Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229410 | RHN63526.1 | 87.261 | 471 | 20 | 3 | 1 | 467 | 10 | 444 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229410 | sp|Q55BF2|NMD3_DICDI | 42.981 | 463 | 232 | 10 | 21 | 465 | 10 | 458 | 1.06e-132 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229410 | A0A396ID67 | 87.261 | 471 | 20 | 3 | 1 | 467 | 10 | 444 | 0.0 | 841 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016710 | Msa0229410 | 0.805394 | 1.363778e-49 | -8.615850e-47 |
| Msa0037180 | Msa0229410 | 0.805207 | 1.492224e-49 | -8.615850e-47 |
| Msa0127910 | Msa0229410 | -0.817491 | 3.208000e-52 | -8.615850e-47 |
| Msa0168770 | Msa0229410 | -0.805419 | 1.347169e-49 | -8.615850e-47 |
| Msa0174060 | Msa0229410 | -0.807646 | 4.567033e-50 | -8.615850e-47 |
| Msa0229410 | Msa0334450 | -0.805924 | 1.055254e-49 | -8.615850e-47 |
| Msa0229410 | Msa0390590 | -0.818414 | 1.984873e-52 | -8.615850e-47 |
| Msa0229410 | Msa0523420 | -0.818018 | 2.439824e-52 | -8.615850e-47 |
| Msa0229410 | Msa1039440 | -0.813346 | 2.680887e-51 | -8.615850e-47 |
| Msa0229410 | Msa1172060 | 0.981903 | 9.761698e-154 | -8.615850e-47 |
| Msa0229410 | Msa1205270 | -0.802488 | 5.478688e-49 | -8.615850e-47 |
| Msa0229410 | Msa1213470 | -0.808137 | 3.590493e-50 | -8.615850e-47 |
| Msa0229410 | Msa1300370 | -0.808334 | 3.260044e-50 | -8.615850e-47 |
| Msa0229410 | Msa1352600 | -0.809995 | 1.436035e-50 | -8.615850e-47 |
| Msa0229410 | Msa1363280 | -0.802826 | 4.666734e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229410 | MtrunA17_Chr4g0059211 | 87.261 | 471 | 20 | 3 | 1 | 467 | 10 | 444 | 0.0 | 841 |
| Msa0229410 | MtrunA17_Chr5g0443481 | 54.545 | 462 | 192 | 6 | 19 | 472 | 14 | 465 | 5.37e-165 | 474 |
| Msa0229410 | MtrunA17_Chr3g0109991 | 84.000 | 200 | 32 | 0 | 7 | 206 | 1 | 200 | 2.76e-125 | 365 |
| Msa0229410 | MtrunA17_Chr5g0442961 | 38.462 | 312 | 158 | 7 | 164 | 454 | 5 | 303 | 2.82e-50 | 174 |
| Msa0229410 | MtrunA17_Chr5g0442421 | 39.865 | 296 | 152 | 10 | 165 | 454 | 16 | 291 | 2.56e-48 | 169 |
| Msa0229410 | MtrunA17_Chr5g0396211 | 38.264 | 311 | 143 | 10 | 164 | 454 | 5 | 286 | 1.54e-45 | 161 |
| Msa0229410 | MtrunA17_Chr5g0395031 | 36.875 | 320 | 144 | 9 | 164 | 454 | 5 | 295 | 9.69e-45 | 159 |
| Msa0229410 | MtrunA17_Chr5g0398611 | 35.604 | 323 | 152 | 10 | 164 | 451 | 8 | 309 | 1.57e-42 | 154 |
| Msa0229410 | MtrunA17_Chr5g0443981 | 46.703 | 182 | 81 | 3 | 250 | 417 | 8 | 187 | 2.49e-39 | 143 |
| Msa0229410 | MtrunA17_Chr5g0443171 | 38.889 | 270 | 119 | 8 | 166 | 417 | 9 | 250 | 3.94e-39 | 144 |
| Msa0229410 | MtrunA17_Chr5g0442101 | 40.336 | 238 | 122 | 5 | 214 | 451 | 18 | 235 | 1.55e-38 | 141 |
| Msa0229410 | MtrunA17_Chr5g0441891 | 35.542 | 166 | 85 | 3 | 306 | 454 | 50 | 210 | 3.02e-19 | 87.0 |
| Msa0229410 | MtrunA17_Chr4g0034421 | 33.824 | 204 | 94 | 5 | 252 | 454 | 9 | 172 | 6.23e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229410 | AT2G03820.1 | 58.873 | 479 | 167 | 10 | 10 | 471 | 6 | 471 | 0.0 | 566 |
Find 104 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATCAACTCCTCCAATTC+AGG | 0.234477 | 2_2:-1090748 | None:intergenic |
| GGAACGTGATCAATTCTTAA+AGG | 0.234838 | 2_2:+1090723 | Msa0229410:CDS |
| TACATAGCTTTGGGAAATAT+TGG | 0.252016 | 2_2:+1090211 | Msa0229410:CDS |
| TGCTCAAGTTGCTCGAGTTT+TGG | 0.255945 | 2_2:+1090459 | Msa0229410:CDS |
| TGGTAAATGCAGAATTTATT+TGG | 0.256762 | 2_2:+1089708 | Msa0229410:CDS |
| CTTACCATGTCAGGTTTATC+AGG | 0.270325 | 2_2:+1089389 | None:intergenic |
| CCCAAAGCTATGTAAGCTTT+AGG | 0.296946 | 2_2:-1090202 | None:intergenic |
| TTATCATTACGACTCTTAAT+AGG | 0.312963 | 2_2:-1090076 | None:intergenic |
| TTCTTTATTAAAATCACTTC+AGG | 0.335878 | 2_2:-1090622 | None:intergenic |
| TCCTAAAGCTTACATAGCTT+TGG | 0.338275 | 2_2:+1090201 | Msa0229410:CDS |
| GTTCAGAAGGAGGTTTATAA+TGG | 0.347373 | 2_2:+1089770 | Msa0229410:CDS |
