AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1157750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1157750 MtrunA17_Chr7g0252151 95.853 1037 21 2 1 1036 46 1061 0.0 2053
Msa1157750 MtrunA17_Chr3g0131651 70.513 1014 269 5 20 1026 24 1014 0.0 1490
Msa1157750 MtrunA17_Chr7g0252171 67.641 1026 305 4 6 1027 6 1008 0.0 1442
Msa1157750 MtrunA17_Chr8g0371581 59.263 1031 385 9 6 1026 13 1018 0.0 1254
Msa1157750 MtrunA17_Chr6g0451931 27.951 898 476 26 36 840 138 957 6.26e-77 275
Msa1157750 MtrunA17_Chr3g0081881 79.592 49 10 0 48 96 11 59 1.10e-20 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1157750 AT5G13980.1 69.461 1038 277 10 1 1027 3 1011 0.0 1498
Msa1157750 AT5G13980.2 69.461 1038 277 10 1 1027 3 1011 0.0 1498
Msa1157750 AT3G26720.1 64.757 1030 334 7 1 1027 1 1004 0.0 1402
Msa1157750 AT5G13980.3 70.042 948 247 9 1 940 3 921 0.0 1386
Msa1157750 AT3G26720.5 64.308 975 320 6 1 972 1 950 0.0 1324
Msa1157750 AT3G26720.2 64.803 966 312 6 1 963 1 941 0.0 1321
Msa1157750 AT3G26720.4 64.936 944 303 6 1 941 1 919 0.0 1296
Msa1157750 AT3G26720.3 64.936 944 303 6 1 941 1 919 0.0 1295
Msa1157750 AT5G66150.2 57.268 1025 394 7 23 1026 33 1034 0.0 1209
Msa1157750 AT5G66150.1 57.310 1026 393 8 23 1026 33 1035 0.0 1207
Msa1157750 AT5G66150.3 56.258 743 301 7 306 1026 1 741 0.0 852
Msa1157750 AT5G14950.1 26.464 888 505 25 36 840 152 974 7.71e-67 245

Find 229 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTATGTCAAGGCATATT+TGG 0.161062 7_4:+46806134 Msa1157750:CDS
CTGAATTACCTTTACTATTC+AGG 0.167164 7_4:+46806678 Msa1157750:CDS
GCAAAATATCCAAGAATTAA+AGG 0.186569 7_4:-46811178 None:intergenic
ATTTCATAAGCTTGTTTAAA+AGG 0.188800 7_4:-46811104 None:intergenic
AACATTTATGGAAGCTGTTT+TGG 0.203392 7_4:-46811224 None:intergenic
AGTCTGAAGCCTTTAATTCT+TGG 0.215604 7_4:+46811169 Msa1157750:three_prime_UTR
GTTTCTTGCATTAACATAAT+TGG 0.217083 7_4:-46806462 None:intergenic
ATTAATGAGTGGCTATTATT+TGG 0.217723 7_4:+46804659 Msa1157750:CDS
AGCTCCACAGTTAACTCTTT+TGG 0.222849 7_4:-46810981 None:intergenic
CAGATCGTGCAAATGGTTTC+TGG 0.225600 7_4:+46804592 Msa1157750:CDS
ACTTGTTGAAACTTTGTAAC+TGG 0.229637 7_4:-46805092 None:intergenic
TGCTGTGCAGGCTTATTTAT+TGG 0.230637 7_4:+46803030 Msa1157750:CDS
CACTCGGATTTCAACTACTA+TGG 0.233395 7_4:+46807422 Msa1157750:CDS
ACCTAAGAATGGAACTTATT+AGG 0.240344 7_4:+46811292 Msa1157750:three_prime_UTR
TTCTATGGTTCATGCTCTAT+TGG 0.267475 7_4:+46802165 Msa1157750:CDS
GTTACTACTGTCAAAGTAAA+TGG 0.272153 7_4:-46811030 None:intergenic
GCTGTGCAGGCTTATTTATT+GGG 0.280320 7_4:+46803031 Msa1157750:CDS
GTTGAATCAACATCGGTTAC+TGG 0.283082 7_4:+46805059 Msa1157750:CDS
CATTGTTATTATAACATTAC+AGG 0.284184 7_4:+46809389 Msa1157750:CDS
ACCTAATAAGTTCCATTCTT+AGG 0.289617 7_4:-46811293 None:intergenic
TGGTTCCAACAATTCTATTC+AGG 0.292291 7_4:+46802030 Msa1157750:CDS
TCGTAGTCTACCTTCTTTCC+TGG 0.303055 7_4:-46809915 None:intergenic
TCAGCTAATGAGTCTGTATT+TGG 0.303542 7_4:-46804817 None:intergenic
GTTAAGCAGCTTGTTAGTTC+TGG 0.309694 7_4:+46802712 Msa1157750:CDS
TCAATTTGCCAACCAATTCT+TGG 0.320808 7_4:-46802992 None:intergenic
GCAAAATGTGTTGGATTCTA+TGG 0.320839 7_4:+46802150 Msa1157750:CDS
GTGTTCTTCCAGATCTTTGC+TGG 0.324479 7_4:+46803390 Msa1157750:intron
CTCTGTGCAGGCAGAGAAAC+TGG 0.325387 7_4:+46805013 Msa1157750:intron
TAAGACAGAATTCTCAGTTT+TGG 0.326220 7_4:+46808066 Msa1157750:CDS
ACCAGTTCAACTTCTGTTGC+AGG 0.327123 7_4:-46805341 None:intergenic
AGACTTGTTTGGAAAGTAGA+AGG 0.327254 7_4:+46810915 Msa1157750:CDS
GCTAAATGGCGCCGTACTTT+TGG 0.328700 7_4:+46809155 Msa1157750:CDS
GAAGTGCACCAGCCCGTTGC+TGG 0.334798 7_4:+46807745 Msa1157750:CDS
CTTATAAGATGTGTTCCATT+TGG 0.349662 7_4:-46806850 None:intergenic
ACATCACAGGGCATAGTCTC+TGG 0.353245 7_4:+46801932 Msa1157750:CDS
TGGAGAAGAAAAGACTTGTT+TGG 0.356314 7_4:+46810904 Msa1157750:CDS
TATTATGTCAAGGCATATTT+GGG 0.360581 7_4:+46806135 Msa1157750:CDS
GAGAACTATGAACCTCCTTC+TGG 0.360730 7_4:+46803423 Msa1157750:CDS
TCAGTTTCTGTACCACCATT+TGG 0.361418 7_4:+46806198 Msa1157750:CDS
AGATAGGAATAAACGCAAAA+AGG 0.361623 7_4:+46803182 Msa1157750:CDS
AGAAGAGTCTTGAGGTTATC+TGG 0.364575 7_4:+46803205 Msa1157750:CDS
TTACCAACTCCATCTTCAAT+AGG 0.369060 7_4:-46807390 None:intergenic
CGAACTCCTCTTTCAGAAAT+CGG 0.375393 7_4:-46802961 None:intergenic
TTGTCCTTTCAGATTAATCT+TGG 0.387749 7_4:+46808025 Msa1157750:intron
TTCGATTTGACTCCAAGAAT+TGG 0.390690 7_4:+46802980 Msa1157750:CDS
TGAAAATGCAAGCCAATACT+TGG 0.393326 7_4:-46806178 None:intergenic
ACTGGTTCAAGGAAAGAGTT+TGG 0.394703 7_4:+46805358 Msa1157750:CDS
AATCAATCCATGGATATATC+AGG 0.397775 7_4:+46807018 Msa1157750:CDS
AATGACCTGAATAGAATTGT+TGG 0.398399 7_4:-46802035 None:intergenic
ATTGTGGTTTATAACTCTCT+TGG 0.398651 7_4:+46805493 Msa1157750:CDS
CTTTGGGTGAGGGAGCTAAA+TGG 0.399736 7_4:+46809141 Msa1157750:CDS
TTCGTCATCACTGGCTTGCT+TGG 0.400499 7_4:+46805037 Msa1157750:CDS
CTCTATTGGCTGATAAGAAC+AGG 0.401356 7_4:+46802179 Msa1157750:CDS
TTCTATAATAATATTTCCCT+TGG 0.402828 7_4:-46809112 None:intergenic
TGAATTACCTTTACTATTCA+GGG 0.412178 7_4:+46806679 Msa1157750:CDS
CCTCCGGTTTACGTGGGAAA+AGG 0.413149 7_4:+46811257 Msa1157750:three_prime_UTR
GTAGGATCGATTACCAAGAT+AGG 0.415011 7_4:+46803166 Msa1157750:CDS
CTTCAAATTTCCTTGACCTA+TGG 0.416316 7_4:-46806408 None:intergenic
AAAGTGGAGAATATATTTCC+TGG 0.425358 7_4:-46809178 None:intergenic
CTTTACTATTCAGGGTATAA+CGG 0.429029 7_4:+46806687 Msa1157750:CDS
GTTTGGACATTCTGCTGTGC+AGG 0.429270 7_4:+46803018 Msa1157750:CDS
GGTTGGCAAATTGACCCGTT+TGG 0.434705 7_4:+46803001 Msa1157750:CDS
GAAGGAGGTTCATAGTTCTC+AGG 0.436622 7_4:-46803420 None:intergenic
CTGGAAATGGAGGTGTTTCA+AGG 0.438959 7_4:+46810943 Msa1157750:CDS
TTATTATAGAATAGACCCTT+TGG 0.439735 7_4:+46809124 Msa1157750:CDS
TGGGAAGCTCAATGTTCATC+TGG 0.439829 7_4:+46801952 Msa1157750:CDS
AATCACATTATGTGGACAAT+GGG 0.443770 7_4:+46804171 Msa1157750:CDS
GTAGAAGGGTCCTCTGGAAA+TGG 0.445460 7_4:+46810930 Msa1157750:CDS
TCCTGCAACAGAAGTTGAAC+TGG 0.448308 7_4:+46805340 Msa1157750:CDS
GGGTAATAATTTCCAGCAAC+GGG 0.449669 7_4:-46807757 None:intergenic
TTTACGTGGGAAAAGGGCTA+TGG 0.451843 7_4:+46811264 Msa1157750:three_prime_UTR
TATGCTAAACGATTGGCAAT+AGG 0.452324 7_4:+46804907 Msa1157750:CDS
ACTCCATCTTCAATAGGTAT+AGG 0.454189 7_4:-46807384 None:intergenic
TATTATAGAATAGACCCTTT+GGG 0.458271 7_4:+46809125 Msa1157750:CDS
AAACATTTGCAGGTTATTGA+TGG 0.459153 7_4:+46806027 Msa1157750:intron
GCTTATATCTTCCGTCCAAA+TGG 0.464533 7_4:+46806835 Msa1157750:CDS
CATAAAAGAGAATTCCCAAA+AGG 0.468108 7_4:-46801880 None:intergenic
TAATTTCTGTAACAGAATGC+TGG 0.468169 7_4:+46806811 Msa1157750:intron
TTTCCATATTCAGGTTATTG+TGG 0.471363 7_4:+46805477 Msa1157750:intron
GAATAAGTGAGTAAAATTTG+AGG 0.473856 7_4:+46811322 Msa1157750:three_prime_UTR
TGTCCTTTCAGATTAATCTT+GGG 0.474577 7_4:+46808026 Msa1157750:intron
ATAACTCTCTTGGTTGGAAG+AGG 0.474966 7_4:+46805503 Msa1157750:CDS
AGTTATTCAGATCGTGCAAA+TGG 0.477887 7_4:+46804585 Msa1157750:intron
CATCCAAGACACCCAAGTAT+TGG 0.478995 7_4:+46806166 Msa1157750:CDS
GAAACTGGTTTCGTCATCAC+TGG 0.479807 7_4:+46805028 Msa1157750:CDS
ATAAGCTTGTTTAAAAGGCA+AGG 0.480608 7_4:-46811099 None:intergenic
CTTGTTGAAACTTTGTAACT+GGG 0.480817 7_4:-46805091 None:intergenic
TCCTTTCAGGAACTTGATCA+AGG 0.483430 7_4:+46809639 Msa1157750:intron
AGAATCTCAAATTCTACCTC+TGG 0.484241 7_4:+46806086 Msa1157750:CDS
CGTGCAAATGGTTTCTGGAC+AGG 0.485426 7_4:+46804597 Msa1157750:CDS
GAGCCTCGGTTCATCTGCTC+AGG 0.488230 7_4:+46803239 Msa1157750:CDS
AAGAAATCGTCAGTCTTGAT+TGG 0.489756 7_4:-46804461 None:intergenic
CGTAGTCTACCTTCTTTCCT+GGG 0.490814 7_4:-46809914 None:intergenic
ACAGAAGTTGAACTGGTTCA+AGG 0.495501 7_4:+46805347 Msa1157750:CDS
TATCAATTGAGATATGTTCA+TGG 0.496829 7_4:+46811378 Msa1157750:three_prime_UTR
CTGACATAGCGTTTCAAAGC+TGG 0.497109 7_4:-46804636 None:intergenic
GCGTTTCAAAGCTGGTCTAC+TGG 0.497765 7_4:-46804628 None:intergenic
GTAAAAGTGCGGATTTCCAT+TGG 0.501131 7_4:-46811008 None:intergenic
GATTTGCCCATCTTCTAAGC+TGG 0.501303 7_4:-46808110 None:intergenic
TTTAGAGGGCGAAAGAACTC+AGG 0.501312 7_4:+46804793 Msa1157750:CDS
TACCAGACAGTACAAAGAAA+AGG 0.505652 7_4:+46807150 Msa1157750:CDS
AATAATTTCCAGCAACGGGC+TGG 0.505914 7_4:-46807753 None:intergenic
AGAATAGACCCTTTGGGTGA+GGG 0.506802 7_4:+46809131 Msa1157750:CDS
AACTGTGGAGCTTGCTCCAA+TGG 0.506887 7_4:+46810992 Msa1157750:CDS
CTCCGGTTTACGTGGGAAAA+GGG 0.506978 7_4:+46811258 Msa1157750:three_prime_UTR
ATCCTGAAAATGTTGTTACA+TGG 0.508095 7_4:-46809338 None:intergenic
CTACAGAACAGACTGGGACT+TGG 0.508692 7_4:+46807723 Msa1157750:CDS
CTGTGCCGGTGACTGCATCA+TGG 0.509159 7_4:-46804861 None:intergenic
TAGAATAGACCCTTTGGGTG+AGG 0.510130 7_4:+46809130 Msa1157750:CDS
AAGTGTATAAACTGATGATC+TGG 0.510611 7_4:-46806366 None:intergenic
CAATACTTGGGTGTCTTGGA+TGG 0.512823 7_4:-46806165 None:intergenic
TAAAACCACTTGTTGAATGA+AGG 0.514497 7_4:+46811076 Msa1157750:three_prime_UTR
GAACAGGAAATTTATCTATG+TGG 0.515196 7_4:+46802195 Msa1157750:CDS
CTCGGACAAATCACATTATG+TGG 0.518821 7_4:+46804163 Msa1157750:CDS
TGCACAGCAGAATGTCCAAA+CGG 0.521779 7_4:-46803016 None:intergenic
TGTGTTATACTCTATAAACT+TGG 0.522749 7_4:-46801912 None:intergenic
AATCTTTGTGTGAATTTATG+TGG 0.523347 7_4:-46801751 None:intergenic
