1:12696857-12696876 | Msa0195770:intron | 25.0% |
! | ACATCAAGATAAGTAGTTAT+GGG | - | chr2_1:12697060-12697079 | None:intergenic | 25.0% |
! | AACATCAAGATAAGTAGTTA+TGG | - | chr2_1:12697061-12697080 | None:intergenic | 25.0% |
!! | GCCATTTCATACATATATTT+TGG | + | chr2_1:12697089-12697108 | Msa0195770:intron | 25.0% |
! | CAAATCAGATAAGTATGTTA+AGG | - | chr2_1:12697203-12697222 | None:intergenic | 25.0% |
!! | TATCTGATTTGAACATATGA+AGG | + | chr2_1:12697212-12697231 | Msa0195770:intron | 25.0% |
!! | AAAAAATTGGTTCAAATGAG+AGG | + | chr2_1:12697436-12697455 | Msa0195770:intron | 25.0% |
!!! | ACTTTTAAGTTGTTTGTTAG+CGG | - | chr2_1:12697589-12697608 | None:intergenic | 25.0% |
! | CTCATTGTATAAATTTGAAG+GGG | - | chr2_1:12698578-12698597 | None:intergenic | 25.0% |
! | GCTCATTGTATAAATTTGAA+GGG | - | chr2_1:12698579-12698598 | None:intergenic | 25.0% |
! | AGCTCATTGTATAAATTTGA+AGG | - | chr2_1:12698580-12698599 | None:intergenic | 25.0% |
!! | TTCTTTTATAAATCGCCAAA+AGG | - | chr2_1:12698606-12698625 | None:intergenic | 25.0% |
! | ACAAAACTTTACAAAGAATG+GGG | - | chr2_1:12698678-12698697 | None:intergenic | 25.0% |
! | CACAAAACTTTACAAAGAAT+GGG | - | chr2_1:12698679-12698698 | None:intergenic | 25.0% |
! | ACACAAAACTTTACAAAGAA+TGG | - | chr2_1:12698680-12698699 | None:intergenic | 25.0% |
!!! | AGAATTATTTTTACATCTCG+CGG | - | chr2_1:12698974-12698993 | None:intergenic | 25.0% |
! | CGAGATGTAAAAATAATTCT+AGG | + | chr2_1:12698974-12698993 | Msa0195770:CDS | 25.0% |
! | ATTACTTCATAATCTATCTC+CGG | + | chr2_1:12699021-12699040 | Msa0195770:CDS | 25.0% |
! | TTCAAATCTAATTTGATGCA+AGG | + | chr2_1:12699312-12699331 | Msa0195770:three_prime_UTR | 25.0% |
! | CTTTGATACTAAAAGTAAGT+AGG | + | chr2_1:12699460-12699479 | Msa0195770:three_prime_UTR | 25.0% |
!! | ATAAATTTAGCTTCTCCTAA+TGG | + | chr2_1:12699607-12699626 | Msa0195770:three_prime_UTR | 25.0% |
TTAGCGTGTAAATCACAAAT+GGG | - | chr2_1:12694105-12694124 | None:intergenic | 30.0% | |
ATTAGCGTGTAAATCACAAA+TGG | - | chr2_1:12694106-12694125 | None:intergenic | 30.0% | |
! | CTTAACAACAATCAGTTTTC+AGG | - | chr2_1:12694299-12694318 | None:intergenic | 30.0% |
GTTACTTGTTTCGTAAATGA+AGG | + | chr2_1:12694411-12694430 | Msa0195770:intron | 30.0% | |
AACAGATATCATAACCCAAT+TGG | - | chr2_1:12694538-12694557 | None:intergenic | 30.0% | |
!! | GAGTAATTTTAGTGCTTGTT+TGG | - | chr2_1:12694720-12694739 | None:intergenic | 30.0% |
CAACAAAATGATAACACTCA+GGG | - | chr2_1:12694928-12694947 | None:intergenic | 30.0% | |
ACAACAAAATGATAACACTC+AGG | - | chr2_1:12694929-12694948 | None:intergenic | 30.0% | |
AATAACTGCAAGTAAGAGAA+AGG | - | chr2_1:12694979-12694998 | None:intergenic | 30.0% | |
