AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1361670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1361670 MtrunA17_Chr7g0272831 92.170 728 39 2 1 725 1 713 0.0 1350
Msa1361670 MtrunA17_Chr5g0403661 41.988 674 331 10 82 720 5 653 4.33e-174 513
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1361670 AT3G05350.1 69.787 705 190 4 17 720 25 707 0.0 1016
Msa1361670 AT4G36760.1 41.010 673 327 10 82 720 5 641 3.44e-178 524
Msa1361670 AT4G36760.2 41.010 673 327 10 82 720 5 641 4.65e-178 524
Msa1361670 AT4G36760.3 41.010 673 327 10 82 720 5 641 7.41e-178 523

Find 191 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGAAGTGTGCTTGCTTTA+TGG 0.123908 tig0017590:+17691 Msa1361670:three_prime_UTR
TGCCAATAAATTATTCTTAT+TGG 0.138070 tig0017590:+14433 Msa1361670:CDS
CTGCTGCCCTTGCTCAGTTC+TGG 0.152105 tig0017590:+13823 Msa1361670:CDS
GAGAAACAGGGGAGGATTTC+TGG 0.159854 tig0017590:-12982 None:intergenic
AGGAGGTTTGTTATGTTTAT+TGG 0.178219 tig0017590:-10884 None:intergenic
ATCATCAGTGAAACAGTTTA+AGG 0.178580 tig0017590:+17433 Msa1361670:CDS
ATCCAATAAGAATAATTTAT+TGG 0.200077 tig0017590:-14435 None:intergenic
TGCACTCTAACAGGCTTATT+TGG 0.207462 tig0017590:-12061 None:intergenic
CATTTGCACGATCCTTTCTT+TGG 0.216716 tig0017590:+14817 Msa1361670:CDS
CTCAAAACAAGCTGGTTTCT+TGG 0.256747 tig0017590:+13923 Msa1361670:CDS
CGACGGAGGGCGGTGAGTTT+GGG 0.259327 tig0017590:-11003 None:intergenic
GATTTACATGCTAATGTGTT+TGG 0.267426 tig0017590:+17455 Msa1361670:three_prime_UTR
ATTACACGGACAGTTCATTT+TGG 0.274255 tig0017590:+14491 Msa1361670:CDS
TGCTGCCCTTGCTCAGTTCT+GGG 0.276895 tig0017590:+13824 Msa1361670:CDS
ACGACGGAGGGCGGTGAGTT+TGG 0.277564 tig0017590:-11004 None:intergenic
GAATGCAAGATTGTCATTTA+AGG 0.279658 tig0017590:+13041 Msa1361670:CDS
TCTGAATTGTAGTAATTAAA+AGG 0.288056 tig0017590:+17776 Msa1361670:three_prime_UTR
CAAATCTTGTGGATGAAATA+TGG 0.290355 tig0017590:+12017 Msa1361670:CDS
ACAACTACCACTCAGTAGTA+TGG 0.292302 tig0017590:+16557 Msa1361670:CDS
CACTCTTTCTCTCTAGTTGT+TGG 0.302750 tig0017590:-14518 None:intergenic
AAATAGTGAATAGAGATTAA+AGG 0.313256 tig0017590:+17600 Msa1361670:three_prime_UTR
ATGGCCTTTGCTAGAGAAAC+AGG 0.313957 tig0017590:-12995 None:intergenic
GTGCATGACCTAAAGTATTC+TGG 0.318859 tig0017590:+12079 Msa1361670:CDS
CGATCCTTTCTTTGGAAAGT+TGG 0.321545 tig0017590:+14825 Msa1361670:CDS
TCTGTCGCATGCAGCTTTAT+AGG 0.322788 tig0017590:-12873 None:intergenic
GTTGAGACACCAAATCGTTT+TGG 0.335447 tig0017590:+15871 Msa1361670:CDS
TACAGATTAAGTAGGAATTC+TGG 0.340463 tig0017590:-17566 None:intergenic
TCCACAGGTTTCACCATTGC+TGG 0.345962 tig0017590:+17369 Msa1361670:intron
CATCTAAACCAGAATACTTT+AGG 0.348338 tig0017590:-12087 None:intergenic
TTTAGGTCATGCACTCTAAC+AGG 0.349127 tig0017590:-12070 None:intergenic
GCTCTGCTCGCCAATGGCTT+TGG 0.349972 tig0017590:+17395 Msa1361670:CDS
GTACTACAACTCTCTGGTTC+TGG 0.354412 tig0017590:-14404 None:intergenic
TATTCATTCTTAACAATCAA+TGG 0.358257 tig0017590:-10750 None:intergenic
TCTGGAGTATACAGTCAAAT+AGG 0.364377 tig0017590:-17548 None:intergenic
TCTGAGGTCTGAACTTGTTC+AGG 0.366333 tig0017590:+12129 Msa1361670:CDS
GGTAGAAGACAATACATATC+TGG 0.367129 tig0017590:+11114 Msa1361670:CDS
TAAACTGTTTCACTGATGAT+AGG 0.369163 tig0017590:-17430 None:intergenic
TGACTTCCTCCAAAACGATT+TGG 0.369310 tig0017590:-15880 None:intergenic
GCATAACTTGCAGATAAAAT+TGG 0.370195 tig0017590:+16492 Msa1361670:intron
ATTTACATGCTAATGTGTTT+GGG 0.371627 tig0017590:+17456 Msa1361670:three_prime_UTR
TGAGATTGAGATTGAGATTG+AGG 0.373122 tig0017590:-10846 None:intergenic
CCAACGATAAAGCCGCTCTT+TGG 0.378742 tig0017590:+11169 Msa1361670:CDS
CCCTTGCTCAGTTCTGGGAT+TGG 0.382341 tig0017590:+13829 Msa1361670:CDS
AAATTATTCTTATTGGATAG+TGG 0.384241 tig0017590:+14440 Msa1361670:CDS
TCTTGATCAGGCAGTCTTCC+CGG 0.384970 tig0017590:+14767 Msa1361670:CDS
TTGATCATATGATTTGAGTT+TGG 0.386624 tig0017590:+17626 Msa1361670:three_prime_UTR
AAGACCATGCTTTCGGCATT+CGG 0.388615 tig0017590:+15092 Msa1361670:CDS
CAAAACCAGGGGTATCTTCC+GGG 0.391835 tig0017590:-14785 None:intergenic
GCTTACATACGTGCCCATTC+AGG 0.392351 tig0017590:+15921 Msa1361670:CDS
TGTTATGTTCTGTATTGTTA+AGG 0.393564 tig0017590:+11906 Msa1361670:CDS
CAAGGTATCAGTTACCGTTA+TGG 0.404564 tig0017590:+15013 Msa1361670:CDS
GAGGATTTCTGGACAGCAAT+GGG 0.404605 tig0017590:-12971 None:intergenic
TGAGTGGCTCAATGAGGTTT+TGG 0.404752 tig0017590:+11385 Msa1361670:CDS
GATCCTTTCTTTGGAAAGTT+GGG 0.415093 tig0017590:+14826 Msa1361670:CDS
GTCAATGGAGACATCGGGTT+TGG 0.420411 tig0017590:-11034 None:intergenic
GAGATTGAGGAAGGAGGAGG+AGG 0.429171 tig0017590:-10833 None:intergenic
TATTATGAAGACCATGCTTT+CGG 0.430181 tig0017590:+15085 Msa1361670:CDS
ATCAAATATGCATACACAAC+AGG 0.436777 tig0017590:-12448 None:intergenic
TGCTTTCGGCATTCGGATTG+AGG 0.439904 tig0017590:+15099 Msa1361670:CDS
TCATATGATTTGAGTTTGGC+AGG 0.443635 tig0017590:+17630 Msa1361670:three_prime_UTR
CTATGTTTGCTTTCTTCAAG+TGG 0.444865 tig0017590:-12534 None:intergenic
CTCATGCGTGCTGGAAATCC+AGG 0.447160 tig0017590:+11347 Msa1361670:CDS
CAGAGGAAGTATCCAACAAA+AGG 0.448143 tig0017590:-12829 None:intergenic
TATTTGATTGTGGAGATTGA+TGG 0.448485 tig0017590:+12463 Msa1361670:CDS
AGAAGCAACTGAACTCCAAT+TGG 0.450371 tig0017590:+11321 Msa1361670:CDS
AGGGATAATGTAAGCGTCAA+TGG 0.452562 tig0017590:-11049 None:intergenic
TGAGGAAGGAGGAGGAGGAG+TGG 0.455539 tig0017590:-10828 None:intergenic
CTCTGGTGAGCGTCTTGAGA+AGG 0.456914 tig0017590:-11069 None:intergenic
TAGTGTATGATAGCACCATT+TGG 0.458901 tig0017590:-14377 None:intergenic
ATTGAGATTGAGATTGAGGA+AGG 0.459521 tig0017590:-10842 None:intergenic
TGCGGAAATGGAACTGGAAG+AGG 0.463316 tig0017590:-10929 None:intergenic
CAGCCATTGGCATACCTGAA+TGG 0.464361 tig0017590:-15935 None:intergenic
GGAAAGTTGGGCTTGACTAC+AGG 0.465682 tig0017590:+14838 Msa1361670:CDS
GGTGAGTTTGGGGTCGGAGT+CGG 0.466526 tig0017590:-10992 None:intergenic
AGGAGGAGGAGTGGATTGAG+AGG 0.470274 tig0017590:-10819 None:intergenic
CACGCCAGAGCGATGAGCAC+AGG 0.472716 tig0017590:-17481 None:intergenic
AGCACGCATGAGAATCCAAT+TGG 0.472766 tig0017590:-11336 None:intergenic
ATTCATTCTTAACAATCAAT+GGG 0.473265 tig0017590:-10749 None:intergenic
AGGTCTGAACTTGTTCAGGC+TGG 0.477425 tig0017590:+12133 Msa1361670:CDS
TTCTTAACAATCAATGGGTA+AGG 0.477597 tig0017590:-10744 None:intergenic
TCACTAGTAGTAGGTACTCC+TGG 0.480886 tig0017590:-11365 None:intergenic
GAGTTCATCGCTGAATGTTA+CGG 0.481317 tig0017590:+11093 Msa1361670:CDS
ACAGGCTTATTTGGAGGCTC+CGG 0.487763 tig0017590:-12052 None:intergenic
AGCCATTGGCATACCTGAAT+GGG 0.488613 tig0017590:-15934 None:intergenic
AAGCCCAACTTTCCAAAGAA+AGG 0.493763 tig0017590:-14829 None:intergenic
AATTGGATTCTCATGCGTGC+TGG 0.493816 tig0017590:+11338 Msa1361670:CDS
TGGATGGCTCTGCTCGCCAA+TGG 0.496777 tig0017590:+17389 Msa1361670:CDS
TGATGGTCGCTACTTTCTCC+AGG 0.500919 tig0017590:+11194 Msa1361670:CDS
GGGTCATATAGCTCTTGATC+AGG 0.501429 tig0017590:+14755 Msa1361670:intron
ACAGAACATAACACCCTGTC+AGG 0.502146 tig0017590:-11896 None:intergenic
TCGGATACAATCGAATTGTA+TGG 0.504696 tig0017590:-12565 None:intergenic
ACAAAACCAGGGGTATCTTC+CGG 0.511682 tig0017590:-14786 None:intergenic
AATTGCGTGGTTGTTGAACT+TGG 0.515023 tig0017590:+12189 Msa1361670:CDS
ATTCAGCGATGAACTCGCTC+TGG 0.515881 tig0017590:-11086 None:intergenic
TTCTGTTGATATCCTATCGT+TGG 0.516333 tig0017590:-13868 None:intergenic
TTGAGCCACTCACTAGTAGT+AGG 0.517366 tig0017590:-11374 None:intergenic
AAAGCCGCTCTTTGGACTGA+TGG 0.518944 tig0017590:+11177 Msa1361670:CDS
AACGGTAACTGATACCTTGA+GGG 0.519014 tig0017590:-15009 None:intergenic
GGTTCAGGTTCCGGTCCAAA+TGG 0.521296 tig0017590:+14362 Msa1361670:intron
AGTATGATACCTGCAAAACT+CGG 0.521542 tig0017590:-14547 None:intergenic