TGATGCACTTCATCTAGTAT+TGG 0.525893 7_4:-46806992 None:intergenic
TCGGAAAAGGCTAACAAAAG+TGG 0.525918 7_4:-46809194 None:intergenic
AACTCTTCACACTCCAGAAG+CGG 0.528737 7_4:-46801800 None:intergenic
CAAGGCCTTCATTCAACAAG+TGG 0.531195 7_4:-46811081 None:intergenic
CGTTATACCCTGAATAGTAA+AGG 0.531274 7_4:-46806686 None:intergenic
CTATGGGTTCCACCTAAGAA+TGG 0.532873 7_4:+46811281 Msa1157750:three_prime_UTR
AAGCCAATACTTGGGTGTCT+TGG 0.535952 7_4:-46806169 None:intergenic
TGGTTTATAACTCTCTTGGT+TGG 0.536231 7_4:+46805497 Msa1157750:CDS
TATATACAATACGACATGTA+AGG 0.538390 7_4:-46811357 None:intergenic
ATAAAAGAGAATTCCCAAAA+GGG 0.539238 7_4:-46801879 None:intergenic
TCTTATAAGTCATGAAAGAC+AGG 0.539510 7_4:+46806864 Msa1157750:CDS
TATAGAGTATAACACATCAC+AGG 0.540374 7_4:+46801919 Msa1157750:CDS
ATATTTCCTGGCCAAAAGTA+CGG 0.540811 7_4:-46809166 None:intergenic
CGTATAAATGCGCTAATCGA+AGG 0.540840 7_4:-46809671 None:intergenic
ATCAATTGAGATATGTTCAT+GGG 0.541493 7_4:+46811379 Msa1157750:three_prime_UTR
GGCTTGTGTGCAAAATGTGT+TGG 0.541656 7_4:+46802141 Msa1157750:CDS
TGGAAAGTAGAAGGGTCCTC+TGG 0.542542 7_4:+46810924 Msa1157750:CDS
AAATCACATTATGTGGACAA+TGG 0.545205 7_4:+46804170 Msa1157750:CDS
TGGAAATGGAGGTGTTTCAA+GGG 0.545678 7_4:+46810944 Msa1157750:CDS
TCCTGAAAATGTTGTTACAT+GGG 0.545787 7_4:-46809337 None:intergenic
TAATGATTATGCTAAACGAT+TGG 0.546213 7_4:+46804900 Msa1157750:CDS
ACTGTTGATCAGTACTATGT+TGG 0.549819 7_4:+46802010 Msa1157750:CDS
ATTTGACTCCAAGAATTGGT+TGG 0.549978 7_4:+46802984 Msa1157750:CDS
GCTTATCTGCAAATCAAGAA+AGG 0.550208 7_4:+46810874 Msa1157750:CDS
GCACAGCAGAATGTCCAAAC+GGG 0.551546 7_4:-46803015 None:intergenic
TGGACACCGATTTCTGAAAG+AGG 0.552492 7_4:+46802955 Msa1157750:CDS
AAATCGAGTTGATGCTCCAC+AGG 0.552903 7_4:+46808128 Msa1157750:CDS
ATTTAGCTCCCTCACCCAAA+GGG 0.553112 7_4:-46809139 None:intergenic
GGAGGATCCAGCTTAGAAGA+TGG 0.554711 7_4:+46808103 Msa1157750:CDS
TGGGTAATAATTTCCAGCAA+CGG 0.556408 7_4:-46807758 None:intergenic
TAAGATGTGTTCCATTTGGA+CGG 0.558123 7_4:-46806846 None:intergenic
TCAAATTCTACCTCTGGCTG+AGG 0.558671 7_4:+46806092 Msa1157750:CDS
GTGTAAGTGCTAAAACCAAA+TGG 0.559441 7_4:-46806213 None:intergenic
GTTCCAGTGACTGTTCTCCA+TGG 0.560750 7_4:+46806968 Msa1157750:CDS
CAAAACACCTGATATATCCA+TGG 0.563546 7_4:-46807025 None:intergenic
GGTCCTATACCTATTGAAGA+TGG 0.564137 7_4:+46807381 Msa1157750:CDS
TACAATACGACATGTAAGGT+TGG 0.565319 7_4:-46811353 None:intergenic
GCTCATACTCATGATGATGT+TGG 0.565983 7_4:+46801977 Msa1157750:CDS
TTACGTGGGAAAAGGGCTAT+GGG 0.568630 7_4:+46811265 Msa1157750:three_prime_UTR
GGTCCATGGAGAACAGTCAC+TGG 0.569176 7_4:-46806971 None:intergenic
ATGATTGATCAGACTACACT+TGG 0.569418 7_4:+46802935 Msa1157750:CDS
AGTATCAATACGCACATACA+TGG 0.569841 7_4:+46804205 Msa1157750:CDS
AAGGAGGTTCATAGTTCTCA+GGG 0.570158 7_4:-46803419 None:intergenic
CATTTAGCTCCCTCACCCAA+AGG 0.572359 7_4:-46809140 None:intergenic
ATACCTATTGAAGATGGAGT+TGG 0.572453 7_4:+46807387 Msa1157750:CDS
GAGGATCCAGCTTAGAAGAT+GGG 0.572606 7_4:+46808104 Msa1157750:CDS
AGTCTTGAGGTTATCTGGCA+AGG 0.579058 7_4:+46803210 Msa1157750:CDS
ACGATTGGCAATAGGCTACA+AGG 0.579394 7_4:+46804915 Msa1157750:CDS
AGTCATGAAAAGTCTTCCAT+AGG 0.579693 7_4:+46806392 Msa1157750:CDS
GAAAAGTCTTCCATAGGTCA+AGG 0.583359 7_4:+46806398 Msa1157750:CDS
GACTTGTTTGGAAAGTAGAA+GGG 0.584116 7_4:+46810916 Msa1157750:CDS
CATCACAGGGCATAGTCTCT+GGG 0.586863 7_4:+46801933 Msa1157750:CDS
TGCATCAACGAATCAATCCA+TGG 0.588424 7_4:+46807008 Msa1157750:CDS
CAACACCATGATGCAGTCAC+CGG 0.591654 7_4:+46804856 Msa1157750:CDS
TTTGCATCTGTATATATGGA+GGG 0.592290 7_4:-46804416 None:intergenic
CTTCATCTAGTATTGGTCCA+TGG 0.596258 7_4:-46806985 None:intergenic
TACGTGACTACAGAACAGAC+TGG 0.596442 7_4:+46807716 Msa1157750:CDS
GGTAGGATGATAAAGATGAC+TGG 0.599141 7_4:+46809307 Msa1157750:intron
CCTTTCAGGAACTTGATCAA+GGG 0.599608 7_4:+46809640 Msa1157750:intron
ATATACATTGCACACTGCAT+AGG 0.599945 7_4:+46803844 Msa1157750:CDS
TAATAAGTTCCATTCTTAGG+TGG 0.600615 7_4:-46811290 None:intergenic
GGTATTAGATCAAAGAAGTG+AGG 0.605616 7_4:+46810844 Msa1157750:intron
GAAAGAAGAGTACTTCCACT+TGG 0.605700 7_4:-46801722 None:intergenic
TCAGGAACTTGATCAAGGGA+CGG 0.606166 7_4:+46809644 Msa1157750:intron
AAATCAAGAAAGGACAGAGA+TGG 0.607796 7_4:+46810884 Msa1157750:CDS
TCTAAGAAACTATTATGTCA+AGG 0.610906 7_4:+46806125 Msa1157750:CDS
ACATACATGGTACCGACAGT+TGG 0.612842 7_4:+46804218 Msa1157750:CDS
TTATGTTAATGCAAGAAACA+TGG 0.614150 7_4:+46806466 Msa1157750:CDS
TGTATAAACTGATGATCTGG+TGG 0.614284 7_4:-46806363 None:intergenic
AATATGCTGCAAATGAGTCA+TGG 0.618901 7_4:+46804438 Msa1157750:CDS
GTATTAGATCAAAGAAGTGA+GGG 0.621648 7_4:+46810845 Msa1157750:intron
TTGCTTGGTTGAATCAACAT+CGG 0.621818 7_4:+46805052 Msa1157750:CDS
GGAAATGGAGGTGTTTCAAG+GGG 0.622441 7_4:+46810945 Msa1157750:CDS
TTGCTGCTTGATGATTCTAG+AGG 0.624603 7_4:+46808524 Msa1157750:CDS
CTGCATAGGATTAACTCTGA+AGG 0.627156 7_4:+46803858 Msa1157750:CDS
CGCTATGTCAGATTAATGAG+TGG 0.627187 7_4:+46804648 Msa1157750:CDS
TGGCAAGGTAGCAAGAGCCT+CGG 0.630943 7_4:+46803225 Msa1157750:CDS
TCAAAGTAAAATCCAGAAGG+AGG 0.631190 7_4:-46803435 None:intergenic
TTAGAGGGCGAAAGAACTCA+GGG 0.634363 7_4:+46804794 Msa1157750:CDS
GAAAATGCAAGCCAATACTT+GGG 0.635413 7_4:-46806177 None:intergenic
GAAGGGTCCTCTGGAAATGG+AGG 0.635637 7_4:+46810933 Msa1157750:CDS
AGTGTGCAATGTATATCACT+AGG 0.638118 7_4:-46803837 None:intergenic
CACTGTGCATGATAACCAAG+TGG 0.640253 7_4:+46801707 Msa1157750:five_prime_UTR
CAAAGTAAATGGTAAAAGTG+CGG 0.640298 7_4:-46811019 None:intergenic
CTGTGTTGCTGACAATTGCA+AGG 0.641022 7_4:+46808574 Msa1157750:CDS
ATACTCATGATGATGTTGGA+TGG 0.641633 7_4:+46801981 Msa1157750:CDS
ACTTCAAAGTAAAATCCAGA+AGG 0.641851 7_4:-46803438 None:intergenic
TGCACAGATCGAAGAAGACA+AGG 0.643150 7_4:+46809851 Msa1157750:intron
TGAAACACCTCCATTTCCAG+AGG 0.645145 7_4:-46810940 None:intergenic
TTTAACCCTCCGGTTTACGT+GGG 0.647513 7_4:+46811251 Msa1157750:three_prime_UTR
AATGGAGGTGTTTCAAGGGG+AGG 0.649350 7_4:+46810948 Msa1157750:CDS
GAATGAGCTTGTCCAACTGT+CGG 0.650516 7_4:-46804230 None:intergenic
GCTCATTCATTACGTGAACA+AGG 0.651468 7_4:+46804245 Msa1157750:CDS
CAATAAGTTATGTTCAAAAG+CGG 0.652336 7_4:-46805317 None:intergenic
TTTCCATGTCACAGAAACGG+TGG 0.654844 7_4:+46802872 Msa1157750:intron
TTGGTGGATAGAGCTATAGG+AGG 0.655512 7_4:+46808085 Msa1157750:CDS
ACGTGACTACAGAACAGACT+GGG 0.657692 7_4:+46807717 Msa1157750:CDS
TGATTCTAGAGGTGTTGCAG+AGG 0.660259 7_4:+46808535 Msa1157750:CDS
CGGCACAGAAAAGCAGCACG+TGG 0.665131 7_4:+46804876 Msa1157750:CDS
TTGGTAAAGAAGTTTCCACT+CGG 0.667704 7_4:+46807406 Msa1157750:CDS
GTTACAGTTCATGACTCCAA+CGG 0.668698 7_4:+46806054 Msa1157750:CDS
CATAGTAGTTGAAATCCGAG+TGG 0.668936 7_4:-46807421 None:intergenic
TCGATTAGCGCATTTATACG+AGG 0.670614 7_4:+46809674 Msa1157750:CDS
TGTGTTGCTGACAATTGCAA+GGG 0.677060 7_4:+46808575 Msa1157750:CDS
TCTACAAATACCTCAGCCAG+AGG 0.690237 7_4:-46806102 None:intergenic
TCTCTCTGTAGTGACAAGTG+TGG 0.697065 7_4:+46809875 Msa1157750:CDS
TCACCTGAGCAGATGAACCG+AGG 0.700248 7_4:-46803242 None:intergenic
TGGCATGTGTATGCATGATG+AGG 0.703361 7_4:+46802892 Msa1157750:CDS
TGATCCAAAAGAGTTAACTG+TGG 0.703430 7_4:+46810977 Msa1157750:CDS
TAAGTGCTAAAACCAAATGG+TGG 0.707183 7_4:-46806210 None:intergenic
ATAGAGTATAACACATCACA+GGG 0.708331 7_4:+46801920 Msa1157750:CDS
ATTGGCAATAGGCTACAAGG+AGG 0.782057 7_4:+46804918 Msa1157750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCACTTTTTTTTTTTTTT+TGG + chr7_4:46803514-46803533 Msa1157750:intron 10.0%
!!! TTATAGTTTAAGTTTATATA+AGG + chr7_4:46804696-46804715 Msa1157750:intron 10.0%
!! ATATTTATAATGCATAAAAA+AGG + chr7_4:46808435-46808454 Msa1157750:intron 10.0%
!! ATAAATTATTAGTGAAAATA+GGG - chr7_4:46809992-46810011 None:intergenic 10.0%
!! AATAAATTATTAGTGAAAAT+AGG - chr7_4:46809993-46810012 None:intergenic 10.0%
!!! TTCTGAAATTTTAAAAATTT+GGG - chr7_4:46810050-46810069 None:intergenic 10.0%
!!! TAGTTTTAAAAGTAATATTT+TGG + chr7_4:46810274-46810293 Msa1157750:intron 10.0%
!!! TTTTTTTTTTTTTGGTATTC+TGG + chr7_4:46803522-46803541 Msa1157750:intron 15.0%
!!! TGAACAATATATATGATTTT+TGG + chr7_4:46803673-46803692 Msa1157750:intron 15.0%
!! ATAATTACATATTAAACTCA+CGG - chr7_4:46804488-46804507 None:intergenic 15.0%
!! ATTATCTTCATATTTCTTAT+TGG + chr7_4:46807604-46807623 Msa1157750:intron 15.0%
!! TTAAATCATTGGTATTATAA+AGG + chr7_4:46808376-46808395 Msa1157750:intron 15.0%
!!! AAATAAATGATAACTGTTTT+TGG + chr7_4:46809486-46809505 Msa1157750:intron 15.0%
!!! CTTCTGAAATTTTAAAAATT+TGG - chr7_4:46810051-46810070 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr7_4:46810251-46810270 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr7_4:46810250-46810269 Msa1157750:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr7_4:46810377-46810396 Msa1157750:intron 15.0%
!!! TTTTAATTTTGCAATGTGTA+GGG + chr7_4:46802118-46802137 Msa1157750:intron 20.0%
!!! ACTGAAAAAGTTGATTTTTT+TGG + chr7_4:46802323-46802342 Msa1157750:intron 20.0%
!!! CTGAAAAAGTTGATTTTTTT+GGG + chr7_4:46802324-46802343 Msa1157750:intron 20.0%
!! AAGAATTGTACAAATATACA+TGG - chr7_4:46802500-46802519 None:intergenic 20.0%
!!! ATATATGATTTTTGGATACA+AGG + chr7_4:46803681-46803700 Msa1157750:intron 20.0%
!! AAACAAATTCTTCTTATCTA+AGG - chr7_4:46804327-46804346 None:intergenic 20.0%
