Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172060 | RHN63526.1 | 87.261 | 471 | 20 | 3 | 1 | 467 | 10 | 444 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172060 | sp|Q55BF2|NMD3_DICDI | 42.981 | 463 | 232 | 10 | 21 | 465 | 10 | 458 | 1.06e-132 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0127910 | Msa1172060 | -0.808039 | 3.766915e-50 | -8.615850e-47 |
| Msa0168770 | Msa1172060 | -0.805980 | 1.026982e-49 | -8.615850e-47 |
| Msa0174060 | Msa1172060 | -0.802415 | 5.670396e-49 | -8.615850e-47 |
| Msa0229410 | Msa1172060 | 0.981903 | 9.761698e-154 | -8.615850e-47 |
| Msa0390590 | Msa1172060 | -0.808710 | 2.709995e-50 | -8.615850e-47 |
| Msa1039440 | Msa1172060 | -0.813647 | 2.302183e-51 | -8.615850e-47 |
| Msa0334450 | Msa1172060 | -0.808852 | 2.525940e-50 | -8.615850e-47 |
| Msa1172060 | Msa1213470 | -0.805826 | 1.106625e-49 | -8.615850e-47 |
| Msa1172060 | Msa1300370 | -0.806650 | 7.419829e-50 | -8.615850e-47 |
| Msa1172060 | Msa1352600 | -0.807605 | 4.657865e-50 | -8.615850e-47 |
| Msa1172060 | Msa1361670 | -0.800655 | 1.301880e-48 | -8.615850e-47 |
| Msa1172060 | Msa1363280 | -0.800023 | 1.750685e-48 | -8.615850e-47 |
| Msa0523420 | Msa1172060 | -0.817669 | 2.925521e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172060 | MtrunA17_Chr4g0059211 | 87.261 | 471 | 20 | 3 | 1 | 467 | 10 | 444 | 0.0 | 841 |
| Msa1172060 | MtrunA17_Chr5g0443481 | 54.545 | 462 | 192 | 6 | 19 | 472 | 14 | 465 | 5.37e-165 | 474 |
| Msa1172060 | MtrunA17_Chr3g0109991 | 84.000 | 200 | 32 | 0 | 7 | 206 | 1 | 200 | 2.76e-125 | 365 |
| Msa1172060 | MtrunA17_Chr5g0442961 | 38.462 | 312 | 158 | 7 | 164 | 454 | 5 | 303 | 2.82e-50 | 174 |
| Msa1172060 | MtrunA17_Chr5g0442421 | 39.865 | 296 | 152 | 10 | 165 | 454 | 16 | 291 | 2.56e-48 | 169 |
| Msa1172060 | MtrunA17_Chr5g0396211 | 38.264 | 311 | 143 | 10 | 164 | 454 | 5 | 286 | 1.54e-45 | 161 |
| Msa1172060 | MtrunA17_Chr5g0395031 | 36.875 | 320 | 144 | 9 | 164 | 454 | 5 | 295 | 9.69e-45 | 159 |
| Msa1172060 | MtrunA17_Chr5g0398611 | 35.604 | 323 | 152 | 10 | 164 | 451 | 8 | 309 | 1.57e-42 | 154 |
| Msa1172060 | MtrunA17_Chr5g0443981 | 46.703 | 182 | 81 | 3 | 250 | 417 | 8 | 187 | 2.49e-39 | 143 |
| Msa1172060 | MtrunA17_Chr5g0443171 | 38.889 | 270 | 119 | 8 | 166 | 417 | 9 | 250 | 3.94e-39 | 144 |
| Msa1172060 | MtrunA17_Chr5g0442101 | 40.336 | 238 | 122 | 5 | 214 | 451 | 18 | 235 | 1.55e-38 | 141 |
| Msa1172060 | MtrunA17_Chr5g0441891 | 35.542 | 166 | 85 | 3 | 306 | 454 | 50 | 210 | 3.02e-19 | 87.0 |
| Msa1172060 | MtrunA17_Chr4g0034421 | 33.824 | 204 | 94 | 5 | 252 | 454 | 9 | 172 | 6.23e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172060 | AT2G03820.1 | 58.873 | 479 | 167 | 10 | 10 | 471 | 6 | 471 | 0.0 | 566 |
Find 104 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATCAACTCCTCCAATTC+AGG | 0.234477 | 8_1:-1947410 | None:intergenic |
| GGAACGTGATCAATTCTTAA+AGG | 0.234838 | 8_1:+1947385 | Msa1172060:CDS |
| TACATAGCTTTGGGAAATAT+TGG | 0.252016 | 8_1:+1946873 | Msa1172060:CDS |
| TGCTCAAGTTGCTCGAGTTT+TGG | 0.255945 | 8_1:+1947121 | Msa1172060:CDS |
| TGGTAAATGCAGAATTTATT+TGG | 0.256762 | 8_1:+1946370 | Msa1172060:CDS |
| CTTACCATGTCAGGTTTATC+AGG | 0.270325 | 8_1:+1946051 | None:intergenic |
| CCCAAAGCTATGTAAGCTTT+AGG | 0.296946 | 8_1:-1946864 | None:intergenic |
| TTATCATTACGACTCTTAAT+AGG | 0.312963 | 8_1:-1946738 | None:intergenic |
| TTCTTTATTAAAATCACTTC+AGG | 0.335878 | 8_1:-1947284 | None:intergenic |
| TCCTAAAGCTTACATAGCTT+TGG | 0.338275 | 8_1:+1946863 | Msa1172060:CDS |
| GTTCAGAAGGAGGTTTATAA+TGG | 0.347373 | 8_1:+1946432 | Msa1172060:CDS |
| ATTCTTAAAGGACCCTGAAT+TGG | 0.356998 | 8_1:+1947397 | Msa1172060:CDS |
| AATTAAATCCTCGCGACAAA+TGG | 0.363763 | 8_1:-1946832 | None:intergenic |
| CAGACACTTCAGACACATAT+TGG | 0.363886 | 8_1:-1946166 | None:intergenic |