| ATTCTTAAAGGACCCTGAAT+TGG | 0.356998 | 2_2:+1090735 | Msa0229410:CDS |
| AATTAAATCCTCGCGACAAA+TGG | 0.363763 | 2_2:-1090170 | None:intergenic |
| CAGACACTTCAGACACATAT+TGG | 0.363886 | 2_2:-1089504 | None:intergenic |
| CTCTTGGTTATGACCTGTAT+AGG | 0.365703 | 2_2:+1090554 | Msa0229410:CDS |
| ACTTACTAGCAGAGAGTTAG+TGG | 0.368478 | 2_2:+1090348 | Msa0229410:CDS |
| TTTATCTCCCTTACCATGTC+AGG | 0.377835 | 2_2:+1089380 | None:intergenic |
| TGGTCCATCTGAGATTACTA+TGG | 0.385953 | 2_2:+1090411 | Msa0229410:CDS |
| TCCTATGGAGATTGATGATA+AGG | 0.388205 | 2_2:+1090681 | Msa0229410:CDS |
| CCTAAAGCTTACATAGCTTT+GGG | 0.388692 | 2_2:+1090202 | Msa0229410:CDS |
| TGAATCCCTTGATCTGTTTG+AGG | 0.388839 | 2_2:+1090777 | Msa0229410:CDS |
| GATGTGGGAAGCCTCGTTCT+TGG | 0.390234 | 2_2:+1090650 | Msa0229410:CDS |
| CCTTGTTGAGTACGTTCAAC+AGG | 0.393536 | 2_2:+1089814 | Msa0229410:CDS |
| ATTAAATCCTCGCGACAAAT+GGG | 0.395990 | 2_2:-1090169 | None:intergenic |
| CCCTGAATTGGAGGAGTTGA+TGG | 0.406602 | 2_2:+1090747 | Msa0229410:CDS |
| AGACACATATTGGTTGTGTT+TGG | 0.408070 | 2_2:-1089494 | None:intergenic |
| TTCTTGGAAATCACTTCCTA+TGG | 0.410620 | 2_2:+1090666 | Msa0229410:CDS |
| ACTTGCAGCCACCGAGAACT+TGG | 0.412238 | 2_2:+1089600 | Msa0229410:CDS |
| ACAACTGCAACCCACTGATC+AGG | 0.417342 | 2_2:-1089875 | None:intergenic |
| ATCTAAGAAACTGTACTTCA+AGG | 0.423477 | 2_2:-1090290 | None:intergenic |
| TTCACTATTTATCAAACAAT+CGG | 0.423711 | 2_2:+1089434 | Msa0229410:CDS |
| TCTTGGTTATGACCTGTATA+GGG | 0.432161 | 2_2:+1090555 | Msa0229410:CDS |
| TCGGTGGCTGCAAGTAGCTT+TGG | 0.434736 | 2_2:-1089592 | None:intergenic |
| CTTCATCCTCAAACAGATCA+AGG | 0.439568 | 2_2:-1090783 | None:intergenic |
| GGAATATATAGTGTTGGATC+TGG | 0.443227 | 2_2:+1090369 | Msa0229410:CDS |
| GCTAGTAAGTAAGGATTTGA+AGG | 0.443338 | 2_2:-1090335 | None:intergenic |
| TCTTAGATGCTGATCAGTAT+TGG | 0.445513 | 2_2:+1090305 | Msa0229410:CDS |
| TAACTCTCTGCTAGTAAGTA+AGG | 0.447479 | 2_2:-1090344 | None:intergenic |
| ACATGTGTGAATCATGTTCC+AGG | 0.458655 | 2_2:+1089840 | Msa0229410:CDS |
| AAGCCTGGTGACCATGCTCT+TGG | 0.462066 | 2_2:+1090538 | Msa0229410:CDS |
| AGCTGTCAGAATCAAACAAA+TGG | 0.463377 | 2_2:+1089979 | Msa0229410:CDS |
| CTTAAAGGACCCTGAATTGG+AGG | 0.464001 | 2_2:+1090738 | Msa0229410:CDS |
| CTGCAAGTAGCTTTGGCACA+CGG | 0.464118 | 2_2:-1089585 | None:intergenic |
| TGAAGATGAGGAGGATAACA+TGG | 0.467885 | 2_2:+1090801 | Msa0229410:CDS |
| TGTAGTCTGACCCAAGTTCT+CGG | 0.487384 | 2_2:-1089611 | None:intergenic |
| CATTACTGTTAGCCCTATAC+AGG | 0.490027 | 2_2:-1090567 | None:intergenic |
| AAACTGTACTTCAAGGTAAG+TGG | 0.497823 | 2_2:-1090283 | None:intergenic |
| GGGTTGCAGTTGTGCAACTC+AGG | 0.502047 | 2_2:+1089885 | Msa0229410:CDS |
| CCATCAACTCCTCCAATTCA+GGG | 0.502743 | 2_2:-1090747 | None:intergenic |
| ACCTTGGTGCAAATCACAAT+AGG | 0.504166 | 2_2:-1090235 | None:intergenic |
| TAATAAAGAAGAAGAGATGT+GGG | 0.504765 | 2_2:+1090635 | Msa0229410:CDS |
| TGCAAGTAGCTTTGGCACAC+GGG | 0.512112 | 2_2:-1089584 | None:intergenic |
| AGAATCAAACAAATGGATCA+TGG | 0.514811 | 2_2:+1089986 | Msa0229410:CDS |
| TGAATCATGTTCCAGGGTGC+AGG | 0.515850 | 2_2:+1089847 | Msa0229410:CDS |
| AGCAATGCTGTTAGTAACCT+TGG | 0.515955 | 2_2:-1090251 | None:intergenic |
| GAATTGGAGGAGTTGATGGC+TGG | 0.520156 | 2_2:+1090751 | Msa0229410:CDS |
| GAGGCTGTTTCATCTAAAGT+TGG | 0.520425 | 2_2:+1090391 | Msa0229410:CDS |
| AGTCAAAGTCAGTGTTCAGA+AGG | 0.524406 | 2_2:+1089757 | Msa0229410:CDS |
| CAAAGTCAGTGTTCAGAAGG+AGG | 0.524866 | 2_2:+1089760 | Msa0229410:CDS |
| TAACCAAGAGCATGGTCACC+AGG | 0.533294 | 2_2:-1090541 | None:intergenic |
| GAATGTCAATAAAGTGATGC+TGG | 0.539343 | 2_2:+1089688 | Msa0229410:CDS |
| ATGGAGATTGATGATAAGGT+TGG | 0.544248 | 2_2:+1090685 | Msa0229410:CDS |
| ATTAGAAACAAAGGAGCTGT+TGG | 0.544271 | 2_2:+1089634 | Msa0229410:CDS |
| AAATGCAGAATTTATTTGGA+CGG | 0.551243 | 2_2:+1089712 | Msa0229410:CDS |