!!! ATATTTTGCATCTGTATATA+TGG - chr7_4:46804423-46804442 None:intergenic 20.0%
!! TAATTACATATTAAACTCAC+GGG - chr7_4:46804487-46804506 None:intergenic 20.0%
!!! TTTTATACCGATAAATTATC+AGG + chr7_4:46804750-46804769 Msa1157750:intron 20.0%
!! ACATACTAACAATTGAATAT+AGG - chr7_4:46804977-46804996 None:intergenic 20.0%
!!! TTTTTTTTTGAAAAGACGTA+TGG + chr7_4:46805797-46805816 Msa1157750:intron 20.0%
!!! TATGGTGTTTTTTAATTTGT+AGG + chr7_4:46805815-46805834 Msa1157750:intron 20.0%
!!! TTAAAAGTGATTGAATTTTC+AGG + chr7_4:46806946-46806965 Msa1157750:intron 20.0%
!! ACACAAATGTAAATATAGAT+GGG - chr7_4:46807217-46807236 None:intergenic 20.0%
!!! ACTGTTTGATTTTTCTTATA+TGG + chr7_4:46807302-46807321 Msa1157750:intron 20.0%
!!! ATCTGTGTAAAAAGTTTTAT+TGG - chr7_4:46807451-46807470 None:intergenic 20.0%
!!! AAGTTGCATATTTTATCATA+TGG - chr7_4:46807917-46807936 None:intergenic 20.0%
!! AAAGAAGATAATCAACTATT+AGG - chr7_4:46807940-46807959 None:intergenic 20.0%
!! ACTGTAAATTCAAGTATATT+TGG - chr7_4:46808204-46808223 None:intergenic 20.0%
!! TGAAAAGAAAATTCGAAATT+TGG - chr7_4:46808493-46808512 None:intergenic 20.0%
!!! TGATATATCAAAACCTTTTT+TGG - chr7_4:46808746-46808765 None:intergenic 20.0%
!!! GGAGTAAATTCAATTTTTTA+AGG - chr7_4:46808904-46808923 None:intergenic 20.0%
!!! ACTGCTTTGTAAATTAATTT+TGG + chr7_4:46809049-46809068 Msa1157750:intron 20.0%
!!! GTAAATTAATTTTGGAAGTT+TGG + chr7_4:46809057-46809076 Msa1157750:intron 20.0%
!! TTCTATAATAATATTTCCCT+TGG - chr7_4:46809115-46809134 None:intergenic 20.0%
!! ACTAAAAGATCAACTTTATT+TGG + chr7_4:46809286-46809305 Msa1157750:intron 20.0%
!!! GTTATAATAACAATGTTTTC+TGG - chr7_4:46809384-46809403 None:intergenic 20.0%
!!! CATTGTTATTATAACATTAC+AGG + chr7_4:46809389-46809408 Msa1157750:CDS 20.0%
!! ATGTTATAATGGTTAAATGT+TGG - chr7_4:46809512-46809531 None:intergenic 20.0%
!! AACATTTAACCATTATAACA+TGG + chr7_4:46809511-46809530 Msa1157750:intron 20.0%
!!! ACAAAAAGATGGAAATTTTT+TGG + chr7_4:46809946-46809965 Msa1157750:intron 20.0%
!!! ATATTTTCGGATTTAGAAAT+GGG - chr7_4:46810024-46810043 None:intergenic 20.0%
!! TAAACAGTACTTTAATAACA+TGG + chr7_4:46810122-46810141 Msa1157750:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr7_4:46810260-46810279 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr7_4:46810337-46810356 Msa1157750:intron 20.0%
!!! ATTTCATAAGCTTGTTTAAA+AGG - chr7_4:46811107-46811126 None:intergenic 20.0%
!! GGGTTAAAAAAAAACATTTA+TGG - chr7_4:46811239-46811258 None:intergenic 20.0%
! AATCTTTGTGTGAATTTATG+TGG - chr7_4:46801754-46801773 None:intergenic 25.0%
!!! AGATCAATTTTTTCTCCATT+GGG - chr7_4:46801850-46801869 None:intergenic 25.0%
!!! AAGATCAATTTTTTCTCCAT+TGG - chr7_4:46801851-46801870 None:intergenic 25.0%
!! GGAGAAAAAATTGATCTTTT+TGG + chr7_4:46801853-46801872 Msa1157750:CDS 25.0%
! ATAAAAGAGAATTCCCAAAA+GGG - chr7_4:46801882-46801901 None:intergenic 25.0%
! TGTGTTATACTCTATAAACT+TGG - chr7_4:46801915-46801934 None:intergenic 25.0%
!!! ACGTGTTGATTGAAAATTAA+TGG + chr7_4:46802093-46802112 Msa1157750:intron 25.0%
!!! GTTTTAATTTTGCAATGTGT+AGG + chr7_4:46802117-46802136 Msa1157750:intron 25.0%
!!! TTTAATTTTGCAATGTGTAG+GGG + chr7_4:46802119-46802138 Msa1157750:intron 25.0%
! ACACTTCAATCCAATAAATA+TGG - chr7_4:46802271-46802290 None:intergenic 25.0%
!!! AATTTTGGGATCAAATCAAT+TGG - chr7_4:46802452-46802471 None:intergenic 25.0%
! AGTTCATGTAAATCACATTT+CGG + chr7_4:46802743-46802762 Msa1157750:intron 25.0%
! TTCTTATCCTGTCTAATATT+TGG + chr7_4:46802822-46802841 Msa1157750:intron 25.0%
! TCTTATCCTGTCTAATATTT+GGG + chr7_4:46802823-46802842 Msa1157750:intron 25.0%
! TTAATACCCAAATATTAGAC+AGG - chr7_4:46802832-46802851 None:intergenic 25.0%
! ATTCTATGGTTGAAGATTTA+TGG - chr7_4:46803069-46803088 None:intergenic 25.0%
! ACATTGTAGTAGACAAATAT+TGG - chr7_4:46803888-46803907 None:intergenic 25.0%
! ATATTTGTCTACTACAATGT+TGG + chr7_4:46803888-46803907 Msa1157750:intron 25.0%
!! TCTACTATTTAAGTTTGAAG+TGG + chr7_4:46804066-46804085 Msa1157750:intron 25.0%
!!! TCTCGTATTGTTTTATTTTC+AGG + chr7_4:46804131-46804150 Msa1157750:intron 25.0%
! ATTAATGAGTGGCTATTATT+TGG + chr7_4:46804659-46804678 Msa1157750:CDS 25.0%
!!! AGACAGTTAGAATATTTTAG+AGG + chr7_4:46804778-46804797 Msa1157750:CDS 25.0%
!!! GACAGTTAGAATATTTTAGA+GGG + chr7_4:46804779-46804798 Msa1157750:CDS 25.0%
! TAATGATTATGCTAAACGAT+TGG + chr7_4:46804900-46804919 Msa1157750:CDS 25.0%
! TATAGGCAATTACTTGAATA+TGG - chr7_4:46804960-46804979 None:intergenic 25.0%
! ATATGCGAGTTAAATTCTAA+AGG - chr7_4:46805186-46805205 None:intergenic 25.0%
! AGAAAATGAAAAAGCAAAGA+GGG - chr7_4:46805289-46805308 None:intergenic 25.0%
! AAGAAAATGAAAAAGCAAAG+AGG - chr7_4:46805290-46805309 None:intergenic 25.0%
! CAATAAGTTATGTTCAAAAG+CGG - chr7_4:46805320-46805339 None:intergenic 25.0%
!!! TTTTCTCTTTTTCAACCATT+CGG + chr7_4:46805410-46805429 Msa1157750:intron 25.0%
! TAAATATGAAACAAACCGAA+TGG - chr7_4:46805428-46805447 None:intergenic 25.0%
!! ATCACCAAGAAATTCTAAAA+TGG - chr7_4:46805560-46805579 None:intergenic 25.0%
! ACTCATAACAACAAATTTCA+TGG + chr7_4:46805624-46805643 Msa1157750:intron 25.0%
! TCTAAGAAACTATTATGTCA+AGG + chr7_4:46806125-46806144 Msa1157750:CDS 25.0%
! TATTATGTCAAGGCATATTT+GGG + chr7_4:46806135-46806154 Msa1157750:CDS 25.0%
!!! TATATGTGAACCTGTTTTTT+TGG - chr7_4:46806250-46806269 None:intergenic 25.0%
! AATGTTCATGTTATGAACAA+GGG - chr7_4:46806312-46806331 None:intergenic 25.0%
!!! TTTGAAGCTTACATTTTCTA+CGG + chr7_4:46806424-46806443 Msa1157750:CDS 25.0%
! GTTTCTTGCATTAACATAAT+TGG - chr7_4:46806465-46806484 None:intergenic 25.0%
! TTATGTTAATGCAAGAAACA+TGG + chr7_4:46806466-46806485 Msa1157750:CDS 25.0%
! TGAATTACCTTTACTATTCA+GGG + chr7_4:46806679-46806698 Msa1157750:CDS 25.0%
! GTAATCAGAATTTCTATGTA+GGG - chr7_4:46806917-46806936 None:intergenic 25.0%
! TGTAATCAGAATTTCTATGT+AGG - chr7_4:46806918-46806937 None:intergenic 25.0%
! GACACAAATGTAAATATAGA+TGG - chr7_4:46807218-46807237 None:intergenic 25.0%
! TCATTTGAACTAATGGTATT+TGG + chr7_4:46807347-46807366 Msa1157750:intron 25.0%
!! CTAATGGTATTTGGAATATT+AGG + chr7_4:46807356-46807375 Msa1157750:intron 25.0%
!! ACTTTTTACACAGATTCTAA+TGG + chr7_4:46807456-46807475 Msa1157750:CDS 25.0%
!! CTTTTTACACAGATTCTAAT+GGG + chr7_4:46807457-46807476 Msa1157750:CDS 25.0%
!!! TTCCTTATTTTTTCCTTTCT+TGG + chr7_4:46807840-46807859 Msa1157750:intron 25.0%
! AAATTATATCGTGAACCTAA+AGG - chr7_4:46808002-46808021 None:intergenic 25.0%
! TGAAGAATAAAATATACCTG+TGG - chr7_4:46808147-46808166 None:intergenic 25.0%
!! GGTATATTTTATTCTTCATG+CGG + chr7_4:46808149-46808168 Msa1157750:intron 25.0%
!!! TGTCTTGTTTCTTAAAAATG+TGG + chr7_4:46808251-46808270 Msa1157750:intron 25.0%
! ATACCAATGATTTAATAGCA+CGG - chr7_4:46808371-46808390 None:intergenic 25.0%
! GCAATGTCATATGTATATAT+TGG + chr7_4:46808660-46808679 Msa1157750:intron 25.0%
! ATTGGTTATAAATTGTTGCT+TGG + chr7_4:46808678-46808697 Msa1157750:intron 25.0%
! CTTCATAATTACTATCCAAT+TGG + chr7_4:46808705-46808724 Msa1157750:intron 25.0%
!!! TTTGTCATTTCTAGTGTATT+TGG + chr7_4:46808978-46808997 Msa1157750:intron 25.0%
! TTATTATAGAATAGACCCTT+TGG + chr7_4:46809124-46809143 Msa1157750:CDS 25.0%
! TATTATAGAATAGACCCTTT+GGG + chr7_4:46809125-46809144 Msa1157750:CDS 25.0%
!! AAAGATCAACTTTATTTGGT+AGG + chr7_4:46809290-46809309 Msa1157750:intron 25.0%
! AATAACACTATAGGACATAA+TGG - chr7_4:46809452-46809471 None:intergenic 25.0%
! TACTGAACTAATAACACTAT+AGG - chr7_4:46809461-46809480 None:intergenic 25.0%
!! AGCTTGTAACTATATTTTCT+TGG + chr7_4:46809616-46809635 Msa1157750:intron 25.0%
!! TATTTTCGGATTTAGAAATG+GGG - chr7_4:46810023-46810042 None:intergenic 25.0%
!! CATATTTTCGGATTTAGAAA+TGG - chr7_4:46810025-46810044 None:intergenic 25.0%
! CATTTCTAAATCCGAAAATA+TGG + chr7_4:46810023-46810042 Msa1157750:intron 25.0%
!!! AAAATTTGGGACCATATTTT+CGG - chr7_4:46810037-46810056 None:intergenic 25.0%
!!! ATTTTGACTATAATAGTGAC+CGG - chr7_4:46810494-46810513 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG + chr7_4:46810602-46810621 Msa1157750:intron 25.0%
! ATTGTGAGTCAATGAAAATA+TGG + chr7_4:46810747-46810766 Msa1157750:intron 25.0%
! GAACAAGACTTAAAAAAGTT+TGG - chr7_4:46810791-46810810 None:intergenic 25.0%
! GCAAAATATCCAAGAATTAA+AGG - chr7_4:46811181-46811200 None:intergenic 25.0%
!!! AATGTTTTTTTTTAACCCTC+CGG + chr7_4:46811241-46811260 Msa1157750:three_prime_UTR 25.0%
! GAATAAGTGAGTAAAATTTG+AGG + chr7_4:46811322-46811341 Msa1157750:three_prime_UTR 25.0%
! TATATACAATACGACATGTA+AGG - chr7_4:46811360-46811379 None:intergenic 25.0%
! TTTTATCAGACACTTTGTGA+TGG - chr7_4:46801624-46801643 None:intergenic 30.0%
!!! ATCAATTTTTTCTCCATTGG+GGG - chr7_4:46801848-46801867 None:intergenic 30.0%
!!! GATCAATTTTTTCTCCATTG+GGG - chr7_4:46801849-46801868 None:intergenic 30.0%
CATAAAAGAGAATTCCCAAA+AGG - chr7_4:46801883-46801902 None:intergenic 30.0%
!! CTTTTGGGAATTCTCTTTTA+TGG + chr7_4:46801881-46801900 Msa1157750:CDS 30.0%
TATAGAGTATAACACATCAC+AGG + chr7_4:46801919-46801938 Msa1157750:CDS 30.0%
ATAGAGTATAACACATCACA+GGG + chr7_4:46801920-46801939 Msa1157750:CDS 30.0%
AATGACCTGAATAGAATTGT+TGG - chr7_4:46802038-46802057 None:intergenic 30.0%