GGAGGATTTCTGGACAGCAA+TGG 0.521613 tig0017590:-12972 None:intergenic
ATTGAGATTGAGGAAGGAGG+AGG 0.522372 tig0017590:-10836 None:intergenic
CAACTACCACTCAGTAGTAT+GGG 0.524098 tig0017590:+16558 Msa1361670:CDS
CCACTCAGTAGTATGGGAAA+AGG 0.525510 tig0017590:+16564 Msa1361670:CDS
CAGGTTTCACCATTGCTGGA+TGG 0.525995 tig0017590:+17373 Msa1361670:intron
TTTGTACAATTCAAATCTTG+TGG 0.526383 tig0017590:+12006 Msa1361670:CDS
GAGTTTCGCTCAAAACAAGC+TGG 0.527663 tig0017590:+13915 Msa1361670:CDS
AATGCATCCAGCACAAAACC+AGG 0.530179 tig0017590:-14798 None:intergenic
ACTCTAACAGGCTTATTTGG+AGG 0.530606 tig0017590:-12058 None:intergenic
AGAAAGCAAACATAGAGATC+AGG 0.530867 tig0017590:+12542 Msa1361670:CDS
TTGGCGCCAGGTGCTAGAGT+TGG 0.531454 tig0017590:+11404 Msa1361670:CDS
GAGATTGAGATTGAGGAAGG+AGG 0.538408 tig0017590:-10839 None:intergenic
ATAGGAACTGGGCATGGTGT+AGG 0.540303 tig0017590:+14962 Msa1361670:intron
AGTGGTGCTCAATATGTTGA+TGG 0.542016 tig0017590:+14458 Msa1361670:CDS
AATTTGACCCCTCTAGTGAA+TGG 0.542154 tig0017590:+15037 Msa1361670:CDS
AGAGGAAGTATCCAACAAAA+GGG 0.542770 tig0017590:-12828 None:intergenic
GCATACACAACAGGTGAATG+TGG 0.543084 tig0017590:-12439 None:intergenic
TGTACAAATAAACGAGCTCA+TGG 0.543589 tig0017590:-11991 None:intergenic
TCCACAGTACTACAACTCTC+TGG 0.548101 tig0017590:-14410 None:intergenic
GACGGAGGGCGGTGAGTTTG+GGG 0.551049 tig0017590:-11002 None:intergenic
TAAGCGTCAATGGAGACATC+GGG 0.551937 tig0017590:-11039 None:intergenic
ATGAAATATGGAAAGAAGCT+AGG 0.553831 tig0017590:+12029 Msa1361670:CDS
CAATCATGCCATTCACTAGA+GGG 0.554387 tig0017590:-15045 None:intergenic
GCCAATCCCAGAACTGAGCA+AGG 0.554706 tig0017590:-13830 None:intergenic
GATTGTTAAGAATGAATATG+AGG 0.555225 tig0017590:+10755 Msa1361670:exon
TCTGGTGAGCGTCTTGAGAA+GGG 0.558557 tig0017590:-11068 None:intergenic
GAGTGTTGTTCCAAAGCCAT+TGG 0.559693 tig0017590:-17405 None:intergenic
CCAAAGAGCGGCTTTATCGT+TGG 0.561864 tig0017590:-11169 None:intergenic
GGAGGAGGAGTGGATTGAGA+GGG 0.564135 tig0017590:-10818 None:intergenic
GCATGGTCTTCATAATAGCC+AGG 0.566782 tig0017590:-15079 None:intergenic
TATGTTCTGTATTGTTAAGG+AGG 0.571805 tig0017590:+11909 Msa1361670:CDS
TTCAAAAGTTACTGAAGAGG+TGG 0.572917 tig0017590:+12507 Msa1361670:CDS
TCACAGCATACAGATTAAGT+AGG 0.574159 tig0017590:-17574 None:intergenic
TATCGACAACAGAGATCGAT+TGG 0.575433 tig0017590:+16530 Msa1361670:CDS
CTCCCCTGTTTCTCTAGCAA+AGG 0.578494 tig0017590:+12991 Msa1361670:CDS
AATATGGAAAGAAGCTAGGC+CGG 0.579709 tig0017590:+12033 Msa1361670:CDS
CGAGCAGAGCCATCCAGCAA+TGG 0.581491 tig0017590:-17382 None:intergenic
GAGGGGTCAAATTTCCATAA+CGG 0.581522 tig0017590:-15027 None:intergenic
GTAAGCGTCAATGGAGACAT+CGG 0.582195 tig0017590:-11040 None:intergenic
GTATGATACCTGCAAAACTC+GGG 0.582642 tig0017590:-14546 None:intergenic
GGAAGAGGTGCAATTGCGGA+TGG 0.583401 tig0017590:-10914 None:intergenic
TTTGGAGAAGAGACGACGGA+GGG 0.584005 tig0017590:-11016 None:intergenic
AATGTTCATGAAGGCCCTCA+AGG 0.587601 tig0017590:+14995 Msa1361670:CDS
TCTTTCAGTTTGGCAGCACG+AGG 0.589915 tig0017590:+12800 Msa1361670:intron
TTTGGAGGAAGTCAATACCT+AGG 0.593416 tig0017590:+15889 Msa1361670:CDS
CTGTCATCTATATAGGAACT+GGG 0.594643 tig0017590:+14951 Msa1361670:intron
GGGGTCGGAGTCGGAATCTG+CGG 0.599428 tig0017590:-10983 None:intergenic
TATGATAGCACCATTTGGAC+CGG 0.600597 tig0017590:-14372 None:intergenic
ATCTATATAGGAACTGGGCA+TGG 0.605092 tig0017590:+14956 Msa1361670:intron
ATGGCACGACTGACATTACA+CGG 0.605881 tig0017590:+14477 Msa1361670:CDS
CAATCCGAATGCCGAAAGCA+TGG 0.612301 tig0017590:-15096 None:intergenic
ACAATCATGCCATTCACTAG+AGG 0.615289 tig0017590:-15046 None:intergenic
CATATGATTTGAGTTTGGCA+GGG 0.615633 tig0017590:+17631 Msa1361670:three_prime_UTR
GGAGAAGAGACGACGGAGGG+CGG 0.615870 tig0017590:-11013 None:intergenic
AAACATAAAACTGAGAGCAA+AGG 0.618764 tig0017590:+12917 Msa1361670:CDS
CGATTCAAAAGTTACTGAAG+AGG 0.618859 tig0017590:+12504 Msa1361670:CDS
TGATGCTTCAGTGATGCAAA+TGG 0.619141 tig0017590:-17669 None:intergenic
AATGGCTTTGGAACAACACT+CGG 0.619733 tig0017590:+17407 Msa1361670:CDS
TGGCCTTTGCTAGAGAAACA+GGG 0.621317 tig0017590:-12994 None:intergenic
GAGGGCGGTGAGTTTGGGGT+CGG 0.624003 tig0017590:-10998 None:intergenic
TCAATGCCAACTCTAGCACC+TGG 0.624673 tig0017590:-11410 None:intergenic
CGGAGTCGGAATCTGCGGAA+CGG 0.626583 tig0017590:-10978 None:intergenic
CAATTGCGGATGGAGAAGAA+AGG 0.628660 tig0017590:-10904 None:intergenic
TGTGTATGCATATTTGATTG+TGG 0.629245 tig0017590:+12453 Msa1361670:CDS
ACCAGAGAGTTGTAGTACTG+TGG 0.631950 tig0017590:+14409 Msa1361670:CDS
GGCCTTTGCTAGAGAAACAG+GGG 0.632956 tig0017590:-12993 None:intergenic
CATACACAACAGGTGAATGT+GGG 0.637275 tig0017590:-12438 None:intergenic
TAACGGTAACTGATACCTTG+AGG 0.638013 tig0017590:-15010 None:intergenic
AACTGGAAGAGGTGCAATTG+CGG 0.640869 tig0017590:-10918 None:intergenic
TTGCGGATGGAGAAGAAAGG+AGG 0.641165 tig0017590:-10901 None:intergenic
GTTGGGCTTGACTACAGGCA+TGG 0.641820 tig0017590:+14843 Msa1361670:CDS
GCTGCATTGAATGTTCATGA+AGG 0.642355 tig0017590:+14986 Msa1361670:CDS
CGTCGAAATTGTCATCTCTG+AGG 0.649648 tig0017590:+12113 Msa1361670:CDS
CCGCGCTTGATGAAATTGCG+TGG 0.650905 tig0017590:+12176 Msa1361670:CDS
AGACAGAAATTACCAACGAT+AGG 0.652102 tig0017590:+13856 Msa1361670:CDS
ATGCATCCAGCACAAAACCA+GGG 0.653908 tig0017590:-14797 None:intergenic
ATGATTGTTAGCAATGAACC+TGG 0.657588 tig0017590:+15061 Msa1361670:CDS
TACTAGTGAGTGGCTCAATG+AGG 0.661559 tig0017590:+11379 Msa1361670:CDS
TGCATCCAGCACAAAACCAG+GGG 0.662714 tig0017590:-14796 None:intergenic
TACAATAGCAGCATTAACAG+AGG 0.662984 tig0017590:-12846 None:intergenic
ACTAGCTTTGACACGATAAG+CGG 0.665943 tig0017590:+13948 Msa1361670:CDS
CCAATCCCAGAACTGAGCAA+GGG 0.665964 tig0017590:-13829 None:intergenic
GTTTGGAGAAGAGACGACGG+AGG 0.672246 tig0017590:-11017 None:intergenic
GAGTACCTACTACTAGTGAG+TGG 0.690178 tig0017590:+11369 Msa1361670:CDS
GGAAGTATCCAACAAAAGGG+CGG 0.690333 tig0017590:-12825 None:intergenic
AATCATGCCATTCACTAGAG+GGG 0.692594 tig0017590:-15044 None:intergenic
GCGACCATCAGTCCAAAGAG+CGG 0.693116 tig0017590:-11181 None:intergenic
AGGATTTCTGGACAGCAATG+GGG 0.693206 tig0017590:-12970 None:intergenic
CCACGCAATTTCATCAAGCG+CGG 0.696747 tig0017590:-12176 None:intergenic
CGGGTTTGGAGAAGAGACGA+CGG 0.703049 tig0017590:-11020 None:intergenic
CTTTGCTAGAGAAACAGGGG+AGG 0.705484 tig0017590:-12990 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTGAATAAAACA+CGG + tig0017590:11227-11246 Msa1361670:intron 10.0%
!!! ATTATTTTATCTTTTGTTAT+AGG + tig0017590:11644-11663 Msa1361670:intron 10.0%
!!! TATTTTAAATATATTTCCAA+AGG + tig0017590:16361-16380 Msa1361670:intron 10.0%
!!! TTTTTTTCCTTCTTTTAAAT+TGG - tig0017590:10692-10711 None:intergenic 15.0%
!! AAAAAATATGAAAAATGGAA+GGG - tig0017590:12641-12660 None:intergenic 15.0%
!! TAAAAAATATGAAAAATGGA+AGG - tig0017590:12642-12661 None:intergenic 15.0%
!! AGTTTCAGTTATTAAAAAAT+TGG + tig0017590:13206-13225 Msa1361670:intron 15.0%
!!! CTATAATCTATTCATTTTAT+CGG + tig0017590:14341-14360 Msa1361670:intron 15.0%
!! ATCCAATAAGAATAATTTAT+TGG - tig0017590:14438-14457 None:intergenic 15.0%
!! TGTTAACATTGAAAAAAAAA+AGG - tig0017590:14672-14691 None:intergenic 15.0%
!! TATAATCAAAATGAGTTTAT+TGG + tig0017590:14906-14925 Msa1361670:intron 15.0%
!!! GGATTTTTTTTTTTTGTTGA+AGG - tig0017590:10606-10625 None:intergenic 20.0%
!! CAAAAAAAAAAAATCCTTCT+TGG + tig0017590:10610-10629 Msa1361670:intron 20.0%
!! ACTATATCCAATTTAAAAGA+AGG + tig0017590:10682-10701 Msa1361670:intron 20.0%
!! ATTCATTCTTAACAATCAAT+GGG - tig0017590:10752-10771 None:intergenic 20.0%
!! TATTCATTCTTAACAATCAA+TGG - tig0017590:10753-10772 None:intergenic 20.0%
!! TGTTTATTGGATTTGAAAAA+TGG - tig0017590:10874-10893 None:intergenic 20.0%