| CTCTTGGTTATGACCTGTAT+AGG | 0.365703 | 8_1:+1947216 | Msa1172060:CDS |
| ACTTACTAGCAGAGAGTTAG+TGG | 0.368478 | 8_1:+1947010 | Msa1172060:CDS |
| TTTATCTCCCTTACCATGTC+AGG | 0.377835 | 8_1:+1946042 | None:intergenic |
| TGGTCCATCTGAGATTACTA+TGG | 0.385953 | 8_1:+1947073 | Msa1172060:CDS |
| TCCTATGGAGATTGATGATA+AGG | 0.388205 | 8_1:+1947343 | Msa1172060:CDS |
| CCTAAAGCTTACATAGCTTT+GGG | 0.388692 | 8_1:+1946864 | Msa1172060:CDS |
| TGAATCCCTTGATCTGTTTG+AGG | 0.388839 | 8_1:+1947439 | Msa1172060:CDS |
| GATGTGGGAAGCCTCGTTCT+TGG | 0.390234 | 8_1:+1947312 | Msa1172060:CDS |
| CCTTGTTGAGTACGTTCAAC+AGG | 0.393536 | 8_1:+1946476 | Msa1172060:CDS |
| ATTAAATCCTCGCGACAAAT+GGG | 0.395990 | 8_1:-1946831 | None:intergenic |
| CCCTGAATTGGAGGAGTTGA+TGG | 0.406602 | 8_1:+1947409 | Msa1172060:CDS |
| AGACACATATTGGTTGTGTT+TGG | 0.408070 | 8_1:-1946156 | None:intergenic |
| TTCTTGGAAATCACTTCCTA+TGG | 0.410620 | 8_1:+1947328 | Msa1172060:CDS |
| ACTTGCAGCCACCGAGAACT+TGG | 0.412238 | 8_1:+1946262 | Msa1172060:CDS |
| ACAACTGCAACCCACTGATC+AGG | 0.417342 | 8_1:-1946537 | None:intergenic |
| ATCTAAGAAACTGTACTTCA+AGG | 0.423477 | 8_1:-1946952 | None:intergenic |
| TTCACTATTTATCAAACAAT+CGG | 0.423711 | 8_1:+1946096 | Msa1172060:CDS |
| TCTTGGTTATGACCTGTATA+GGG | 0.432161 | 8_1:+1947217 | Msa1172060:CDS |
| TCGGTGGCTGCAAGTAGCTT+TGG | 0.434736 | 8_1:-1946254 | None:intergenic |
| CTTCATCCTCAAACAGATCA+AGG | 0.439568 | 8_1:-1947445 | None:intergenic |
| GGAATATATAGTGTTGGATC+TGG | 0.443227 | 8_1:+1947031 | Msa1172060:CDS |
| GCTAGTAAGTAAGGATTTGA+AGG | 0.443338 | 8_1:-1946997 | None:intergenic |
| TCTTAGATGCTGATCAGTAT+TGG | 0.445513 | 8_1:+1946967 | Msa1172060:CDS |
| TAACTCTCTGCTAGTAAGTA+AGG | 0.447479 | 8_1:-1947006 | None:intergenic |
| ACATGTGTGAATCATGTTCC+AGG | 0.458655 | 8_1:+1946502 | Msa1172060:CDS |
| AAGCCTGGTGACCATGCTCT+TGG | 0.462066 | 8_1:+1947200 | Msa1172060:CDS |
| AGCTGTCAGAATCAAACAAA+TGG | 0.463377 | 8_1:+1946641 | Msa1172060:CDS |
| CTTAAAGGACCCTGAATTGG+AGG | 0.464001 | 8_1:+1947400 | Msa1172060:CDS |
| CTGCAAGTAGCTTTGGCACA+CGG | 0.464118 | 8_1:-1946247 | None:intergenic |
| TGAAGATGAGGAGGATAACA+TGG | 0.467885 | 8_1:+1947463 | Msa1172060:CDS |
| TGTAGTCTGACCCAAGTTCT+CGG | 0.487384 | 8_1:-1946273 | None:intergenic |
| CATTACTGTTAGCCCTATAC+AGG | 0.490027 | 8_1:-1947229 | None:intergenic |
| AAACTGTACTTCAAGGTAAG+TGG | 0.497823 | 8_1:-1946945 | None:intergenic |
| GGGTTGCAGTTGTGCAACTC+AGG | 0.502047 | 8_1:+1946547 | Msa1172060:CDS |
| CCATCAACTCCTCCAATTCA+GGG | 0.502743 | 8_1:-1947409 | None:intergenic |
| ACCTTGGTGCAAATCACAAT+AGG | 0.504166 | 8_1:-1946897 | None:intergenic |
| TAATAAAGAAGAAGAGATGT+GGG | 0.504765 | 8_1:+1947297 | Msa1172060:CDS |
| TGCAAGTAGCTTTGGCACAC+GGG | 0.512112 | 8_1:-1946246 | None:intergenic |
| AGAATCAAACAAATGGATCA+TGG | 0.514811 | 8_1:+1946648 | Msa1172060:CDS |
| TGAATCATGTTCCAGGGTGC+AGG | 0.515850 | 8_1:+1946509 | Msa1172060:CDS |
| AGCAATGCTGTTAGTAACCT+TGG | 0.515955 | 8_1:-1946913 | None:intergenic |
| GAATTGGAGGAGTTGATGGC+TGG | 0.520156 | 8_1:+1947413 | Msa1172060:CDS |
| GAGGCTGTTTCATCTAAAGT+TGG | 0.520425 | 8_1:+1947053 | Msa1172060:CDS |
| AGTCAAAGTCAGTGTTCAGA+AGG | 0.524406 | 8_1:+1946419 | Msa1172060:CDS |
| CAAAGTCAGTGTTCAGAAGG+AGG | 0.524866 | 8_1:+1946422 | Msa1172060:CDS |
| TAACCAAGAGCATGGTCACC+AGG | 0.533294 | 8_1:-1947203 | None:intergenic |
| GAATGTCAATAAAGTGATGC+TGG | 0.539343 | 8_1:+1946350 | Msa1172060:CDS |
| ATGGAGATTGATGATAAGGT+TGG | 0.544248 | 8_1:+1947347 | Msa1172060:CDS |
| ATTAGAAACAAAGGAGCTGT+TGG | 0.544271 | 8_1:+1946296 | Msa1172060:CDS |
| AAATGCAGAATTTATTTGGA+CGG | 0.551243 | 8_1:+1946374 | Msa1172060:CDS |
| GCAGGCTAACCCTGATCAGT+GGG | 0.552421 | 8_1:+1946527 | Msa1172060:CDS |
| GTTAGTGGAATATATAGTGT+TGG | 0.553313 | 8_1:+1947025 | Msa1172060:CDS |