! TTAATTTTGCAATGTGTAGG+GGG + chr7_4:46802120-46802139 Msa1157750:intron 30.0%
GAACAGGAAATTTATCTATG+TGG + chr7_4:46802195-46802214 Msa1157750:CDS 30.0%
GCTCTATTGACCATATTTAT+TGG + chr7_4:46802258-46802277 Msa1157750:intron 30.0%
ATGGAAAGCAAATTGAATCT+TGG - chr7_4:46802370-46802389 None:intergenic 30.0%
! TTGATTTGATCCCAAAATTC+AGG + chr7_4:46802453-46802472 Msa1157750:intron 30.0%
TGATTTGATCCCAAAATTCA+GGG + chr7_4:46802454-46802473 Msa1157750:intron 30.0%
! TATACAGATCCCTGAATTTT+GGG - chr7_4:46802466-46802485 None:intergenic 30.0%
GTACTTGAGAAATATACACA+TGG - chr7_4:46802555-46802574 None:intergenic 30.0%
TCACATGTAAAATGGACATA+TGG - chr7_4:46802630-46802649 None:intergenic 30.0%
! ATTTTTCCATGTCACAGAAA+CGG + chr7_4:46802869-46802888 Msa1157750:intron 30.0%
ATGTTAAGCACAAGATTCTA+TGG - chr7_4:46803083-46803102 None:intergenic 30.0%
!! TTGATTCACTTTTCTTTGGT+AGG + chr7_4:46803148-46803167 Msa1157750:CDS 30.0%
! TTTTGCGTTTATTCCTATCT+TGG - chr7_4:46803182-46803201 None:intergenic 30.0%
AGATAGGAATAAACGCAAAA+AGG + chr7_4:46803182-46803201 Msa1157750:CDS 30.0%
CCAATCATGGTGAAAAAATA+AGG - chr7_4:46803315-46803334 None:intergenic 30.0%
!!! CCTTATTTTTTCACCATGAT+TGG + chr7_4:46803312-46803331 Msa1157750:intron 30.0%
ACTTCAAAGTAAAATCCAGA+AGG - chr7_4:46803441-46803460 None:intergenic 30.0%
!!! TCAAGGTGTTTTGAGATAAT+TGG + chr7_4:46803704-46803723 Msa1157750:intron 30.0%
ATAATAAATCCGTTCATGTC+TGG + chr7_4:46803757-46803776 Msa1157750:intron 30.0%
CGCATTAAAAGAAGATCTAA+GGG - chr7_4:46803944-46803963 None:intergenic 30.0%
ACGCATTAAAAGAAGATCTA+AGG - chr7_4:46803945-46803964 None:intergenic 30.0%
! CTATTTAAGTTTGAAGTGGT+AGG + chr7_4:46804070-46804089 Msa1157750:intron 30.0%
!! ATTTTCAGGCAAACATAACT+CGG + chr7_4:46804145-46804164 Msa1157750:intron 30.0%
AAATCACATTATGTGGACAA+TGG + chr7_4:46804170-46804189 Msa1157750:CDS 30.0%
AATCACATTATGTGGACAAT+GGG + chr7_4:46804171-46804190 Msa1157750:CDS 30.0%
TTTGCATCTGTATATATGGA+GGG - chr7_4:46804419-46804438 None:intergenic 30.0%
! TTTTGCATCTGTATATATGG+AGG - chr7_4:46804420-46804439 None:intergenic 30.0%
! GGTTTTTCATGCAAATAAGA+AGG - chr7_4:46804564-46804583 None:intergenic 30.0%
ATAAGGTAATTGAAGTCTTC+AGG + chr7_4:46804713-46804732 Msa1157750:intron 30.0%
!! AATTGAAGTCTTCAGGTTTT+TGG + chr7_4:46804720-46804739 Msa1157750:intron 30.0%
CTTGTTGAAACTTTGTAACT+GGG - chr7_4:46805094-46805113 None:intergenic 30.0%
! ACTTGTTGAAACTTTGTAAC+TGG - chr7_4:46805095-46805114 None:intergenic 30.0%
ACTTGAAAGTGAAAACTGTT+TGG + chr7_4:46805159-46805178 Msa1157750:intron 30.0%
CTTGAAAGTGAAAACTGTTT+GGG + chr7_4:46805160-46805179 Msa1157750:intron 30.0%
AAAATGAAAAAGCAAAGAGG+GGG - chr7_4:46805287-46805306 None:intergenic 30.0%
GAAAATGAAAAAGCAAAGAG+GGG - chr7_4:46805288-46805307 None:intergenic 30.0%
! TTTCCATATTCAGGTTATTG+TGG + chr7_4:46805477-46805496 Msa1157750:intron 30.0%
AAACCACAATAACCTGAATA+TGG - chr7_4:46805483-46805502 None:intergenic 30.0%
ATTGTGGTTTATAACTCTCT+TGG + chr7_4:46805493-46805512 Msa1157750:CDS 30.0%
TGTAACACAATATTGAAGAC+AGG - chr7_4:46805692-46805711 None:intergenic 30.0%
TGTCTTCAATATTGTGTTAC+AGG + chr7_4:46805691-46805710 Msa1157750:intron 30.0%
ATATTGTGTTACAGGATGTT+TGG + chr7_4:46805699-46805718 Msa1157750:intron 30.0%
!! TTGTAGGTTTAAGTTGAATC+TGG + chr7_4:46805831-46805850 Msa1157750:intron 30.0%
AAACATTTGCAGGTTATTGA+TGG + chr7_4:46806027-46806046 Msa1157750:intron 30.0%
!!! AGATTCTATTTTTACACCGT+TGG - chr7_4:46806073-46806092 None:intergenic 30.0%
CTATTATGTCAAGGCATATT+TGG + chr7_4:46806134-46806153 Msa1157750:CDS 30.0%
AGCAGATAACGAATTATTTG+AGG - chr7_4:46806288-46806307 None:intergenic 30.0%
CAATGTTCATGTTATGAACA+AGG - chr7_4:46806313-46806332 None:intergenic 30.0%
!! AATGTTTTCTGCTTGTTTTC+AGG + chr7_4:46806338-46806357 Msa1157750:intron 30.0%
AAGTGTATAAACTGATGATC+TGG - chr7_4:46806369-46806388 None:intergenic 30.0%
GTGATGCAAAGTAACTAAAA+TGG - chr7_4:46806523-46806542 None:intergenic 30.0%
!!! ATTTTTTCCTCTTACACTGT+TGG + chr7_4:46806591-46806610 Msa1157750:intron 30.0%
! TTTTTATCCAACAGTGTAAG+AGG - chr7_4:46806601-46806620 None:intergenic 30.0%
!! TAACACTCTTACTTTTGACT+TGG + chr7_4:46806634-46806653 Msa1157750:intron 30.0%
CTGAATTACCTTTACTATTC+AGG + chr7_4:46806678-46806697 Msa1157750:CDS 30.0%
CTTTACTATTCAGGGTATAA+CGG + chr7_4:46806687-46806706 Msa1157750:CDS 30.0%
! TATCTTTGTTTCGACATTTC+AGG + chr7_4:46806761-46806780 Msa1157750:intron 30.0%
TAATTTCTGTAACAGAATGC+TGG + chr7_4:46806811-46806830 Msa1157750:intron 30.0%
CTTATAAGATGTGTTCCATT+TGG - chr7_4:46806853-46806872 None:intergenic 30.0%
TCTTATAAGTCATGAAAGAC+AGG + chr7_4:46806864-46806883 Msa1157750:CDS 30.0%
AATCAATCCATGGATATATC+AGG + chr7_4:46807018-46807037 Msa1157750:CDS 30.0%
TGCTGAATCATTTGAACTAA+TGG + chr7_4:46807340-46807359 Msa1157750:intron 30.0%
! TGGTATTTGGAATATTAGGT+TGG + chr7_4:46807360-46807379 Msa1157750:intron 30.0%
TAATGAAATGCAGTATTGCA+AGG - chr7_4:46807522-46807541 None:intergenic 30.0%
!! ATTCATTTTTCTCTGCTCTA+GGG + chr7_4:46807656-46807675 Msa1157750:intron 30.0%
CTCCAAGAAAGGAAAAAATA+AGG - chr7_4:46807845-46807864 None:intergenic 30.0%
!!! CTTATTTTTTCCTTTCTTGG+AGG + chr7_4:46807843-46807862 Msa1157750:intron 30.0%
TGCAGTTATATCAATCCTTT+AGG + chr7_4:46807984-46808003 Msa1157750:intron 30.0%
TTGTCCTTTCAGATTAATCT+TGG + chr7_4:46808025-46808044 Msa1157750:intron 30.0%
TGTCCTTTCAGATTAATCTT+GGG + chr7_4:46808026-46808045 Msa1157750:intron 30.0%
TATCCCAAGATTAATCTGAA+AGG - chr7_4:46808032-46808051 None:intergenic 30.0%
! TAAGACAGAATTCTCAGTTT+TGG + chr7_4:46808066-46808085 Msa1157750:CDS 30.0%
CTCTAAATAGATTGCTAATC+AGG + chr7_4:46808174-46808193 Msa1157750:intron 30.0%
GTTAACCATATATGCCAAAA+GGG - chr7_4:46808277-46808296 None:intergenic 30.0%
TGTTAACCATATATGCCAAA+AGG - chr7_4:46808278-46808297 None:intergenic 30.0%
! CGAATTTTCTTTTCACCAAT+AGG + chr7_4:46808498-46808517 Msa1157750:intron 30.0%
! ATTTTCTTTTCACCAATAGG+AGG + chr7_4:46808501-46808520 Msa1157750:intron 30.0%
! ATCATGTCAATCCATTTTAG+TGG + chr7_4:46808762-46808781 Msa1157750:intron 30.0%
! ACCAATTTTCAATTACACTG+TGG + chr7_4:46808878-46808897 Msa1157750:intron 30.0%
!! TCATTTCTAGTGTATTTGGT+TGG + chr7_4:46808982-46809001 Msa1157750:intron 30.0%
!!! GCTTTTTCTACTTATTTTGC+AGG + chr7_4:46809088-46809107 Msa1157750:intron 30.0%
AAAGTGGAGAATATATTTCC+TGG - chr7_4:46809181-46809200 None:intergenic 30.0%
! ATGCATGTAATTCACCTTTT+CGG - chr7_4:46809216-46809235 None:intergenic 30.0%
TCCTGAAAATGTTGTTACAT+GGG - chr7_4:46809340-46809359 None:intergenic 30.0%
ATCCTGAAAATGTTGTTACA+TGG - chr7_4:46809341-46809360 None:intergenic 30.0%
GAAAGCCAATATTTAAGCAA+GGG - chr7_4:46809430-46809449 None:intergenic 30.0%
TTAAGCTGTCCATGTTATAA+TGG - chr7_4:46809523-46809542 None:intergenic 30.0%
! TATATTTTCTTGGTCCTTTC+AGG + chr7_4:46809626-46809645 Msa1157750:intron 30.0%
GATCTGTGCATAAATTTGAT+TGG - chr7_4:46809841-46809860 None:intergenic 30.0%
! ATTTTCGGATTTAGAAATGG+GGG - chr7_4:46810022-46810041 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr7_4:46810168-46810187 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr7_4:46810169-46810188 Msa1157750:intron 30.0%
! TGTGCAGAGTATTAATTGAA+GGG + chr7_4:46810303-46810322 Msa1157750:intron 30.0%
!! GTATAAATAAGCGTCGAATT+CGG + chr7_4:46810652-46810671 Msa1157750:intron 30.0%
ACTTCTTTGATCTAATACCA+AGG - chr7_4:46810843-46810862 None:intergenic 30.0%
GTATTAGATCAAAGAAGTGA+GGG + chr7_4:46810845-46810864 Msa1157750:intron 30.0%
CAAAGTAAATGGTAAAAGTG+CGG - chr7_4:46811022-46811041 None:intergenic 30.0%
GTTACTACTGTCAAAGTAAA+TGG - chr7_4:46811033-46811052 None:intergenic 30.0%
! TCTACAAAGCATCAAAAAGA+TGG - chr7_4:46811055-46811074 None:intergenic 30.0%
! TAAAACCACTTGTTGAATGA+AGG + chr7_4:46811076-46811095 Msa1157750:three_prime_UTR 30.0%
! ATAAGCTTGTTTAAAAGGCA+AGG - chr7_4:46811102-46811121 None:intergenic 30.0%
ACAACTATGACAGATTATCA+TGG - chr7_4:46811147-46811166 None:intergenic 30.0%
!! TTTTGGAGGAGTTAAAGATA+TGG - chr7_4:46811210-46811229 None:intergenic 30.0%
! AACATTTATGGAAGCTGTTT+TGG - chr7_4:46811227-46811246 None:intergenic 30.0%
TAATAAGTTCCATTCTTAGG+TGG - chr7_4:46811293-46811312 None:intergenic 30.0%
ACCTAAGAATGGAACTTATT+AGG + chr7_4:46811292-46811311 Msa1157750:three_prime_UTR 30.0%
ACCTAATAAGTTCCATTCTT+AGG - chr7_4:46811296-46811315 None:intergenic 30.0%
ATCCAATGGTACAGAGATAA+AGG - chr7_4:46801650-46801669 None:intergenic 35.0%
GATACACATGGAAGTGATTA+TGG + chr7_4:46801667-46801686 Msa1157750:intron 35.0%
!! ATCTTTTTGGTGACCCTTTT+GGG + chr7_4:46801866-46801885 Msa1157750:CDS 35.0%
! TTGGGAATTCTCTTTTATGG+AGG + chr7_4:46801884-46801903 Msa1157750:CDS 35.0%
! ATACTCATGATGATGTTGGA+TGG + chr7_4:46801981-46802000 Msa1157750:CDS 35.0%
ACTGTTGATCAGTACTATGT+TGG + chr7_4:46802010-46802029 Msa1157750:CDS 35.0%
TGGTTCCAACAATTCTATTC+AGG + chr7_4:46802030-46802049 Msa1157750:CDS 35.0%
GCAAAATGTGTTGGATTCTA+TGG + chr7_4:46802150-46802169 Msa1157750:CDS 35.0%
TTCTATGGTTCATGCTCTAT+TGG + chr7_4:46802165-46802184 Msa1157750:CDS 35.0%
! GTATACAGATCCCTGAATTT+TGG - chr7_4:46802467-46802486 None:intergenic 35.0%
! TTTGCATTCTTTTGTGCTAC+TGG + chr7_4:46802582-46802601 Msa1157750:intron 35.0%
CATTGGGTTCACATGTAAAA+TGG - chr7_4:46802638-46802657 None:intergenic 35.0%