| GCAGGCTAACCCTGATCAGT+GGG | 0.552421 | 2_2:+1089865 | Msa0229410:CDS |
| GTTAGTGGAATATATAGTGT+TGG | 0.553313 | 2_2:+1090363 | Msa0229410:CDS |
| CATGTCAGGTTTATCAGGCA+TGG | 0.555533 | 2_2:+1089394 | None:intergenic |
| TAGATGCTGATCAGTATTGG+AGG | 0.561272 | 2_2:+1090308 | Msa0229410:CDS |
| GGTTGGAGTTGATTACAACT+TGG | 0.561543 | 2_2:+1090702 | Msa0229410:CDS |
| TCCTATTGTGATTTGCACCA+AGG | 0.561646 | 2_2:+1090234 | Msa0229410:CDS |
| TTAATAAAGAAGAAGAGATG+TGG | 0.569687 | 2_2:+1090634 | Msa0229410:CDS |
| ACTCAACAAGGTAAGACTGT+TGG | 0.572997 | 2_2:-1089802 | None:intergenic |
| CCTGTTGAACGTACTCAACA+AGG | 0.574739 | 2_2:-1089814 | None:intergenic |
| CGGGGCAATGCACGAGCACG+TGG | 0.577187 | 2_2:-1089565 | None:intergenic |
| CAACTGCAACCCACTGATCA+GGG | 0.578615 | 2_2:-1089874 | None:intergenic |
| TGCAGGCTAACCCTGATCAG+TGG | 0.581561 | 2_2:+1089864 | Msa0229410:CDS |
| GGTCCATCTGAGATTACTAT+GGG | 0.584432 | 2_2:+1090412 | Msa0229410:CDS |
| GCAGAAGTTGATATTACAGA+AGG | 0.588364 | 2_2:+1089530 | Msa0229410:CDS |
| CCACCCATAGTAATCTCAGA+TGG | 0.590820 | 2_2:-1090415 | None:intergenic |
| TTCATCCTCAAACAGATCAA+GGG | 0.607113 | 2_2:-1090782 | None:intergenic |
| TCTGTTTGAGGATGAAGATG+AGG | 0.610516 | 2_2:+1090789 | Msa0229410:CDS |
| GTTTGAGGATGAAGATGAGG+AGG | 0.612046 | 2_2:+1090792 | Msa0229410:CDS |
| CTTGCAGCCACCGAGAACTT+GGG | 0.612111 | 2_2:+1089601 | Msa0229410:CDS |
| TTTCTATTAGAACTCATTTG+GGG | 0.613658 | 2_2:+1090506 | Msa0229410:CDS |
| CAGACTACAATTAGAAACAA+AGG | 0.614245 | 2_2:+1089625 | Msa0229410:CDS |
| GCAAGTAGCTTTGGCACACG+GGG | 0.617238 | 2_2:-1089583 | None:intergenic |
| TCAGGCAACATGTCTCGCAC+AGG | 0.620504 | 2_2:+1089903 | Msa0229410:CDS |
| TTAAATCCTCGCGACAAATG+GGG | 0.624671 | 2_2:-1090168 | None:intergenic |
| ACCTTATCATCAATCTCCAT+AGG | 0.628583 | 2_2:-1090682 | None:intergenic |
| GACGGAGCCCCATTCCAAGA+GGG | 0.629548 | 2_2:+1089730 | Msa0229410:CDS |
| GAGCAGCTAATTCTGAAGCA+TGG | 0.629749 | 2_2:+1089944 | Msa0229410:CDS |
| TATTTCTCTAAACGAAGTCA+CGG | 0.633975 | 2_2:+1090019 | Msa0229410:CDS |
| CCATCTGAGATTACTATGGG+TGG | 0.634830 | 2_2:+1090415 | Msa0229410:CDS |
| CATGCCTGATAAACCTGACA+TGG | 0.635117 | 2_2:-1089393 | None:intergenic |
| ACAGGTCATAACCAAGAGCA+TGG | 0.640269 | 2_2:-1090549 | None:intergenic |
| AATCAGCCCCATTTGTCGCG+AGG | 0.643382 | 2_2:+1090162 | Msa0229410:CDS |
| ATATATAGTGTTGGATCTGG+AGG | 0.644394 | 2_2:+1090372 | Msa0229410:CDS |
| AGATGCTGATCAGTATTGGA+GGG | 0.645940 | 2_2:+1090309 | Msa0229410:CDS |
| ATCAGGGTTAGCCTGCACCC+TGG | 0.646953 | 2_2:-1089858 | None:intergenic |
| GGAAGTGATTTCCAAGAACG+AGG | 0.668709 | 2_2:-1090661 | None:intergenic |
| GCTGAATATGACAAGTACAA+AGG | 0.669807 | 2_2:+1090592 | Msa0229410:CDS |
| GGACGGAGCCCCATTCCAAG+AGG | 0.670484 | 2_2:+1089729 | Msa0229410:CDS |
| CATGTGTGAATCATGTTCCA+GGG | 0.675490 | 2_2:+1089841 | Msa0229410:CDS |
| AGTCTGACCCAAGTTCTCGG+TGG | 0.743468 | 2_2:-1089608 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCACTATTTATCAAACAAT+CGG | + | chr2_2:1089434-1089453 | Msa0229410:CDS | 20.0% |
| !!! | AACAACTTTTTGGAATTTAT+TGG | + | chr2_2:1090043-1090062 | Msa0229410:CDS | 20.0% |
| !!! | TTTTCTATTAGAACTCATTT+GGG | + | chr2_2:1090505-1090524 | Msa0229410:CDS | 20.0% |
| !! | TTCTTTATTAAAATCACTTC+AGG | - | chr2_2:1090625-1090644 | None:intergenic | 20.0% |
| !! | TTCACTATTTATCAAACAAT+CGG | + | chr2_2:1089434-1089453 | Msa0229410:CDS | 20.0% |
| !!! | AACAACTTTTTGGAATTTAT+TGG | + | chr2_2:1090043-1090062 | Msa0229410:CDS | 20.0% |
| !!! | TTTTCTATTAGAACTCATTT+GGG | + | chr2_2:1090505-1090524 | Msa0229410:CDS | 20.0% |
| !! | TTCTTTATTAAAATCACTTC+AGG | - | chr2_2:1090625-1090644 | None:intergenic | 20.0% |
| ! | TGGTAAATGCAGAATTTATT+TGG | + | chr2_2:1089708-1089727 | Msa0229410:CDS | 25.0% |
| ! | AAATGCAGAATTTATTTGGA+CGG | + | chr2_2:1089712-1089731 | Msa0229410:CDS | 25.0% |