!! AAAAAAAAAAAAAACGAACC+TGG - tig0017590:11215-11234 None:intergenic 20.0%
!! TTAGAAAAGATAATCTACTT+AGG - tig0017590:11747-11766 None:intergenic 20.0%
!!! AGTAGATTATCTTTTCTAAT+TGG + tig0017590:11748-11767 Msa1361670:intron 20.0%
!!! AATATGGTTTTAATTGGTTT+AGG - tig0017590:11834-11853 None:intergenic 20.0%
!! AAAAAAAATGCAATAACACA+AGG - tig0017590:11868-11887 None:intergenic 20.0%
!! CCACTAAAAAATATGAAAAA+TGG - tig0017590:12646-12665 None:intergenic 20.0%
!!! CCATTTTTCATATTTTTTAG+TGG + tig0017590:12643-12662 Msa1361670:intron 20.0%
!! AAAATATAGCAATCAAAACA+TGG - tig0017590:13109-13128 None:intergenic 20.0%
!! GTTATTAAAAAATTGGTATC+TGG + tig0017590:13213-13232 Msa1361670:intron 20.0%
!!! ATGATGTTTTGACAAATAAA+AGG - tig0017590:13286-13305 None:intergenic 20.0%
!! TACATTTAAAAGAGTTACTT+AGG + tig0017590:13400-13419 Msa1361670:intron 20.0%
!! ACATTTAAAAGAGTTACTTA+GGG + tig0017590:13401-13420 Msa1361670:intron 20.0%
!! TCTTATCAAATGTTTATGAA+TGG - tig0017590:13714-13733 None:intergenic 20.0%
!!! CTATTTTTTCACTCAAAAAT+TGG + tig0017590:13997-14016 Msa1361670:intron 20.0%
!! CGATAAAATGAATAGATTAT+AGG - tig0017590:14343-14362 None:intergenic 20.0%
!! TGCCAATAAATTATTCTTAT+TGG + tig0017590:14433-14452 Msa1361670:CDS 20.0%
!! AAATTATTCTTATTGGATAG+TGG + tig0017590:14440-14459 Msa1361670:CDS 20.0%
!! ATATTGAATCAAGTAATTCA+TGG - tig0017590:15430-15449 None:intergenic 20.0%
!!! TAATATACTCTCAGAATTTT+TGG - tig0017590:15737-15756 None:intergenic 20.0%
!! AACACTAACAGAATATATAT+CGG - tig0017590:15975-15994 None:intergenic 20.0%
!! ATTGTTTATGTCATAAGATA+AGG - tig0017590:16181-16200 None:intergenic 20.0%
!! TTATGACATAAACAATTGTT+AGG + tig0017590:16185-16204 Msa1361670:intron 20.0%
!! ATAAACAATTGTTAGGTATT+TGG + tig0017590:16192-16211 Msa1361670:intron 20.0%
!!! AAATATAGCATGCTTTAAAA+TGG - tig0017590:16346-16365 None:intergenic 20.0%
!! AGAATCAAAAGAAAGAAAAA+AGG - tig0017590:16618-16637 None:intergenic 20.0%
!! AGAAAAGTAATCCTAAAATT+TGG - tig0017590:17024-17043 None:intergenic 20.0%
!!! AGTGAGTTTCTATTTTTAAA+AGG - tig0017590:17292-17311 None:intergenic 20.0%
!!! TTATAATTTGTAATCCTGTA+TGG + tig0017590:17318-17337 Msa1361670:intron 20.0%
!! AAATAGTGAATAGAGATTAA+AGG + tig0017590:17600-17619 Msa1361670:three_prime_UTR 20.0%
! GATTGTTAAGAATGAATATG+AGG + tig0017590:10755-10774 Msa1361670:exon 25.0%
! ATTATGATTTCATTCATTGC+AGG + tig0017590:11295-11314 Msa1361670:intron 25.0%
!! TTTAATTGGTTTAGGATTTC+AGG - tig0017590:11826-11845 None:intergenic 25.0%
!!! GGAGAAAATATGGTTTTAAT+TGG - tig0017590:11840-11859 None:intergenic 25.0%
! TGTTATGTTCTGTATTGTTA+AGG + tig0017590:11906-11925 Msa1361670:CDS 25.0%
! TTTGTACAATTCAAATCTTG+TGG + tig0017590:12006-12025 Msa1361670:CDS 25.0%
!!! CCATAATTACTTTTCAATCT+CGG - tig0017590:12587-12606 None:intergenic 25.0%
! AAAGGCCATAAAAAATGAAA+CGG + tig0017590:13009-13028 Msa1361670:CDS 25.0%
!!! TTTGATGATCTCTTTTAAGT+TGG + tig0017590:13126-13145 Msa1361670:intron 25.0%
!!! AAAAAATTGGTATCTGGTTT+TGG + tig0017590:13219-13238 Msa1361670:intron 25.0%
! AACTACCATTTGCAAAATAA+AGG - tig0017590:13340-13359 None:intergenic 25.0%
!!! TTTATTTTGCAAATGGTAGT+TGG + tig0017590:13339-13358 Msa1361670:intron 25.0%
! ACAAACGTGTTTCATTAAAA+CGG - tig0017590:13380-13399 None:intergenic 25.0%
!! TGTTTTATCTTATTGTTTGC+AGG + tig0017590:13796-13815 Msa1361670:intron 25.0%
!! GTTTTATCTTATTGTTTGCA+GGG + tig0017590:13797-13816 Msa1361670:intron 25.0%
! ATTCTGTGTAAAAAAGTTGT+AGG + tig0017590:14150-14169 Msa1361670:intron 25.0%
! GTAAACATGTGTCATAATAA+TGG - tig0017590:14204-14223 None:intergenic 25.0%
! ATGAATAGATTATAGGTCTA+GGG - tig0017590:14336-14355 None:intergenic 25.0%
! AATGAATAGATTATAGGTCT+AGG - tig0017590:14337-14356 None:intergenic 25.0%
!!! GTTTCTTGTACAATTTTTTC+TGG + tig0017590:14587-14606 Msa1361670:intron 25.0%
! TAAAACTAGTTGAACAAAAC+TGG - tig0017590:15175-15194 None:intergenic 25.0%
! TGAAGGAGATAAAGTAAATA+TGG - tig0017590:15214-15233 None:intergenic 25.0%
! ATATAATTGGTGTATAGGAT+TGG - tig0017590:15242-15261 None:intergenic 25.0%
!! GAATTTTTCCCACATATAAT+TGG - tig0017590:15255-15274 None:intergenic 25.0%
! TGAATTTCTGATTAAATACG+AGG + tig0017590:15279-15298 Msa1361670:intron 25.0%
! AATATTTGTCAGTCCTATTA+TGG + tig0017590:15794-15813 Msa1361670:intron 25.0%
! ATCATTATGCAATCCATAAT+AGG - tig0017590:15810-15829 None:intergenic 25.0%
! TTCTTTCAAACACTCTAAAT+GGG - tig0017590:16150-16169 None:intergenic 25.0%
! ATTCTTTCAAACACTCTAAA+TGG - tig0017590:16151-16170 None:intergenic 25.0%
! AAAGTTTCAAATACTTTCAG+AGG - tig0017590:16299-16318 None:intergenic 25.0%
! GAAACTTTACCAATGAAAAT+TGG + tig0017590:16311-16330 Msa1361670:intron 25.0%
! AAATTTCAGGAAAAACTAAG+GGG - tig0017590:16419-16438 None:intergenic 25.0%
! GAAATTTCAGGAAAAACTAA+GGG - tig0017590:16420-16439 None:intergenic 25.0%
! TGAAATTTCAGGAAAAACTA+AGG - tig0017590:16421-16440 None:intergenic 25.0%
!!! ACAAATCATTCTGAAATTTC+AGG - tig0017590:16432-16451 None:intergenic 25.0%
! GATGAATTTCTATTACTTCA+TGG - tig0017590:16666-16685 None:intergenic 25.0%
! TGAAGTAATAGAAATTCATC+TGG + tig0017590:16666-16685 Msa1361670:intron 25.0%
! TTTAAAGAAACGGAAGAATA+AGG - tig0017590:16712-16731 None:intergenic 25.0%
! GAATGATTTAACAACAGAAA+AGG - tig0017590:17076-17095 None:intergenic 25.0%
! ATTTACATGCTAATGTGTTT+GGG + tig0017590:17456-17475 Msa1361670:three_prime_UTR 25.0%
!!! TTTTTTTTTTTGAACAAGCC+TGG + tig0017590:17512-17531 Msa1361670:intron 25.0%
!! TTGATCATATGATTTGAGTT+TGG + tig0017590:17626-17645 Msa1361670:three_prime_UTR 25.0%
AAACTTCTTGTTAACCAAGA+AGG - tig0017590:10627-10646 None:intergenic 30.0%
TTCTTAACAATCAATGGGTA+AGG - tig0017590:10747-10766 None:intergenic 30.0%
!! AGGAGGTTTGTTATGTTTAT+TGG - tig0017590:10887-10906 None:intergenic 30.0%
!!! CAATACATATCTGGTTTTAC+TGG + tig0017590:11123-11142 Msa1361670:CDS 30.0%
AATGAATTAACAACTCTGTG+TGG - tig0017590:11271-11290 None:intergenic 30.0%
GGTGATTAGTAATTACTAAC+AGG - tig0017590:11437-11456 None:intergenic 30.0%
! AAAATAAGAGTTAAGTTGCG+TGG - tig0017590:11458-11477 None:intergenic 30.0%
!! CAAATAAGTATTGGAAACAG+AGG - tig0017590:11503-11522 None:intergenic 30.0%
CCATAAGCTCAAATAAGTAT+TGG - tig0017590:11512-11531 None:intergenic 30.0%
CCAATACTTATTTGAGCTTA+TGG + tig0017590:11509-11528 Msa1361670:intron 30.0%
AAGCTGAAAAACAGTGTATA+TGG - tig0017590:11559-11578 None:intergenic 30.0%
CTTATTTCCATAAGCTATTC+AGG + tig0017590:11576-11595 Msa1361670:intron 30.0%
ACTTTATCCTGAATAGCTTA+TGG - tig0017590:11586-11605 None:intergenic 30.0%
ATTAAGCTGTTTATACAAGC+AGG + tig0017590:11720-11739 Msa1361670:intron 30.0%
ATGCAATAACACAAGGAAAA+GGG - tig0017590:11861-11880 None:intergenic 30.0%
AATGCAATAACACAAGGAAA+AGG - tig0017590:11862-11881 None:intergenic 30.0%
TATGTTCTGTATTGTTAAGG+AGG + tig0017590:11909-11928 Msa1361670:CDS 30.0%
CAAATCTTGTGGATGAAATA+TGG + tig0017590:12017-12036 Msa1361670:CDS 30.0%
ATGAAATATGGAAAGAAGCT+AGG + tig0017590:12029-12048 Msa1361670:CDS 30.0%
CATCTAAACCAGAATACTTT+AGG - tig0017590:12090-12109 None:intergenic 30.0%
CAGTACAACAAGTTAAAAGA+AGG - tig0017590:12237-12256 None:intergenic 30.0%
TTGAATAAGATCCTGAATGA+TGG - tig0017590:12295-12314 None:intergenic 30.0%
ATCAAATATGCATACACAAC+AGG - tig0017590:12451-12470 None:intergenic 30.0%
TGTGTATGCATATTTGATTG+TGG + tig0017590:12453-12472 Msa1361670:CDS 30.0%
TATTTGATTGTGGAGATTGA+TGG + tig0017590:12463-12482 Msa1361670:CDS 30.0%
CCGAGATTGAAAAGTAATTA+TGG + tig0017590:12584-12603 Msa1361670:intron 30.0%
! AGCTTGATTTTCTTTCAGTT+TGG + tig0017590:12790-12809 Msa1361670:intron 30.0%
AAACATAAAACTGAGAGCAA+AGG + tig0017590:12917-12936 Msa1361670:CDS 30.0%