TATAACCCTCACAAACATGA+AGG - chr7_4:46802802-46802821 None:intergenic 35.0%
ATGATTGATCAGACTACACT+TGG + chr7_4:46802935-46802954 Msa1157750:CDS 35.0%
! TTCGATTTGACTCCAAGAAT+TGG + chr7_4:46802980-46802999 Msa1157750:CDS 35.0%
ATTTGACTCCAAGAATTGGT+TGG + chr7_4:46802984-46803003 Msa1157750:CDS 35.0%
TCAATTTGCCAACCAATTCT+TGG - chr7_4:46802995-46803014 None:intergenic 35.0%
!! GGCTTTGATTCACTTTTCTT+TGG + chr7_4:46803144-46803163 Msa1157750:CDS 35.0%
AGTTTAAGAGACACCAATCA+TGG - chr7_4:46803328-46803347 None:intergenic 35.0%
AAAGATCTGGAAGAACACAT+CGG - chr7_4:46803388-46803407 None:intergenic 35.0%
TCAAAGTAAAATCCAGAAGG+AGG - chr7_4:46803438-46803457 None:intergenic 35.0%
ATTCATGTTATCCTTCAAGC+AGG - chr7_4:46803567-46803586 None:intergenic 35.0%
!! GATTTTTGGATACAAGGTCA+AGG + chr7_4:46803687-46803706 Msa1157750:intron 35.0%
TTGGAATGAATGAGAGTAAG+AGG + chr7_4:46803723-46803742 Msa1157750:intron 35.0%
TGGAATGAATGAGAGTAAGA+GGG + chr7_4:46803724-46803743 Msa1157750:intron 35.0%
AGTGTGCAATGTATATCACT+AGG - chr7_4:46803840-46803859 None:intergenic 35.0%
ATATACATTGCACACTGCAT+AGG + chr7_4:46803844-46803863 Msa1157750:CDS 35.0%
! CTAGAATCATAGTGTTGTTG+AGG - chr7_4:46804020-46804039 None:intergenic 35.0%
! ACAACACTATGATTCTAGCT+TGG + chr7_4:46804022-46804041 Msa1157750:intron 35.0%
AGTATCAATACGCACATACA+TGG + chr7_4:46804205-46804224 Msa1157750:CDS 35.0%
AACTTAGAACCCTAGTCAAA+GGG - chr7_4:46804278-46804297 None:intergenic 35.0%
!!! TGTGCTTTGACTTGTGATTT+TGG + chr7_4:46804349-46804368 Msa1157750:intron 35.0%
! GATTTTGGATGCACAACTTT+AGG + chr7_4:46804364-46804383 Msa1157750:intron 35.0%
AATATGCTGCAAATGAGTCA+TGG + chr7_4:46804438-46804457 Msa1157750:CDS 35.0%
AAGAAATCGTCAGTCTTGAT+TGG - chr7_4:46804464-46804483 None:intergenic 35.0%
AAGAAGGAAAACGTCATACA+GGG - chr7_4:46804548-46804567 None:intergenic 35.0%
TAAGAAGGAAAACGTCATAC+AGG - chr7_4:46804549-46804568 None:intergenic 35.0%
TTTGCACGATCTGAATAACT+GGG - chr7_4:46804585-46804604 None:intergenic 35.0%
ATTTGCACGATCTGAATAAC+TGG - chr7_4:46804586-46804605 None:intergenic 35.0%
AGTTATTCAGATCGTGCAAA+TGG + chr7_4:46804585-46804604 Msa1157750:intron 35.0%
CTTGCAGCCTGATAATTTAT+CGG - chr7_4:46804760-46804779 None:intergenic 35.0%
TCAGCTAATGAGTCTGTATT+TGG - chr7_4:46804820-46804839 None:intergenic 35.0%
TATGCTAAACGATTGGCAAT+AGG + chr7_4:46804907-46804926 Msa1157750:CDS 35.0%
TTGCTTGGTTGAATCAACAT+CGG + chr7_4:46805052-46805071 Msa1157750:CDS 35.0%
CATAAGCTCTTTCCATATTC+AGG + chr7_4:46805468-46805487 Msa1157750:intron 35.0%
TGGTTTATAACTCTCTTGGT+TGG + chr7_4:46805497-46805516 Msa1157750:CDS 35.0%
!!! GGTGCCATTTTAGAATTTCT+TGG + chr7_4:46805553-46805572 Msa1157750:intron 35.0%
AGAATCTCAAATTCTACCTC+TGG + chr7_4:46806086-46806105 Msa1157750:CDS 35.0%
GAAAATGCAAGCCAATACTT+GGG - chr7_4:46806180-46806199 None:intergenic 35.0%
TGAAAATGCAAGCCAATACT+TGG - chr7_4:46806181-46806200 None:intergenic 35.0%
TAAGTGCTAAAACCAAATGG+TGG - chr7_4:46806213-46806232 None:intergenic 35.0%
GTGTAAGTGCTAAAACCAAA+TGG - chr7_4:46806216-46806235 None:intergenic 35.0%
TGTATAAACTGATGATCTGG+TGG - chr7_4:46806366-46806385 None:intergenic 35.0%
AGTCATGAAAAGTCTTCCAT+AGG + chr7_4:46806392-46806411 Msa1157750:CDS 35.0%
CTTCAAATTTCCTTGACCTA+TGG - chr7_4:46806411-46806430 None:intergenic 35.0%
GAAATTACAAACATGCTGAG+AGG - chr7_4:46806567-46806586 None:intergenic 35.0%
!!! ACTCTTACTTTTGACTTGGA+AGG + chr7_4:46806638-46806657 Msa1157750:intron 35.0%
CGTTATACCCTGAATAGTAA+AGG - chr7_4:46806689-46806708 None:intergenic 35.0%
AACTGATCAAAAAGATCCAC+AGG + chr7_4:46806710-46806729 Msa1157750:CDS 35.0%
TAAGATGTGTTCCATTTGGA+CGG - chr7_4:46806849-46806868 None:intergenic 35.0%
TGATGCACTTCATCTAGTAT+TGG - chr7_4:46806995-46807014 None:intergenic 35.0%
CAAAACACCTGATATATCCA+TGG - chr7_4:46807028-46807047 None:intergenic 35.0%
TACCAGACAGTACAAAGAAA+AGG + chr7_4:46807150-46807169 Msa1157750:CDS 35.0%
! TTCCTTTTCTTTGTACTGTC+TGG - chr7_4:46807155-46807174 None:intergenic 35.0%
ACTCCATCTTCAATAGGTAT+AGG - chr7_4:46807387-46807406 None:intergenic 35.0%
ATACCTATTGAAGATGGAGT+TGG + chr7_4:46807387-46807406 Msa1157750:CDS 35.0%
TTACCAACTCCATCTTCAAT+AGG - chr7_4:46807393-46807412 None:intergenic 35.0%
TTGGTAAAGAAGTTTCCACT+CGG + chr7_4:46807406-46807425 Msa1157750:CDS 35.0%
! ATGGGCGTGATTTTATCAAA+AGG + chr7_4:46807475-46807494 Msa1157750:CDS 35.0%
! TGGGCGTGATTTTATCAAAA+GGG + chr7_4:46807476-46807495 Msa1157750:CDS 35.0%
GCAGAGAAAAATGAATGACT+TGG - chr7_4:46807652-46807671 None:intergenic 35.0%
!! CATTCATTTTTCTCTGCTCT+AGG + chr7_4:46807655-46807674 Msa1157750:intron 35.0%
GGGAAAACTTAAATCTGTTG+TGG + chr7_4:46807676-46807695 Msa1157750:intron 35.0%
TGGGTAATAATTTCCAGCAA+CGG - chr7_4:46807761-46807780 None:intergenic 35.0%
TCTATCAAAGCTCACTTACT+GGG - chr7_4:46807780-46807799 None:intergenic 35.0%
TTCTATCAAAGCTCACTTAC+TGG - chr7_4:46807781-46807800 None:intergenic 35.0%
CAATAACAATCCTCCAAGAA+AGG - chr7_4:46807856-46807875 None:intergenic 35.0%
! CATGCATGTCTAAAATCTGT+TGG + chr7_4:46807886-46807905 Msa1157750:intron 35.0%
! TCTTAAAAATGTGGCCCTTT+TGG + chr7_4:46808260-46808279 Msa1157750:intron 35.0%
! AAGCCGTGCTATTAAATCAT+TGG + chr7_4:46808365-46808384 Msa1157750:intron 35.0%
TGCATAAAAAAGGCAACTTG+TGG + chr7_4:46808445-46808464 Msa1157750:intron 35.0%
!! CTATCCAATTGGTCTTAACA+CGG + chr7_4:46808716-46808735 Msa1157750:intron 35.0%
TTAACACGGATAGCCAAAAA+AGG + chr7_4:46808730-46808749 Msa1157750:intron 35.0%
AAATTATGACCTTGACGCTT+TGG - chr7_4:46808795-46808814 None:intergenic 35.0%
! AAAGCGTCAAGGTCATAATT+TGG + chr7_4:46808794-46808813 Msa1157750:intron 35.0%
GCCACAGTGTAATTGAAAAT+TGG - chr7_4:46808882-46808901 None:intergenic 35.0%
AAGTCACTATTGACAAGGTT+GGG - chr7_4:46808925-46808944 None:intergenic 35.0%
TAAGTCACTATTGACAAGGT+TGG - chr7_4:46808926-46808945 None:intergenic 35.0%
GGTATAAGTCACTATTGACA+AGG - chr7_4:46808930-46808949 None:intergenic 35.0%
!!! GTGTTTTTGCTGATTTATGC+TGG + chr7_4:46809017-46809036 Msa1157750:intron 35.0%
!!! TACTTATTTTGCAGGTCCAA+GGG + chr7_4:46809096-46809115 Msa1157750:intron 35.0%
ATATTTCCTGGCCAAAAGTA+CGG - chr7_4:46809169-46809188 None:intergenic 35.0%
!!! TTTGTTAGCCTTTTCCGAAA+AGG + chr7_4:46809199-46809218 Msa1157750:CDS 35.0%
! GTAATTCACCTTTTCGGAAA+AGG - chr7_4:46809210-46809229 None:intergenic 35.0%
GAAAAGGTGAATTACATGCA+TGG + chr7_4:46809215-46809234 Msa1157750:intron 35.0%
! ACCCATGTAACAACATTTTC+AGG + chr7_4:46809336-46809355 Msa1157750:CDS 35.0%
GCTATCCCTTGCTTAAATAT+TGG + chr7_4:46809422-46809441 Msa1157750:intron 35.0%
GGAAAGCCAATATTTAAGCA+AGG - chr7_4:46809431-46809450 None:intergenic 35.0%
TAACATGGACAGCTTAATGA+TGG + chr7_4:46809526-46809545 Msa1157750:intron 35.0%
! GTTGACATAAGATTAGCTCA+GGG + chr7_4:46809749-46809768 Msa1157750:intron 35.0%
CGATAGGTTTCACAAAAAGA+TGG + chr7_4:46809935-46809954 Msa1157750:intron 35.0%
AGAATAAGTCTCGTATTCAG+TGG - chr7_4:46810080-46810099 None:intergenic 35.0%
! GTGTGCAGAGTATTAATTGA+AGG + chr7_4:46810302-46810321 Msa1157750:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr7_4:46810367-46810386 Msa1157750:intron 35.0%
GTGATGTGACATTACATACA+TGG - chr7_4:46810446-46810465 None:intergenic 35.0%
TGTAATGTCACATCACTTTG+TGG + chr7_4:46810450-46810469 Msa1157750:intron 35.0%
ACGTTGAATAATACTCCATC+CGG - chr7_4:46810624-46810643 None:intergenic 35.0%
! AGTTTGGCTTAAATGCACTT+CGG - chr7_4:46810775-46810794 None:intergenic 35.0%
GGTATTAGATCAAAGAAGTG+AGG + chr7_4:46810844-46810863 Msa1157750:intron 35.0%
GCTTATCTGCAAATCAAGAA+AGG + chr7_4:46810874-46810893 Msa1157750:CDS 35.0%
AAATCAAGAAAGGACAGAGA+TGG + chr7_4:46810884-46810903 Msa1157750:CDS 35.0%
! TGGAGAAGAAAAGACTTGTT+TGG + chr7_4:46810904-46810923 Msa1157750:CDS 35.0%
! AGACTTGTTTGGAAAGTAGA+AGG + chr7_4:46810915-46810934 Msa1157750:CDS 35.0%
! GACTTGTTTGGAAAGTAGAA+GGG + chr7_4:46810916-46810935 Msa1157750:CDS 35.0%
! GTTAACTCTTTTGGATCAAC+TGG - chr7_4:46810975-46810994 None:intergenic 35.0%
TGATCCAAAAGAGTTAACTG+TGG + chr7_4:46810977-46810996 Msa1157750:CDS 35.0%
TGACAGATTATCATGGTCAA+GGG - chr7_4:46811140-46811159 None:intergenic 35.0%
ATGACAGATTATCATGGTCA+AGG - chr7_4:46811141-46811160 None:intergenic 35.0%
! AGTCTGAAGCCTTTAATTCT+TGG + chr7_4:46811169-46811188 Msa1157750:three_prime_UTR 35.0%
!! ATTTATGGAAGCTGTTTTGG+AGG - chr7_4:46811224-46811243 None:intergenic 35.0%
TACAATACGACATGTAAGGT+TGG - chr7_4:46811356-46811375 None:intergenic 35.0%
CACCTTTATCTCTGTACCAT+TGG + chr7_4:46801645-46801664 Msa1157750:intron 40.0%
TCTGTACCATTGGATACACA+TGG + chr7_4:46801655-46801674 Msa1157750:intron 40.0%
TCACTTCCATGTGTATCCAA+TGG - chr7_4:46801664-46801683 None:intergenic 40.0%
!! GAAAGAAGAGTACTTCCACT+TGG - chr7_4:46801725-46801744 None:intergenic 40.0%
!! GATCTTTTTGGTGACCCTTT+TGG + chr7_4:46801865-46801884 Msa1157750:CDS 40.0%
! GCTCATACTCATGATGATGT+TGG + chr7_4:46801977-46801996 Msa1157750:CDS 40.0%
! CTCTATTGGCTGATAAGAAC+AGG + chr7_4:46802179-46802198 Msa1157750:CDS 40.0%
GTTACTACTTGTGTGCATAG+AGG + chr7_4:46802289-46802308 Msa1157750:intron 40.0%
ACAATCAACACTTCTCCTCA+GGG - chr7_4:46802401-46802420 None:intergenic 40.0%
TACAATCAACACTTCTCCTC+AGG - chr7_4:46802402-46802421 None:intergenic 40.0%