| ! | TTATCATTACGACTCTTAAT+AGG | - | chr2_2:1090079-1090098 | None:intergenic | 25.0% |
| !! | CTTTTCTATTAGAACTCATT+TGG | + | chr2_2:1090504-1090523 | Msa0229410:CDS | 25.0% |
| ! | TTTCTATTAGAACTCATTTG+GGG | + | chr2_2:1090506-1090525 | Msa0229410:CDS | 25.0% |
| ! | TTAATAAAGAAGAAGAGATG+TGG | + | chr2_2:1090634-1090653 | Msa0229410:CDS | 25.0% |
| ! | TAATAAAGAAGAAGAGATGT+GGG | + | chr2_2:1090635-1090654 | Msa0229410:CDS | 25.0% |
| ! | TGGTAAATGCAGAATTTATT+TGG | + | chr2_2:1089708-1089727 | Msa0229410:CDS | 25.0% |
| ! | AAATGCAGAATTTATTTGGA+CGG | + | chr2_2:1089712-1089731 | Msa0229410:CDS | 25.0% |
| ! | TTATCATTACGACTCTTAAT+AGG | - | chr2_2:1090079-1090098 | None:intergenic | 25.0% |
| !! | CTTTTCTATTAGAACTCATT+TGG | + | chr2_2:1090504-1090523 | Msa0229410:CDS | 25.0% |
| ! | TTTCTATTAGAACTCATTTG+GGG | + | chr2_2:1090506-1090525 | Msa0229410:CDS | 25.0% |
| ! | TTAATAAAGAAGAAGAGATG+TGG | + | chr2_2:1090634-1090653 | Msa0229410:CDS | 25.0% |
| ! | TAATAAAGAAGAAGAGATGT+GGG | + | chr2_2:1090635-1090654 | Msa0229410:CDS | 25.0% |
| CAGACTACAATTAGAAACAA+AGG | + | chr2_2:1089625-1089644 | Msa0229410:CDS | 30.0% | |
| AGAATCAAACAAATGGATCA+TGG | + | chr2_2:1089986-1090005 | Msa0229410:CDS | 30.0% | |
| TATTTCTCTAAACGAAGTCA+CGG | + | chr2_2:1090019-1090038 | Msa0229410:CDS | 30.0% | |
| !! | TACATAGCTTTGGGAAATAT+TGG | + | chr2_2:1090211-1090230 | Msa0229410:CDS | 30.0% |
| ATCTAAGAAACTGTACTTCA+AGG | - | chr2_2:1090293-1090312 | None:intergenic | 30.0% | |
| GTTAGTGGAATATATAGTGT+TGG | + | chr2_2:1090363-1090382 | Msa0229410:CDS | 30.0% | |
| CAGACTACAATTAGAAACAA+AGG | + | chr2_2:1089625-1089644 | Msa0229410:CDS | 30.0% | |
| AGAATCAAACAAATGGATCA+TGG | + | chr2_2:1089986-1090005 | Msa0229410:CDS | 30.0% | |
| TATTTCTCTAAACGAAGTCA+CGG | + | chr2_2:1090019-1090038 | Msa0229410:CDS | 30.0% | |
| !! | TACATAGCTTTGGGAAATAT+TGG | + | chr2_2:1090211-1090230 | Msa0229410:CDS | 30.0% |
| ATCTAAGAAACTGTACTTCA+AGG | - | chr2_2:1090293-1090312 | None:intergenic | 30.0% | |
| GTTAGTGGAATATATAGTGT+TGG | + | chr2_2:1090363-1090382 | Msa0229410:CDS | 30.0% | |
| ! | AGACACATATTGGTTGTGTT+TGG | - | chr2_2:1089497-1089516 | None:intergenic | 35.0% |
| !! | GCAGAAGTTGATATTACAGA+AGG | + | chr2_2:1089530-1089549 | Msa0229410:CDS | 35.0% |
| ATTAGAAACAAAGGAGCTGT+TGG | + | chr2_2:1089634-1089653 | Msa0229410:CDS | 35.0% | |
| GAATGTCAATAAAGTGATGC+TGG | + | chr2_2:1089688-1089707 | Msa0229410:CDS | 35.0% | |
| GTTCAGAAGGAGGTTTATAA+TGG | + | chr2_2:1089770-1089789 | Msa0229410:CDS | 35.0% | |
| ! | CAGGCGTACTTTCTTTTATT+TGG | + | chr2_2:1089922-1089941 | Msa0229410:CDS | 35.0% |
| AGCTGTCAGAATCAAACAAA+TGG | + | chr2_2:1089979-1089998 | Msa0229410:CDS | 35.0% | |
| ! | AAGTCACGGTAACAACTTTT+TGG | + | chr2_2:1090033-1090052 | Msa0229410:CDS | 35.0% |
| ATTAAATCCTCGCGACAAAT+GGG | - | chr2_2:1090172-1090191 | None:intergenic | 35.0% | |
| AATTAAATCCTCGCGACAAA+TGG | - | chr2_2:1090173-1090192 | None:intergenic | 35.0% | |
| TCCTAAAGCTTACATAGCTT+TGG | + | chr2_2:1090201-1090220 | Msa0229410:CDS | 35.0% | |
| CCTAAAGCTTACATAGCTTT+GGG | + | chr2_2:1090202-1090221 | Msa0229410:CDS | 35.0% | |
| AAACTGTACTTCAAGGTAAG+TGG | - | chr2_2:1090286-1090305 | None:intergenic | 35.0% | |
| TCTTAGATGCTGATCAGTAT+TGG | + | chr2_2:1090305-1090324 | Msa0229410:CDS | 35.0% | |
| GCTAGTAAGTAAGGATTTGA+AGG | - | chr2_2:1090338-1090357 | None:intergenic | 35.0% | |
| TAACTCTCTGCTAGTAAGTA+AGG | - | chr2_2:1090347-1090366 | None:intergenic | 35.0% | |
| ! | GGAATATATAGTGTTGGATC+TGG | + | chr2_2:1090369-1090388 | Msa0229410:CDS | 35.0% |
| ! | ATATATAGTGTTGGATCTGG+AGG | + | chr2_2:1090372-1090391 | Msa0229410:CDS | 35.0% |
| TCTTGGTTATGACCTGTATA+GGG | + | chr2_2:1090555-1090574 | Msa0229410:CDS | 35.0% | |
| GCTGAATATGACAAGTACAA+AGG | + | chr2_2:1090592-1090611 | Msa0229410:CDS | 35.0% | |