! | TACTTTATTGTAGGCTTTAG+AGG | + | chr2_1:12695031-12695050 | Msa0195770:intron | 30.0% |
TGTGAAACCTGATCTAAATT+CGG | - | chr2_1:12695116-12695135 | None:intergenic | 30.0% | |
!! | AATTTTGATACAGGCTAGAA+AGG | + | chr2_1:12695280-12695299 | Msa0195770:intron | 30.0% |
GACGATATTGTTGAAACAAA+AGG | + | chr2_1:12695319-12695338 | Msa0195770:CDS | 30.0% | |
TAGTGACAACACATTGAAAA+AGG | - | chr2_1:12695469-12695488 | None:intergenic | 30.0% | |
GTTCGTAATTGTATTCAAGT+TGG | + | chr2_1:12695491-12695510 | Msa0195770:intron | 30.0% | |
!! | GTAATTGTATTCAAGTTGGT+TGG | + | chr2_1:12695495-12695514 | Msa0195770:intron | 30.0% |
! | AAGTCTGAAAAATTTGGTGA+AGG | + | chr2_1:12695602-12695621 | Msa0195770:intron | 30.0% |
!! | AAATTGGAGAAGCACTTTAA+TGG | - | chr2_1:12695706-12695725 | None:intergenic | 30.0% |
!!! | TGTTTTGTTAAGGATTGGTT+TGG | + | chr2_1:12696001-12696020 | Msa0195770:intron | 30.0% |
!! | AAATGAGTTTTTGGACGAAA+GGG | + | chr2_1:12696085-12696104 | Msa0195770:intron | 30.0% |
AGAAACAGAGATGAAGATAT+CGG | - | chr2_1:12696697-12696716 | None:intergenic | 30.0% | |
AGAAAGTTAAAACAGTGCAA+CGG | - | chr2_1:12696888-12696907 | None:intergenic | 30.0% | |
ATCAGATAAGTATGTTAAGG+AGG | - | chr2_1:12697200-12697219 | None:intergenic | 30.0% | |
TTGGTGAAAATATTCAACTG+AGG | - | chr2_1:12697273-12697292 | None:intergenic | 30.0% | |
! | TCAGTTGAATATTTTCACCA+AGG | + | chr2_1:12697272-12697291 | Msa0195770:intron | 30.0% |
CAACAGAAGTTGTAATAAAC+AGG | - | chr2_1:12697308-12697327 | None:intergenic | 30.0% | |
AAATAGCAAACGTTTACCAT+TGG | + | chr2_1:12697535-12697554 | Msa0195770:intron | 30.0% | |
!!! | CATGCTTTATTTTTACAGCA+TGG | - | chr2_1:12697616-12697635 | None:intergenic | 30.0% |
ATAACAAATGGAAAATCTCC+TGG | + | chr2_1:12697904-12697923 | Msa0195770:intron | 30.0% | |
! | ACTCGGTTAAATTATTTTCC+AGG | - | chr2_1:12697925-12697944 | None:intergenic | 30.0% |
!! | AAGTCTTATTAGAAAAGTGC+GGG | - | chr2_1:12698061-12698080 | None:intergenic | 30.0% |
!! | GAAGTCTTATTAGAAAAGTG+CGG | - | chr2_1:12698062-12698081 | None:intergenic | 30.0% |
!!! | ATATGGATTTTAGCTTCTCT+CGG | + | chr2_1:12698248-12698267 | Msa0195770:intron | 30.0% |
!!! | TGTTATTTTATGGATTGAGC+AGG | + | chr2_1:12698499-12698518 | Msa0195770:intron | 30.0% |
GAAAAATCACCTTGAAAATG+TGG | - | chr2_1:12698556-12698575 | None:intergenic | 30.0% | |
! | TTGATTAACGGGCATAAATA+TGG | - | chr2_1:12698635-12698654 | None:intergenic | 30.0% |
TCGCAGTTACATTTGATTAA+CGG | - | chr2_1:12698647-12698666 | None:intergenic | 30.0% | |
! | AATAATTCTAGGGAAGAACA+AGG | + | chr2_1:12698985-12699004 | Msa0195770:CDS | 30.0% |
! | ATAATTCTAGGGAAGAACAA+GGG | + | chr2_1:12698986-12699005 | Msa0195770:CDS | 30.0% |