TTTACATGTGAACCCAATGC+AGG + chr7_4:46802639-46802658 Msa1157750:intron 40.0%
!! GTTAAGCAGCTTGTTAGTTC+TGG + chr7_4:46802712-46802731 Msa1157750:CDS 40.0%
AGTCATCCTTCATGTTTGTG+AGG + chr7_4:46802793-46802812 Msa1157750:intron 40.0%
GTCATCCTTCATGTTTGTGA+GGG + chr7_4:46802794-46802813 Msa1157750:intron 40.0%
CGAACTCCTCTTTCAGAAAT+CGG - chr7_4:46802964-46802983 None:intergenic 40.0%
TGCTGTGCAGGCTTATTTAT+TGG + chr7_4:46803030-46803049 Msa1157750:CDS 40.0%
GCTGTGCAGGCTTATTTATT+GGG + chr7_4:46803031-46803050 Msa1157750:CDS 40.0%
!! AACTGTCAGAAGTACTATGC+AGG + chr7_4:46803119-46803138 Msa1157750:intron 40.0%
GTAGGATCGATTACCAAGAT+AGG + chr7_4:46803166-46803185 Msa1157750:CDS 40.0%
CAAAAAGGAGAAGAGTCTTG+AGG + chr7_4:46803197-46803216 Msa1157750:CDS 40.0%
AGAAGAGTCTTGAGGTTATC+TGG + chr7_4:46803205-46803224 Msa1157750:CDS 40.0%
AAGGAGGTTCATAGTTCTCA+GGG - chr7_4:46803422-46803441 None:intergenic 40.0%
TTTGACTACTTCCTGCTTGA+AGG + chr7_4:46803553-46803572 Msa1157750:intron 40.0%
CTGCATAGGATTAACTCTGA+AGG + chr7_4:46803858-46803877 Msa1157750:CDS 40.0%
CTCGGACAAATCACATTATG+TGG + chr7_4:46804163-46804182 Msa1157750:CDS 40.0%
GCTCATTCATTACGTGAACA+AGG + chr7_4:46804245-46804264 Msa1157750:CDS 40.0%
ACTTAGAACCCTAGTCAAAG+GGG - chr7_4:46804277-46804296 None:intergenic 40.0%
GAACTTAGAACCCTAGTCAA+AGG - chr7_4:46804279-46804298 None:intergenic 40.0%
! TTGGATGCACAACTTTAGGA+TGG + chr7_4:46804368-46804387 Msa1157750:intron 40.0%
GAAAACGTCATACAGGGAAA+AGG - chr7_4:46804542-46804561 None:intergenic 40.0%
CGCTATGTCAGATTAATGAG+TGG + chr7_4:46804648-46804667 Msa1157750:CDS 40.0%
TAATGACATTGTCTCTGTGC+AGG + chr7_4:46805001-46805020 Msa1157750:intron 40.0%
! GTTGAATCAACATCGGTTAC+TGG + chr7_4:46805059-46805078 Msa1157750:CDS 40.0%
! ACAGAAGTTGAACTGGTTCA+AGG + chr7_4:46805347-46805366 Msa1157750:CDS 40.0%
! ACTGGTTCAAGGAAAGAGTT+TGG + chr7_4:46805358-46805377 Msa1157750:CDS 40.0%
ATAACTCTCTTGGTTGGAAG+AGG + chr7_4:46805503-46805522 Msa1157750:CDS 40.0%
TTGAAGCTGCAAACATTTGC+AGG + chr7_4:46806017-46806036 Msa1157750:intron 40.0%
GTTACAGTTCATGACTCCAA+CGG + chr7_4:46806054-46806073 Msa1157750:CDS 40.0%
TCAGTTTCTGTACCACCATT+TGG + chr7_4:46806198-46806217 Msa1157750:CDS 40.0%
GAAAAGTCTTCCATAGGTCA+AGG + chr7_4:46806398-46806417 Msa1157750:CDS 40.0%
TACAAACATGCTGAGAGGAA+AGG - chr7_4:46806562-46806581 None:intergenic 40.0%
!!! ACTTTTGACTTGGAAGGTTG+AGG + chr7_4:46806644-46806663 Msa1157750:intron 40.0%
TGATCAAAAAGATCCACAGG+TGG + chr7_4:46806713-46806732 Msa1157750:intron 40.0%
GATCAAAAAGATCCACAGGT+GGG + chr7_4:46806714-46806733 Msa1157750:intron 40.0%
TAGTAAGAATAACCCACCTG+TGG - chr7_4:46806729-46806748 None:intergenic 40.0%
GCTTATATCTTCCGTCCAAA+TGG + chr7_4:46806835-46806854 Msa1157750:CDS 40.0%
!! CTTCATCTAGTATTGGTCCA+TGG - chr7_4:46806988-46807007 None:intergenic 40.0%
TGCATCAACGAATCAATCCA+TGG + chr7_4:46807008-46807027 Msa1157750:CDS 40.0%
GGTCCTATACCTATTGAAGA+TGG + chr7_4:46807381-46807400 Msa1157750:CDS 40.0%
CATAGTAGTTGAAATCCGAG+TGG - chr7_4:46807424-46807443 None:intergenic 40.0%
CACTCGGATTTCAACTACTA+TGG + chr7_4:46807422-46807441 Msa1157750:CDS 40.0%
TGAAAAGTGACTCAAGTGCA+AGG - chr7_4:46807582-46807601 None:intergenic 40.0%
GGGTAATAATTTCCAGCAAC+GGG - chr7_4:46807760-46807779 None:intergenic 40.0%
!! GACAGAATTCTCAGTTTTGG+TGG + chr7_4:46808069-46808088 Msa1157750:CDS 40.0%
!! GTTTTGGTGGATAGAGCTAT+AGG + chr7_4:46808082-46808101 Msa1157750:CDS 40.0%
! TTGCTGCTTGATGATTCTAG+AGG + chr7_4:46808524-46808543 Msa1157750:CDS 40.0%
! TGTGTTGCTGACAATTGCAA+GGG + chr7_4:46808575-46808594 Msa1157750:CDS 40.0%
!! TCACCGACTTTGAAAAACCA+GGG + chr7_4:46808616-46808635 Msa1157750:intron 40.0%
AAGAAAACAATGATAGCCCC+TGG - chr7_4:46808636-46808655 None:intergenic 40.0%
CTATCCGTGTTAAGACCAAT+TGG - chr7_4:46808723-46808742 None:intergenic 40.0%
TTGGTCAGCTTCCACTAAAA+TGG - chr7_4:46808776-46808795 None:intergenic 40.0%
! TTATACCTACCTAGCCTTTG+TGG + chr7_4:46808943-46808962 Msa1157750:intron 40.0%
AAAACTGCACATTGCCACAA+AGG - chr7_4:46808960-46808979 None:intergenic 40.0%
!!! CTACTTATTTTGCAGGTCCA+AGG + chr7_4:46809095-46809114 Msa1157750:intron 40.0%
TCGGAAAAGGCTAACAAAAG+TGG - chr7_4:46809197-46809216 None:intergenic 40.0%
GGTAGGATGATAAAGATGAC+TGG + chr7_4:46809307-46809326 Msa1157750:intron 40.0%
!! AGCATTGCTTTATTTGTGCG+CGG + chr7_4:46809554-46809573 Msa1157750:intron 40.0%
TCCTTTCAGGAACTTGATCA+AGG + chr7_4:46809639-46809658 Msa1157750:intron 40.0%
CCTTTCAGGAACTTGATCAA+GGG + chr7_4:46809640-46809659 Msa1157750:intron 40.0%
CGTATAAATGCGCTAATCGA+AGG - chr7_4:46809674-46809693 None:intergenic 40.0%
TCGATTAGCGCATTTATACG+AGG + chr7_4:46809674-46809693 Msa1157750:CDS 40.0%
! CGTTGACATAAGATTAGCTC+AGG + chr7_4:46809748-46809767 Msa1157750:intron 40.0%
! GAGTTGAAAAAGCTTTTCCC+AGG + chr7_4:46809897-46809916 Msa1157750:CDS 40.0%
! AAAGCTTTTCCCAGGAAAGA+AGG + chr7_4:46809905-46809924 Msa1157750:CDS 40.0%
GAAAGAAGGTAGACTACGAT+AGG + chr7_4:46809919-46809938 Msa1157750:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr7_4:46810407-46810426 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr7_4:46810407-46810426 Msa1157750:intron 40.0%
TGACTATAATAGTGACCGGA+GGG - chr7_4:46810490-46810509 None:intergenic 40.0%
TTGACTATAATAGTGACCGG+AGG - chr7_4:46810491-46810510 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+TGG + chr7_4:46810606-46810625 Msa1157750:intron 40.0%
!! ATAAGCGTCGAATTCGGTAT+TGG + chr7_4:46810658-46810677 Msa1157750:intron 40.0%
! GACTGAAGTATGCTTTTCCT+TGG + chr7_4:46810823-46810842 Msa1157750:intron 40.0%
!! TGGAAATGGAGGTGTTTCAA+GGG + chr7_4:46810944-46810963 Msa1157750:CDS 40.0%
! AGCTCCACAGTTAACTCTTT+TGG - chr7_4:46810984-46811003 None:intergenic 40.0%
! GTAAAAGTGCGGATTTCCAT+TGG - chr7_4:46811011-46811030 None:intergenic 40.0%
CACTGTGCATGATAACCAAG+TGG + chr7_4:46801707-46801726 Msa1157750:five_prime_UTR 45.0%
! CAGTAACGTTTTTCCGCTTC+TGG + chr7_4:46801787-46801806 Msa1157750:five_prime_UTR 45.0%
AACTCTTCACACTCCAGAAG+CGG - chr7_4:46801803-46801822 None:intergenic 45.0%
!!! CGTCATTTTTCATCCCCCAA+TGG + chr7_4:46801832-46801851 Msa1157750:exon 45.0%
TGGGAAGCTCAATGTTCATC+TGG + chr7_4:46801952-46801971 Msa1157750:CDS 45.0%
GGCTTGTGTGCAAAATGTGT+TGG + chr7_4:46802141-46802160 Msa1157750:CDS 45.0%
! CTGGTATAAGAGCATAGCAG+AGG + chr7_4:46802601-46802620 Msa1157750:intron 45.0%
GCTGAAAAAAGGCCTGCATT+GGG - chr7_4:46802654-46802673 None:intergenic 45.0%
ATCCCACCATCGCTGAAAAA+AGG - chr7_4:46802665-46802684 None:intergenic 45.0%
TTTCCATGTCACAGAAACGG+TGG + chr7_4:46802872-46802891 Msa1157750:intron 45.0%
TGGCATGTGTATGCATGATG+AGG + chr7_4:46802892-46802911 Msa1157750:CDS 45.0%
!! TGGACACCGATTTCTGAAAG+AGG + chr7_4:46802955-46802974 Msa1157750:CDS 45.0%
TGCACAGCAGAATGTCCAAA+CGG - chr7_4:46803019-46803038 None:intergenic 45.0%
!! GTCAGAAGTACTATGCAGGT+TGG + chr7_4:46803123-46803142 Msa1157750:intron 45.0%
AGTCTTGAGGTTATCTGGCA+AGG + chr7_4:46803210-46803229 Msa1157750:CDS 45.0%
GTGTTCTTCCAGATCTTTGC+TGG + chr7_4:46803390-46803409 Msa1157750:intron 45.0%
GAAGGAGGTTCATAGTTCTC+AGG - chr7_4:46803423-46803442 None:intergenic 45.0%
GAGAACTATGAACCTCCTTC+TGG + chr7_4:46803423-46803442 Msa1157750:CDS 45.0%
TCTAGCACACCAGACATGAA+CGG - chr7_4:46803769-46803788 None:intergenic 45.0%
AGTACATCCACACTGCAAGT+AGG - chr7_4:46803809-46803828 None:intergenic 45.0%
!! ACATACATGGTACCGACAGT+TGG + chr7_4:46804218-46804237 Msa1157750:CDS 45.0%
GAATGAGCTTGTCCAACTGT+CGG - chr7_4:46804233-46804252 None:intergenic 45.0%
CTTAGAACCCTAGTCAAAGG+GGG - chr7_4:46804276-46804295 None:intergenic 45.0%
CAGATCGTGCAAATGGTTTC+TGG + chr7_4:46804592-46804611 Msa1157750:CDS 45.0%
CTGACATAGCGTTTCAAAGC+TGG - chr7_4:46804639-46804658 None:intergenic 45.0%
TTTAGAGGGCGAAAGAACTC+AGG + chr7_4:46804793-46804812 Msa1157750:CDS 45.0%
TTAGAGGGCGAAAGAACTCA+GGG + chr7_4:46804794-46804813 Msa1157750:CDS 45.0%
ACGATTGGCAATAGGCTACA+AGG + chr7_4:46804915-46804934 Msa1157750:CDS 45.0%
ATTGGCAATAGGCTACAAGG+AGG + chr7_4:46804918-46804937 Msa1157750:CDS 45.0%
! GAAACTGGTTTCGTCATCAC+TGG + chr7_4:46805028-46805047 Msa1157750:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr7_4:46805222-46805241 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr7_4:46805223-46805242 None:intergenic 45.0%
TCCTGCAACAGAAGTTGAAC+TGG + chr7_4:46805340-46805359 Msa1157750:CDS 45.0%
ACCAGTTCAACTTCTGTTGC+AGG - chr7_4:46805344-46805363 None:intergenic 45.0%
GTGATTCGAATTCCTGTGAG+TGG + chr7_4:46805532-46805551 Msa1157750:intron 45.0%
! TCTAAAATGGCACCACTCAC+AGG - chr7_4:46805547-46805566 None:intergenic 45.0%
TCAAATTCTACCTCTGGCTG+AGG + chr7_4:46806092-46806111 Msa1157750:CDS 45.0%
TCTACAAATACCTCAGCCAG+AGG - chr7_4:46806105-46806124 None:intergenic 45.0%
CAATACTTGGGTGTCTTGGA+TGG - chr7_4:46806168-46806187 None:intergenic 45.0%
CATCCAAGACACCCAAGTAT+TGG + chr7_4:46806166-46806185 Msa1157750:CDS 45.0%
AAGCCAATACTTGGGTGTCT+TGG - chr7_4:46806172-46806191 None:intergenic 45.0%
GTCTCGACTGCCAAAAAAAC+AGG + chr7_4:46806237-46806256 Msa1157750:CDS 45.0%
TGCAAGGTAGCATCTAGTGT+TGG - chr7_4:46807566-46807585 None:intergenic 45.0%
TTGTGGATTTCATCCTCTGC+AGG + chr7_4:46807693-46807712 Msa1157750:intron 45.0%
TACGTGACTACAGAACAGAC+TGG + chr7_4:46807716-46807735 Msa1157750:CDS 45.0%