! GAATGCAAGATTGTCATTTA+AGG + tig0017590:13041-13060 Msa1361670:CDS 30.0%
TAGCTCATCTATATAATCTG+TGG - tig0017590:13172-13191 None:intergenic 30.0%
GAAAATTATGACAGAACATG+TGG + tig0017590:13241-13260 Msa1361670:intron 30.0%
!! TGTCAAAACATCATTTTTCC+AGG + tig0017590:13292-13311 Msa1361670:intron 30.0%
!! GTCAAAACATCATTTTTCCA+GGG + tig0017590:13293-13312 Msa1361670:intron 30.0%
!!! GTCTTCCTTTATTTTGCAAA+TGG + tig0017590:13332-13351 Msa1361670:intron 30.0%
ATGTTTATGAATGGTCAACA+GGG - tig0017590:13705-13724 None:intergenic 30.0%
AATGTTTATGAATGGTCAAC+AGG - tig0017590:13706-13725 None:intergenic 30.0%
ACAAAAAGCAAGTTTCAATG+TGG - tig0017590:13762-13781 None:intergenic 30.0%
GTAATATTCCCTGGAATAAT+TGG - tig0017590:14078-14097 None:intergenic 30.0%
!!! TGCTTTTTTGTAATATTCCC+TGG - tig0017590:14087-14106 None:intergenic 30.0%
AGCATCACATGCTAAAAATA+TGG + tig0017590:14103-14122 Msa1361670:intron 30.0%
AAACACTAGAACAGAACTAT+GGG - tig0017590:14226-14245 None:intergenic 30.0%
AAAACACTAGAACAGAACTA+TGG - tig0017590:14227-14246 None:intergenic 30.0%
TGAATAGATTATAGGTCTAG+GGG - tig0017590:14335-14354 None:intergenic 30.0%
!!! TCTATTCATTTTATCGGTTC+AGG + tig0017590:14347-14366 Msa1361670:intron 30.0%
!! ATTTGCATGATTGACTTGTA+AGG - tig0017590:14644-14663 None:intergenic 30.0%
TATTATGAAGACCATGCTTT+CGG + tig0017590:15085-15104 Msa1361670:CDS 30.0%
TCCTATACACCAATTATATG+TGG + tig0017590:15243-15262 Msa1361670:intron 30.0%
CCTATACACCAATTATATGT+GGG + tig0017590:15244-15263 Msa1361670:intron 30.0%
ATTTCCAACGTATACAAACT+TGG - tig0017590:15526-15545 None:intergenic 30.0%
!!! TACTCTCAGAATTTTTGGTT+GGG - tig0017590:15732-15751 None:intergenic 30.0%
!!! ATACTCTCAGAATTTTTGGT+TGG - tig0017590:15733-15752 None:intergenic 30.0%
! ATGTAAGCTTTTCAAATCCT+AGG - tig0017590:15909-15928 None:intergenic 30.0%
GAGGAATTGAGAATGTTTAT+TGG + tig0017590:16061-16080 Msa1361670:intron 30.0%
! CAAGTCCTTTTTCTTAAGTA+GGG + tig0017590:16087-16106 Msa1361670:intron 30.0%
! TTTTTCTTAAGTAGGGATCT+GGG + tig0017590:16094-16113 Msa1361670:intron 30.0%
!! ATATCACGAGCTATTTTCAT+AGG - tig0017590:16223-16242 None:intergenic 30.0%
! AATGAGCATCCAATTTTCAT+TGG - tig0017590:16323-16342 None:intergenic 30.0%
TGAGTGTGTGAAAGAATATA+TGG - tig0017590:16460-16479 None:intergenic 30.0%
! GCATAACTTGCAGATAAAAT+TGG + tig0017590:16492-16511 Msa1361670:intron 30.0%
AATTTGATCACACTCTTACT+CGG + tig0017590:16738-16757 Msa1361670:intron 30.0%
TAAAATTTGGCATATGCAAG+AGG - tig0017590:17011-17030 None:intergenic 30.0%
! TCTTGCATATGCCAAATTTT+AGG + tig0017590:17010-17029 Msa1361670:intron 30.0%
TTCTCTTATATGCCATGTAA+CGG + tig0017590:17096-17115 Msa1361670:intron 30.0%
ATGACTATAAACCTTTCGTA+GGG + tig0017590:17171-17190 Msa1361670:intron 30.0%
TTTGAGCAAGGGAAAAATTA+AGG - tig0017590:17230-17249 None:intergenic 30.0%
! AATTTTTCCCTTGCTCAAAA+AGG + tig0017590:17231-17250 Msa1361670:intron 30.0%
!! AAAGAATCCTTTTTGAGCAA+GGG - tig0017590:17241-17260 None:intergenic 30.0%
TATAAAACAATCGACCATAC+AGG - tig0017590:17335-17354 None:intergenic 30.0%
TAAACTGTTTCACTGATGAT+AGG - tig0017590:17433-17452 None:intergenic 30.0%
ATCATCAGTGAAACAGTTTA+AGG + tig0017590:17433-17452 Msa1361670:CDS 30.0%
GATTTACATGCTAATGTGTT+TGG + tig0017590:17455-17474 Msa1361670:three_prime_UTR 30.0%
TACAGATTAAGTAGGAATTC+TGG - tig0017590:17569-17588 None:intergenic 30.0%
ATTGAGATTGAGATTGAGGA+AGG - tig0017590:10845-10864 None:intergenic 35.0%
TGAGATTGAGATTGAGATTG+AGG - tig0017590:10849-10868 None:intergenic 35.0%
! TTTTTACGGAGTTGAGAAGA+TGG - tig0017590:10958-10977 None:intergenic 35.0%
GGTAGAAGACAATACATATC+TGG + tig0017590:11114-11133 Msa1361670:CDS 35.0%
GAGGCTAAATGGTAAAATGA+AGG - tig0017590:11484-11503 None:intergenic 35.0%
TATTGGAAACAGAGGCTAAA+TGG - tig0017590:11495-11514 None:intergenic 35.0%
!! GTTTAGGATTTCAGGTTACT+AGG - tig0017590:11818-11837 None:intergenic 35.0%
CAAGGAAAAGGGAGAAAATA+TGG - tig0017590:11850-11869 None:intergenic 35.0%
!!! TTTTTTTTACAGTGCCTGAC+AGG + tig0017590:11882-11901 Msa1361670:intron 35.0%
!!! TTTTTTTACAGTGCCTGACA+GGG + tig0017590:11883-11902 Msa1361670:intron 35.0%
! GAGGCAGTTTCTTTTTACTT+CGG + tig0017590:11928-11947 Msa1361670:CDS 35.0%
TGTACAAATAAACGAGCTCA+TGG - tig0017590:11994-12013 None:intergenic 35.0%
ATCCTTGTAAACCATCATTC+AGG + tig0017590:12281-12300 Msa1361670:intron 35.0%
ATCCTGAATGATGGTTTACA+AGG - tig0017590:12286-12305 None:intergenic 35.0%
!! AGGATCTTATTCAAGTTGCT+TGG + tig0017590:12301-12320 Msa1361670:intron 35.0%
!! GGATCTTATTCAAGTTGCTT+GGG + tig0017590:12302-12321 Msa1361670:intron 35.0%
ATCAACAGTGAAAAACAGAG+GGG - tig0017590:12362-12381 None:intergenic 35.0%
CATCAACAGTGAAAAACAGA+GGG - tig0017590:12363-12382 None:intergenic 35.0%
TCATCAACAGTGAAAAACAG+AGG - tig0017590:12364-12383 None:intergenic 35.0%
TGCCTCTCTTCAAAGAAAAA+GGG - tig0017590:12411-12430 None:intergenic 35.0%
CGATTCAAAAGTTACTGAAG+AGG + tig0017590:12504-12523 Msa1361670:CDS 35.0%
TTCAAAAGTTACTGAAGAGG+TGG + tig0017590:12507-12526 Msa1361670:CDS 35.0%
CTATGTTTGCTTTCTTCAAG+TGG - tig0017590:12537-12556 None:intergenic 35.0%
AGAAAGCAAACATAGAGATC+AGG + tig0017590:12542-12561 Msa1361670:CDS 35.0%
TCGGATACAATCGAATTGTA+TGG - tig0017590:12568-12587 None:intergenic 35.0%
TTTAGTGGAAATGTCCAAGA+AGG + tig0017590:12658-12677 Msa1361670:intron 35.0%
TTAGTGGAAATGTCCAAGAA+GGG + tig0017590:12659-12678 Msa1361670:intron 35.0%
!! AGAGGAAGTATCCAACAAAA+GGG - tig0017590:12831-12850 None:intergenic 35.0%
TACAATAGCAGCATTAACAG+AGG - tig0017590:12849-12868 None:intergenic 35.0%
!!! CAGCTCCGTTTCATTTTTTA+TGG - tig0017590:13017-13036 None:intergenic 35.0%
AAAAATGAAACGGAGCTGAA+AGG + tig0017590:13019-13038 Msa1361670:CDS 35.0%
ATCCTTGTCAAGGTAAGTTA+TGG - tig0017590:13070-13089 None:intergenic 35.0%
ATTGTGAGTAATCCTTGTCA+AGG - tig0017590:13080-13099 None:intergenic 35.0%
!! AAACATCATTTTTCCAGGGT+AGG + tig0017590:13297-13316 Msa1361670:intron 35.0%
TGTTTATGAATGGTCAACAG+GGG - tig0017590:13704-13723 None:intergenic 35.0%
AGACAGAAATTACCAACGAT+AGG + tig0017590:13856-13875 Msa1361670:CDS 35.0%
TTCTGTTGATATCCTATCGT+TGG - tig0017590:13871-13890 None:intergenic 35.0%
!!! CTGTCTTTTTTTCGAAAGAC+TGG + tig0017590:14044-14063 Msa1361670:intron 35.0%
CTTAACAGCCAATTATTCCA+GGG + tig0017590:14067-14086 Msa1361670:intron 35.0%
AGATCGACAGATATAACCTT+TGG + tig0017590:14296-14315 Msa1361670:intron 35.0%
TAGTGTATGATAGCACCATT+TGG - tig0017590:14380-14399 None:intergenic 35.0%
! ATTACACGGACAGTTCATTT+TGG + tig0017590:14491-14510 Msa1361670:CDS 35.0%
AGTATGATACCTGCAAAACT+CGG - tig0017590:14550-14569 None:intergenic 35.0%
AAGTAAGATTGCTAGAACTC+AGG - tig0017590:14695-14714 None:intergenic 35.0%
TCAACACATATCTAATTGCC+AGG + tig0017590:14734-14753 Msa1361670:intron 35.0%
CAACACATATCTAATTGCCA+GGG + tig0017590:14735-14754 Msa1361670:intron 35.0%
! GATCCTTTCTTTGGAAAGTT+GGG + tig0017590:14826-14845 Msa1361670:CDS 35.0%
!! TGGTATATTTTTGCTTCCAG+TGG + tig0017590:14863-14882 Msa1361670:intron 35.0%
!! TATATTTTTGCTTCCAGTGG+TGG + tig0017590:14866-14885 Msa1361670:intron 35.0%
!! ATATTTTTGCTTCCAGTGGT+GGG + tig0017590:14867-14886 Msa1361670:intron 35.0%
TGCGTAACTGTCATCTATAT+AGG + tig0017590:14944-14963 Msa1361670:intron 35.0%
ACTGTCATCTATATAGGAAC+TGG + tig0017590:14950-14969 Msa1361670:intron 35.0%
CTGTCATCTATATAGGAACT+GGG + tig0017590:14951-14970 Msa1361670:intron 35.0%
ATGATTGTTAGCAATGAACC+TGG + tig0017590:15061-15080 Msa1361670:CDS 35.0%
!! ATGCTCTGAAATGTTAACTC+TGG + tig0017590:15146-15165 Msa1361670:intron 35.0%
!! GTATAGGATTGGCTTTATGA+AGG - tig0017590:15231-15250 None:intergenic 35.0%
CCCACATATAATTGGTGTAT+AGG - tig0017590:15247-15266 None:intergenic 35.0%
TCGGTTTCAACTTATATGCA+TGG + tig0017590:15361-15380 Msa1361670:intron 35.0%