| CATGTCAGGTTTATCAGGCA+TGG | 0.555533 | 8_1:+1946056 | None:intergenic |
| TAGATGCTGATCAGTATTGG+AGG | 0.561272 | 8_1:+1946970 | Msa1172060:CDS |
| GGTTGGAGTTGATTACAACT+TGG | 0.561543 | 8_1:+1947364 | Msa1172060:CDS |
| TCCTATTGTGATTTGCACCA+AGG | 0.561646 | 8_1:+1946896 | Msa1172060:CDS |
| TTAATAAAGAAGAAGAGATG+TGG | 0.569687 | 8_1:+1947296 | Msa1172060:CDS |
| ACTCAACAAGGTAAGACTGT+TGG | 0.572997 | 8_1:-1946464 | None:intergenic |
| CCTGTTGAACGTACTCAACA+AGG | 0.574739 | 8_1:-1946476 | None:intergenic |
| CGGGGCAATGCACGAGCACG+TGG | 0.577187 | 8_1:-1946227 | None:intergenic |
| CAACTGCAACCCACTGATCA+GGG | 0.578615 | 8_1:-1946536 | None:intergenic |
| TGCAGGCTAACCCTGATCAG+TGG | 0.581561 | 8_1:+1946526 | Msa1172060:CDS |
| GGTCCATCTGAGATTACTAT+GGG | 0.584432 | 8_1:+1947074 | Msa1172060:CDS |
| GCAGAAGTTGATATTACAGA+AGG | 0.588364 | 8_1:+1946192 | Msa1172060:CDS |
| CCACCCATAGTAATCTCAGA+TGG | 0.590820 | 8_1:-1947077 | None:intergenic |
| TTCATCCTCAAACAGATCAA+GGG | 0.607113 | 8_1:-1947444 | None:intergenic |
| TCTGTTTGAGGATGAAGATG+AGG | 0.610516 | 8_1:+1947451 | Msa1172060:CDS |
| GTTTGAGGATGAAGATGAGG+AGG | 0.612046 | 8_1:+1947454 | Msa1172060:CDS |
| CTTGCAGCCACCGAGAACTT+GGG | 0.612111 | 8_1:+1946263 | Msa1172060:CDS |
| TTTCTATTAGAACTCATTTG+GGG | 0.613658 | 8_1:+1947168 | Msa1172060:CDS |
| CAGACTACAATTAGAAACAA+AGG | 0.614245 | 8_1:+1946287 | Msa1172060:CDS |
| GCAAGTAGCTTTGGCACACG+GGG | 0.617238 | 8_1:-1946245 | None:intergenic |
| TCAGGCAACATGTCTCGCAC+AGG | 0.620504 | 8_1:+1946565 | Msa1172060:CDS |
| TTAAATCCTCGCGACAAATG+GGG | 0.624671 | 8_1:-1946830 | None:intergenic |
| ACCTTATCATCAATCTCCAT+AGG | 0.628583 | 8_1:-1947344 | None:intergenic |
| GACGGAGCCCCATTCCAAGA+GGG | 0.629548 | 8_1:+1946392 | Msa1172060:CDS |
| GAGCAGCTAATTCTGAAGCA+TGG | 0.629749 | 8_1:+1946606 | Msa1172060:CDS |
| TATTTCTCTAAACGAAGTCA+CGG | 0.633975 | 8_1:+1946681 | Msa1172060:CDS |
| CCATCTGAGATTACTATGGG+TGG | 0.634830 | 8_1:+1947077 | Msa1172060:CDS |
| CATGCCTGATAAACCTGACA+TGG | 0.635117 | 8_1:-1946055 | None:intergenic |
| ACAGGTCATAACCAAGAGCA+TGG | 0.640269 | 8_1:-1947211 | None:intergenic |
| AATCAGCCCCATTTGTCGCG+AGG | 0.643382 | 8_1:+1946824 | Msa1172060:CDS |
| ATATATAGTGTTGGATCTGG+AGG | 0.644394 | 8_1:+1947034 | Msa1172060:CDS |
| AGATGCTGATCAGTATTGGA+GGG | 0.645940 | 8_1:+1946971 | Msa1172060:CDS |
| ATCAGGGTTAGCCTGCACCC+TGG | 0.646953 | 8_1:-1946520 | None:intergenic |
| GGAAGTGATTTCCAAGAACG+AGG | 0.668709 | 8_1:-1947323 | None:intergenic |
| GCTGAATATGACAAGTACAA+AGG | 0.669807 | 8_1:+1947254 | Msa1172060:CDS |
| GGACGGAGCCCCATTCCAAG+AGG | 0.670484 | 8_1:+1946391 | Msa1172060:CDS |
| CATGTGTGAATCATGTTCCA+GGG | 0.675490 | 8_1:+1946503 | Msa1172060:CDS |
| AGTCTGACCCAAGTTCTCGG+TGG | 0.743468 | 8_1:-1946270 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCACTATTTATCAAACAAT+CGG | + | chr8_1:1946096-1946115 | Msa1172060:CDS | 20.0% |
| !!! | AACAACTTTTTGGAATTTAT+TGG | + | chr8_1:1946705-1946724 | Msa1172060:CDS | 20.0% |
| !!! | TTTTCTATTAGAACTCATTT+GGG | + | chr8_1:1947167-1947186 | Msa1172060:CDS | 20.0% |
| !! | TTCTTTATTAAAATCACTTC+AGG | - | chr8_1:1947287-1947306 | None:intergenic | 20.0% |
| !! | TTCACTATTTATCAAACAAT+CGG | + | chr8_1:1946096-1946115 | Msa1172060:CDS | 20.0% |
| !!! | AACAACTTTTTGGAATTTAT+TGG | + | chr8_1:1946705-1946724 | Msa1172060:CDS | 20.0% |
| !!! | TTTTCTATTAGAACTCATTT+GGG | + | chr8_1:1947167-1947186 | Msa1172060:CDS | 20.0% |
| !! | TTCTTTATTAAAATCACTTC+AGG | - | chr8_1:1947287-1947306 | None:intergenic | 20.0% |
| ! | TGGTAAATGCAGAATTTATT+TGG | + | chr8_1:1946370-1946389 | Msa1172060:CDS | 25.0% |
| ! | AAATGCAGAATTTATTTGGA+CGG | + | chr8_1:1946374-1946393 | Msa1172060:CDS | 25.0% |
| ! | TTATCATTACGACTCTTAAT+AGG | - | chr8_1:1946741-1946760 | None:intergenic | 25.0% |
| !! | CTTTTCTATTAGAACTCATT+TGG | + | chr8_1:1947166-1947185 | Msa1172060:CDS | 25.0% |