TTACTTCATAATCTATCTCC+GGG | + | chr2_1:12699022-12699041 | Msa0195770:CDS | 30.0% | |
! | TCATCTGAATTTTCATTCTG+TGG | + | chr2_1:12699095-12699114 | Msa0195770:intron | 30.0% |
! | TTATCTCTTTTGCGGTTTTT+AGG | + | chr2_1:12699161-12699180 | Msa0195770:intron | 30.0% |
GGAAAAAGAGTTTATCATCA+AGG | + | chr2_1:12699208-12699227 | Msa0195770:CDS | 30.0% | |
!! | GTGTGTTTCTAGATGTTGTT+GGG | - | chr2_1:12693929-12693948 | None:intergenic | 35.0% |
!! | TGTGTGTTTCTAGATGTTGT+TGG | - | chr2_1:12693930-12693949 | None:intergenic | 35.0% |
GTCTATCAAAGAGAGTCTTA+TGG | + | chr2_1:12694031-12694050 | Msa0195770:CDS | 35.0% | |
TGAAGTTAAAGCTCTTGAGA+AGG | + | chr2_1:12694076-12694095 | Msa0195770:CDS | 35.0% | |
! | GAAAATTTAGAACAAAGGGG+TGG | - | chr2_1:12694131-12694150 | None:intergenic | 35.0% |
ACTTGTTTCGTAAATGAAGG+AGG | + | chr2_1:12694414-12694433 | Msa0195770:intron | 35.0% | |
AAGTCATCAATGCTTTCTGA+TGG | + | chr2_1:12694450-12694469 | Msa0195770:intron | 35.0% | |
CAATGCTTTCTGATGGAAAT+TGG | + | chr2_1:12694457-12694476 | Msa0195770:intron | 35.0% | |
!!! | AGGTCATTTTTGCTTCCAAT+TGG | + | chr2_1:12694520-12694539 | Msa0195770:intron | 35.0% |
!!! | GGTCATTTTTGCTTCCAATT+GGG | + | chr2_1:12694521-12694540 | Msa0195770:intron | 35.0% |
!! | TCTTTCAAGTTAATACAGCG+TGG | + | chr2_1:12694693-12694712 | Msa0195770:intron | 35.0% |
ATATCACTGGAACGTATCTA+TGG | - | chr2_1:12694952-12694971 | None:intergenic | 35.0% | |
! | AGAGAAAGGCATAATATCAC+TGG | - | chr2_1:12694965-12694984 | None:intergenic | 35.0% |
TACTTGCAGTTATTCTACAG+TGG | + | chr2_1:12694985-12695004 | Msa0195770:intron | 35.0% | |
AGTTATTCTACAGTGGTTAC+TGG | + | chr2_1:12694992-12695011 | Msa0195770:intron | 35.0% | |
ACAATGAGAACTATGCTTTC+TGG | + | chr2_1:12695074-12695093 | Msa0195770:CDS | 35.0% | |
ATCAGAACCGAATTTAGATC+AGG | + | chr2_1:12695106-12695125 | Msa0195770:CDS | 35.0% | |
ATTCACAAGTTGCCTATACT+TGG | + | chr2_1:12695179-12695198 | Msa0195770:CDS | 35.0% | |
GTATTCTACACAGCAATCAT+TGG | - | chr2_1:12695351-12695370 | None:intergenic | 35.0% | |
TACTAGACTTTCTTGTTGCA+TGG | + | chr2_1:12695390-12695409 | Msa0195770:CDS | 35.0% | |
TGAAAAAGGAGCAACAGAAA+AGG | - | chr2_1:12695455-12695474 | None:intergenic | 35.0% | |
! | ATGGCAGTTCCAACTTTTTA+TGG | + | chr2_1:12695790-12695809 | Msa0195770:intron | 35.0% |
TTAGAACCGCCATAAAAAGT+TGG | - | chr2_1:12695802-12695821 | None:intergenic | 35.0% | |
CTACTCTAAATTTAGCGGAA+AGG | - | chr2_1:12695929-12695948 | None:intergenic | 35.0% | |
GATTTAATGCACAGACAACT+AGG | - | chr2_1:12695960-12695979 | None:intergenic | 35.0% | |
GTTGTCTGTGCATTAAATCA+TGG | + | chr2_1:12695961-12695980 | Msa0195770:intron | 35.0% | |