! TACAAACTTGGTGATCAAGT+AGG - tig0017590:15514-15533 None:intergenic 35.0%
ATCACCAAGTTTGTATACGT+TGG + tig0017590:15519-15538 Msa1361670:intron 35.0%
!!! AATTTTTGGTTGGGCAAAAC+CGG - tig0017590:15723-15742 None:intergenic 35.0%
CAAATATTATCCCCACAGTT+TGG - tig0017590:15782-15801 None:intergenic 35.0%
ACAGAATATATATCGGACCA+GGG - tig0017590:15968-15987 None:intergenic 35.0%
AACAGAATATATATCGGACC+AGG - tig0017590:15969-15988 None:intergenic 35.0%
! GCAAGTCCTTTTTCTTAAGT+AGG + tig0017590:16086-16105 Msa1361670:intron 35.0%
CAGATCCCTACTTAAGAAAA+AGG - tig0017590:16095-16114 None:intergenic 35.0%
! CTTTTTCTTAAGTAGGGATC+TGG + tig0017590:16093-16112 Msa1361670:intron 35.0%
AAGTAACACATCAGATCCTT+TGG - tig0017590:16380-16399 None:intergenic 35.0%
ATGGAGACGTGTAAAAGATA+GGG - tig0017590:16647-16666 None:intergenic 35.0%
AAAGAAACGGAAGAATAAGG+AGG - tig0017590:16709-16728 None:intergenic 35.0%
! TGTTGTTCATTTGGGGTAAA+GGG - tig0017590:16850-16869 None:intergenic 35.0%
! TTGTTGTTCATTTGGGGTAA+AGG - tig0017590:16851-16870 None:intergenic 35.0%
TACCCCAAATGAACAACAAA+AGG + tig0017590:16852-16871 Msa1361670:intron 35.0%
ACCCCAAATGAACAACAAAA+GGG + tig0017590:16853-16872 Msa1361670:intron 35.0%
ATTGGGCTAAGTTCTTCAAT+TGG + tig0017590:16913-16932 Msa1361670:intron 35.0%
TTGGGCTAAGTTCTTCAATT+GGG + tig0017590:16914-16933 Msa1361670:intron 35.0%
TCCATAATTCACGACCAAAA+TGG + tig0017590:16938-16957 Msa1361670:intron 35.0%
!! TCCATTTTGGTCGTGAATTA+TGG - tig0017590:16942-16961 None:intergenic 35.0%
! AGGAAACTTCTTCTCCATTT+TGG - tig0017590:16955-16974 None:intergenic 35.0%
! TGGAGAAGAAGTTTCCTTTT+TGG + tig0017590:16958-16977 Msa1361670:intron 35.0%
! AGAAGAAGTTTCCTTTTTGG+AGG + tig0017590:16961-16980 Msa1361670:intron 35.0%
TTGTATTCAGTCCTCCAAAA+AGG - tig0017590:16975-16994 None:intergenic 35.0%
CATGACTATAAACCTTTCGT+AGG + tig0017590:17170-17189 Msa1361670:intron 35.0%
AGGGAAAAATTAAGGAAGCA+GGG - tig0017590:17222-17241 None:intergenic 35.0%
AAGGGAAAAATTAAGGAAGC+AGG - tig0017590:17223-17242 None:intergenic 35.0%
!! GAAAGAATCCTTTTTGAGCA+AGG - tig0017590:17242-17261 None:intergenic 35.0%
! TCTGGAGTATACAGTCAAAT+AGG - tig0017590:17551-17570 None:intergenic 35.0%
TCACAGCATACAGATTAAGT+AGG - tig0017590:17577-17596 None:intergenic 35.0%
! TCATATGATTTGAGTTTGGC+AGG + tig0017590:17630-17649 Msa1361670:three_prime_UTR 35.0%
! CATATGATTTGAGTTTGGCA+GGG + tig0017590:17631-17650 Msa1361670:three_prime_UTR 35.0%
GTTTATGTACGCAACACACT+TGG + tig0017590:10643-10662 Msa1361670:intron 40.0%
!! AGAAGATGGTTTTGCGGAAA+TGG - tig0017590:10944-10963 None:intergenic 40.0%
!! GAGTTGAGAAGATGGTTTTG+CGG - tig0017590:10950-10969 None:intergenic 40.0%
! AATCTGCGGAACGGTTTTTA+CGG - tig0017590:10972-10991 None:intergenic 40.0%
AGGGATAATGTAAGCGTCAA+TGG - tig0017590:11052-11071 None:intergenic 40.0%
GAGTTCATCGCTGAATGTTA+CGG + tig0017590:11093-11112 Msa1361670:CDS 40.0%
AGAAGCAACTGAACTCCAAT+TGG + tig0017590:11321-11340 Msa1361670:CDS 40.0%
AACACTTCAGCAGGATGTTT+AGG - tig0017590:11784-11803 None:intergenic 40.0%
TACAAACAGAACACTTCAGC+AGG - tig0017590:11793-11812 None:intergenic 40.0%
AATATGGAAAGAAGCTAGGC+CGG + tig0017590:12033-12052 Msa1361670:CDS 40.0%
ACTCTAACAGGCTTATTTGG+AGG - tig0017590:12061-12080 None:intergenic 40.0%
TGCACTCTAACAGGCTTATT+TGG - tig0017590:12064-12083 None:intergenic 40.0%
TTTAGGTCATGCACTCTAAC+AGG - tig0017590:12073-12092 None:intergenic 40.0%
! GTGCATGACCTAAAGTATTC+TGG + tig0017590:12079-12098 Msa1361670:CDS 40.0%
AATTGCGTGGTTGTTGAACT+TGG + tig0017590:12189-12208 Msa1361670:CDS 40.0%
TCAACAGTGAAAAACAGAGG+GGG - tig0017590:12361-12380 None:intergenic 40.0%
!! TCCCCTTTTTCTTTGAAGAG+AGG + tig0017590:12406-12425 Msa1361670:intron 40.0%
GCCTCTCTTCAAAGAAAAAG+GGG - tig0017590:12410-12429 None:intergenic 40.0%
CTGCCTCTCTTCAAAGAAAA+AGG - tig0017590:12412-12431 None:intergenic 40.0%
CATACACAACAGGTGAATGT+GGG - tig0017590:12441-12460 None:intergenic 40.0%
!! CAGAGGAAGTATCCAACAAA+AGG - tig0017590:12832-12851 None:intergenic 40.0%
GACCATAACTTACCTTGACA+AGG + tig0017590:13065-13084 Msa1361670:intron 40.0%
!! ATCATTTTTCCAGGGTAGGT+GGG + tig0017590:13301-13320 Msa1361670:intron 40.0%
AGAGTTACTTAGGGTGTGTT+TGG + tig0017590:13410-13429 Msa1361670:intron 40.0%
TTACTTAGGGTGTGTTTGGA+TGG + tig0017590:13414-13433 Msa1361670:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - tig0017590:13637-13656 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - tig0017590:13641-13660 None:intergenic 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG - tig0017590:13647-13666 None:intergenic 40.0%
! CAAAACAGTAAGGGTGTGTT+TGG - tig0017590:13655-13674 None:intergenic 40.0%
! CAAACACACCCTTACTGTTT+TGG + tig0017590:13653-13672 Msa1361670:intron 40.0%
GCTATCAGCCAAAACAGTAA+GGG - tig0017590:13664-13683 None:intergenic 40.0%
AGCTATCAGCCAAAACAGTA+AGG - tig0017590:13665-13684 None:intergenic 40.0%
! CTCAAAACAAGCTGGTTTCT+TGG + tig0017590:13923-13942 Msa1361670:CDS 40.0%
!! ACTAGCTTTGACACGATAAG+CGG + tig0017590:13948-13967 Msa1361670:CDS 40.0%
GCTTAACAGCCAATTATTCC+AGG + tig0017590:14066-14085 Msa1361670:intron 40.0%
!!! CATTTTATCGGTTCAGGTTC+CGG + tig0017590:14353-14372 Msa1361670:intron 40.0%
TATGATAGCACCATTTGGAC+CGG - tig0017590:14375-14394 None:intergenic 40.0%
AGTGGTGCTCAATATGTTGA+TGG + tig0017590:14458-14477 Msa1361670:CDS 40.0%
CACTCTTTCTCTCTAGTTGT+TGG - tig0017590:14521-14540 None:intergenic 40.0%
GTATGATACCTGCAAAACTC+GGG - tig0017590:14549-14568 None:intergenic 40.0%
CATTTGCACGATCCTTTCTT+TGG + tig0017590:14817-14836 Msa1361670:CDS 40.0%
! CGATCCTTTCTTTGGAAAGT+TGG + tig0017590:14825-14844 Msa1361670:CDS 40.0%
AAGCCCAACTTTCCAAAGAA+AGG - tig0017590:14832-14851 None:intergenic 40.0%
AATGAAAAACATCCCACCAC+TGG - tig0017590:14882-14901 None:intergenic 40.0%
ATCTATATAGGAACTGGGCA+TGG + tig0017590:14956-14975 Msa1361670:intron 40.0%
GCTGCATTGAATGTTCATGA+AGG + tig0017590:14986-15005 Msa1361670:CDS 40.0%
AACGGTAACTGATACCTTGA+GGG - tig0017590:15012-15031 None:intergenic 40.0%
TAACGGTAACTGATACCTTG+AGG - tig0017590:15013-15032 None:intergenic 40.0%
! CAAGGTATCAGTTACCGTTA+TGG + tig0017590:15013-15032 Msa1361670:CDS 40.0%
GAGGGGTCAAATTTCCATAA+CGG - tig0017590:15030-15049 None:intergenic 40.0%
AATTTGACCCCTCTAGTGAA+TGG + tig0017590:15037-15056 Msa1361670:CDS 40.0%
AATCATGCCATTCACTAGAG+GGG - tig0017590:15047-15066 None:intergenic 40.0%
CAATCATGCCATTCACTAGA+GGG - tig0017590:15048-15067 None:intergenic 40.0%
ACAATCATGCCATTCACTAG+AGG - tig0017590:15049-15068 None:intergenic 40.0%
GATCAAGTAGGATGGTATCT+GGG - tig0017590:15502-15521 None:intergenic 40.0%
TGATCAAGTAGGATGGTATC+TGG - tig0017590:15503-15522 None:intergenic 40.0%
! AACTTGGTGATCAAGTAGGA+TGG - tig0017590:15510-15529 None:intergenic 40.0%
GCTATATCTCTAGGCAATGT+TGG - tig0017590:15658-15677 None:intergenic 40.0%
ACTACACGTGCTATATCTCT+AGG - tig0017590:15667-15686 None:intergenic 40.0%
!!! AAACCGGCTTTTAAGGTGAT+GGG - tig0017590:15707-15726 None:intergenic 40.0%
!!! AAAACCGGCTTTTAAGGTGA+TGG - tig0017590:15708-15727 None:intergenic 40.0%
! CTTCTTTTCTGCCAAACTGT+GGG + tig0017590:15768-15787 Msa1361670:intron 40.0%
! TTCTTTTCTGCCAAACTGTG+GGG + tig0017590:15769-15788 Msa1361670:intron 40.0%
! GTTGAGACACCAAATCGTTT+TGG + tig0017590:15871-15890 Msa1361670:CDS 40.0%
TGACTTCCTCCAAAACGATT+TGG - tig0017590:15883-15902 None:intergenic 40.0%
TTTGGAGGAAGTCAATACCT+AGG + tig0017590:15889-15908 Msa1361670:CDS 40.0%
TCATGTTGAACTACGAACAG+GGG - tig0017590:16043-16062 None:intergenic 40.0%
CTCATGTTGAACTACGAACA+GGG - tig0017590:16044-16063 None:intergenic 40.0%
!! GGATCTGATGTGTTACTTTC+AGG + tig0017590:16382-16401 Msa1361670:intron 40.0%