| ! | TTTCTATTAGAACTCATTTG+GGG | + | chr8_1:1947168-1947187 | Msa1172060:CDS | 25.0% |
| ! | TTAATAAAGAAGAAGAGATG+TGG | + | chr8_1:1947296-1947315 | Msa1172060:CDS | 25.0% |
| ! | TAATAAAGAAGAAGAGATGT+GGG | + | chr8_1:1947297-1947316 | Msa1172060:CDS | 25.0% |
| ! | TGGTAAATGCAGAATTTATT+TGG | + | chr8_1:1946370-1946389 | Msa1172060:CDS | 25.0% |
| ! | AAATGCAGAATTTATTTGGA+CGG | + | chr8_1:1946374-1946393 | Msa1172060:CDS | 25.0% |
| ! | TTATCATTACGACTCTTAAT+AGG | - | chr8_1:1946741-1946760 | None:intergenic | 25.0% |
| !! | CTTTTCTATTAGAACTCATT+TGG | + | chr8_1:1947166-1947185 | Msa1172060:CDS | 25.0% |
| ! | TTTCTATTAGAACTCATTTG+GGG | + | chr8_1:1947168-1947187 | Msa1172060:CDS | 25.0% |
| ! | TTAATAAAGAAGAAGAGATG+TGG | + | chr8_1:1947296-1947315 | Msa1172060:CDS | 25.0% |
| ! | TAATAAAGAAGAAGAGATGT+GGG | + | chr8_1:1947297-1947316 | Msa1172060:CDS | 25.0% |
| CAGACTACAATTAGAAACAA+AGG | + | chr8_1:1946287-1946306 | Msa1172060:CDS | 30.0% | |
| AGAATCAAACAAATGGATCA+TGG | + | chr8_1:1946648-1946667 | Msa1172060:CDS | 30.0% | |
| TATTTCTCTAAACGAAGTCA+CGG | + | chr8_1:1946681-1946700 | Msa1172060:CDS | 30.0% | |
| !! | TACATAGCTTTGGGAAATAT+TGG | + | chr8_1:1946873-1946892 | Msa1172060:CDS | 30.0% |
| ATCTAAGAAACTGTACTTCA+AGG | - | chr8_1:1946955-1946974 | None:intergenic | 30.0% | |
| GTTAGTGGAATATATAGTGT+TGG | + | chr8_1:1947025-1947044 | Msa1172060:CDS | 30.0% | |
| CAGACTACAATTAGAAACAA+AGG | + | chr8_1:1946287-1946306 | Msa1172060:CDS | 30.0% | |
| AGAATCAAACAAATGGATCA+TGG | + | chr8_1:1946648-1946667 | Msa1172060:CDS | 30.0% | |
| TATTTCTCTAAACGAAGTCA+CGG | + | chr8_1:1946681-1946700 | Msa1172060:CDS | 30.0% | |
| !! | TACATAGCTTTGGGAAATAT+TGG | + | chr8_1:1946873-1946892 | Msa1172060:CDS | 30.0% |
| ATCTAAGAAACTGTACTTCA+AGG | - | chr8_1:1946955-1946974 | None:intergenic | 30.0% | |
| GTTAGTGGAATATATAGTGT+TGG | + | chr8_1:1947025-1947044 | Msa1172060:CDS | 30.0% | |
| ! | AGACACATATTGGTTGTGTT+TGG | - | chr8_1:1946159-1946178 | None:intergenic | 35.0% |
| !! | GCAGAAGTTGATATTACAGA+AGG | + | chr8_1:1946192-1946211 | Msa1172060:CDS | 35.0% |
| ATTAGAAACAAAGGAGCTGT+TGG | + | chr8_1:1946296-1946315 | Msa1172060:CDS | 35.0% | |
| GAATGTCAATAAAGTGATGC+TGG | + | chr8_1:1946350-1946369 | Msa1172060:CDS | 35.0% | |
| GTTCAGAAGGAGGTTTATAA+TGG | + | chr8_1:1946432-1946451 | Msa1172060:CDS | 35.0% | |
| ! | CAGGCGTACTTTCTTTTATT+TGG | + | chr8_1:1946584-1946603 | Msa1172060:CDS | 35.0% |
| AGCTGTCAGAATCAAACAAA+TGG | + | chr8_1:1946641-1946660 | Msa1172060:CDS | 35.0% | |
| ! | AAGTCACGGTAACAACTTTT+TGG | + | chr8_1:1946695-1946714 | Msa1172060:CDS | 35.0% |
| ATTAAATCCTCGCGACAAAT+GGG | - | chr8_1:1946834-1946853 | None:intergenic | 35.0% | |
| AATTAAATCCTCGCGACAAA+TGG | - | chr8_1:1946835-1946854 | None:intergenic | 35.0% | |
| TCCTAAAGCTTACATAGCTT+TGG | + | chr8_1:1946863-1946882 | Msa1172060:CDS | 35.0% | |
| CCTAAAGCTTACATAGCTTT+GGG | + | chr8_1:1946864-1946883 | Msa1172060:CDS | 35.0% | |
| AAACTGTACTTCAAGGTAAG+TGG | - | chr8_1:1946948-1946967 | None:intergenic | 35.0% | |
| TCTTAGATGCTGATCAGTAT+TGG | + | chr8_1:1946967-1946986 | Msa1172060:CDS | 35.0% | |
| GCTAGTAAGTAAGGATTTGA+AGG | - | chr8_1:1947000-1947019 | None:intergenic | 35.0% | |
| TAACTCTCTGCTAGTAAGTA+AGG | - | chr8_1:1947009-1947028 | None:intergenic | 35.0% | |
| ! | GGAATATATAGTGTTGGATC+TGG | + | chr8_1:1947031-1947050 | Msa1172060:CDS | 35.0% |
| ! | ATATATAGTGTTGGATCTGG+AGG | + | chr8_1:1947034-1947053 | Msa1172060:CDS | 35.0% |
| TCTTGGTTATGACCTGTATA+GGG | + | chr8_1:1947217-1947236 | Msa1172060:CDS | 35.0% | |
| GCTGAATATGACAAGTACAA+AGG | + | chr8_1:1947254-1947273 | Msa1172060:CDS | 35.0% | |
| TTCTTGGAAATCACTTCCTA+TGG | + | chr8_1:1947328-1947347 | Msa1172060:CDS | 35.0% | |
| ! | TCCTATGGAGATTGATGATA+AGG | + | chr8_1:1947343-1947362 | Msa1172060:CDS | 35.0% |