TCTGTGCATTAAATCATGGA+TGG | + | chr2_1:12695965-12695984 | Msa0195770:intron | 35.0% | |
!! | GAAATGAGTTTTTGGACGAA+AGG | + | chr2_1:12696084-12696103 | Msa0195770:intron | 35.0% |
!! | AATGAGTTTTTGGACGAAAG+GGG | + | chr2_1:12696086-12696105 | Msa0195770:intron | 35.0% |
GGTTAAATTTGAATCGTGAG+CGG | - | chr2_1:12696151-12696170 | None:intergenic | 35.0% | |
!!! | TTCTCGGGGTAGTTTTAATT+TGG | - | chr2_1:12696172-12696191 | None:intergenic | 35.0% |
! | TCTTTGTTATCATAGCTGGT+TGG | - | chr2_1:12696517-12696536 | None:intergenic | 35.0% |
! | TGATGCATTTTCCACGTTTA+AGG | + | chr2_1:12697001-12697020 | Msa0195770:CDS | 35.0% |
TTCAAATCTGACCTTAAACG+TGG | - | chr2_1:12697015-12697034 | None:intergenic | 35.0% | |
!! | TTTGGATATGCTTGCTTTTC+AGG | + | chr2_1:12697107-12697126 | Msa0195770:intron | 35.0% |
CAGTTGCATGTTTAGAAAGA+AGG | - | chr2_1:12697134-12697153 | None:intergenic | 35.0% | |
! | TATTTTCACCAAGGAGATCA+AGG | + | chr2_1:12697281-12697300 | Msa0195770:intron | 35.0% |
! | ATTTTCACCAAGGAGATCAA+GGG | + | chr2_1:12697282-12697301 | Msa0195770:intron | 35.0% |
!!! | AAACGTTTGCTATTTTTCCG+CGG | - | chr2_1:12697530-12697549 | None:intergenic | 35.0% |
! | TTGTTTGTTAGCGGAAATCA+TGG | - | chr2_1:12697580-12697599 | None:intergenic | 35.0% |
TGACCAACTTGCAATTGTAA+TGG | + | chr2_1:12697660-12697679 | Msa0195770:intron | 35.0% | |
CATGTTCAAAGATGAGAGTA+GGG | - | chr2_1:12697981-12698000 | None:intergenic | 35.0% | |
ACATGTTCAAAGATGAGAGT+AGG | - | chr2_1:12697982-12698001 | None:intergenic | 35.0% | |
CATACTACGTACTCAATGAT+TGG | + | chr2_1:12698010-12698029 | Msa0195770:intron | 35.0% | |
! | TTAGAAAAGTGCGGGTATAA+CGG | - | chr2_1:12698053-12698072 | None:intergenic | 35.0% |
CATCTCCTAATTATGTCACA+AGG | + | chr2_1:12698120-12698139 | Msa0195770:CDS | 35.0% | |
AGTCATGATGACATTGTTGA+CGG | + | chr2_1:12698338-12698357 | Msa0195770:CDS | 35.0% | |
TAGTGTATACTGCAGAAAAC+AGG | - | chr2_1:12698401-12698420 | None:intergenic | 35.0% | |
! | ATCAGCTTTCCACATTTTCA+AGG | + | chr2_1:12698544-12698563 | Msa0195770:CDS | 35.0% |
! | ATACAATGAGCTCATCCTTT+TGG | + | chr2_1:12698588-12698607 | Msa0195770:intron | 35.0% |
CGCAGTTACATTTGATTAAC+GGG | - | chr2_1:12698646-12698665 | None:intergenic | 35.0% | |
! | TAGGATTAGCAACGAAAATC+TGG | - | chr2_1:12698946-12698965 | None:intergenic | 35.0% |
! | TAATTCTAGGGAAGAACAAG+GGG | + | chr2_1:12698987-12699006 | Msa0195770:CDS | 35.0% |
AGAAGATGAGCAATTTGAAG+AGG | + | chr2_1:12699187-12699206 | Msa0195770:CDS | 35.0% | |
TTGATGCAAGGATTTCATGT+TGG | + | chr2_1:12699324-12699343 | Msa0195770:three_prime_UTR | 35.0% | |
! | AAGGTCCATGAGTTTTTATG+TGG | + | chr2_1:12699372-12699391 | Msa0195770:three_prime_UTR | 35.0% |