TCACACACTCATTTGTAACC+TGG + tig0017590:16469-16488 Msa1361670:intron 40.0%
CACACACTCATTTGTAACCT+GGG + tig0017590:16470-16489 Msa1361670:intron 40.0%
TTTATCTGCAAGTTATGCCC+AGG - tig0017590:16490-16509 None:intergenic 40.0%
TATCGACAACAGAGATCGAT+TGG + tig0017590:16530-16549 Msa1361670:CDS 40.0%
ACAACTACCACTCAGTAGTA+TGG + tig0017590:16557-16576 Msa1361670:CDS 40.0%
CAACTACCACTCAGTAGTAT+GGG + tig0017590:16558-16577 Msa1361670:CDS 40.0%
CATGGAGACGTGTAAAAGAT+AGG - tig0017590:16648-16667 None:intergenic 40.0%
!!! GCCCTTTTGTTGTTCATTTG+GGG - tig0017590:16857-16876 None:intergenic 40.0%
!!! GGCCCTTTTGTTGTTCATTT+GGG - tig0017590:16858-16877 None:intergenic 40.0%
ATGCAAGAGGTGAAAACTCT+TGG - tig0017590:16998-17017 None:intergenic 40.0%
ATATGCCATGTAACGGTCAT+AGG + tig0017590:17103-17122 Msa1361670:intron 40.0%
AAGTTTATGTGCCCTACGAA+AGG - tig0017590:17185-17204 None:intergenic 40.0%
TAAGGAAGCAGGGAAAACAA+GGG - tig0017590:17212-17231 None:intergenic 40.0%
TTAAGGAAGCAGGGAAAACA+AGG - tig0017590:17213-17232 None:intergenic 40.0%
TAAAAGGAAAAGCAGCAGCT+CGG - tig0017590:17276-17295 None:intergenic 40.0%
AACTACTTTGATGCATCCAC+AGG + tig0017590:17354-17373 Msa1361670:intron 40.0%
!! AATGGCTTTGGAACAACACT+CGG + tig0017590:17407-17426 Msa1361670:CDS 40.0%
TGATGCTTCAGTGATGCAAA+TGG - tig0017590:17672-17691 None:intergenic 40.0%
ACTGAAGTGTGCTTGCTTTA+TGG + tig0017590:17691-17710 Msa1361670:three_prime_UTR 40.0%
!!! GCGAGTTTTGTTACAGTTGC+AGG - tig0017590:10799-10818 None:intergenic 45.0%
ATTGAGATTGAGGAAGGAGG+AGG - tig0017590:10839-10858 None:intergenic 45.0%
GAGATTGAGATTGAGGAAGG+AGG - tig0017590:10842-10861 None:intergenic 45.0%
CAATTGCGGATGGAGAAGAA+AGG - tig0017590:10907-10926 None:intergenic 45.0%
! AACTGGAAGAGGTGCAATTG+CGG - tig0017590:10921-10940 None:intergenic 45.0%
!! TGGTTTTGCGGAAATGGAAC+TGG - tig0017590:10938-10957 None:intergenic 45.0%
TAAGCGTCAATGGAGACATC+GGG - tig0017590:11042-11061 None:intergenic 45.0%
GTAAGCGTCAATGGAGACAT+CGG - tig0017590:11043-11062 None:intergenic 45.0%
AGCACGCATGAGAATCCAAT+TGG - tig0017590:11339-11358 None:intergenic 45.0%
AATTGGATTCTCATGCGTGC+TGG + tig0017590:11338-11357 Msa1361670:CDS 45.0%
TCACTAGTAGTAGGTACTCC+TGG - tig0017590:11368-11387 None:intergenic 45.0%
GAGTACCTACTACTAGTGAG+TGG + tig0017590:11369-11388 Msa1361670:CDS 45.0%
TTGAGCCACTCACTAGTAGT+AGG - tig0017590:11377-11396 None:intergenic 45.0%
TACTAGTGAGTGGCTCAATG+AGG + tig0017590:11379-11398 Msa1361670:CDS 45.0%
! TGAGTGGCTCAATGAGGTTT+TGG + tig0017590:11385-11404 Msa1361670:CDS 45.0%
ACAGAACATAACACCCTGTC+AGG - tig0017590:11899-11918 None:intergenic 45.0%
CGTCGAAATTGTCATCTCTG+AGG + tig0017590:12113-12132 Msa1361670:CDS 45.0%
! TCTGAGGTCTGAACTTGTTC+AGG + tig0017590:12129-12148 Msa1361670:CDS 45.0%
AACAGTGAAAAACAGAGGGG+GGG - tig0017590:12359-12378 None:intergenic 45.0%
CAACAGTGAAAAACAGAGGG+GGG - tig0017590:12360-12379 None:intergenic 45.0%
GCATACACAACAGGTGAATG+TGG - tig0017590:12442-12461 None:intergenic 45.0%
CCTATCTACTGTACCCTTCT+TGG - tig0017590:12675-12694 None:intergenic 45.0%
! CCAAGAAGGGTACAGTAGAT+AGG + tig0017590:12672-12691 Msa1361670:intron 45.0%
!! GGAAGTATCCAACAAAAGGG+CGG - tig0017590:12828-12847 None:intergenic 45.0%
! TCTGTCGCATGCAGCTTTAT+AGG - tig0017590:12876-12895 None:intergenic 45.0%
! AGGATTTCTGGACAGCAATG+GGG - tig0017590:12973-12992 None:intergenic 45.0%
! GAGGATTTCTGGACAGCAAT+GGG - tig0017590:12974-12993 None:intergenic 45.0%
TGGCCTTTGCTAGAGAAACA+GGG - tig0017590:12997-13016 None:intergenic 45.0%
ATGGCCTTTGCTAGAGAAAC+AGG - tig0017590:12998-13017 None:intergenic 45.0%
!! CATCATTTTTCCAGGGTAGG+TGG + tig0017590:13300-13319 Msa1361670:intron 45.0%
!! TCATTTTTCCAGGGTAGGTG+GGG + tig0017590:13302-13321 Msa1361670:intron 45.0%
TTAGGGTGTGTTTGGATGGA+GGG + tig0017590:13418-13437 Msa1361670:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + tig0017590:13424-13443 Msa1361670:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + tig0017590:13428-13447 Msa1361670:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - tig0017590:13636-13655 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - tig0017590:13638-13657 None:intergenic 45.0%
! GTAAGGGTGTGTTTGGATTG+AGG - tig0017590:13648-13667 None:intergenic 45.0%
GAGTTTCGCTCAAAACAAGC+TGG + tig0017590:13915-13934 Msa1361670:CDS 45.0%
! GTACTACAACTCTCTGGTTC+TGG - tig0017590:14407-14426 None:intergenic 45.0%
ACCAGAGAGTTGTAGTACTG+TGG + tig0017590:14409-14428 Msa1361670:CDS 45.0%
TCCACAGTACTACAACTCTC+TGG - tig0017590:14413-14432 None:intergenic 45.0%
ATGGCACGACTGACATTACA+CGG + tig0017590:14477-14496 Msa1361670:CDS 45.0%
GATCAAGAGCTATATGACCC+TGG - tig0017590:14755-14774 None:intergenic 45.0%
GGGTCATATAGCTCTTGATC+AGG + tig0017590:14755-14774 Msa1361670:intron 45.0%
!! ACAAAACCAGGGGTATCTTC+CGG - tig0017590:14789-14808 None:intergenic 45.0%
ATGCATCCAGCACAAAACCA+GGG - tig0017590:14800-14819 None:intergenic 45.0%
AATGCATCCAGCACAAAACC+AGG - tig0017590:14801-14820 None:intergenic 45.0%
AATGTTCATGAAGGCCCTCA+AGG + tig0017590:14995-15014 Msa1361670:CDS 45.0%
GCATGGTCTTCATAATAGCC+AGG - tig0017590:15082-15101 None:intergenic 45.0%
AAGACCATGCTTTCGGCATT+CGG + tig0017590:15092-15111 Msa1361670:CDS 45.0%
!! CTATTTCTAGAGTTCCTCGC+TGG + tig0017590:15329-15348 Msa1361670:intron 45.0%
! TCCTCGCTGGTTAATATGCT+CGG + tig0017590:15342-15361 Msa1361670:intron 45.0%
CTTAAGACACTCATGACTCG+TGG - tig0017590:15400-15419 None:intergenic 45.0%
CGAGTCATGAGTGTCTTAAG+AGG + tig0017590:15400-15419 Msa1361670:intron 45.0%
TGGAAATTCCGCCTTCAATG+CGG + tig0017590:15539-15558 Msa1361670:intron 45.0%
TCCAACACGTTCCTTGTGTT+GGG + tig0017590:15612-15631 Msa1361670:intron 45.0%
TTCCTTGTGTTGGGTGTGAA+GGG + tig0017590:15621-15640 Msa1361670:intron 45.0%
ACACCCATCACCTTAAAAGC+CGG + tig0017590:15701-15720 Msa1361670:intron 45.0%
!! TTGGGCAAAACCGGCTTTTA+AGG - tig0017590:15714-15733 None:intergenic 45.0%
CCACAGTTTGGCAGAAAAGA+AGG - tig0017590:15770-15789 None:intergenic 45.0%
! CCTTCTTTTCTGCCAAACTG+TGG + tig0017590:15767-15786 Msa1361670:intron 45.0%
! GAGACACCAAATCGTTTTGG+AGG + tig0017590:15874-15893 Msa1361670:CDS 45.0%
AGCCATTGGCATACCTGAAT+GGG - tig0017590:15937-15956 None:intergenic 45.0%
CCTCATGTTGAACTACGAAC+AGG - tig0017590:16045-16064 None:intergenic 45.0%
CCTGTTCGTAGTTCAACATG+AGG + tig0017590:16042-16061 Msa1361670:intron 45.0%
TGGTCCAACAGAAGTTCTCT+AGG + tig0017590:16124-16143 Msa1361670:intron 45.0%
! CCTTTTCCCATACTACTGAG+TGG - tig0017590:16567-16586 None:intergenic 45.0%
CCACTCAGTAGTATGGGAAA+AGG + tig0017590:16564-16583 Msa1361670:CDS 45.0%
GAAACGGAAGAATAAGGAGG+TGG - tig0017590:16706-16725 None:intergenic 45.0%
! TGTTCATTTGGGGTAAAGGG+TGG - tig0017590:16847-16866 None:intergenic 45.0%
!!! GGGCCCTTTTGTTGTTCATT+TGG - tig0017590:16859-16878 None:intergenic 45.0%
TTAGCCCAATCTCGTATCAG+GGG - tig0017590:16903-16922 None:intergenic 45.0%
CTTAGCCCAATCTCGTATCA+GGG - tig0017590:16904-16923 None:intergenic 45.0%
ACTTAGCCCAATCTCGTATC+AGG - tig0017590:16905-16924 None:intergenic 45.0%
CAGTATATCCACCTGTGTAG+CGG + tig0017590:17142-17161 Msa1361670:intron 45.0%
ATGATAATCCGCTACACAGG+TGG - tig0017590:17153-17172 None:intergenic 45.0%
GTCATGATAATCCGCTACAC+AGG - tig0017590:17156-17175 None:intergenic 45.0%
! GAGTGTTGTTCCAAAGCCAT+TGG - tig0017590:17408-17427 None:intergenic 45.0%
!!! TTTTAAAAATAAAAACATTT+TGG - tig0017590:12698-12717 None:intergenic 5.0%
!!! AATTTTATATTTTAAAGAAA+CGG - tig0017590:16722-16741 None:intergenic 5.0%
TTGCGGATGGAGAAGAAAGG+AGG - tig0017590:10904-10923 None:intergenic 50.0%
TGCGGAAATGGAACTGGAAG+AGG - tig0017590:10932-10951 None:intergenic 50.0%
TTTGGAGAAGAGACGACGGA+GGG - tig0017590:11019-11038 None:intergenic 50.0%