| ACCTTATCATCAATCTCCAT+AGG | - | chr8_1:1947347-1947366 | None:intergenic | 35.0% | |
| ! | ATGGAGATTGATGATAAGGT+TGG | + | chr8_1:1947347-1947366 | Msa1172060:CDS | 35.0% |
| GGAACGTGATCAATTCTTAA+AGG | + | chr8_1:1947385-1947404 | Msa1172060:CDS | 35.0% | |
| ATTCTTAAAGGACCCTGAAT+TGG | + | chr8_1:1947397-1947416 | Msa1172060:CDS | 35.0% | |
| TTCATCCTCAAACAGATCAA+GGG | - | chr8_1:1947447-1947466 | None:intergenic | 35.0% | |
| ! | AGACACATATTGGTTGTGTT+TGG | - | chr8_1:1946159-1946178 | None:intergenic | 35.0% |
| !! | GCAGAAGTTGATATTACAGA+AGG | + | chr8_1:1946192-1946211 | Msa1172060:CDS | 35.0% |
| ATTAGAAACAAAGGAGCTGT+TGG | + | chr8_1:1946296-1946315 | Msa1172060:CDS | 35.0% | |
| GAATGTCAATAAAGTGATGC+TGG | + | chr8_1:1946350-1946369 | Msa1172060:CDS | 35.0% | |
| GTTCAGAAGGAGGTTTATAA+TGG | + | chr8_1:1946432-1946451 | Msa1172060:CDS | 35.0% | |
| ! | CAGGCGTACTTTCTTTTATT+TGG | + | chr8_1:1946584-1946603 | Msa1172060:CDS | 35.0% |
| AGCTGTCAGAATCAAACAAA+TGG | + | chr8_1:1946641-1946660 | Msa1172060:CDS | 35.0% | |
| ! | AAGTCACGGTAACAACTTTT+TGG | + | chr8_1:1946695-1946714 | Msa1172060:CDS | 35.0% |
| ATTAAATCCTCGCGACAAAT+GGG | - | chr8_1:1946834-1946853 | None:intergenic | 35.0% | |
| AATTAAATCCTCGCGACAAA+TGG | - | chr8_1:1946835-1946854 | None:intergenic | 35.0% | |
| TCCTAAAGCTTACATAGCTT+TGG | + | chr8_1:1946863-1946882 | Msa1172060:CDS | 35.0% | |
| CCTAAAGCTTACATAGCTTT+GGG | + | chr8_1:1946864-1946883 | Msa1172060:CDS | 35.0% | |
| AAACTGTACTTCAAGGTAAG+TGG | - | chr8_1:1946948-1946967 | None:intergenic | 35.0% | |
| TCTTAGATGCTGATCAGTAT+TGG | + | chr8_1:1946967-1946986 | Msa1172060:CDS | 35.0% | |
| GCTAGTAAGTAAGGATTTGA+AGG | - | chr8_1:1947000-1947019 | None:intergenic | 35.0% | |
| TAACTCTCTGCTAGTAAGTA+AGG | - | chr8_1:1947009-1947028 | None:intergenic | 35.0% | |
| ! | GGAATATATAGTGTTGGATC+TGG | + | chr8_1:1947031-1947050 | Msa1172060:CDS | 35.0% |
| ! | ATATATAGTGTTGGATCTGG+AGG | + | chr8_1:1947034-1947053 | Msa1172060:CDS | 35.0% |
| TCTTGGTTATGACCTGTATA+GGG | + | chr8_1:1947217-1947236 | Msa1172060:CDS | 35.0% | |
| GCTGAATATGACAAGTACAA+AGG | + | chr8_1:1947254-1947273 | Msa1172060:CDS | 35.0% | |
| TTCTTGGAAATCACTTCCTA+TGG | + | chr8_1:1947328-1947347 | Msa1172060:CDS | 35.0% | |
| ! | TCCTATGGAGATTGATGATA+AGG | + | chr8_1:1947343-1947362 | Msa1172060:CDS | 35.0% |
| ACCTTATCATCAATCTCCAT+AGG | - | chr8_1:1947347-1947366 | None:intergenic | 35.0% | |
| ! | ATGGAGATTGATGATAAGGT+TGG | + | chr8_1:1947347-1947366 | Msa1172060:CDS | 35.0% |
| GGAACGTGATCAATTCTTAA+AGG | + | chr8_1:1947385-1947404 | Msa1172060:CDS | 35.0% | |
| ATTCTTAAAGGACCCTGAAT+TGG | + | chr8_1:1947397-1947416 | Msa1172060:CDS | 35.0% | |
| TTCATCCTCAAACAGATCAA+GGG | - | chr8_1:1947447-1947466 | None:intergenic | 35.0% | |
| ! | AACGTTTTGTGCTGCAAATG+TGG | + | chr8_1:1946120-1946139 | Msa1172060:CDS | 40.0% |
| ! | ACGTTTTGTGCTGCAAATGT+GGG | + | chr8_1:1946121-1946140 | Msa1172060:CDS | 40.0% |
| CAGACACTTCAGACACATAT+TGG | - | chr8_1:1946169-1946188 | None:intergenic | 40.0% | |
| ! | ACTTTTACCCTCTTGGAATG+GGG | - | chr8_1:1946402-1946421 | None:intergenic | 40.0% |
| ! | GACTTTTACCCTCTTGGAAT+GGG | - | chr8_1:1946403-1946422 | None:intergenic | 40.0% |
| ! | TGACTTTTACCCTCTTGGAA+TGG | - | chr8_1:1946404-1946423 | None:intergenic | 40.0% |
| !! | GACTTTGACTTTTACCCTCT+TGG | - | chr8_1:1946409-1946428 | None:intergenic | 40.0% |
| AGTCAAAGTCAGTGTTCAGA+AGG | + | chr8_1:1946419-1946438 | Msa1172060:CDS | 40.0% | |
| ACTCAACAAGGTAAGACTGT+TGG | - | chr8_1:1946467-1946486 | None:intergenic | 40.0% | |
| ACATGTGTGAATCATGTTCC+AGG | + | chr8_1:1946502-1946521 | Msa1172060:CDS | 40.0% | |
| CATGTGTGAATCATGTTCCA+GGG | + | chr8_1:1946503-1946522 | Msa1172060:CDS | 40.0% | |
| TTAAATCCTCGCGACAAATG+GGG | - | chr8_1:1946833-1946852 | None:intergenic | 40.0% | |