CTTGTCCACATAAAAACTCA+TGG | - | chr2_1:12699380-12699399 | None:intergenic | 35.0% | |
ATTCGCTAAGATCTTGATAC+TGG | + | chr2_1:12699563-12699582 | Msa0195770:three_prime_UTR | 35.0% | |
ACATAGCAATACCATCGAAG+TGG | - | chr2_1:12693794-12693813 | None:intergenic | 40.0% | |
ACTTCGATGGTATTGCTATG+TGG | + | chr2_1:12693793-12693812 | Msa0195770:five_prime_UTR | 40.0% | |
CATGTCGTTCTCGTTCTTTA+AGG | + | chr2_1:12693974-12693993 | Msa0195770:exon | 40.0% | |
!! | TCTCGTTCTTTAAGGTTTCG+AGG | + | chr2_1:12693982-12694001 | Msa0195770:CDS | 40.0% |
ATAGACTTGACAACTTCCTG+CGG | - | chr2_1:12694017-12694036 | None:intergenic | 40.0% | |
! | AGATGTGCCATTACTGAAGA+CGG | - | chr2_1:12694638-12694657 | None:intergenic | 40.0% |
TTCAGTAATGGCACATCTGA+TGG | + | chr2_1:12694640-12694659 | Msa0195770:intron | 40.0% | |
TAAAAAAGCTCGACTAGCGA+CGG | + | chr2_1:12694775-12694794 | Msa0195770:intron | 40.0% | |
AAGTGCCATGTTTCATCCAA+GGG | - | chr2_1:12694816-12694835 | None:intergenic | 40.0% | |
! | AAAGTGCCATGTTTCATCCA+AGG | - | chr2_1:12694817-12694836 | None:intergenic | 40.0% |
CATGACTTATATACCCACGA+CGG | - | chr2_1:12694896-12694915 | None:intergenic | 40.0% | |
GATAACACTCAGGGCATATA+TGG | - | chr2_1:12694919-12694938 | None:intergenic | 40.0% | |
! | AGAACTATGCTTTCTGGAGA+TGG | + | chr2_1:12695080-12695099 | Msa0195770:CDS | 40.0% |
ACAAGTTGCCTATACTTGGA+TGG | + | chr2_1:12695183-12695202 | Msa0195770:CDS | 40.0% | |
CAAGTTGCCTATACTTGGAT+GGG | + | chr2_1:12695184-12695203 | Msa0195770:CDS | 40.0% | |
CTTACTTCCCATCCAAGTAT+AGG | - | chr2_1:12695194-12695213 | None:intergenic | 40.0% | |
! | ATGCATGCAGTTGACTTAAC+TGG | + | chr2_1:12695237-12695256 | Msa0195770:intron | 40.0% |
!! | GGGTGCATGAATTTTGATAC+AGG | + | chr2_1:12695271-12695290 | Msa0195770:intron | 40.0% |
GAAAGGATTTAGTCCACTGT+TGG | + | chr2_1:12695297-12695316 | Msa0195770:CDS | 40.0% | |
TCAACAATATCGTCCAACAG+TGG | - | chr2_1:12695313-12695332 | None:intergenic | 40.0% | |
! | AAAGGTGATGGCAACAGAAA+AGG | - | chr2_1:12695437-12695456 | None:intergenic | 40.0% |
ACTGATGCTCTATGCCAAAT+TGG | + | chr2_1:12695523-12695542 | Msa0195770:intron | 40.0% | |
CAGACTTCTTATCAGGAACA+AGG | - | chr2_1:12695589-12695608 | None:intergenic | 40.0% | |
! | GCAGTTCCAACTTTTTATGG+CGG | + | chr2_1:12695793-12695812 | Msa0195770:intron | 40.0% |
! | TTTTGGACGAAAGGGGATTT+TGG | + | chr2_1:12696093-12696112 | Msa0195770:intron | 40.0% |
AAAACAGGGAGAGAGCAATT+AGG | - | chr2_1:12696636-12696655 | None:intergenic | 40.0% | |
ATATACTGTGGTTGAGCTTG+AGG | + | chr2_1:12696745-12696764 | Msa0195770:intron | 40.0% | |
GGGTGTTCTCAGATACATAT+TGG | + | chr2_1:12696917-12696936 | Msa0195770:intron | 40.0% | |