| TTCTTGGAAATCACTTCCTA+TGG | + | chr2_2:1090666-1090685 | Msa0229410:CDS | 35.0% | |
| ! | TCCTATGGAGATTGATGATA+AGG | + | chr2_2:1090681-1090700 | Msa0229410:CDS | 35.0% |
| ACCTTATCATCAATCTCCAT+AGG | - | chr2_2:1090685-1090704 | None:intergenic | 35.0% | |
| ! | ATGGAGATTGATGATAAGGT+TGG | + | chr2_2:1090685-1090704 | Msa0229410:CDS | 35.0% |
| GGAACGTGATCAATTCTTAA+AGG | + | chr2_2:1090723-1090742 | Msa0229410:CDS | 35.0% | |
| ATTCTTAAAGGACCCTGAAT+TGG | + | chr2_2:1090735-1090754 | Msa0229410:CDS | 35.0% | |
| TTCATCCTCAAACAGATCAA+GGG | - | chr2_2:1090785-1090804 | None:intergenic | 35.0% | |
| ! | AGACACATATTGGTTGTGTT+TGG | - | chr2_2:1089497-1089516 | None:intergenic | 35.0% |
| !! | GCAGAAGTTGATATTACAGA+AGG | + | chr2_2:1089530-1089549 | Msa0229410:CDS | 35.0% |
| ATTAGAAACAAAGGAGCTGT+TGG | + | chr2_2:1089634-1089653 | Msa0229410:CDS | 35.0% | |
| GAATGTCAATAAAGTGATGC+TGG | + | chr2_2:1089688-1089707 | Msa0229410:CDS | 35.0% | |
| GTTCAGAAGGAGGTTTATAA+TGG | + | chr2_2:1089770-1089789 | Msa0229410:CDS | 35.0% | |
| ! | CAGGCGTACTTTCTTTTATT+TGG | + | chr2_2:1089922-1089941 | Msa0229410:CDS | 35.0% |
| AGCTGTCAGAATCAAACAAA+TGG | + | chr2_2:1089979-1089998 | Msa0229410:CDS | 35.0% | |
| ! | AAGTCACGGTAACAACTTTT+TGG | + | chr2_2:1090033-1090052 | Msa0229410:CDS | 35.0% |
| ATTAAATCCTCGCGACAAAT+GGG | - | chr2_2:1090172-1090191 | None:intergenic | 35.0% | |
| AATTAAATCCTCGCGACAAA+TGG | - | chr2_2:1090173-1090192 | None:intergenic | 35.0% | |
| TCCTAAAGCTTACATAGCTT+TGG | + | chr2_2:1090201-1090220 | Msa0229410:CDS | 35.0% | |
| CCTAAAGCTTACATAGCTTT+GGG | + | chr2_2:1090202-1090221 | Msa0229410:CDS | 35.0% | |
| AAACTGTACTTCAAGGTAAG+TGG | - | chr2_2:1090286-1090305 | None:intergenic | 35.0% | |
| TCTTAGATGCTGATCAGTAT+TGG | + | chr2_2:1090305-1090324 | Msa0229410:CDS | 35.0% | |
| GCTAGTAAGTAAGGATTTGA+AGG | - | chr2_2:1090338-1090357 | None:intergenic | 35.0% | |
| TAACTCTCTGCTAGTAAGTA+AGG | - | chr2_2:1090347-1090366 | None:intergenic | 35.0% | |
| ! | GGAATATATAGTGTTGGATC+TGG | + | chr2_2:1090369-1090388 | Msa0229410:CDS | 35.0% |
| ! | ATATATAGTGTTGGATCTGG+AGG | + | chr2_2:1090372-1090391 | Msa0229410:CDS | 35.0% |
| TCTTGGTTATGACCTGTATA+GGG | + | chr2_2:1090555-1090574 | Msa0229410:CDS | 35.0% | |
| GCTGAATATGACAAGTACAA+AGG | + | chr2_2:1090592-1090611 | Msa0229410:CDS | 35.0% | |
| TTCTTGGAAATCACTTCCTA+TGG | + | chr2_2:1090666-1090685 | Msa0229410:CDS | 35.0% | |
| ! | TCCTATGGAGATTGATGATA+AGG | + | chr2_2:1090681-1090700 | Msa0229410:CDS | 35.0% |
| ACCTTATCATCAATCTCCAT+AGG | - | chr2_2:1090685-1090704 | None:intergenic | 35.0% | |
| ! | ATGGAGATTGATGATAAGGT+TGG | + | chr2_2:1090685-1090704 | Msa0229410:CDS | 35.0% |
| GGAACGTGATCAATTCTTAA+AGG | + | chr2_2:1090723-1090742 | Msa0229410:CDS | 35.0% | |
| ATTCTTAAAGGACCCTGAAT+TGG | + | chr2_2:1090735-1090754 | Msa0229410:CDS | 35.0% | |
| TTCATCCTCAAACAGATCAA+GGG | - | chr2_2:1090785-1090804 | None:intergenic | 35.0% | |
| ! | AACGTTTTGTGCTGCAAATG+TGG | + | chr2_2:1089458-1089477 | Msa0229410:CDS | 40.0% |
| ! | ACGTTTTGTGCTGCAAATGT+GGG | + | chr2_2:1089459-1089478 | Msa0229410:CDS | 40.0% |
| CAGACACTTCAGACACATAT+TGG | - | chr2_2:1089507-1089526 | None:intergenic | 40.0% | |
| ! | ACTTTTACCCTCTTGGAATG+GGG | - | chr2_2:1089740-1089759 | None:intergenic | 40.0% |
| ! | GACTTTTACCCTCTTGGAAT+GGG | - | chr2_2:1089741-1089760 | None:intergenic | 40.0% |
| ! | TGACTTTTACCCTCTTGGAA+TGG | - | chr2_2:1089742-1089761 | None:intergenic | 40.0% |
| !! | GACTTTGACTTTTACCCTCT+TGG | - | chr2_2:1089747-1089766 | None:intergenic | 40.0% |
| AGTCAAAGTCAGTGTTCAGA+AGG | + | chr2_2:1089757-1089776 | Msa0229410:CDS | 40.0% | |
| ACTCAACAAGGTAAGACTGT+TGG | - | chr2_2:1089805-1089824 | None:intergenic | 40.0% | |
| ACATGTGTGAATCATGTTCC+AGG | + | chr2_2:1089840-1089859 | Msa0229410:CDS | 40.0% | |
| CATGTGTGAATCATGTTCCA+GGG | + | chr2_2:1089841-1089860 | Msa0229410:CDS | 40.0% | |