ACGTGACTACAGAACAGACT+GGG + chr7_4:46807717-46807736 Msa1157750:CDS 45.0%
AATAATTTCCAGCAACGGGC+TGG - chr7_4:46807756-46807775 None:intergenic 45.0%
! TTGGTGGATAGAGCTATAGG+AGG + chr7_4:46808085-46808104 Msa1157750:CDS 45.0%
GAGGATCCAGCTTAGAAGAT+GGG + chr7_4:46808104-46808123 Msa1157750:CDS 45.0%
GATTTGCCCATCTTCTAAGC+TGG - chr7_4:46808113-46808132 None:intergenic 45.0%
!! AAATCGAGTTGATGCTCCAC+AGG + chr7_4:46808128-46808147 Msa1157750:CDS 45.0%
! TGTGGCCCTTTTGGCATATA+TGG + chr7_4:46808269-46808288 Msa1157750:intron 45.0%
!! AACTTGTGGCTTTAGAGCTC+TGG + chr7_4:46808459-46808478 Msa1157750:intron 45.0%
ATCAAGCAGCAACCTCCTAT+TGG - chr7_4:46808516-46808535 None:intergenic 45.0%
!! TGATTCTAGAGGTGTTGCAG+AGG + chr7_4:46808535-46808554 Msa1157750:CDS 45.0%
! CTGTGTTGCTGACAATTGCA+AGG + chr7_4:46808574-46808593 Msa1157750:CDS 45.0%
!! CTCACCGACTTTGAAAAACC+AGG + chr7_4:46808615-46808634 Msa1157750:intron 45.0%
!! CACCGACTTTGAAAAACCAG+GGG + chr7_4:46808617-46808636 Msa1157750:intron 45.0%
!! AGCCCCTGGTTTTTCAAAGT+CGG - chr7_4:46808622-46808641 None:intergenic 45.0%
TAGAATAGACCCTTTGGGTG+AGG + chr7_4:46809130-46809149 Msa1157750:CDS 45.0%
AGAATAGACCCTTTGGGTGA+GGG + chr7_4:46809131-46809150 Msa1157750:CDS 45.0%
! ATTTAGCTCCCTCACCCAAA+GGG - chr7_4:46809142-46809161 None:intergenic 45.0%
!! GCATTGCTTTATTTGTGCGC+GGG + chr7_4:46809555-46809574 Msa1157750:intron 45.0%
CCCTTGATCAAGTTCCTGAA+AGG - chr7_4:46809643-46809662 None:intergenic 45.0%
TCAGGAACTTGATCAAGGGA+CGG + chr7_4:46809644-46809663 Msa1157750:intron 45.0%
ATTGGTCAACAGAGTGAGAG+AGG - chr7_4:46809823-46809842 None:intergenic 45.0%
TGCACAGATCGAAGAAGACA+AGG + chr7_4:46809851-46809870 Msa1157750:intron 45.0%
TCTCTCTGTAGTGACAAGTG+TGG + chr7_4:46809875-46809894 Msa1157750:CDS 45.0%
CGTAGTCTACCTTCTTTCCT+GGG - chr7_4:46809917-46809936 None:intergenic 45.0%
TCGTAGTCTACCTTCTTTCC+TGG - chr7_4:46809918-46809937 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr7_4:46810406-46810425 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr7_4:46810406-46810425 Msa1157750:intron 45.0%
TGAAACACCTCCATTTCCAG+AGG - chr7_4:46810943-46810962 None:intergenic 45.0%
!! CTGGAAATGGAGGTGTTTCA+AGG + chr7_4:46810943-46810962 Msa1157750:CDS 45.0%
!! GGAAATGGAGGTGTTTCAAG+GGG + chr7_4:46810945-46810964 Msa1157750:CDS 45.0%
CAAGGCCTTCATTCAACAAG+TGG - chr7_4:46811084-46811103 None:intergenic 45.0%
! TTTTAACCCTCCGGTTTACG+TGG + chr7_4:46811250-46811269 Msa1157750:three_prime_UTR 45.0%
TTTAACCCTCCGGTTTACGT+GGG + chr7_4:46811251-46811270 Msa1157750:three_prime_UTR 45.0%
TTTACGTGGGAAAAGGGCTA+TGG + chr7_4:46811264-46811283 Msa1157750:three_prime_UTR 45.0%
TTACGTGGGAAAAGGGCTAT+GGG + chr7_4:46811265-46811284 Msa1157750:three_prime_UTR 45.0%
CTATGGGTTCCACCTAAGAA+TGG + chr7_4:46811281-46811300 Msa1157750:three_prime_UTR 45.0%
GGGGGATGAAAAATGACGAG+TGG - chr7_4:46801830-46801849 None:intergenic 50.0%
ACATCACAGGGCATAGTCTC+TGG + chr7_4:46801932-46801951 Msa1157750:CDS 50.0%
CATCACAGGGCATAGTCTCT+GGG + chr7_4:46801933-46801952 Msa1157750:CDS 50.0%
TTTCCATGCCTCTTTCCCTG+AGG + chr7_4:46802383-46802402 Msa1157750:intron 50.0%
ACACTTCTCCTCAGGGAAAG+AGG - chr7_4:46802394-46802413 None:intergenic 50.0%
CGCTGAAAAAAGGCCTGCAT+TGG - chr7_4:46802655-46802674 None:intergenic 50.0%
!!! TGCAGGCCTTTTTTCAGCGA+TGG + chr7_4:46802656-46802675 Msa1157750:intron 50.0%
!!! AGGCCTTTTTTCAGCGATGG+TGG + chr7_4:46802659-46802678 Msa1157750:intron 50.0%
!!! GGCCTTTTTTCAGCGATGGT+GGG + chr7_4:46802660-46802679 Msa1157750:intron 50.0%
ATGCCACCGTTTCTGTGACA+TGG - chr7_4:46802878-46802897 None:intergenic 50.0%
GGTTGGCAAATTGACCCGTT+TGG + chr7_4:46803001-46803020 Msa1157750:CDS 50.0%
GCACAGCAGAATGTCCAAAC+GGG - chr7_4:46803018-46803037 None:intergenic 50.0%
GTTTGGACATTCTGCTGTGC+AGG + chr7_4:46803018-46803037 Msa1157750:CDS 50.0%
GGAATGCACCAGCAAAGATC+TGG - chr7_4:46803401-46803420 None:intergenic 50.0%
ACCTTCACCTACTTGCAGTG+TGG + chr7_4:46803799-46803818 Msa1157750:intron 50.0%
TCCACACTGCAAGTAGGTGA+AGG - chr7_4:46803803-46803822 None:intergenic 50.0%
AGGTATCACCCCCTTTGACT+AGG + chr7_4:46804265-46804284 Msa1157750:intron 50.0%
GGTATCACCCCCTTTGACTA+GGG + chr7_4:46804266-46804285 Msa1157750:intron 50.0%
! CGTGCAAATGGTTTCTGGAC+AGG + chr7_4:46804597-46804616 Msa1157750:CDS 50.0%
! GCGTTTCAAAGCTGGTCTAC+TGG - chr7_4:46804631-46804650 None:intergenic 50.0%
CAACACCATGATGCAGTCAC+CGG + chr7_4:46804856-46804875 Msa1157750:CDS 50.0%
!! TTCGTCATCACTGGCTTGCT+TGG + chr7_4:46805037-46805056 Msa1157750:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr7_4:46805218-46805237 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_4:46805224-46805243 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_4:46805221-46805240 Msa1157750:intron 50.0%
GTTCCAGTGACTGTTCTCCA+TGG + chr7_4:46806968-46806987 Msa1157750:CDS 50.0%
CTACAGAACAGACTGGGACT+TGG + chr7_4:46807723-46807742 Msa1157750:CDS 50.0%
GGAGGATCCAGCTTAGAAGA+TGG + chr7_4:46808103-46808122 Msa1157750:CDS 50.0%
CATTGCCACAAAGGCTAGGT+AGG - chr7_4:46808951-46808970 None:intergenic 50.0%
TGCACATTGCCACAAAGGCT+AGG - chr7_4:46808955-46808974 None:intergenic 50.0%
! CATTTAGCTCCCTCACCCAA+AGG - chr7_4:46809143-46809162 None:intergenic 50.0%
CTTTGGGTGAGGGAGCTAAA+TGG + chr7_4:46809141-46809160 Msa1157750:CDS 50.0%
! GCTAAATGGCGCCGTACTTT+TGG + chr7_4:46809155-46809174 Msa1157750:CDS 50.0%
!! TTGCTTTATTTGTGCGCGGG+TGG + chr7_4:46809558-46809577 Msa1157750:intron 50.0%
TGGAAAGTAGAAGGGTCCTC+TGG + chr7_4:46810924-46810943 Msa1157750:CDS 50.0%
! GTAGAAGGGTCCTCTGGAAA+TGG + chr7_4:46810930-46810949 Msa1157750:CDS 50.0%
!! AATGGAGGTGTTTCAAGGGG+AGG + chr7_4:46810948-46810967 Msa1157750:CDS 50.0%
! AACTGTGGAGCTTGCTCCAA+TGG + chr7_4:46810992-46811011 Msa1157750:CDS 50.0%
! CTTTTCCCACGTAAACCGGA+GGG - chr7_4:46811259-46811278 None:intergenic 50.0%
CTCCGGTTTACGTGGGAAAA+GGG + chr7_4:46811258-46811277 Msa1157750:three_prime_UTR 50.0%
! AGCCCTTTTCCCACGTAAAC+CGG - chr7_4:46811263-46811282 None:intergenic 50.0%
TCTCCTCAGGGAAAGAGGCA+TGG - chr7_4:46802389-46802408 None:intergenic 55.0%
TGGCAAGGTAGCAAGAGCCT+CGG + chr7_4:46803225-46803244 Msa1157750:CDS 55.0%
TCACCTGAGCAGATGAACCG+AGG - chr7_4:46803245-46803264 None:intergenic 55.0%
!!! CACGTGCTGCTTTTCTGTGC+CGG - chr7_4:46804878-46804897 None:intergenic 55.0%
CTCTGTGCAGGCAGAGAAAC+TGG + chr7_4:46805013-46805032 Msa1157750:intron 55.0%
ACAATGCCGACCCCACTTAG+TGG + chr7_4:46805209-46805228 Msa1157750:intron 55.0%
CAATGCCGACCCCACTTAGT+GGG + chr7_4:46805210-46805229 Msa1157750:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr7_4:46805216-46805235 Msa1157750:intron 55.0%
GGTCCATGGAGAACAGTCAC+TGG - chr7_4:46806974-46806993 None:intergenic 55.0%
CTGTAGTCACGTACCTGCAG+AGG - chr7_4:46807709-46807728 None:intergenic 55.0%
! GGAAGCTGACCAAAGCGTCA+AGG + chr7_4:46808783-46808802 Msa1157750:intron 55.0%
GCTTGTCAGCATACTCCCTC+CGG + chr7_4:46810472-46810491 Msa1157750:intron 55.0%
! GAAGGGTCCTCTGGAAATGG+AGG + chr7_4:46810933-46810952 Msa1157750:CDS 55.0%
! CCTTTTCCCACGTAAACCGG+AGG - chr7_4:46811260-46811279 None:intergenic 55.0%
CCTCCGGTTTACGTGGGAAA+AGG + chr7_4:46811257-46811276 Msa1157750:three_prime_UTR 55.0%
GAGCCTCGGTTCATCTGCTC+AGG + chr7_4:46803239-46803258 Msa1157750:CDS 60.0%
! CTGTGCCGGTGACTGCATCA+TGG - chr7_4:46804864-46804883 None:intergenic 60.0%
CGGCACAGAAAAGCAGCACG+TGG + chr7_4:46804876-46804895 Msa1157750:CDS 60.0%
! ATGGCGCCGTACTTTTGGCC+AGG + chr7_4:46809160-46809179 Msa1157750:CDS 60.0%
GAAGTGCACCAGCCCGTTGC+TGG + chr7_4:46807745-46807764 Msa1157750:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 46801602 46811399 46801602 ID=Msa1157750;Name=Msa1157750
chr7_4 mRNA 46801602 46811399 46801602 ID=Msa1157750-mRNA-1;Parent=Msa1157750;Name=Msa1157750-mRNA-1;_AED=0.12;_eAED=0.12;_QI=193|0.93|0.96|0.96|0.93|0.87|32|306|1036
chr7_4 exon 46801602 46801647 46801602 ID=Msa1157750-mRNA-1:exon:12318;Parent=Msa1157750-mRNA-1
chr7_4 exon 46801704 46802051 46801704 ID=Msa1157750-mRNA-1:exon:12319;Parent=Msa1157750-mRNA-1
chr7_4 exon 46802139 46802222 46802139 ID=Msa1157750-mRNA-1:exon:12320;Parent=Msa1157750-mRNA-1
chr7_4 exon 46802661 46802749 46802661 ID=Msa1157750-mRNA-1:exon:12321;Parent=Msa1157750-mRNA-1
chr7_4 exon 46802886 46803060 46802886 ID=Msa1157750-mRNA-1:exon:12322;Parent=Msa1157750-mRNA-1
chr7_4 exon 46803141 46803260 46803141 ID=Msa1157750-mRNA-1:exon:12323;Parent=Msa1157750-mRNA-1
chr7_4 exon 46803402 46803485 46803402 ID=Msa1157750-mRNA-1:exon:12324;Parent=Msa1157750-mRNA-1
chr7_4 exon 46803575 46803646 46803575 ID=Msa1157750-mRNA-1:exon:12325;Parent=Msa1157750-mRNA-1
chr7_4 exon 46803817 46803879 46803817 ID=Msa1157750-mRNA-1:exon:12326;Parent=Msa1157750-mRNA-1
chr7_4 exon 46804153 46804266 46804153 ID=Msa1157750-mRNA-1:exon:12327;Parent=Msa1157750-mRNA-1
chr7_4 exon 46804386 46804486 46804386 ID=Msa1157750-mRNA-1:exon:12328;Parent=Msa1157750-mRNA-1
chr7_4 exon 46804587 46804680 46804587 ID=Msa1157750-mRNA-1:exon:12329;Parent=Msa1157750-mRNA-1
chr7_4 exon 46804772 46804939 46804772 ID=Msa1157750-mRNA-1:exon:12330;Parent=Msa1157750-mRNA-1
chr7_4 exon 46805023 46805112 46805023 ID=Msa1157750-mRNA-1:exon:12331;Parent=Msa1157750-mRNA-1