TCAGATGCTACATCGAAGTT+AGG | - | chr2_1:12696984-12697003 | None:intergenic | 40.0% | |
TTTGACAACTCACTACGATG+AGG | + | chr2_1:12697167-12697186 | Msa0195770:CDS | 40.0% | |
! | AATGGTGTTAAAGTGGCCAA+TGG | - | chr2_1:12697554-12697573 | None:intergenic | 40.0% |
! | ATGGAGGAATGGTGTTAAAG+TGG | - | chr2_1:12697561-12697580 | None:intergenic | 40.0% |
TTTGTTAGCGGAAATCATGG+AGG | - | chr2_1:12697577-12697596 | None:intergenic | 40.0% | |
GCACCATTACAATTGCAAGT+TGG | - | chr2_1:12697666-12697685 | None:intergenic | 40.0% | |
TCTCAGAAAGAACGACTACT+CGG | - | chr2_1:12697942-12697961 | None:intergenic | 40.0% | |
CTCATCTTTGAACATGTGCA+CGG | + | chr2_1:12697985-12698004 | Msa0195770:intron | 40.0% | |
TACGTACTCAATGATTGGAG+TGG | + | chr2_1:12698015-12698034 | Msa0195770:intron | 40.0% | |
CTCCTAATTATGTCACAAGG+AGG | + | chr2_1:12698123-12698142 | Msa0195770:CDS | 40.0% | |
TGCCTCCTTGTGACATAATT+AGG | - | chr2_1:12698128-12698147 | None:intergenic | 40.0% | |
CAGTCTATAAAGGTCTGTTC+TGG | + | chr2_1:12698146-12698165 | Msa0195770:intron | 40.0% | |
CGCTTCATTATCTGAGCATT+GGG | - | chr2_1:12698291-12698310 | None:intergenic | 40.0% | |
ACGCTTCATTATCTGAGCAT+TGG | - | chr2_1:12698292-12698311 | None:intergenic | 40.0% | |
ACACAACACTAGCAGAAACA+AGG | - | chr2_1:12698435-12698454 | None:intergenic | 40.0% | |
TCTGCTAGTGTTGTGTAACT+TGG | + | chr2_1:12698439-12698458 | Msa0195770:intron | 40.0% | |
TTTACATCTCGCGGCTTATT+AGG | - | chr2_1:12698965-12698984 | None:intergenic | 40.0% | |
CATAATCTATCTCCGGGAAA+AGG | + | chr2_1:12699028-12699047 | Msa0195770:CDS | 40.0% | |
! | AAAGCACAGTAACCTTTTCC+CGG | - | chr2_1:12699043-12699062 | None:intergenic | 40.0% |
TCTGTGAGCAAGTAATGTGT+TGG | + | chr2_1:12699349-12699368 | Msa0195770:three_prime_UTR | 40.0% | |
TGAGCAAGTAATGTGTTGGA+AGG | + | chr2_1:12699353-12699372 | Msa0195770:three_prime_UTR | 40.0% | |
TTAGCTTCTCCTAATGGTGT+TGG | + | chr2_1:12699613-12699632 | Msa0195770:three_prime_UTR | 40.0% | |
TAGCTTCTCCTAATGGTGTT+GGG | + | chr2_1:12699614-12699633 | Msa0195770:three_prime_UTR | 40.0% | |
AATCTCAACCCAACACCATT+AGG | - | chr2_1:12699625-12699644 | None:intergenic | 40.0% | |
CCATCGAAGTGGAAGAAAGA+AGG | - | chr2_1:12693783-12693802 | None:intergenic | 45.0% | |
CCTTCTTTCTTCCACTTCGA+TGG | + | chr2_1:12693780-12693799 | Msa0195770:five_prime_UTR | 45.0% | |
AGATCAGGTTTCACAGCTTG+TGG | + | chr2_1:12695121-12695140 | Msa0195770:CDS | 45.0% | |
ACTTAACTGGTTGCTCATCG+TGG | + | chr2_1:12695250-12695269 | Msa0195770:intron | 45.0% | |
CTTAACTGGTTGCTCATCGT+GGG | + | chr2_1:12695251-12695270 | Msa0195770:intron | 45.0% | |