| CCCAAAGCTATGTAAGCTTT+AGG | - | chr8_1:1946867-1946886 | None:intergenic | 40.0% | |
| ! | TCCTATTGTGATTTGCACCA+AGG | + | chr8_1:1946896-1946915 | Msa1172060:CDS | 40.0% |
| ! | ACCTTGGTGCAAATCACAAT+AGG | - | chr8_1:1946900-1946919 | None:intergenic | 40.0% |
| AGCAATGCTGTTAGTAACCT+TGG | - | chr8_1:1946916-1946935 | None:intergenic | 40.0% | |
| ! | TAGATGCTGATCAGTATTGG+AGG | + | chr8_1:1946970-1946989 | Msa1172060:CDS | 40.0% |
| ! | AGATGCTGATCAGTATTGGA+GGG | + | chr8_1:1946971-1946990 | Msa1172060:CDS | 40.0% |
| ACTTACTAGCAGAGAGTTAG+TGG | + | chr8_1:1947010-1947029 | Msa1172060:CDS | 40.0% | |
| ! | GAGGCTGTTTCATCTAAAGT+TGG | + | chr8_1:1947053-1947072 | Msa1172060:CDS | 40.0% |
| ! | TGGTCCATCTGAGATTACTA+TGG | + | chr8_1:1947073-1947092 | Msa1172060:CDS | 40.0% |
| ! | GGTCCATCTGAGATTACTAT+GGG | + | chr8_1:1947074-1947093 | Msa1172060:CDS | 40.0% |
| !!! | GTTGCTCGAGTTTTGGATTT+TGG | + | chr8_1:1947128-1947147 | Msa1172060:CDS | 40.0% |
| CTCTTGGTTATGACCTGTAT+AGG | + | chr8_1:1947216-1947235 | Msa1172060:CDS | 40.0% | |
| CATTACTGTTAGCCCTATAC+AGG | - | chr8_1:1947232-1947251 | None:intergenic | 40.0% | |
| ! | GGTTGGAGTTGATTACAACT+TGG | + | chr8_1:1947364-1947383 | Msa1172060:CDS | 40.0% |
| TGAATCCCTTGATCTGTTTG+AGG | + | chr8_1:1947439-1947458 | Msa1172060:CDS | 40.0% | |
| CTTCATCCTCAAACAGATCA+AGG | - | chr8_1:1947448-1947467 | None:intergenic | 40.0% | |
| TCTGTTTGAGGATGAAGATG+AGG | + | chr8_1:1947451-1947470 | Msa1172060:CDS | 40.0% | |
| TGAAGATGAGGAGGATAACA+TGG | + | chr8_1:1947463-1947482 | Msa1172060:CDS | 40.0% | |
| ! | AACGTTTTGTGCTGCAAATG+TGG | + | chr8_1:1946120-1946139 | Msa1172060:CDS | 40.0% |
| ! | ACGTTTTGTGCTGCAAATGT+GGG | + | chr8_1:1946121-1946140 | Msa1172060:CDS | 40.0% |
| CAGACACTTCAGACACATAT+TGG | - | chr8_1:1946169-1946188 | None:intergenic | 40.0% | |
| ! | ACTTTTACCCTCTTGGAATG+GGG | - | chr8_1:1946402-1946421 | None:intergenic | 40.0% |
| ! | GACTTTTACCCTCTTGGAAT+GGG | - | chr8_1:1946403-1946422 | None:intergenic | 40.0% |
| ! | TGACTTTTACCCTCTTGGAA+TGG | - | chr8_1:1946404-1946423 | None:intergenic | 40.0% |
| !! | GACTTTGACTTTTACCCTCT+TGG | - | chr8_1:1946409-1946428 | None:intergenic | 40.0% |
| AGTCAAAGTCAGTGTTCAGA+AGG | + | chr8_1:1946419-1946438 | Msa1172060:CDS | 40.0% | |
| ACTCAACAAGGTAAGACTGT+TGG | - | chr8_1:1946467-1946486 | None:intergenic | 40.0% | |
| ACATGTGTGAATCATGTTCC+AGG | + | chr8_1:1946502-1946521 | Msa1172060:CDS | 40.0% | |
| CATGTGTGAATCATGTTCCA+GGG | + | chr8_1:1946503-1946522 | Msa1172060:CDS | 40.0% | |
| TTAAATCCTCGCGACAAATG+GGG | - | chr8_1:1946833-1946852 | None:intergenic | 40.0% | |
| CCCAAAGCTATGTAAGCTTT+AGG | - | chr8_1:1946867-1946886 | None:intergenic | 40.0% | |
| ! | TCCTATTGTGATTTGCACCA+AGG | + | chr8_1:1946896-1946915 | Msa1172060:CDS | 40.0% |
| ! | ACCTTGGTGCAAATCACAAT+AGG | - | chr8_1:1946900-1946919 | None:intergenic | 40.0% |
| AGCAATGCTGTTAGTAACCT+TGG | - | chr8_1:1946916-1946935 | None:intergenic | 40.0% | |
| ! | TAGATGCTGATCAGTATTGG+AGG | + | chr8_1:1946970-1946989 | Msa1172060:CDS | 40.0% |
| ! | AGATGCTGATCAGTATTGGA+GGG | + | chr8_1:1946971-1946990 | Msa1172060:CDS | 40.0% |
| ACTTACTAGCAGAGAGTTAG+TGG | + | chr8_1:1947010-1947029 | Msa1172060:CDS | 40.0% | |
| ! | GAGGCTGTTTCATCTAAAGT+TGG | + | chr8_1:1947053-1947072 | Msa1172060:CDS | 40.0% |
| ! | TGGTCCATCTGAGATTACTA+TGG | + | chr8_1:1947073-1947092 | Msa1172060:CDS | 40.0% |
| ! | GGTCCATCTGAGATTACTAT+GGG | + | chr8_1:1947074-1947093 | Msa1172060:CDS | 40.0% |
| !!! | GTTGCTCGAGTTTTGGATTT+TGG | + | chr8_1:1947128-1947147 | Msa1172060:CDS | 40.0% |
| CTCTTGGTTATGACCTGTAT+AGG | + | chr8_1:1947216-1947235 | Msa1172060:CDS | 40.0% | |
| CATTACTGTTAGCCCTATAC+AGG | - | chr8_1:1947232-1947251 | None:intergenic | 40.0% | |
| ! | GGTTGGAGTTGATTACAACT+TGG | + | chr8_1:1947364-1947383 | Msa1172060:CDS | 40.0% |