| TTAAATCCTCGCGACAAATG+GGG | - | chr2_2:1090171-1090190 | None:intergenic | 40.0% | |
| CCCAAAGCTATGTAAGCTTT+AGG | - | chr2_2:1090205-1090224 | None:intergenic | 40.0% | |
| ! | TCCTATTGTGATTTGCACCA+AGG | + | chr2_2:1090234-1090253 | Msa0229410:CDS | 40.0% |
| ! | ACCTTGGTGCAAATCACAAT+AGG | - | chr2_2:1090238-1090257 | None:intergenic | 40.0% |
| AGCAATGCTGTTAGTAACCT+TGG | - | chr2_2:1090254-1090273 | None:intergenic | 40.0% | |
| ! | TAGATGCTGATCAGTATTGG+AGG | + | chr2_2:1090308-1090327 | Msa0229410:CDS | 40.0% |
| ! | AGATGCTGATCAGTATTGGA+GGG | + | chr2_2:1090309-1090328 | Msa0229410:CDS | 40.0% |
| ACTTACTAGCAGAGAGTTAG+TGG | + | chr2_2:1090348-1090367 | Msa0229410:CDS | 40.0% | |
| ! | GAGGCTGTTTCATCTAAAGT+TGG | + | chr2_2:1090391-1090410 | Msa0229410:CDS | 40.0% |
| ! | TGGTCCATCTGAGATTACTA+TGG | + | chr2_2:1090411-1090430 | Msa0229410:CDS | 40.0% |
| ! | GGTCCATCTGAGATTACTAT+GGG | + | chr2_2:1090412-1090431 | Msa0229410:CDS | 40.0% |
| !!! | GTTGCTCGAGTTTTGGATTT+TGG | + | chr2_2:1090466-1090485 | Msa0229410:CDS | 40.0% |
| CTCTTGGTTATGACCTGTAT+AGG | + | chr2_2:1090554-1090573 | Msa0229410:CDS | 40.0% | |
| CATTACTGTTAGCCCTATAC+AGG | - | chr2_2:1090570-1090589 | None:intergenic | 40.0% | |
| ! | GGTTGGAGTTGATTACAACT+TGG | + | chr2_2:1090702-1090721 | Msa0229410:CDS | 40.0% |
| TGAATCCCTTGATCTGTTTG+AGG | + | chr2_2:1090777-1090796 | Msa0229410:CDS | 40.0% | |
| CTTCATCCTCAAACAGATCA+AGG | - | chr2_2:1090786-1090805 | None:intergenic | 40.0% | |
| TCTGTTTGAGGATGAAGATG+AGG | + | chr2_2:1090789-1090808 | Msa0229410:CDS | 40.0% | |
| TGAAGATGAGGAGGATAACA+TGG | + | chr2_2:1090801-1090820 | Msa0229410:CDS | 40.0% | |
| ! | AACGTTTTGTGCTGCAAATG+TGG | + | chr2_2:1089458-1089477 | Msa0229410:CDS | 40.0% |
| ! | ACGTTTTGTGCTGCAAATGT+GGG | + | chr2_2:1089459-1089478 | Msa0229410:CDS | 40.0% |
| CAGACACTTCAGACACATAT+TGG | - | chr2_2:1089507-1089526 | None:intergenic | 40.0% | |
| ! | ACTTTTACCCTCTTGGAATG+GGG | - | chr2_2:1089740-1089759 | None:intergenic | 40.0% |
| ! | GACTTTTACCCTCTTGGAAT+GGG | - | chr2_2:1089741-1089760 | None:intergenic | 40.0% |
| ! | TGACTTTTACCCTCTTGGAA+TGG | - | chr2_2:1089742-1089761 | None:intergenic | 40.0% |
| !! | GACTTTGACTTTTACCCTCT+TGG | - | chr2_2:1089747-1089766 | None:intergenic | 40.0% |
| AGTCAAAGTCAGTGTTCAGA+AGG | + | chr2_2:1089757-1089776 | Msa0229410:CDS | 40.0% | |
| ACTCAACAAGGTAAGACTGT+TGG | - | chr2_2:1089805-1089824 | None:intergenic | 40.0% | |
| ACATGTGTGAATCATGTTCC+AGG | + | chr2_2:1089840-1089859 | Msa0229410:CDS | 40.0% | |
| CATGTGTGAATCATGTTCCA+GGG | + | chr2_2:1089841-1089860 | Msa0229410:CDS | 40.0% | |
| TTAAATCCTCGCGACAAATG+GGG | - | chr2_2:1090171-1090190 | None:intergenic | 40.0% | |
| CCCAAAGCTATGTAAGCTTT+AGG | - | chr2_2:1090205-1090224 | None:intergenic | 40.0% | |
| ! | TCCTATTGTGATTTGCACCA+AGG | + | chr2_2:1090234-1090253 | Msa0229410:CDS | 40.0% |
| ! | ACCTTGGTGCAAATCACAAT+AGG | - | chr2_2:1090238-1090257 | None:intergenic | 40.0% |
| AGCAATGCTGTTAGTAACCT+TGG | - | chr2_2:1090254-1090273 | None:intergenic | 40.0% | |
| ! | TAGATGCTGATCAGTATTGG+AGG | + | chr2_2:1090308-1090327 | Msa0229410:CDS | 40.0% |
| ! | AGATGCTGATCAGTATTGGA+GGG | + | chr2_2:1090309-1090328 | Msa0229410:CDS | 40.0% |
| ACTTACTAGCAGAGAGTTAG+TGG | + | chr2_2:1090348-1090367 | Msa0229410:CDS | 40.0% | |
| ! | GAGGCTGTTTCATCTAAAGT+TGG | + | chr2_2:1090391-1090410 | Msa0229410:CDS | 40.0% |
| ! | TGGTCCATCTGAGATTACTA+TGG | + | chr2_2:1090411-1090430 | Msa0229410:CDS | 40.0% |
| ! | GGTCCATCTGAGATTACTAT+GGG | + | chr2_2:1090412-1090431 | Msa0229410:CDS | 40.0% |
| !!! | GTTGCTCGAGTTTTGGATTT+TGG | + | chr2_2:1090466-1090485 | Msa0229410:CDS | 40.0% |
| CTCTTGGTTATGACCTGTAT+AGG | + | chr2_2:1090554-1090573 | Msa0229410:CDS | 40.0% | |
| CATTACTGTTAGCCCTATAC+AGG | - | chr2_2:1090570-1090589 | None:intergenic | 40.0% | |