GTCAATGGAGACATCGGGTT+TGG - tig0017590:11037-11056 None:intergenic 50.0%
TCTGGTGAGCGTCTTGAGAA+GGG - tig0017590:11071-11090 None:intergenic 50.0%
ATTCAGCGATGAACTCGCTC+TGG - tig0017590:11089-11108 None:intergenic 50.0%
!!! TCTGGTTTTACTGGCAGTGC+TGG + tig0017590:11132-11151 Msa1361670:CDS 50.0%
! CCAAAGAGCGGCTTTATCGT+TGG - tig0017590:11172-11191 None:intergenic 50.0%
CCAACGATAAAGCCGCTCTT+TGG + tig0017590:11169-11188 Msa1361670:CDS 50.0%
AAAGCCGCTCTTTGGACTGA+TGG + tig0017590:11177-11196 Msa1361670:CDS 50.0%
! TGATGGTCGCTACTTTCTCC+AGG + tig0017590:11194-11213 Msa1361670:CDS 50.0%
TCAATGCCAACTCTAGCACC+TGG - tig0017590:11413-11432 None:intergenic 50.0%
ACAGGCTTATTTGGAGGCTC+CGG - tig0017590:12055-12074 None:intergenic 50.0%
! AGGTCTGAACTTGTTCAGGC+TGG + tig0017590:12133-12152 Msa1361670:CDS 50.0%
CCACGCAATTTCATCAAGCG+CGG - tig0017590:12179-12198 None:intergenic 50.0%
TCTTTCAGTTTGGCAGCACG+AGG + tig0017590:12800-12819 Msa1361670:intron 50.0%
! GGAGGATTTCTGGACAGCAA+TGG - tig0017590:12975-12994 None:intergenic 50.0%
GAGAAACAGGGGAGGATTTC+TGG - tig0017590:12985-13004 None:intergenic 50.0%
CTTTGCTAGAGAAACAGGGG+AGG - tig0017590:12993-13012 None:intergenic 50.0%
! CTCCCCTGTTTCTCTAGCAA+AGG + tig0017590:12991-13010 Msa1361670:CDS 50.0%
GGCCTTTGCTAGAGAAACAG+GGG - tig0017590:12996-13015 None:intergenic 50.0%
! CATTTTTCCAGGGTAGGTGG+GGG + tig0017590:13303-13322 Msa1361670:intron 50.0%
CTTAGGGTGTGTTTGGATGG+AGG + tig0017590:13417-13436 Msa1361670:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + tig0017590:13427-13446 Msa1361670:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + tig0017590:13429-13448 Msa1361670:intron 50.0%
TGGATTGAGGGTTTAGGAGG+GGG - tig0017590:13635-13654 None:intergenic 50.0%
CCAATCCCAGAACTGAGCAA+GGG - tig0017590:13832-13851 None:intergenic 50.0%
! GGGAAGATGAGTTGGACCAA+AGG - tig0017590:14315-14334 None:intergenic 50.0%
AGGTCTAGGGGAAGATGAGT+TGG - tig0017590:14323-14342 None:intergenic 50.0%
! GTGTTTCACCCGAGTTTTGC+AGG + tig0017590:14538-14557 Msa1361670:CDS 50.0%
TCTTGATCAGGCAGTCTTCC+CGG + tig0017590:14767-14786 Msa1361670:CDS 50.0%
!! CAAAACCAGGGGTATCTTCC+GGG - tig0017590:14788-14807 None:intergenic 50.0%
!!! AGATACCCCTGGTTTTGTGC+TGG + tig0017590:14791-14810 Msa1361670:CDS 50.0%
TGCATCCAGCACAAAACCAG+GGG - tig0017590:14799-14818 None:intergenic 50.0%
GGAAAGTTGGGCTTGACTAC+AGG + tig0017590:14838-14857 Msa1361670:CDS 50.0%
ATAGGAACTGGGCATGGTGT+AGG + tig0017590:14962-14981 Msa1361670:intron 50.0%
CAATCCGAATGCCGAAAGCA+TGG - tig0017590:15099-15118 None:intergenic 50.0%
TGCTTTCGGCATTCGGATTG+AGG + tig0017590:15099-15118 Msa1361670:CDS 50.0%
ACCGAGCATATTAACCAGCG+AGG - tig0017590:15346-15365 None:intergenic 50.0%
AGACACTCATGACTCGTGGA+AGG - tig0017590:15396-15415 None:intergenic 50.0%
CAACACAAGGAACGTGTTGG+AGG - tig0017590:15613-15632 None:intergenic 50.0%
CTCCAACACGTTCCTTGTGT+TGG + tig0017590:15611-15630 Msa1361670:intron 50.0%
ACCCAACACAAGGAACGTGT+TGG - tig0017590:15616-15635 None:intergenic 50.0%
GTTCCTTGTGTTGGGTGTGA+AGG + tig0017590:15620-15639 Msa1361670:intron 50.0%
TCCTTGTGTTGGGTGTGAAG+GGG + tig0017590:15622-15641 Msa1361670:intron 50.0%
GCTTACATACGTGCCCATTC+AGG + tig0017590:15921-15940 Msa1361670:CDS 50.0%
TGCCCATTCAGGTATGCCAA+TGG + tig0017590:15932-15951 Msa1361670:intron 50.0%
CAGCCATTGGCATACCTGAA+TGG - tig0017590:15938-15957 None:intergenic 50.0%
TGGGCCTAGAGAACTTCTGT+TGG - tig0017590:16131-16150 None:intergenic 50.0%
TGCCAAAGAGAGAGGATGGT+CGG - tig0017590:16813-16832 None:intergenic 50.0%
GACATGCCAAAGAGAGAGGA+TGG - tig0017590:16817-16836 None:intergenic 50.0%
CATGGACATGCCAAAGAGAG+AGG - tig0017590:16821-16840 None:intergenic 50.0%
CTCTCTCTTTGGCATGTCCA+TGG + tig0017590:16819-16838 Msa1361670:intron 50.0%
CCATCCCCTGATACGAGATT+GGG + tig0017590:16896-16915 Msa1361670:intron 50.0%
CCTAGCCTATGACCGTTACA+TGG - tig0017590:17111-17130 None:intergenic 50.0%
CCATGTAACGGTCATAGGCT+AGG + tig0017590:17108-17127 Msa1361670:intron 50.0%
TGTAACGGTCATAGGCTAGG+TGG + tig0017590:17111-17130 Msa1361670:intron 50.0%
CACAGGTGGATATACTGCCA+TGG - tig0017590:17139-17158 None:intergenic 50.0%
AAAAGCAGCAGCTCGGAGTA+AGG - tig0017590:17269-17288 None:intergenic 50.0%
TCCACAGGTTTCACCATTGC+TGG + tig0017590:17369-17388 Msa1361670:intron 50.0%
TCCAGCAATGGTGAAACCTG+TGG - tig0017590:17373-17392 None:intergenic 50.0%
CAGGTTTCACCATTGCTGGA+TGG + tig0017590:17373-17392 Msa1361670:intron 50.0%
ATAGGTAAGACTAGCACGCC+AGG - tig0017590:17533-17552 None:intergenic 50.0%
!! GGAGGAGGAGTGGATTGAGA+GGG - tig0017590:10821-10840 None:intergenic 55.0%
!! AGGAGGAGGAGTGGATTGAG+AGG - tig0017590:10822-10841 None:intergenic 55.0%
GAGATTGAGGAAGGAGGAGG+AGG - tig0017590:10836-10855 None:intergenic 55.0%
! GGAAGAGGTGCAATTGCGGA+TGG - tig0017590:10917-10936 None:intergenic 55.0%
GTTTGGAGAAGAGACGACGG+AGG - tig0017590:11020-11039 None:intergenic 55.0%
CGGGTTTGGAGAAGAGACGA+CGG - tig0017590:11023-11042 None:intergenic 55.0%
CTCTGGTGAGCGTCTTGAGA+AGG - tig0017590:11072-11091 None:intergenic 55.0%
GCGACCATCAGTCCAAAGAG+CGG - tig0017590:11184-11203 None:intergenic 55.0%
CTCATGCGTGCTGGAAATCC+AGG + tig0017590:11347-11366 Msa1361670:CDS 55.0%
!! CTCAATGAGGTTTTGGCGCC+AGG + tig0017590:11392-11411 Msa1361670:CDS 55.0%
CCGCGCTTGATGAAATTGCG+TGG + tig0017590:12176-12195 Msa1361670:CDS 55.0%
AGGGTTTAGGAGGGGAAGAG+AGG + tig0017590:13437-13456 Msa1361670:intron 55.0%
GGGTTTAGGAGGGGAAGAGA+GGG + tig0017590:13438-13457 Msa1361670:intron 55.0%
GGTTTAGGAGGGGAAGAGAG+GGG + tig0017590:13439-13458 Msa1361670:intron 55.0%
TTGAGGGTTTAGGAGGGGGA+GGG - tig0017590:13631-13650 None:intergenic 55.0%
ATTGAGGGTTTAGGAGGGGG+AGG - tig0017590:13632-13651 None:intergenic 55.0%
TGCTGCCCTTGCTCAGTTCT+GGG + tig0017590:13824-13843 Msa1361670:CDS 55.0%
!! CCCTTGCTCAGTTCTGGGAT+TGG + tig0017590:13829-13848 Msa1361670:CDS 55.0%
GCCAATCCCAGAACTGAGCA+AGG - tig0017590:13833-13852 None:intergenic 55.0%
! GGTTCAGGTTCCGGTCCAAA+TGG + tig0017590:14362-14381 Msa1361670:intron 55.0%
GTTGGGCTTGACTACAGGCA+TGG + tig0017590:14843-14862 Msa1361670:CDS 55.0%
CTAGTTGTGGGCCGCATTGA+AGG - tig0017590:15553-15572 None:intergenic 55.0%
ACCCCTTCACACCCAACACA+AGG - tig0017590:15626-15645 None:intergenic 55.0%
TGTGTTGGGTGTGAAGGGGT+AGG + tig0017590:15626-15645 Msa1361670:intron 55.0%
CCAGGGTGATTGACAGCCAT+TGG - tig0017590:15951-15970 None:intergenic 55.0%
CCAATGGCTGTCAATCACCC+TGG + tig0017590:15948-15967 Msa1361670:intron 55.0%
! GTAGGGATCTGGGACTGACT+TGG + tig0017590:16104-16123 Msa1361670:intron 55.0%
CAAAGAGAGAGGATGGTCGG+AGG - tig0017590:16810-16829 None:intergenic 55.0%
CTCCGACCATCCTCTCTCTT+TGG + tig0017590:16808-16827 Msa1361670:intron 55.0%
TGGGGTAAAGGGTGGTTCCA+TGG - tig0017590:16839-16858 None:intergenic 55.0%
TGGCCATACTGCACGATGCA+GGG - tig0017590:16879-16898 None:intergenic 55.0%
ATGGCCATACTGCACGATGC+AGG - tig0017590:16880-16899 None:intergenic 55.0%
GCCATCCCCTGATACGAGAT+TGG + tig0017590:16895-16914 Msa1361670:intron 55.0%
CCCAATCTCGTATCAGGGGA+TGG - tig0017590:16899-16918 None:intergenic 55.0%
TCATAGGCTAGGTGGCACCA+TGG + tig0017590:17119-17138 Msa1361670:intron 55.0%
TGAGGAAGGAGGAGGAGGAG+TGG - tig0017590:10831-10850 None:intergenic 60.0%
CGGAGTCGGAATCTGCGGAA+CGG - tig0017590:10981-11000 None:intergenic 60.0%
! GGTGAGTTTGGGGTCGGAGT+CGG - tig0017590:10995-11014 None:intergenic 60.0%
! CTGTGTGGCAGTGTCGAGTC+AGG - tig0017590:11256-11275 None:intergenic 60.0%
TTGGCGCCAGGTGCTAGAGT+TGG + tig0017590:11404-11423 Msa1361670:CDS 60.0%
!!! ACGAGGTGCCGCCCTTTTGT+TGG + tig0017590:12817-12836 Msa1361670:CDS 60.0%
CAACAAACCCCCACCTACCC+TGG - tig0017590:13313-13332 None:intergenic 60.0%