| TGAATCCCTTGATCTGTTTG+AGG | + | chr8_1:1947439-1947458 | Msa1172060:CDS | 40.0% | |
| CTTCATCCTCAAACAGATCA+AGG | - | chr8_1:1947448-1947467 | None:intergenic | 40.0% | |
| TCTGTTTGAGGATGAAGATG+AGG | + | chr8_1:1947451-1947470 | Msa1172060:CDS | 40.0% | |
| TGAAGATGAGGAGGATAACA+TGG | + | chr8_1:1947463-1947482 | Msa1172060:CDS | 40.0% | |
| TGTAGTCTGACCCAAGTTCT+CGG | - | chr8_1:1946276-1946295 | None:intergenic | 45.0% | |
| CAAAGTCAGTGTTCAGAAGG+AGG | + | chr8_1:1946422-1946441 | Msa1172060:CDS | 45.0% | |
| CCTGTTGAACGTACTCAACA+AGG | - | chr8_1:1946479-1946498 | None:intergenic | 45.0% | |
| CCTTGTTGAGTACGTTCAAC+AGG | + | chr8_1:1946476-1946495 | Msa1172060:CDS | 45.0% | |
| !! | GAGCAGCTAATTCTGAAGCA+TGG | + | chr8_1:1946606-1946625 | Msa1172060:CDS | 45.0% |
| CCACCCATAGTAATCTCAGA+TGG | - | chr8_1:1947080-1947099 | None:intergenic | 45.0% | |
| ! | CCATCTGAGATTACTATGGG+TGG | + | chr8_1:1947077-1947096 | Msa1172060:CDS | 45.0% |
| !! | TGCTCAAGTTGCTCGAGTTT+TGG | + | chr8_1:1947121-1947140 | Msa1172060:CDS | 45.0% |
| !!! | TTGGGGCATCTTTTAAAGCC+TGG | + | chr8_1:1947185-1947204 | Msa1172060:CDS | 45.0% |
| ACAGGTCATAACCAAGAGCA+TGG | - | chr8_1:1947214-1947233 | None:intergenic | 45.0% | |
| GGAAGTGATTTCCAAGAACG+AGG | - | chr8_1:1947326-1947345 | None:intergenic | 45.0% | |
| CTTAAAGGACCCTGAATTGG+AGG | + | chr8_1:1947400-1947419 | Msa1172060:CDS | 45.0% | |
| CCATCAACTCCTCCAATTCA+GGG | - | chr8_1:1947412-1947431 | None:intergenic | 45.0% | |
| GTTTGAGGATGAAGATGAGG+AGG | + | chr8_1:1947454-1947473 | Msa1172060:CDS | 45.0% | |
| TGTAGTCTGACCCAAGTTCT+CGG | - | chr8_1:1946276-1946295 | None:intergenic | 45.0% | |
| CAAAGTCAGTGTTCAGAAGG+AGG | + | chr8_1:1946422-1946441 | Msa1172060:CDS | 45.0% | |
| CCTGTTGAACGTACTCAACA+AGG | - | chr8_1:1946479-1946498 | None:intergenic | 45.0% | |
| CCTTGTTGAGTACGTTCAAC+AGG | + | chr8_1:1946476-1946495 | Msa1172060:CDS | 45.0% | |
| !! | GAGCAGCTAATTCTGAAGCA+TGG | + | chr8_1:1946606-1946625 | Msa1172060:CDS | 45.0% |
| CCACCCATAGTAATCTCAGA+TGG | - | chr8_1:1947080-1947099 | None:intergenic | 45.0% | |
| ! | CCATCTGAGATTACTATGGG+TGG | + | chr8_1:1947077-1947096 | Msa1172060:CDS | 45.0% |
| !! | TGCTCAAGTTGCTCGAGTTT+TGG | + | chr8_1:1947121-1947140 | Msa1172060:CDS | 45.0% |
| !!! | TTGGGGCATCTTTTAAAGCC+TGG | + | chr8_1:1947185-1947204 | Msa1172060:CDS | 45.0% |
| ACAGGTCATAACCAAGAGCA+TGG | - | chr8_1:1947214-1947233 | None:intergenic | 45.0% | |
| GGAAGTGATTTCCAAGAACG+AGG | - | chr8_1:1947326-1947345 | None:intergenic | 45.0% | |
| CTTAAAGGACCCTGAATTGG+AGG | + | chr8_1:1947400-1947419 | Msa1172060:CDS | 45.0% | |
| CCATCAACTCCTCCAATTCA+GGG | - | chr8_1:1947412-1947431 | None:intergenic | 45.0% | |
| GTTTGAGGATGAAGATGAGG+AGG | + | chr8_1:1947454-1947473 | Msa1172060:CDS | 45.0% | |
| !! | TGCAAGTAGCTTTGGCACAC+GGG | - | chr8_1:1946249-1946268 | None:intergenic | 50.0% |
| !! | CTGCAAGTAGCTTTGGCACA+CGG | - | chr8_1:1946250-1946269 | None:intergenic | 50.0% |
| TGAATCATGTTCCAGGGTGC+AGG | + | chr8_1:1946509-1946528 | Msa1172060:CDS | 50.0% | |
| CAACTGCAACCCACTGATCA+GGG | - | chr8_1:1946539-1946558 | None:intergenic | 50.0% | |
| ACAACTGCAACCCACTGATC+AGG | - | chr8_1:1946540-1946559 | None:intergenic | 50.0% | |
| ! | TAACCAAGAGCATGGTCACC+AGG | - | chr8_1:1947206-1947225 | None:intergenic | 50.0% |
| CCCTGAATTGGAGGAGTTGA+TGG | + | chr8_1:1947409-1947428 | Msa1172060:CDS | 50.0% | |
| GCCATCAACTCCTCCAATTC+AGG | - | chr8_1:1947413-1947432 | None:intergenic | 50.0% | |
| !! | GAATTGGAGGAGTTGATGGC+TGG | + | chr8_1:1947413-1947432 | Msa1172060:CDS | 50.0% |
| !! | TGCAAGTAGCTTTGGCACAC+GGG | - | chr8_1:1946249-1946268 | None:intergenic | 50.0% |
| !! | CTGCAAGTAGCTTTGGCACA+CGG | - | chr8_1:1946250-1946269 | None:intergenic | 50.0% |
| TGAATCATGTTCCAGGGTGC+AGG | + | chr8_1:1946509-1946528 | Msa1172060:CDS | 50.0% | |