| ! | GGTTGGAGTTGATTACAACT+TGG | + | chr2_2:1090702-1090721 | Msa0229410:CDS | 40.0% |
| TGAATCCCTTGATCTGTTTG+AGG | + | chr2_2:1090777-1090796 | Msa0229410:CDS | 40.0% | |
| CTTCATCCTCAAACAGATCA+AGG | - | chr2_2:1090786-1090805 | None:intergenic | 40.0% | |
| TCTGTTTGAGGATGAAGATG+AGG | + | chr2_2:1090789-1090808 | Msa0229410:CDS | 40.0% | |
| TGAAGATGAGGAGGATAACA+TGG | + | chr2_2:1090801-1090820 | Msa0229410:CDS | 40.0% | |
| TGTAGTCTGACCCAAGTTCT+CGG | - | chr2_2:1089614-1089633 | None:intergenic | 45.0% | |
| CAAAGTCAGTGTTCAGAAGG+AGG | + | chr2_2:1089760-1089779 | Msa0229410:CDS | 45.0% | |
| CCTGTTGAACGTACTCAACA+AGG | - | chr2_2:1089817-1089836 | None:intergenic | 45.0% | |
| CCTTGTTGAGTACGTTCAAC+AGG | + | chr2_2:1089814-1089833 | Msa0229410:CDS | 45.0% | |
| !! | GAGCAGCTAATTCTGAAGCA+TGG | + | chr2_2:1089944-1089963 | Msa0229410:CDS | 45.0% |
| CCACCCATAGTAATCTCAGA+TGG | - | chr2_2:1090418-1090437 | None:intergenic | 45.0% | |
| ! | CCATCTGAGATTACTATGGG+TGG | + | chr2_2:1090415-1090434 | Msa0229410:CDS | 45.0% |
| !! | TGCTCAAGTTGCTCGAGTTT+TGG | + | chr2_2:1090459-1090478 | Msa0229410:CDS | 45.0% |
| !!! | TTGGGGCATCTTTTAAAGCC+TGG | + | chr2_2:1090523-1090542 | Msa0229410:CDS | 45.0% |
| ACAGGTCATAACCAAGAGCA+TGG | - | chr2_2:1090552-1090571 | None:intergenic | 45.0% | |
| GGAAGTGATTTCCAAGAACG+AGG | - | chr2_2:1090664-1090683 | None:intergenic | 45.0% | |
| CTTAAAGGACCCTGAATTGG+AGG | + | chr2_2:1090738-1090757 | Msa0229410:CDS | 45.0% | |
| CCATCAACTCCTCCAATTCA+GGG | - | chr2_2:1090750-1090769 | None:intergenic | 45.0% | |
| GTTTGAGGATGAAGATGAGG+AGG | + | chr2_2:1090792-1090811 | Msa0229410:CDS | 45.0% | |
| TGTAGTCTGACCCAAGTTCT+CGG | - | chr2_2:1089614-1089633 | None:intergenic | 45.0% | |
| CAAAGTCAGTGTTCAGAAGG+AGG | + | chr2_2:1089760-1089779 | Msa0229410:CDS | 45.0% | |
| CCTGTTGAACGTACTCAACA+AGG | - | chr2_2:1089817-1089836 | None:intergenic | 45.0% | |
| CCTTGTTGAGTACGTTCAAC+AGG | + | chr2_2:1089814-1089833 | Msa0229410:CDS | 45.0% | |
| !! | GAGCAGCTAATTCTGAAGCA+TGG | + | chr2_2:1089944-1089963 | Msa0229410:CDS | 45.0% |
| CCACCCATAGTAATCTCAGA+TGG | - | chr2_2:1090418-1090437 | None:intergenic | 45.0% | |
| ! | CCATCTGAGATTACTATGGG+TGG | + | chr2_2:1090415-1090434 | Msa0229410:CDS | 45.0% |
| !! | TGCTCAAGTTGCTCGAGTTT+TGG | + | chr2_2:1090459-1090478 | Msa0229410:CDS | 45.0% |
| !!! | TTGGGGCATCTTTTAAAGCC+TGG | + | chr2_2:1090523-1090542 | Msa0229410:CDS | 45.0% |
| ACAGGTCATAACCAAGAGCA+TGG | - | chr2_2:1090552-1090571 | None:intergenic | 45.0% | |
| GGAAGTGATTTCCAAGAACG+AGG | - | chr2_2:1090664-1090683 | None:intergenic | 45.0% | |
| CTTAAAGGACCCTGAATTGG+AGG | + | chr2_2:1090738-1090757 | Msa0229410:CDS | 45.0% | |
| CCATCAACTCCTCCAATTCA+GGG | - | chr2_2:1090750-1090769 | None:intergenic | 45.0% | |
| GTTTGAGGATGAAGATGAGG+AGG | + | chr2_2:1090792-1090811 | Msa0229410:CDS | 45.0% | |
| !! | TGCAAGTAGCTTTGGCACAC+GGG | - | chr2_2:1089587-1089606 | None:intergenic | 50.0% |
| !! | CTGCAAGTAGCTTTGGCACA+CGG | - | chr2_2:1089588-1089607 | None:intergenic | 50.0% |
| TGAATCATGTTCCAGGGTGC+AGG | + | chr2_2:1089847-1089866 | Msa0229410:CDS | 50.0% | |
| CAACTGCAACCCACTGATCA+GGG | - | chr2_2:1089877-1089896 | None:intergenic | 50.0% | |
| ACAACTGCAACCCACTGATC+AGG | - | chr2_2:1089878-1089897 | None:intergenic | 50.0% | |
| ! | TAACCAAGAGCATGGTCACC+AGG | - | chr2_2:1090544-1090563 | None:intergenic | 50.0% |
| CCCTGAATTGGAGGAGTTGA+TGG | + | chr2_2:1090747-1090766 | Msa0229410:CDS | 50.0% | |
| GCCATCAACTCCTCCAATTC+AGG | - | chr2_2:1090751-1090770 | None:intergenic | 50.0% | |
| !! | GAATTGGAGGAGTTGATGGC+TGG | + | chr2_2:1090751-1090770 | Msa0229410:CDS | 50.0% |
| !! | TGCAAGTAGCTTTGGCACAC+GGG | - | chr2_2:1089587-1089606 | None:intergenic | 50.0% |
| !! | CTGCAAGTAGCTTTGGCACA+CGG | - | chr2_2:1089588-1089607 | None:intergenic | 50.0% |