chr7_4 exon 46805314 46805379 46805314 ID=Msa1157750-mRNA-1:exon:12332;Parent=Msa1157750-mRNA-1
chr7_4 exon 46805490 46805546 46805490 ID=Msa1157750-mRNA-1:exon:12333;Parent=Msa1157750-mRNA-1
chr7_4 exon 46806039 46806258 46806039 ID=Msa1157750-mRNA-1:exon:12334;Parent=Msa1157750-mRNA-1
chr7_4 exon 46806360 46806487 46806360 ID=Msa1157750-mRNA-1:exon:12335;Parent=Msa1157750-mRNA-1
chr7_4 exon 46806660 46806731 46806660 ID=Msa1157750-mRNA-1:exon:12336;Parent=Msa1157750-mRNA-1
chr7_4 exon 46806826 46806885 46806826 ID=Msa1157750-mRNA-1:exon:12337;Parent=Msa1157750-mRNA-1
chr7_4 exon 46806968 46807039 46806968 ID=Msa1157750-mRNA-1:exon:12338;Parent=Msa1157750-mRNA-1
chr7_4 exon 46807148 46807195 46807148 ID=Msa1157750-mRNA-1:exon:12339;Parent=Msa1157750-mRNA-1
chr7_4 exon 46807378 46807497 46807378 ID=Msa1157750-mRNA-1:exon:12340;Parent=Msa1157750-mRNA-1
chr7_4 exon 46807715 46807780 46807715 ID=Msa1157750-mRNA-1:exon:12341;Parent=Msa1157750-mRNA-1
chr7_4 exon 46808037 46808149 46808037 ID=Msa1157750-mRNA-1:exon:12342;Parent=Msa1157750-mRNA-1
chr7_4 exon 46808520 46808604 46808520 ID=Msa1157750-mRNA-1:exon:12343;Parent=Msa1157750-mRNA-1
chr7_4 exon 46809110 46809220 46809110 ID=Msa1157750-mRNA-1:exon:12344;Parent=Msa1157750-mRNA-1
chr7_4 exon 46809312 46809410 46809312 ID=Msa1157750-mRNA-1:exon:12345;Parent=Msa1157750-mRNA-1
chr7_4 exon 46809648 46809695 46809648 ID=Msa1157750-mRNA-1:exon:12346;Parent=Msa1157750-mRNA-1
chr7_4 exon 46809858 46809926 46809858 ID=Msa1157750-mRNA-1:exon:12347;Parent=Msa1157750-mRNA-1
chr7_4 exon 46810852 46811133 46810852 ID=Msa1157750-mRNA-1:exon:12348;Parent=Msa1157750-mRNA-1
chr7_4 exon 46811154 46811399 46811154 ID=Msa1157750-mRNA-1:exon:12349;Parent=Msa1157750-mRNA-1
chr7_4 five_prime_UTR 46801602 46801647 46801602 ID=Msa1157750-mRNA-1:five_prime_utr;Parent=Msa1157750-mRNA-1
chr7_4 five_prime_UTR 46801704 46801850 46801704 ID=Msa1157750-mRNA-1:five_prime_utr;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46801851 46802051 46801851 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46802139 46802222 46802139 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46802661 46802749 46802661 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46802886 46803060 46802886 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46803141 46803260 46803141 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46803402 46803485 46803402 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46803575 46803646 46803575 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46803817 46803879 46803817 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46804153 46804266 46804153 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46804386 46804486 46804386 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46804587 46804680 46804587 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46804772 46804939 46804772 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46805023 46805112 46805023 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46805314 46805379 46805314 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46805490 46805546 46805490 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46806039 46806258 46806039 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46806360 46806487 46806360 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46806660 46806731 46806660 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46806826 46806885 46806826 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46806968 46807039 46806968 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46807148 46807195 46807148 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46807378 46807497 46807378 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46807715 46807780 46807715 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46808037 46808149 46808037 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46808520 46808604 46808520 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46809110 46809220 46809110 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46809312 46809410 46809312 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46809648 46809695 46809648 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46809858 46809926 46809858 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 CDS 46810852 46811073 46810852 ID=Msa1157750-mRNA-1:cds;Parent=Msa1157750-mRNA-1
chr7_4 three_prime_UTR 46811074 46811133 46811074 ID=Msa1157750-mRNA-1:three_prime_utr;Parent=Msa1157750-mRNA-1
chr7_4 three_prime_UTR 46811154 46811399 46811154 ID=Msa1157750-mRNA-1:three_prime_utr;Parent=Msa1157750-mRNA-1
Gene Sequence

>Msa1157750

ATGGAGAAAAAATTGATCTTTTTGGTGACCCTTTTGGGAATTCTCTTTTATGGAGGAGAATCCAAGTTTATAGAGTATAACACATCACAGGGCATAGTCTCTGGGAAGCTCAATGTTCATCTGGTAGCTCATACTCATGATGATGTTGGATGGTTGAAGACTGTTGATCAGTACTATGTTGGTTCCAACAATTCTATTCAGGGGGCTTGTGTGCAAAATGTGTTGGATTCTATGGTTCATGCTCTATTGGCTGATAAGAACAGGAAATTTATCTATGTGGAGATAGCCTTTTTTCAGCGATGGTGGGATGATCAGAGTGAAGCTGTTCAGAATATAGTTAAGCAGCTTGTTAGTTCTGGTCAACTAGAGTTCATAAACGGTGGCATGTGTATGCATGATGAGGCAGTAGTTCATTACATAGACATGATTGATCAGACTACACTTGGACACCGATTTCTGAAAGAGGAGTTCGATTTGACTCCAAGAATTGGTTGGCAAATTGACCCGTTTGGACATTCTGCTGTGCAGGCTTATTTATTGGGAGCTGAAGTTGGCTTTGATTCACTTTTCTTTGGTAGGATCGATTACCAAGATAGGAATAAACGCAAAAAGGAGAAGAGTCTTGAGGTTATCTGGCAAGGTAGCAAGAGCCTCGGTTCATCTGCTCAGATCTTTGCTGGTGCATTCCCTGAGAACTATGAACCTCCTTCTGGATTTTACTTTGAAGTGAATGATGATTCACAAATAGTTCAAGATAACATGAATTTGTTTGATTACAATGTGCAAGATAGAGTGAATGACTTTGTTGCTGCTGCATTATCACAATGTGGATGTACTTACGAATACCTAGTGATATACATTGCACACTGCATAGGATTAACTCTGAAGGCAAACATAACTCGGACAAATCACATTATGTGGACAATGGGAACTGATTTTAAGTATCAATACGCACATACATGGTACCGACAGTTGGACAAGCTCATTCATTACGTGAACAAGGATGGACGTGTCAATGCTCTGTACTCTACACCCTCCATATATACAGATGCAAAATATGCTGCAAATGAGTCATGGCCAATCAAGACTGACGATTTCTTCCCTTATTCAGATCGTGCAAATGGTTTCTGGACAGGATACTTTACCAGTAGACCAGCTTTGAAACGCTATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAGTTAGAATATTTTAGAGGGCGAAAGAACTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGCTCAACACCATGATGCAGTCACCGGCACAGAAAAGCAGCACGTGGCTAATGATTATGCTAAACGATTGGCAATAGGCTACAAGGAGGCAGAGAAACTGGTTTCGTCATCACTGGCTTGCTTGGTTGAATCAACATCGGTTACTGGATGTCATAACCCAGTTACAAAGTTTCAACAATGTCCGCTTTTGAACATAACTTATTGTCCTGCAACAGAAGTTGAACTGGTTCAAGGAAAGAGTTTGGTTATTGTGGTTTATAACTCTCTTGGTTGGAAGAGGAATGAAGTGATTCGAATTCCTGTTATTGATGGTGATGTTACAGTTCATGACTCCAACGGTGTAAAAATAGAATCTCAAATTCTACCTCTGGCTGAGGTATTTGTAGATCTAAGAAACTATTATGTCAAGGCATATTTGGGACAAAATCCATCCAAGACACCCAAGTATTGGCTTGCATTTTCAGTTTCTGTACCACCATTTGGTTTTAGCACTTACACTGTCTCGACTGCCAAAAAAACAGGTTCCACCAGATCATCAGTTTATACACTTCAAAGTCATGAAAAGTCTTCCATAGGTCAAGGAAATTTGAAGCTTACATTTTCTACGGATCAACAAAAACGTACCAATTATGTTAATGCAAGAAACATGGTTGAGGAACAAGTTGAACTGAATTACCTTTACTATTCAGGGTATAACGGAACTGATCAAAAAGATCCACAGAATGCTGGAGCTTATATCTTCCGTCCAAATGGAACACATCTTATAAGTCATGAAAGACAGGTTCCAGTGACTGTTCTCCATGGACCAATACTAGATGAAGTGCATCAACGAATCAATCCATGGATATATCAGATTACCAGACAGTACAAAGAAAAGGAACATGTTGAAGTAGAGTTTATTGTTGGTCCTATACCTATTGAAGATGGAGTTGGTAAAGAAGTTTCCACTCGGATTTCAACTACTATGGAAACCAATAAAACTTTTTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGGTACGTGACTACAGAACAGACTGGGACTTGGAAGTGCACCAGCCCGTTGCTGGAAATTATTACCCAATTAATCTTGGGATATACGTAGAAGATGATAAGACAGAATTCTCAGTTTTGGTGGATAGAGCTATAGGAGGATCCAGCTTAGAAGATGGGCAAATCGAGTTGATGCTCCACAGGAGGTTGCTGCTTGATGATTCTAGAGGTGTTGCAGAGGCGTTAAATGAAACAGACTGTGTTGCTGACAATTGCAAGGGTCTAACTGTCCAAGGGAAATATTATTATAGAATAGACCCTTTGGGTGAGGGAGCTAAATGGCGCCGTACTTTTGGCCAGGAAATATATTCTCCACTTTTGTTAGCCTTTTCCGAAAAGGATGATAAAGATGACTGGATGAATACCCATGTAACAACATTTTCAGGATTTGATTCTTCTTACACATTACCAGAAAACATTGTTATTATAACATTACAGGAACTTGATCAAGGGACGGTTCTCCTTCGATTAGCGCATTTATACGAGATCGAAGAAGACAAGGATCTCTCTGTAGTGACAAGTGTGGAGTTGAAAAAGCTTTTCCCAGGAAAGAAGATCAAAGAAGTGAGGGAAATGAGCTTATCTGCAAATCAAGAAAGGACAGAGATGGAGAAGAAAAGACTTGTTTGGAAAGTAGAAGGGTCCTCTGGAAATGGAGGTGTTTCAAGGGGAGGTCCAGTTGATCCAAAAGAGTTAACTGTGGAGCTTGCTCCAATGGAAATCCGCACTTTTACCATTTACTTTGACAGTAGTAACCATCTTTTTGATGCTTTGTAG
Protein sequence

>Msa1157750

MEKKLIFLVTLLGILFYGGESKFIEYNTSQGIVSGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSMVHALLADKNRKFIYVEIAFFQRWWDDQSEAVQNIVKQLVSSGQLEFINGGMCMHDEAVVHYIDMIDQTTLGHRFLKEEFDLTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRNKRKKEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPSGFYFEVNDDSQIVQDNMNLFDYNVQDRVNDFVAAALSQCGCTYEYLVIYIAHCIGLTLKANITRTNHIMWTMGTDFKYQYAHTWYRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYAANESWPIKTDDFFPYSDRANGFWTGYFTSRPALKRYVRLMSGYYLAARQLEYFRGRKNSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYKEAEKLVSSSLACLVESTSVTGCHNPVTKFQQCPLLNITYCPATEVELVQGKSLVIVVYNSLGWKRNEVIRIPVIDGDVTVHDSNGVKIESQILPLAEVFVDLRNYYVKAYLGQNPSKTPKYWLAFSVSVPPFGFSTYTVSTAKKTGSTRSSVYTLQSHEKSSIGQGNLKLTFSTDQQKRTNYVNARNMVEEQVELNYLYYSGYNGTDQKDPQNAGAYIFRPNGTHLISHERQVPVTVLHGPILDEVHQRINPWIYQITRQYKEKEHVEVEFIVGPIPIEDGVGKEVSTRISTTMETNKTFYTDSNGRDFIKRVRDYRTDWDLEVHQPVAGNYYPINLGIYVEDDKTEFSVLVDRAIGGSSLEDGQIELMLHRRLLLDDSRGVAEALNETDCVADNCKGLTVQGKYYYRIDPLGEGAKWRRTFGQEIYSPLLLAFSEKDDKDDWMNTHVTTFSGFDSSYTLPENIVIITLQELDQGTVLLRLAHLYEIEEDKDLSVVTSVELKKLFPGKKIKEVREMSLSANQERTEMEKKRLVWKVEGSSGNGGVSRGGPVDPKELTVELAPMEIRTFTIYFDSSNHLFDAL*