AGGAGCAACAGAAAAGGTGA+TGG | - | chr2_1:12695449-12695468 | None:intergenic | 45.0% | |
AAAGAAATTGCCCTGAGCTC+TGG | + | chr2_1:12696532-12696551 | Msa0195770:CDS | 45.0% | |
CAACATTATGCCAGAGCTCA+GGG | - | chr2_1:12696545-12696564 | None:intergenic | 45.0% | |
! | TGAGCTCTGGCATAATGTTG+CGG | + | chr2_1:12696545-12696564 | Msa0195770:CDS | 45.0% |
TAGCGGAAATCATGGAGGAA+TGG | - | chr2_1:12697572-12697591 | None:intergenic | 45.0% | |
AGCGTGAATGCACTCACAAT+TGG | - | chr2_1:12697713-12697732 | None:intergenic | 45.0% | |
CACAAGGAGGCAGTCTATAA+AGG | + | chr2_1:12698136-12698155 | Msa0195770:CDS | 45.0% | |
! | GCTTCTCTCGGATTTTCTCT+TGG | + | chr2_1:12698260-12698279 | Msa0195770:intron | 45.0% |
!! | TAAATAAATAAATAAAAACA+GGG | - | chr2_1:12696650-12696669 | None:intergenic | 5.0% |
!! | ATAAATAAATAAATAAAAAC+AGG | - | chr2_1:12696651-12696670 | None:intergenic | 5.0% |
!!! | TTTAGTTATTTTTTTTATTA+AGG | - | chr2_1:12697688-12697707 | None:intergenic | 5.0% |
! | ACAACTTCCTGCGGCGTTTT+AGG | - | chr2_1:12694008-12694027 | None:intergenic | 50.0% |
GTTTGGGCCGTCTTCAGTAA+TGG | + | chr2_1:12694628-12694647 | Msa0195770:intron | 50.0% | |
!! | AGCGACGGATACGTTTTAGC+CGG | + | chr2_1:12694790-12694809 | Msa0195770:intron | 50.0% |
GTCATCAGTTTGTCCGTCGT+GGG | + | chr2_1:12694880-12694899 | Msa0195770:intron | 50.0% | |
TCAGGTTTCACAGCTTGTGG+AGG | + | chr2_1:12695124-12695143 | Msa0195770:CDS | 50.0% | |
GCTTGTGGAGGAAATCTGCA+AGG | + | chr2_1:12695136-12695155 | Msa0195770:CDS | 50.0% | |
TGTGGAGGAAATCTGCAAGG+AGG | + | chr2_1:12695139-12695158 | Msa0195770:CDS | 50.0% | |
GCAACATTATGCCAGAGCTC+AGG | - | chr2_1:12696546-12696565 | None:intergenic | 50.0% | |
! | GAGCTCTGGCATAATGTTGC+GGG | + | chr2_1:12696546-12696565 | Msa0195770:CDS | 50.0% |
AAACAGGCCCTTGATCTCCT+TGG | - | chr2_1:12697292-12697311 | None:intergenic | 50.0% | |
CGGATAGAAACTCCCAACAG+TGG | - | chr2_1:12697368-12697387 | None:intergenic | 50.0% | |
TATTGCGAGAGATAGCTCCG+CGG | + | chr2_1:12697510-12697529 | Msa0195770:intron | 50.0% | |
!! | GATACGTTTTAGCCGGCCCT+TGG | + | chr2_1:12694797-12694816 | Msa0195770:intron | 55.0% |
GCCATGTTTCATCCAAGGGC+CGG | - | chr2_1:12694812-12694831 | None:intergenic | 55.0% | |
CGTCATCAGTTTGTCCGTCG+TGG | + | chr2_1:12694879-12694898 | Msa0195770:intron | 55.0% | |
GGAATGTCACACGATGACGC+AGG | - | chr2_1:12698380-12698399 | None:intergenic | 55.0% | |
TTCGAGGCCTAAAACGCCGC+AGG | + | chr2_1:12693998-12694017 | Msa0195770:CDS | 60.0% | |
GCCGGCCCTTGGATGAAACA+TGG | + | chr2_1:12694808-12694827 | Msa0195770:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 12693711 | 12699663 | 12693711 | ID=Msa0195770;Name=Msa0195770 |