| TGAATCATGTTCCAGGGTGC+AGG | + | chr2_2:1089847-1089866 | Msa0229410:CDS | 50.0% | |
| CAACTGCAACCCACTGATCA+GGG | - | chr2_2:1089877-1089896 | None:intergenic | 50.0% | |
| ACAACTGCAACCCACTGATC+AGG | - | chr2_2:1089878-1089897 | None:intergenic | 50.0% | |
| ! | TAACCAAGAGCATGGTCACC+AGG | - | chr2_2:1090544-1090563 | None:intergenic | 50.0% |
| CCCTGAATTGGAGGAGTTGA+TGG | + | chr2_2:1090747-1090766 | Msa0229410:CDS | 50.0% | |
| GCCATCAACTCCTCCAATTC+AGG | - | chr2_2:1090751-1090770 | None:intergenic | 50.0% | |
| !! | GAATTGGAGGAGTTGATGGC+TGG | + | chr2_2:1090751-1090770 | Msa0229410:CDS | 50.0% |
| !! | GCAAGTAGCTTTGGCACACG+GGG | - | chr2_2:1089586-1089605 | None:intergenic | 55.0% |
| TCGGTGGCTGCAAGTAGCTT+TGG | - | chr2_2:1089595-1089614 | None:intergenic | 55.0% | |
| ACTTGCAGCCACCGAGAACT+TGG | + | chr2_2:1089600-1089619 | Msa0229410:CDS | 55.0% | |
| CTTGCAGCCACCGAGAACTT+GGG | + | chr2_2:1089601-1089620 | Msa0229410:CDS | 55.0% | |
| AGTCTGACCCAAGTTCTCGG+TGG | - | chr2_2:1089611-1089630 | None:intergenic | 55.0% | |
| TGCAGGCTAACCCTGATCAG+TGG | + | chr2_2:1089864-1089883 | Msa0229410:CDS | 55.0% | |
| GCAGGCTAACCCTGATCAGT+GGG | + | chr2_2:1089865-1089884 | Msa0229410:CDS | 55.0% | |
| GGGTTGCAGTTGTGCAACTC+AGG | + | chr2_2:1089885-1089904 | Msa0229410:CDS | 55.0% | |
| TCAGGCAACATGTCTCGCAC+AGG | + | chr2_2:1089903-1089922 | Msa0229410:CDS | 55.0% | |
| AATCAGCCCCATTTGTCGCG+AGG | + | chr2_2:1090162-1090181 | Msa0229410:CDS | 55.0% | |
| AAGCCTGGTGACCATGCTCT+TGG | + | chr2_2:1090538-1090557 | Msa0229410:CDS | 55.0% | |
| GATGTGGGAAGCCTCGTTCT+TGG | + | chr2_2:1090650-1090669 | Msa0229410:CDS | 55.0% | |
| !! | GCAAGTAGCTTTGGCACACG+GGG | - | chr2_2:1089586-1089605 | None:intergenic | 55.0% |
| TCGGTGGCTGCAAGTAGCTT+TGG | - | chr2_2:1089595-1089614 | None:intergenic | 55.0% | |
| ACTTGCAGCCACCGAGAACT+TGG | + | chr2_2:1089600-1089619 | Msa0229410:CDS | 55.0% | |
| CTTGCAGCCACCGAGAACTT+GGG | + | chr2_2:1089601-1089620 | Msa0229410:CDS | 55.0% | |
| AGTCTGACCCAAGTTCTCGG+TGG | - | chr2_2:1089611-1089630 | None:intergenic | 55.0% | |
| TGCAGGCTAACCCTGATCAG+TGG | + | chr2_2:1089864-1089883 | Msa0229410:CDS | 55.0% | |
| GCAGGCTAACCCTGATCAGT+GGG | + | chr2_2:1089865-1089884 | Msa0229410:CDS | 55.0% | |
| GGGTTGCAGTTGTGCAACTC+AGG | + | chr2_2:1089885-1089904 | Msa0229410:CDS | 55.0% | |
| TCAGGCAACATGTCTCGCAC+AGG | + | chr2_2:1089903-1089922 | Msa0229410:CDS | 55.0% | |
| AATCAGCCCCATTTGTCGCG+AGG | + | chr2_2:1090162-1090181 | Msa0229410:CDS | 55.0% | |
| AAGCCTGGTGACCATGCTCT+TGG | + | chr2_2:1090538-1090557 | Msa0229410:CDS | 55.0% | |
| GATGTGGGAAGCCTCGTTCT+TGG | + | chr2_2:1090650-1090669 | Msa0229410:CDS | 55.0% | |
| GACGGAGCCCCATTCCAAGA+GGG | + | chr2_2:1089730-1089749 | Msa0229410:CDS | 60.0% | |
| !! | ATCAGGGTTAGCCTGCACCC+TGG | - | chr2_2:1089861-1089880 | None:intergenic | 60.0% |
| GACGGAGCCCCATTCCAAGA+GGG | + | chr2_2:1089730-1089749 | Msa0229410:CDS | 60.0% | |
| !! | ATCAGGGTTAGCCTGCACCC+TGG | - | chr2_2:1089861-1089880 | None:intergenic | 60.0% |
| GGACGGAGCCCCATTCCAAG+AGG | + | chr2_2:1089729-1089748 | Msa0229410:CDS | 65.0% | |
| GGACGGAGCCCCATTCCAAG+AGG | + | chr2_2:1089729-1089748 | Msa0229410:CDS | 65.0% | |
| CGGGGCAATGCACGAGCACG+TGG | - | chr2_2:1089568-1089587 | None:intergenic | 70.0% | |
| CGGGGCAATGCACGAGCACG+TGG | - | chr2_2:1089568-1089587 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 1089395 | 1090831 | 1089395 | ID=Msa0229410;Name=Msa0229410 |
| chr2_2 | mRNA | 1089395 | 1090831 | 1089395 | ID=Msa0229410-mRNA-1;Parent=Msa0229410;Name=Msa0229410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|478 |
| chr2_2 | exon | 1089395 | 1090831 | 1089395 | ID=Msa0229410-mRNA-1:exon:354;Parent=Msa0229410-mRNA-1 |
| chr2_2 | CDS | 1089395 | 1090831 | 1089395 | ID=Msa0229410-mRNA-1:cds;Parent=Msa0229410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