| CAACTGCAACCCACTGATCA+GGG | - | chr8_1:1946539-1946558 | None:intergenic | 50.0% | |
| ACAACTGCAACCCACTGATC+AGG | - | chr8_1:1946540-1946559 | None:intergenic | 50.0% | |
| ! | TAACCAAGAGCATGGTCACC+AGG | - | chr8_1:1947206-1947225 | None:intergenic | 50.0% |
| CCCTGAATTGGAGGAGTTGA+TGG | + | chr8_1:1947409-1947428 | Msa1172060:CDS | 50.0% | |
| GCCATCAACTCCTCCAATTC+AGG | - | chr8_1:1947413-1947432 | None:intergenic | 50.0% | |
| !! | GAATTGGAGGAGTTGATGGC+TGG | + | chr8_1:1947413-1947432 | Msa1172060:CDS | 50.0% |
| !! | GCAAGTAGCTTTGGCACACG+GGG | - | chr8_1:1946248-1946267 | None:intergenic | 55.0% |
| TCGGTGGCTGCAAGTAGCTT+TGG | - | chr8_1:1946257-1946276 | None:intergenic | 55.0% | |
| ACTTGCAGCCACCGAGAACT+TGG | + | chr8_1:1946262-1946281 | Msa1172060:CDS | 55.0% | |
| CTTGCAGCCACCGAGAACTT+GGG | + | chr8_1:1946263-1946282 | Msa1172060:CDS | 55.0% | |
| AGTCTGACCCAAGTTCTCGG+TGG | - | chr8_1:1946273-1946292 | None:intergenic | 55.0% | |
| TGCAGGCTAACCCTGATCAG+TGG | + | chr8_1:1946526-1946545 | Msa1172060:CDS | 55.0% | |
| GCAGGCTAACCCTGATCAGT+GGG | + | chr8_1:1946527-1946546 | Msa1172060:CDS | 55.0% | |
| GGGTTGCAGTTGTGCAACTC+AGG | + | chr8_1:1946547-1946566 | Msa1172060:CDS | 55.0% | |
| TCAGGCAACATGTCTCGCAC+AGG | + | chr8_1:1946565-1946584 | Msa1172060:CDS | 55.0% | |
| AATCAGCCCCATTTGTCGCG+AGG | + | chr8_1:1946824-1946843 | Msa1172060:CDS | 55.0% | |
| AAGCCTGGTGACCATGCTCT+TGG | + | chr8_1:1947200-1947219 | Msa1172060:CDS | 55.0% | |
| GATGTGGGAAGCCTCGTTCT+TGG | + | chr8_1:1947312-1947331 | Msa1172060:CDS | 55.0% | |
| !! | GCAAGTAGCTTTGGCACACG+GGG | - | chr8_1:1946248-1946267 | None:intergenic | 55.0% |
| TCGGTGGCTGCAAGTAGCTT+TGG | - | chr8_1:1946257-1946276 | None:intergenic | 55.0% | |
| ACTTGCAGCCACCGAGAACT+TGG | + | chr8_1:1946262-1946281 | Msa1172060:CDS | 55.0% | |
| CTTGCAGCCACCGAGAACTT+GGG | + | chr8_1:1946263-1946282 | Msa1172060:CDS | 55.0% | |
| AGTCTGACCCAAGTTCTCGG+TGG | - | chr8_1:1946273-1946292 | None:intergenic | 55.0% | |
| TGCAGGCTAACCCTGATCAG+TGG | + | chr8_1:1946526-1946545 | Msa1172060:CDS | 55.0% | |
| GCAGGCTAACCCTGATCAGT+GGG | + | chr8_1:1946527-1946546 | Msa1172060:CDS | 55.0% | |
| GGGTTGCAGTTGTGCAACTC+AGG | + | chr8_1:1946547-1946566 | Msa1172060:CDS | 55.0% | |
| TCAGGCAACATGTCTCGCAC+AGG | + | chr8_1:1946565-1946584 | Msa1172060:CDS | 55.0% | |
| AATCAGCCCCATTTGTCGCG+AGG | + | chr8_1:1946824-1946843 | Msa1172060:CDS | 55.0% | |
| AAGCCTGGTGACCATGCTCT+TGG | + | chr8_1:1947200-1947219 | Msa1172060:CDS | 55.0% | |
| GATGTGGGAAGCCTCGTTCT+TGG | + | chr8_1:1947312-1947331 | Msa1172060:CDS | 55.0% | |
| GACGGAGCCCCATTCCAAGA+GGG | + | chr8_1:1946392-1946411 | Msa1172060:CDS | 60.0% | |
| !! | ATCAGGGTTAGCCTGCACCC+TGG | - | chr8_1:1946523-1946542 | None:intergenic | 60.0% |
| GACGGAGCCCCATTCCAAGA+GGG | + | chr8_1:1946392-1946411 | Msa1172060:CDS | 60.0% | |
| !! | ATCAGGGTTAGCCTGCACCC+TGG | - | chr8_1:1946523-1946542 | None:intergenic | 60.0% |
| GGACGGAGCCCCATTCCAAG+AGG | + | chr8_1:1946391-1946410 | Msa1172060:CDS | 65.0% | |
| GGACGGAGCCCCATTCCAAG+AGG | + | chr8_1:1946391-1946410 | Msa1172060:CDS | 65.0% | |
| CGGGGCAATGCACGAGCACG+TGG | - | chr8_1:1946230-1946249 | None:intergenic | 70.0% | |
| CGGGGCAATGCACGAGCACG+TGG | - | chr8_1:1946230-1946249 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 1946057 | 1947493 | 1946057 | ID=Msa1172060;Name=Msa1172060 |
| chr8_1 | mRNA | 1946057 | 1947493 | 1946057 | ID=Msa1172060-mRNA-1;Parent=Msa1172060;Name=Msa1172060-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|478 |
| chr8_1 | exon | 1946057 | 1947493 | 1946057 | ID=Msa1172060-mRNA-1:exon:703;Parent=Msa1172060-mRNA-1 |
| chr8_1 | CDS | 1946057 | 1947493 | 1946057 | ID=Msa1172060-mRNA-1:cds;Parent=Msa1172060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