chr2_1 | mRNA | 12693711 | 12699663 | 12693711 | ID=Msa0195770-mRNA-1;Parent=Msa0195770;Name=Msa0195770-mRNA-1;_AED=0.15;_eAED=0.15;_QI=264|1|1|1|1|1|11|410|339 |
chr2_1 | exon | 12693711 | 12694097 | 12693711 | ID=Msa0195770-mRNA-1:exon:5527;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12695044 | 12695208 | 12695044 | ID=Msa0195770-mRNA-1:exon:5528;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12695293 | 12695411 | 12695293 | ID=Msa0195770-mRNA-1:exon:5529;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12696522 | 12696596 | 12696522 | ID=Msa0195770-mRNA-1:exon:5530;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12696929 | 12697022 | 12696929 | ID=Msa0195770-mRNA-1:exon:5531;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12697129 | 12697188 | 12697129 | ID=Msa0195770-mRNA-1:exon:5532;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12698092 | 12698157 | 12698092 | ID=Msa0195770-mRNA-1:exon:5533;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12698261 | 12698359 | 12698261 | ID=Msa0195770-mRNA-1:exon:5534;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12698521 | 12698565 | 12698521 | ID=Msa0195770-mRNA-1:exon:5535;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12698947 | 12699049 | 12698947 | ID=Msa0195770-mRNA-1:exon:5536;Parent=Msa0195770-mRNA-1 |
chr2_1 | exon | 12699183 | 12699663 | 12699183 | ID=Msa0195770-mRNA-1:exon:5537;Parent=Msa0195770-mRNA-1 |
chr2_1 | five_prime_UTR | 12693711 | 12693974 | 12693711 | ID=Msa0195770-mRNA-1:five_prime_utr;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12693975 | 12694097 | 12693975 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12695044 | 12695208 | 12695044 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12695293 | 12695411 | 12695293 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12696522 | 12696596 | 12696522 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12696929 | 12697022 | 12696929 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12697129 | 12697188 | 12697129 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12698092 | 12698157 | 12698092 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12698261 | 12698359 | 12698261 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12698521 | 12698565 | 12698521 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12698947 | 12699049 | 12698947 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | CDS | 12699183 | 12699253 | 12699183 | ID=Msa0195770-mRNA-1:cds;Parent=Msa0195770-mRNA-1 |
chr2_1 | three_prime_UTR | 12699254 | 12699663 | 12699254 | ID=Msa0195770-mRNA-1:three_prime_utr;Parent=Msa0195770-mRNA-1 |
Gene Sequence |
Protein sequence |