TTAGGAGGGGAAGAGAGGGG+AGG + tig0017590:13442-13461 Msa1361670:intron 60.0%
TAGGAGGGGAAGAGAGGGGA+GGG + tig0017590:13443-13462 Msa1361670:intron 60.0%
CTGCTGCCCTTGCTCAGTTC+TGG + tig0017590:13823-13842 Msa1361670:CDS 60.0%
GTCTTCCCGGAAGATACCCC+TGG + tig0017590:14780-14799 Msa1361670:CDS 60.0%
GTTGTGGGCCGCATTGAAGG+CGG - tig0017590:15550-15569 None:intergenic 60.0%
CGTGTTGGAGGCTGCGATGA+AGG - tig0017590:15601-15620 None:intergenic 60.0%
CGAGCAGAGCCATCCAGCAA+TGG - tig0017590:17385-17404 None:intergenic 60.0%
! TGGATGGCTCTGCTCGCCAA+TGG + tig0017590:17389-17408 Msa1361670:CDS 60.0%
GCTCTGCTCGCCAATGGCTT+TGG + tig0017590:17395-17414 Msa1361670:CDS 60.0%
GGGGTCGGAGTCGGAATCTG+CGG - tig0017590:10986-11005 None:intergenic 65.0%
! GAGGGCGGTGAGTTTGGGGT+CGG - tig0017590:11001-11020 None:intergenic 65.0%
GACGGAGGGCGGTGAGTTTG+GGG - tig0017590:11005-11024 None:intergenic 65.0%
CGACGGAGGGCGGTGAGTTT+GGG - tig0017590:11006-11025 None:intergenic 65.0%
ACGACGGAGGGCGGTGAGTT+TGG - tig0017590:11007-11026 None:intergenic 65.0%
GGAGAAGAGACGACGGAGGG+CGG - tig0017590:11016-11035 None:intergenic 65.0%
GGTTTAGGAGGGGGAGGGAG+GGG - tig0017590:13626-13645 None:intergenic 65.0%
GGGTTTAGGAGGGGGAGGGA+GGG - tig0017590:13627-13646 None:intergenic 65.0%
AGGGTTTAGGAGGGGGAGGG+AGG - tig0017590:13628-13647 None:intergenic 65.0%
GGGCCCTGCATCGTGCAGTA+TGG + tig0017590:16873-16892 Msa1361670:intron 65.0%
GGCACCTGTGCTCATCGCTC+TGG + tig0017590:17477-17496 Msa1361670:three_prime_UTR 65.0%
CACGCCAGAGCGATGAGCAC+AGG - tig0017590:17484-17503 None:intergenic 65.0%
TAGGAGGGGGAGGGAGGGGA+GGG - tig0017590:13622-13641 None:intergenic 70.0%
TTAGGAGGGGGAGGGAGGGG+AGG - tig0017590:13623-13642 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0017590 gene 10577 17797 10577 ID=Msa1361670;Name=Msa1361670
tig0017590 mRNA 10577 17797 10577 ID=Msa1361670-mRNA-1;Parent=Msa1361670;Name=Msa1361670-mRNA-1;_AED=0.09;_eAED=0.09;_QI=79|0.92|0.85|1|0.84|0.71|14|309|725
tig0017590 exon 10577 10627 10577 ID=Msa1361670-mRNA-1:exon:12569;Parent=Msa1361670-mRNA-1
tig0017590 exon 10738 11215 10738 ID=Msa1361670-mRNA-1:exon:12570;Parent=Msa1361670-mRNA-1
tig0017590 exon 11317 11440 11317 ID=Msa1361670-mRNA-1:exon:12571;Parent=Msa1361670-mRNA-1
tig0017590 exon 11894 12210 11894 ID=Msa1361670-mRNA-1:exon:12572;Parent=Msa1361670-mRNA-1
tig0017590 exon 12424 12596 12424 ID=Msa1361670-mRNA-1:exon:12573;Parent=Msa1361670-mRNA-1
tig0017590 exon 12808 13062 12808 ID=Msa1361670-mRNA-1:exon:12574;Parent=Msa1361670-mRNA-1
tig0017590 exon 13818 13969 13818 ID=Msa1361670-mRNA-1:exon:12575;Parent=Msa1361670-mRNA-1
tig0017590 exon 14369 14559 14369 ID=Msa1361670-mRNA-1:exon:12576;Parent=Msa1361670-mRNA-1
tig0017590 exon 14756 14864 14756 ID=Msa1361670-mRNA-1:exon:12577;Parent=Msa1361670-mRNA-1
tig0017590 exon 14966 15120 14966 ID=Msa1361670-mRNA-1:exon:12578;Parent=Msa1361670-mRNA-1
tig0017590 exon 15850 15942 15850 ID=Msa1361670-mRNA-1:exon:12579;Parent=Msa1361670-mRNA-1
tig0017590 exon 16505 16585 16505 ID=Msa1361670-mRNA-1:exon:12580;Parent=Msa1361670-mRNA-1
tig0017590 exon 17376 17498 17376 ID=Msa1361670-mRNA-1:exon:12581;Parent=Msa1361670-mRNA-1
tig0017590 exon 17534 17797 17534 ID=Msa1361670-mRNA-1:exon:12582;Parent=Msa1361670-mRNA-1
tig0017590 five_prime_UTR 10577 10627 10577 ID=Msa1361670-mRNA-1:five_prime_utr;Parent=Msa1361670-mRNA-1
tig0017590 five_prime_UTR 10738 10765 10738 ID=Msa1361670-mRNA-1:five_prime_utr;Parent=Msa1361670-mRNA-1
tig0017590 CDS 10766 11215 10766 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 11317 11440 11317 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 11894 12210 11894 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 12424 12596 12424 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 12808 13062 12808 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 13818 13969 13818 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 14369 14559 14369 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 14756 14864 14756 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 14966 15120 14966 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 15850 15942 15850 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 16505 16585 16505 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 CDS 17376 17453 17376 ID=Msa1361670-mRNA-1:cds;Parent=Msa1361670-mRNA-1
tig0017590 three_prime_UTR 17454 17498 17454 ID=Msa1361670-mRNA-1:three_prime_utr;Parent=Msa1361670-mRNA-1
tig0017590 three_prime_UTR 17534 17797 17534 ID=Msa1361670-mRNA-1:three_prime_utr;Parent=Msa1361670-mRNA-1
Gene Sequence

>Msa1361670

ATGAATATGAGGTCGCTGTCATCATCATCACCTGCAACTGTAACAAAACTCGCCCTCTCAATCCACTCCTCCTCCTCCTTCCTCAATCTCAATCTCAATCTCAATCCATTTTTCAAATCCAATAAACATAACAAACCTCCTTTCTTCTCCATCCGCAATTGCACCTCTTCCAGTTCCATTTCCGCAAAACCATCTTCTCAACTCCGTAAAAACCGTTCCGCAGATTCCGACTCCGACCCCAAACTCACCGCCCTCCGTCGTCTCTTCTCCAAACCCGATGTCTCCATTGACGCTTACATTATCCCTTCTCAAGACGCTCACCAGAGCGAGTTCATCGCTGAATGTTACGGTAGAAGACAATACATATCTGGTTTTACTGGCAGTGCTGGAACTGCTGTTGTTACCAACGATAAAGCCGCTCTTTGGACTGATGGTCGCTACTTTCTCCAGGCAGAGAAGCAACTGAACTCCAATTGGATTCTCATGCGTGCTGGAAATCCAGGAGTACCTACTACTAGTGAGTGGCTCAATGAGGTTTTGGCGCCAGGTGCTAGAGTTGGCATTGATCCTGTTATGCCTGACAGGGTGTTATGTTCTGTATTGTTAAGGAGGCAGTTTCTTTTTACTTCGGATGCTGCTGAAGAACTTAAACATGTTATCTCTAAGAAAAACCATGAGCTCGTTTATTTGTACAATTCAAATCTTGTGGATGAAATATGGAAAGAAGCTAGGCCGGAGCCTCCAAATAAGCCTGTTAGAGTGCATGACCTAAAGTATTCTGGTTTAGATGTTGCGTCGAAATTGTCATCTCTGAGGTCTGAACTTGTTCAGGCTGGTTCATCTGCAATTATTGTCTCCGCGCTTGATGAAATTGCGTGGTTGTTGAACTTGAGAGGCAGTGATATCCCACATTCACCTGTTGTGTATGCATATTTGATTGTGGAGATTGATGGAGCTAAGTTATTTATTGACGATTCAAAAGTTACTGAAGAGGTGGATGACCACTTGAAGAAAGCAAACATAGAGATCAGGCCATACAATTCGATTGTATCCGAGATTGAAAATTTGGCAGCACGAGGTGCCGCCCTTTTGTTGGATACTTCCTCTGTTAATGCTGCTATTGTAAATGCCTATAAAGCTGCATGCGACAGATGTTATCAGAACTATGAGAGTAAACATAAAACTGAGAGCAAAGGTTTTGACAGATCAATTGCGAACTCAGATGTCCCCATTGCTGTCCAGAAATCCTCCCCTGTTTCTCTAGCAAAGGCCATAAAAAATGAAACGGAGCTGAAAGGAATGCAAGATTGTCATTTAAGGGATGCTGCTGCCCTTGCTCAGTTCTGGGATTGGCTAGAGACAGAAATTACCAACGATAGGATATCAACAGAAGTAGAAGTTTCAGACAAACTTCTCGAGTTTCGCTCAAAACAAGCTGGTTTCTTGGATACTAGCTTTGACACGATAAGCGGTTCCGGTCCAAATGGTGCTATCATACACTACAAACCAGAACCAGAGAGTTGTAGTACTGTGGATGCCAATAAATTATTCTTATTGGATAGTGGTGCTCAATATGTTGATGGCACGACTGACATTACACGGACAGTTCATTTTGGCAAGCCAACAACTAGAGAGAAAGAGTGTTTCACCCGAGTTTTGCAGGGTCATATAGCTCTTGATCAGGCAGTCTTCCCGGAAGATACCCCTGGTTTTGTGCTGGATGCATTTGCACGATCCTTTCTTTGGAAAGTTGGGCTTGACTACAGGCATGGAACTGGGCATGGTGTAGGAGCTGCATTGAATGTTCATGAAGGCCCTCAAGGTATCAGTTACCGTTATGGAAATTTGACCCCTCTAGTGAATGGCATGATTGTTAGCAATGAACCTGGCTATTATGAAGACCATGCTTTCGGCATTCGGATTGAGAATCTACTGTATGTGAAAAATGTTGAGACACCAAATCGTTTTGGAGGAAGTCAATACCTAGGATTTGAAAAGCTTACATACGTGCCCATTCAGATAAAATTGGTCGCTGTGTCTCTGCTATCGACAACAGAGATCGATTGGCTTAACAACTACCACTCAGTAGTATGGGAAAAGGTTTCACCATTGCTGGATGGCTCTGCTCGCCAATGGCTTTGGAACAACACTCGGCCTATCATCAGTGAAACAGTTTAA
Protein sequence

>Msa1361670

MNMRSLSSSSPATVTKLALSIHSSSSFLNLNLNLNPFFKSNKHNKPPFFSIRNCTSSSSISAKPSSQLRKNRSADSDSDPKLTALRRLFSKPDVSIDAYIIPSQDAHQSEFIAECYGRRQYISGFTGSAGTAVVTNDKAALWTDGRYFLQAEKQLNSNWILMRAGNPGVPTTSEWLNEVLAPGARVGIDPVMPDRVLCSVLLRRQFLFTSDAAEELKHVISKKNHELVYLYNSNLVDEIWKEARPEPPNKPVRVHDLKYSGLDVASKLSSLRSELVQAGSSAIIVSALDEIAWLLNLRGSDIPHSPVVYAYLIVEIDGAKLFIDDSKVTEEVDDHLKKANIEIRPYNSIVSEIENLAARGAALLLDTSSVNAAIVNAYKAACDRCYQNYESKHKTESKGFDRSIANSDVPIAVQKSSPVSLAKAIKNETELKGMQDCHLRDAAALAQFWDWLETEITNDRISTEVEVSDKLLEFRSKQAGFLDTSFDTISGSGPNGAIIHYKPEPESCSTVDANKLFLLDSGAQYVDGTTDITRTVHFGKPTTREKECFTRVLQGHIALDQAVFPEDTPGFVLDAFARSFLWKVGLDYRHGTGHGVGAALNVHEGPQGISYRYGNLTPLVNGMIVSNEPGYYEDHAFGIRIENLLYVKNVETPNRFGGSQYLGFEKLTYVPIQIKLVAVSLLSTTEIDWLNNYHSVVWEKVSPLLDGSARQWLWNNTRPIISETV*